BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0083.p (658 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775480.1| TPR repeat containing protein [Herbaspirillu... 1357 0.0 ref|YP_003453460.1| TPR repeat-containing protein [Azospirillum ... 344 3e-92 ref|ZP_01385319.1| TPR repeat [Chlorobium ferrooxidans DSM 13031... 341 2e-91 ref|ZP_08869415.1| TPR repeat-containing protein I [Azospirillum... 325 1e-86 ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium e... 325 1e-86 ref|ZP_03127398.1| TPR repeat-containing protein [Chthoniobacter... 321 3e-85 ref|YP_001859985.1| TPR repeat-containing protein [Burkholderia ... 308 2e-81 ref|YP_001991518.1| TPR repeat-containing protein [Rhodopseudomo... 308 2e-81 ref|YP_003908546.1| tetratricopeptide repeat-containing protein ... 303 1e-79 ref|YP_004210192.1| hypothetical protein protein [Acidobacterium... 302 1e-79 >ref|YP_003775480.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ63572.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] Length = 658 Score = 1357 bits (3513), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/658 (100%), Positives = 658/658 (100%) Query: 1 MSTRKNSNKHGKPATPPPKHPLQDLLDVRKALDLLDSRKTDEAKALCMAVLSRNPTLVFA 60 MSTRKNSNKHGKPATPPPKHPLQDLLDVRKALDLLDSRKTDEAKALCMAVLSRNPTLVFA Sbjct: 1 MSTRKNSNKHGKPATPPPKHPLQDLLDVRKALDLLDSRKTDEAKALCMAVLSRNPTLVFA 60 Query: 61 NHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIR 120 NHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIR Sbjct: 61 NHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIR 120 Query: 121 IDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAV 180 IDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAV Sbjct: 121 IDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAV 180 Query: 181 AVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLK 240 AVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLK Sbjct: 181 AVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLK 240 Query: 241 LNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTY 300 LNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTY Sbjct: 241 LNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTY 300 Query: 301 NNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEGWECHESRLVT 360 NNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEGWECHESRLVT Sbjct: 301 NNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEGWECHESRLVT 360 Query: 361 RERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVA 420 RERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVA Sbjct: 361 RERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVA 420 Query: 421 LHVKNPLYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPSVPGGYLS 480 LHVKNPLYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPSVPGGYLS Sbjct: 421 LHVKNPLYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPSVPGGYLS 480 Query: 481 ADPILKSSWGEKIRQLSQSPEKLRVGVVWGGNPEHGNDRHRSIAMDKFATLFQLPNIEFY 540 ADPILKSSWGEKIRQLSQSPEKLRVGVVWGGNPEHGNDRHRSIAMDKFATLFQLPNIEFY Sbjct: 481 ADPILKSSWGEKIRQLSQSPEKLRVGVVWGGNPEHGNDRHRSIAMDKFATLFQLPNIEFY 540 Query: 541 SLQKGKPLDAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHP 600 SLQKGKPLDAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHP Sbjct: 541 SLQKGKPLDAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHP 600 Query: 601 TWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQELVALQQKKAGR 658 TWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQELVALQQKKAGR Sbjct: 601 TWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQELVALQQKKAGR 658 >ref|YP_003453460.1| TPR repeat-containing protein [Azospirillum sp. B510] dbj|BAI76916.1| TPR repeat-containing protein [Azospirillum sp. B510] Length = 588 Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 216/582 (37%), Positives = 306/582 (52%), Gaps = 21/582 (3%) Query: 72 GKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDRDHRASRIG 131 G+ A R+ + P + + + +L G L + + EA L A+ + + + + Sbjct: 18 GRLEMAADIYRQILRVAPRHPDAL-HLMGIALRRRQPLEAARLIREALTQNPELTEAHLN 76 Query: 132 LANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVILKSLELQI 191 L N L + + A + A+ P+ L L L R EA + +++ L Sbjct: 77 LGNVLQDLGRIGDAAACYRRAIALRPDFDLALPGLAFCLRLLGRLGEAATIYRRAVALGP 136 Query: 192 SFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLKLNRIDEAHEHL 251 A + L + Y EA+ ++ A+ LDP A N ++ + +L RI EA Sbjct: 137 EVAETRNGLANCLQDDKRYDEAVSGYRAALALDPFHASAGNNLSIALRELGRIAEAERWQ 196 Query: 252 LRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTYNNIGAIQHDHG 311 R I P A+ LG + + R ++A+ AL D YNN+G + Sbjct: 197 RRAIARDPTFAAAHSSLGIT-LQEAGRLEEAVACQAHALVCDPGFTAAYNNLGNSRQAQN 255 Query: 312 DLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEGWECHESRLVTRERSHVYRLIH 371 L +AI +R+AL L P P A N+ + LLL G EGW +E RL ++ + L Sbjct: 256 RLAEAILQYRRALRLDPASPDAHRNLGIGLLLDGQFSEGWREYEGRLRCKDAPVLADLPK 315 Query: 372 KLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVALHVKNPLYRLF 431 P+W G+ LAGK +LL EQG GDSIQF RY M+ +G RV L V+ L RL Sbjct: 316 ------PRWTGEP-LAGKRVLLHSEQGLGDSIQFCRYAPMIAARGGRVVLGVQPALQRLM 368 Query: 432 QSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPS-VPGGYLSADPILKSSWG 490 + ++ S PL D L+SLP GT T++ IP+ VP YL +P L + W Sbjct: 369 KGVVRPDAILSGSVPLDAFDLHVQLLSLPLLFGT-TLESIPARVP--YLFPEPELAAQWA 425 Query: 491 EKIRQLSQSP-EKLRVGVVWGGNPEHGNDRHRSIAMDKFATLFQLPNIEFYSLQKGKPLD 549 E++ SP + LRVG+VW G+P HGNDR+RS+ ++ FA L +LPN+ +S+QKG P + Sbjct: 426 ERL-----SPHQGLRVGLVWAGSPGHGNDRNRSLRLEAFAALSRLPNLTLFSIQKG-PSE 479 Query: 550 AFKALPP-GLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHPTWVLLPHV 608 A PP G+ + +L + +DFADTAA ANLD++V VDTSV HL GALG PTWVLLP Sbjct: 480 GLAATPPAGMRLISLSAEIRDFADTAAIAANLDVIVCVDTSVAHLCGALGRPTWVLLPFA 539 Query: 609 PDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQELVA 650 PDWRWL R+D+PWYP MRLFRQ DWE VL +V + L A Sbjct: 540 PDWRWLLGRDDTPWYPTMRLFRQNRPGDWEEVLERVEEALRA 581 Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 1/258 (0%) Query: 35 LDSRKTDEAKALCMAVLSRNPTLVFANHARGLVAMHEGKFADAEAYLRKAIEADPENAEY 94 L R+ EA L L++NP L A+ G V G+ DA A R+AI P+ Sbjct: 48 LRRRQPLEAARLIREALTQNPELTEAHLNLGNVLQDLGRIGDAAACYRRAIALRPDFDLA 107 Query: 95 MSNLAGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAYFEDAVK 154 + LA + R+ EA +Y A+ + + +R GLAN L + + +V+ + A+ Sbjct: 108 LPGLAFCLRLLGRLGEAATIYRRAVALGPEVAETRNGLANCLQDDKRYDEAVSGYRAALA 167 Query: 155 REPNAPGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAI 214 +P ++L AL E R EA +++ +FA +H++LG +EA+ Sbjct: 168 LDPFHASAGNNLSIALRELGRIAEAERWQRRAIARDPTFAAAHSSLGITLQEAGRLEEAV 227 Query: 215 ESHKTAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFS 274 A++ DP T A+N + +S NR+ EA R + + P P+A+ LG Sbjct: 228 ACQAHALVCDPGFTAAYNNLGNSRQAQNRLAEAILQYRRALRLDPASPDAHRNLGIGLL- 286 Query: 275 TSDRFDDAMRMFNKALEV 292 +F + R + L Sbjct: 287 LDGQFSEGWREYEGRLRC 304 >ref|ZP_01385319.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] gb|EAT59686.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] Length = 654 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 222/646 (34%), Positives = 323/646 (50%), Gaps = 48/646 (7%) Query: 39 KTDEAKALCMAVLSRNPTLVFANHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNL 98 + ++A AL +VLSRNP A H G++A G A +++A+E DP + ++NL Sbjct: 16 RFEDAFALYQSVLSRNPLHFDALHLSGVIAAQTGDLLRAAELIKRALEIDPRHINALNNL 75 Query: 99 AGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPN 158 + R++ AI +++ A+ ++ H A ALH+ E +V F A+ +P+ Sbjct: 76 GYVLRGLGRMESAIEMHDRALLLESGHADHWYNRALALHDLARFEEAVGSFRQALSLKPD 135 Query: 159 APGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHK 218 + LG AL R+ EA+ +S+ L S A +H G A + +E + E + S + Sbjct: 136 FADAWNMLGAALNALTRHEEALECYERSIALNPSTAAAHNNRGVALNDLERFAEGLRSCE 195 Query: 219 TAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLL-------------------------- 252 A+ L D A N A S + L+R +EA + Sbjct: 196 QALALHAGDVTAWNNRAISLMGLDRHEEALASCMKAIALDQGSAEAWTLQGVVLNNLKRY 255 Query: 253 --------RVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTYNNIG 304 R + + P + AY L S + +RF +A+ KA+ ++ ++ Y N G Sbjct: 256 GEAIEAHERALRLKPGNAKAYNNL-SVALNGLNRFPEALSSCTKAIALNPDYSGAYINSG 314 Query: 305 AIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEGWECHESRLVTRERS 364 + G +AI + ALE P+ A NI + LL G+ +EGW+ R RE Sbjct: 315 NALNGLGRYNEAIACYSMALEKEPDSIDACWNIGFNQLLAGNFREGWKNFAWRWKKREMK 374 Query: 365 HVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVALHVK 424 R + P+W+GK SL G+ ILL EQG GD+IQF RY +V D+GA V L V+ Sbjct: 375 GYVREFSQ-----PEWNGKDSLDGRTILLYSEQGLGDTIQFCRYAGVVRDRGATVTLQVQ 429 Query: 425 NPLYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPSVPGGYLSADPI 484 + L L VT++ E +PPCD LMSLP T + I + GY+ AD Sbjct: 430 DALAPLLAGTLEGVTIISEETEVPPCDVHLSLMSLPGVFCT-VEETISADKNGYIRADAA 488 Query: 485 LKSSWGEKIRQLSQSPEKLRVGVVWGGNPEHGNDRHRSIAMDKFATLFQLP-NIEFYSLQ 543 W E++ P K RVG+VW G+ HGND +RSI + +F ++ LP ++ SLQ Sbjct: 489 KVRIWRERL----GVPSKPRVGLVWSGSTTHGNDHNRSIPLSEFVSV--LPEGFDYISLQ 542 Query: 544 KGKPLDAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHPTWV 603 K +AL I + G+ DFADTAA +DLVVSVDTSV HLAGA+G P W+ Sbjct: 543 KEVRESDMEALREHPGIVHFGEQLADFADTAALCELVDLVVSVDTSVAHLAGAMGRPVWI 602 Query: 604 LLPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQELV 649 LLP PDWRWL R+DSPWYP RLFRQ + +W V+ V + L+ Sbjct: 603 LLPFNPDWRWLLKRDDSPWYPTARLFRQESPGEWSRVMIAVREALL 648 >ref|ZP_08869415.1| TPR repeat-containing protein I [Azospirillum amazonense Y2] gb|EGY00992.1| TPR repeat-containing protein I [Azospirillum amazonense Y2] Length = 736 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 215/613 (35%), Positives = 309/613 (50%), Gaps = 26/613 (4%) Query: 39 KTDEAKALCMAVLSRNPTLVFANHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNL 98 K +EA A L P A++ RG+V + ++A+AEA R+A+ A P + NL Sbjct: 133 KLEEALAALDRALELRPAYAEAHNNRGVVHRLQSRWAEAEAGFRQALAAKPAYVNALYNL 192 Query: 99 AGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPN 158 + R+ EA+ E A+ DH + L AL + + + ++ + A P+ Sbjct: 193 GLVLRLTGRLAEALPWLEQAVDRAPDHAEACFNLGLALQDLDRHDDALPHLRRAAALRPD 252 Query: 159 APGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHK 218 P P S LG L EA+ ++L L FA +H +G + Y EA Sbjct: 253 DPVPHSSLGTTLQTLGHAPEALLCYQRALALNPDFADAHNNMGLILYIHGRYAEAESCFA 312 Query: 219 TAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDR 278 AI L P + HN + + L + A I+ P + LG + R Sbjct: 313 RAIALLPGNPKTHNNLGLALLAQGKGAAAARAFDLAIDAQPDYAEPHNNLGMA-LHAEGR 371 Query: 279 FDDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIA 338 D A AL ++ + NN+GA+ G+L+ A FR+A+ L+P+Y +N+ Sbjct: 372 MDLAQASIQAALALNPDYPEALNNLGAVFQAKGELDMAAACFRRAIALKPDYGACHNNLG 431 Query: 339 LSLLLQGHLKEGWECHESRLVTRERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQG 398 +SLL G +EGW +E R TR+ + R + P+W G+ + AGK IL+ EQG Sbjct: 432 MSLLAAGQYEEGWREYEWRWRTRQMTPYARQFPQ-----PQWRGEDA-AGKTILIHAEQG 485 Query: 399 FGDSIQFLRYVRMVLDQGARVALHVKNPLYRLFQSYSPEVTLVRESDPLPPCDCAYVLMS 458 GD++QF RY+ +V +G R+ L V+ + RL + ++ E +PLPP D +MS Sbjct: 486 LGDTLQFSRYLPLVAARGLRITLAVQPQVARLLRPLPGVTHILVEGEPLPPFDLQCPMMS 545 Query: 459 LPYAMGTDTVDDIPS-VPGGYLSADPILKSSWGEKIRQLSQSPEKLRVGVVWGGNPEHGN 517 LP A GT TV+ IP+ VP YL+ADP + W ++ L+ LR+G+ W GNP Sbjct: 546 LPLAFGT-TVETIPAEVP--YLAADPGDVAVWRDR---LAGDGAGLRIGLAWAGNPRRDR 599 Query: 518 ------DRHRSIAMDKFATLFQLPNIEFYSLQKGKPLDAFKALPPGLPIFNLGDDCQDFA 571 DR RS+A + L +P + YSLQK P P+ + + DFA Sbjct: 600 PELAAVDRRRSVAPELLMPLSTVPGMRLYSLQKDD------TPPAAFPMVDHMAEVADFA 653 Query: 572 DTAAAIANLDLVVSVDTSVVHLAGALGHPTWVLLPHVPDWRWLQDREDSPWYPGMRLFRQ 631 DTAA IANLDLV+SVDTSVVHLAGALG P WV+ H WRW + R DSPWYP +RLF Q Sbjct: 654 DTAALIANLDLVISVDTSVVHLAGALGKPVWVMNRHDSCWRWFRGRNDSPWYPTLRLFNQ 713 Query: 632 PALSDWESVLTKV 644 A DW+ V+T V Sbjct: 714 AAPGDWDGVVTDV 726 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 35/317 (11%) Query: 63 ARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIRID 122 A +V G+ A RKA+ P + E + L Q R+DEA+AL A+ + Sbjct: 21 AAAVVQHKAGRLEAAAVLYRKALSLMPRHPESLHLLGVVAFQQKRMDEAVALITQALALR 80 Query: 123 RDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAV 182 + L + D A+ F+ AV +P+ ++LG AL + EA+A Sbjct: 81 PAFPEALNNLGTVREAQGDINAAADCFQRAVALKPDFAEGYNNLGNALKAQGKLEEALAA 140 Query: 183 ILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYA----------HN 232 + ++LEL+ ++A +H G + EA + A+ P A Sbjct: 141 LDRALELRPAYAEAHNNRGVVHRLQSRWAEAEAGFRQALAAKPAYVNALYNLGLVLRLTG 200 Query: 233 KIADS--YLK----------------------LNRIDEAHEHLLRVIEIAPKDPNAYVKL 268 ++A++ +L+ L+R D+A HL R + P DP + L Sbjct: 201 RLAEALPWLEQAVDRAPDHAEACFNLGLALQDLDRHDDALPHLRRAAALRPDDPVPHSSL 260 Query: 269 GSSYFSTSDRFDDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRP 328 G++ T +A+ + +AL ++ A +NN+G I + HG +A F +A+ L P Sbjct: 261 GTT-LQTLGHAPEALLCYQRALALNPDFADAHNNMGLILYIHGRYAEAESCFARAIALLP 319 Query: 329 NYPTARHNIALSLLLQG 345 P +N+ L+LL QG Sbjct: 320 GNPKTHNNLGLALLAQG 336 >ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101] gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 3145 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 210/615 (34%), Positives = 318/615 (51%), Gaps = 28/615 (4%) Query: 39 KTDEAKALCMAVLSRNPTLVFANHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNL 98 + D A L V++ P A + EG+ +A A+ +KAI +P N+ SNL Sbjct: 1042 RNDIAIQLLNQVINLYPGFTEAYSNLAKLMKKEGRLEEAIAHYQKAISLEPNNSSNYSNL 1101 Query: 99 AGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPN 158 L + +I+ AI E +I I+ ++ L A EK D + Y++ A+ +P+ Sbjct: 1102 GFIFLEKGQIESAIINSEKSIEINPNNSQGNFNLGFAWAEKGDLSKASTYYQKAINLQPD 1161 Query: 159 APGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHK 218 ++LG E ++A ++LE+ ++A + LG + AIE + Sbjct: 1162 YAQAHNNLGLIFQEKGNLSKASNYYQQALEINPNYAEAWCNLGVILLKQGQIELAIEYFR 1221 Query: 219 TAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDR 278 ++ L+P A+N + + + + +A + + +EI P A+ LG + Sbjct: 1222 KSLELNPDYAQAYNNLGFVFQEKGNLSKASNYYQQALEINPNYAEAWCNLGV-VLRKQGQ 1280 Query: 279 FDDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIA 338 + A+ F K+LE++ +A+T+N++G + G+ +I +++KALEL PN+P N++ Sbjct: 1281 IELAIEYFRKSLELNPDYAMTHNSLGVTFEEEGNFTASIASYQKALELEPNFPEVHLNLS 1340 Query: 339 LSLLLQGHLKEGWECHESRLVTRERSHVYRLIHKLFDLIPK--WDGKSSLAGKYILLMHE 396 L LL G LK G++ + R ++ LF + P+ WDG S+L GK IL+ E Sbjct: 1341 LVWLLLGDLKLGFQEYNWR---------WQASKALFLIQPEKLWDG-SNLEGKKILIYAE 1390 Query: 397 QGFGDSIQFLRYVRMVLDQGARVALHVKNPLYRLFQSYSPEVTLVRESDPLPPCDCAYVL 456 QG+GD+IQF+RY+ +V QGAR+ L + PL RL + PE+ E D L Sbjct: 1391 QGYGDTIQFIRYIPLVKKQGARITLACQKPLVRLLEKI-PEIEQCLEEIVNLTFDVNAPL 1449 Query: 457 MSLPYAMGTDTVDDIPSVPGGYLSADPILKSSWGEKIRQLSQSPEK--LRVGVVWGGNPE 514 + LP GT T+D+IP PI + E +SPE+ L+VG+VW N + Sbjct: 1450 LELPRIFGT-TLDNIPP---------PIKNLNIPEIPSIKLESPERNYLKVGIVWMTNQD 1499 Query: 515 HGNDRHRSIAMDKFATLFQLPNIEFYSLQKGKPLDAFKALPPGLPIFNLGDDCQDFADTA 574 RS + F L + + FYSLQK +D L LPI +L DFADTA Sbjct: 1500 SPTAVKRSCKLMNFQYLLDVAGVSFYSLQKEPGVDL--KLLKTLPILDLSSQLNDFADTA 1557 Query: 575 AAIANLDLVVSVDTSVVHLAGALGHPTWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPAL 634 I LDLV++VDT+V HLAG LG P W+LLP VPDWRW+ DR DSPWYP RLFRQP Sbjct: 1558 GIITKLDLVITVDTAVAHLAGTLGKPVWILLPFVPDWRWMLDRNDSPWYPTARLFRQPKR 1617 Query: 635 SDWESVLTKVGQELV 649 DW SVL +V + L+ Sbjct: 1618 GDWNSVLIEVKEALM 1632 Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 156/445 (35%), Positives = 222/445 (49%), Gaps = 32/445 (7%) Query: 213 AIESHKTAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSY 272 AI ++ AI L+P + H +A K ++DEA H R IE+ P + + + LG Sbjct: 561 AIVYYQKAINLNPNNYKTHLGLAIVLKKQQKLDEAIVHNQRAIELKPNEASGWHNLGV-I 619 Query: 273 FSTSDRFDDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRPNYPT 332 F +A+ + K+LE+ + Y + I G+L +A + K +EL PN+ Sbjct: 620 FKIQGNIPEAICCYQKSLEIQPNNTYIYYSWANILKQQGNLTEAKVLYEKCIELNPNHIN 679 Query: 333 ARHNIALSLLLQGHLKEG-----WECHESRLVTRERSHVYRLIHKLFDLIPKWDGKSSLA 387 A +L QG L G W C +TR + WDG S+ A Sbjct: 680 AHFARGFIILKQGDLLVGFSEYEWRCQRQDYITRSFAK------------STWDG-SNFA 726 Query: 388 GKYILLMHEQGFGDSIQFLRYVRMVLDQGARVALHVKNPLYRLFQSYSPEV-TLVRESDP 446 K +L+ EQG GDSIQF+RY+ + G RV + P +L + E+ L E + Sbjct: 727 EKTLLIYTEQGLGDSIQFIRYIPLAKKLGGRVIVECNQPGLKLLFTTVLEIDELFVEGEK 786 Query: 447 LPPCDCAYVLMSLPYAMGTDTVDDIPS-VPGGYLSADPILKSSWGEKIRQLSQSPEK-LR 504 LP D LMSLP T T++ IP +P YLS + + SPE L+ Sbjct: 787 LPDFDFQISLMSLPRIFQT-TLETIPGEIP--YLSVPKSINFP-------IPLSPENNLK 836 Query: 505 VGVVWGGNPEHGNDRHRSIAMDKFATLFQLPNIEFYSLQKGKPLDAFKALPPGLPIFNLG 564 VG+ W + + + RS +++ + + + FY+LQK + + L I NLG Sbjct: 837 VGIFWQTSSTNETGQVRSCSVEYLEEIINIDTVNFYALQKEVSVADNEWLKCQTKIHNLG 896 Query: 565 DDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHPTWVLLPHVPDWRWLQDREDSPWYP 624 D DTAAAI LDLV+++DT + HLAGALG P WV+L DWRWL DR+DSPWYP Sbjct: 897 SSFNDLTDTAAAIEQLDLVITIDTVIAHLAGALGKPVWVMLNFDSDWRWLTDRKDSPWYP 956 Query: 625 GMRLFRQPALSDWESVLTKVGQELV 649 MRLFRQP + DW SVL +V + L+ Sbjct: 957 TMRLFRQPKIGDWNSVLIEVKEALM 981 Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 159/515 (30%), Positives = 240/515 (46%), Gaps = 65/515 (12%) Query: 137 HEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPS 196 ++ + E ++ +KR+PN L LG + + +A+A KSL++ ++A + Sbjct: 21 YQSGNWEETINICHKIIKRQPNNFLVLELLGLCAYKNNQIEQAIAYYQKSLKVNYNYAET 80 Query: 197 HTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIE 256 H L A QD +ID A H I+ Sbjct: 81 HNNLAVAL---------------------QDN-------------QQIDAALRHCKIAIK 106 Query: 257 IAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDA 316 + P A+ LG +F+ A+ + K+LE+ +A Y+++G I + G L ++ Sbjct: 107 LCPNYAEAWHNLGL-ILRDKGQFEAAIEHYQKSLEIKPNNAEVYHSLGTISLELGKLSES 165 Query: 317 IGNFRKALELRPNYPTARHNIALSLLLQGHLKEG-----WECHESRLVTRERSHVYRLIH 371 +++AL+L NY A +A LL QG L +G W C + S Sbjct: 166 QKYYQEALKLDKNYLNAHFGLAAVLLKQGSLMQGFSEYEWRCKRQDYINHSFSQ------ 219 Query: 372 KLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVALHV-KNPLYRL 430 P WDG S GK +L+ EQG GDSIQF+RY+ +V G RV + K+ L L Sbjct: 220 ------PVWDG-SKFPGKTLLVYTEQGLGDSIQFIRYIPLVKKLGGRVIVGCNKDGLKLL 272 Query: 431 FQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPS-VPGGYLSADPILKSSW 489 F + S L P D LMS+P GT+ +++IP+ +P ++ Sbjct: 273 FTTVSEIDELFVIGKKFPDFDLQIPLMSIPRIFGTN-LENIPTEIPYLFVPES------- 324 Query: 490 GEKIRQLSQSPEKLRVGVVWGGNPEHGNDRHRSIAMDKFATLFQLPNIEFYSLQKGKPLD 549 K Q ++ ++G+ W + + + RS ++ ++ + N +FY LQK + Sbjct: 325 --KKNQFLETVNSFKIGIAWKTDSQTKTSKKRSCSVKDLQSILNVDNAKFYILQKKVSPE 382 Query: 550 AFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHPTWVLLPHVP 609 + L I NL D ADTAA I LDLV+++DT + HLAGALG P WV+L Sbjct: 383 DLEWLNSQTKIHNLSSSFNDLADTAAVIKELDLVITIDTVIAHLAGALGKPVWVMLNFDS 442 Query: 610 DWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKV 644 DWRWL DREDSPWYP MRLFRQ + DW+ V +V Sbjct: 443 DWRWLIDREDSPWYPTMRLFRQKKMGDWQGVSQEV 477 Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 178/608 (29%), Positives = 287/608 (47%), Gaps = 64/608 (10%) Query: 60 ANHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAI 119 AN + +AE R +E P++ + ++ LA R D AI L I Sbjct: 1646 ANFENAYQYYQQNNLVEAERICRLILEEKPQDFQVLNLLAVLENLAGRNDIAIQLLNQVI 1705 Query: 120 RIDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEA 179 ++ P + AY S+L + + + R EA Sbjct: 1706 NLN-------------------PGFTKAY---------------SNLAKLMKKEGRLEEA 1731 Query: 180 VAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYL 239 +A K++EL+ + + ++++LG F AI ++K + ++P ++ + + + Sbjct: 1732 IAHYQKAIELEPNNSSNYSSLGWIFLQKGQIDLAIINYKKSRKINPNSSWININLGFVWE 1791 Query: 240 KLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALE-----VDS 294 K + +A+ + + IEI P A+ +LG+ +F+ A+ K+LE +++ Sbjct: 1792 KNGNLPKANTYYQKAIEIHPNHAEAWCRLGN-ILQKQGQFELAIEYCQKSLELNPDYIEA 1850 Query: 295 KHALTY--NNIGAIQHDHGDLEDAIGNF-RKALELRPNYPTARHNIALSLLLQGHLKEGW 351 H+L Y +G + E AI + +A+EL N+ A +A +LL QG+ G+ Sbjct: 1851 NHSLGYIFFQLGKLAESQKYYEQAIKKYYEQAIELNTNHVNAHFGLANALLKQGNFIPGF 1910 Query: 352 ECHESRLVTRERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRM 411 +E R T+ + R + + P WDG S+ G+ +L+ EQG GDSIQF+RY+ + Sbjct: 1911 SKYEWRWKTQ--GFIGRNLSQ-----PVWDG-SNFPGQTLLVYTEQGLGDSIQFIRYIPL 1962 Query: 412 VLDQGARVALHVKNP-LYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDD 470 V G RV + L LF + S L + + LP D LMSLP + T T + Sbjct: 1963 VKKLGGRVIVECNQAGLKLLFTTVSEIDELFIKGEKLPDFDLQIPLMSLPRILQT-TPET 2021 Query: 471 IPS-VPGGYLSADPILKSSWGEKIRQLSQSPEK-LRVGVVWGGNPEHGNDRHRSIAMDKF 528 IP+ +P YLS + + +PE L++G+ W + + RS ++ Sbjct: 2022 IPTEIP--YLSVPKSIDFP-------IPLAPENNLKLGICWQTSSTTETSQRRSCPVEYL 2072 Query: 529 ATLFQLPNIEFYSLQKGKPLDAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDT 588 + + + FY LQK + + L I NL D ADTAAAI LDLV+++DT Sbjct: 2073 EEIINIDTVNFYILQKEVSVADNEWLKSQTKIHNLSSSFNDLADTAAAIKQLDLVITIDT 2132 Query: 589 SVVHLAGALGHPTWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQEL 648 + HLAGALG WV+L +WRWL DREDSPWYP MRLFRQ + DW S++ ++ L Sbjct: 2133 VIAHLAGALGKSVWVMLNFDSNWRWLTDREDSPWYPTMRLFRQAKIGDWHSIIKQIKNSL 2192 Query: 649 VALQQKKA 656 + L + A Sbjct: 2193 IDLVENAA 2200 Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 141/417 (33%), Positives = 203/417 (48%), Gaps = 32/417 (7%) Query: 240 KLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALT 299 K ++ + + + I + P + Y+ L + +F+ A+ KAL +A Sbjct: 2283 KTDKTNLVITYCQKAISLNPNNEQTYLNLAIA-LKNQHKFNAAIIHNQKALSRKPNYAEA 2341 Query: 300 YNNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEG-----WECH 354 ++N+G I G++ ++I ++KAL +RPNY A +L L QG +G W C Sbjct: 2342 WHNLGQIFKGKGEITESIRCYQKALSIRPNYIDAHFGFSLIFLKQGDFIQGFSEYEWRCK 2401 Query: 355 ESRLVTRERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLD 414 TR P WDG S+ GK + + EQG GDSIQF+RY+ +V Sbjct: 2402 RQDYETRSFGQ------------PVWDG-SNFPGKTLFIYTEQGLGDSIQFIRYIPLVKK 2448 Query: 415 QGARVALHVKNP-LYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPS 473 G RV + L LF + S L + + LP D LMSLP T T++ IP+ Sbjct: 2449 LGGRVIVECNQAGLKLLFTTVSEIDELFVKGEKLPDFDLQIPLMSLPRIFQT-TLETIPT 2507 Query: 474 -VPGGYLSADPILKSSWGEKIRQLSQSPEK-LRVGVVWGGNPEHGNDRHRSIAMDKFATL 531 +P YLS + + +PE L+VG+ W + + RS ++ + Sbjct: 2508 EIP--YLSVPKSIDFP-------IPLAPENNLKVGICWQTSSTIKTSQRRSCPVEYLEEI 2558 Query: 532 FQLPNIEFYSLQKGKPLDAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVV 591 + + FY LQK + + L I NL D DTAA I LDLV+++DT + Sbjct: 2559 INIDTVNFYILQKEVSVADNEWLKSQTQIHNLSSSFNDLTDTAAVIKQLDLVITIDTVIA 2618 Query: 592 HLAGALGHPTWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQEL 648 HLAGALG P WV+L DWRWL DR+DSPWYP MRLFRQ + W SVL +V + L Sbjct: 2619 HLAGALGKPVWVMLNFDSDWRWLTDRKDSPWYPTMRLFRQAKIGYWNSVLKQVKESL 2675 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 9/224 (4%) Query: 25 LLDVRKALDLLDSRKTDEAKALCMAVLSRNPTLVFANHARGLVAMHEGKFADAEAYLRKA 84 +L++ L+ L R D A L V++ NP A + EG+ +A A+ +KA Sbjct: 1680 VLNLLAVLENLAGR-NDIAIQLLNQVINLNPGFTKAYSNLAKLMKKEGRLEEAIAHYQKA 1738 Query: 85 IEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEA 144 IE +P N+ S+L L + +ID AI Y+ + +I+ + I L + + Sbjct: 1739 IELEPNNSSNYSSLGWIFLQKGQIDLAIINYKKSRKINPNSSWININLGFVWEKNGNLPK 1798 Query: 145 SVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAF 204 + Y++ A++ PN LG L + ++ A+ KSLEL + ++ +LG F Sbjct: 1799 ANTYYQKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANHSLGYIF 1858 Query: 205 HAM-------EMYKEAIES-HKTAILLDPQDTYAHNKIADSYLK 240 + + Y++AI+ ++ AI L+ AH +A++ LK Sbjct: 1859 FQLGKLAESQKYYEQAIKKYYEQAIELNTNHVNAHFGLANALLK 1902 >ref|ZP_03127398.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gb|EDY22437.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 630 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 210/617 (34%), Positives = 314/617 (50%), Gaps = 22/617 (3%) Query: 42 EAKALCMAVLSRNPTLVFANHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGT 101 EA+ L +L P A H G++A G+ A ++KAI P A++ SNL Sbjct: 24 EAEGLYRQILGAQPNHAGALHLLGVIADQVGRHEVAVELIQKAIALAPNVADFHSNLGAA 83 Query: 102 VLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPG 161 + R DEA+A + AI++ DH + L +AL + +V ++ P Sbjct: 84 QRNLGRFDEAMAEFRRAIQLQPDHADAHNNLGSALIAQGVLGEAVTVLRRTIELRPTLAE 143 Query: 162 PLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAI 221 ++LG AL R EAVA +++ELQ +A + +LG A EAI + + AI Sbjct: 144 AHNNLGIALGGEGRGEEAVAACRRAVELQPGYANGYNSLGVALVNQRELAEAIAAFRRAI 203 Query: 222 LLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDD 281 + P A+ + ++ + +DEA R IEI P A+ LG + + + Sbjct: 204 AVYPDYVEAYCNLGNALVDEGSLDEAVATCRRAIEIRPNHAEAHNNLGVALIAQGA-LQE 262 Query: 282 AMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSL 341 A F +ALE+ A +++N+ G L++A +A+EL+P A+ N +L L Sbjct: 263 AGDAFRRALELQPNQAESHSNLSVTLMAEGRLDEAGAELCRAIELQPQAAQAKFNYSLQL 322 Query: 342 LLQGHLKEGWECHESRLVTRERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGD 401 LLQG ++GW +ESR + R + P W G+ L G+ +L+ EQG GD Sbjct: 323 LLQGDFEQGWPLYESRWGVGDLRFAKRDFPQ-----PMWRGEP-LHGQRVLIYAEQGLGD 376 Query: 402 SIQFLRYVRMVLDQGARVALHVKNPLYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPY 461 ++QF+RY ++ ++G V L + L LF S ++ DPLP + +MSLP Sbjct: 377 TLQFVRYAPLIAERGGHVILECQPELKSLFTSLEGVAEIIVIGDPLPDFELHCRMMSLPL 436 Query: 462 AMGTDTVDDIP-SVPGGYLSADPILKSSWGEKIRQLSQSPEKLRVGVVWGGN--PEHGN- 517 A GT V+ IP ++P YL ADP W E++ L+VG+VW G P N Sbjct: 437 AFGT-RVETIPATIP--YLRADPAGVRRWKERL-----EGNALKVGLVWAGGMRPRQLNA 488 Query: 518 ---DRHRSIAMDKFATLFQLPNIEFYSLQKGKPLDAFKALPPGLPIFNLGDDCQDFADTA 574 DR RS+ + + A ++P + F SLQKG P + K P G+ + + ++ +DFA+TA Sbjct: 489 DRIDRRRSVLLGQLAPFAEVPGVVFVSLQKGPPAEQAKTPPVGMTLLDWSEELRDFAETA 548 Query: 575 AAIANLDLVVSVDTSVVHLAGALGHPTWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPAL 634 A + LDLV++VDT+V HLAGALG P W+L WRWL REDSPWYP MR+FRQP Sbjct: 549 ALVECLDLVITVDTAVAHLAGALGKPVWLLNRFDTCWRWLLGREDSPWYPTMRIFRQPKF 608 Query: 635 SDWESVLTKVGQELVAL 651 DW S + + L L Sbjct: 609 GDWSSAIDQASAALAKL 625 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 35/252 (13%) Query: 132 LANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVILKSLELQI 191 LA A H+ + + + +PN G L LG + R+ AV +I K++ L Sbjct: 12 LAVAHHQAGRLAEAEGLYRQILGAQPNHAGALHLLGVIADQVGRHEVAVELIQKAIALAP 71 Query: 192 SFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLKLNRIDEAHEHL 251 + A H+ LG A + + EA+ + AI L P AHN + + + + EA L Sbjct: 72 NVADFHSNLGAAQRNLGRFDEAMAEFRRAIQLQPDHADAHNNLGSALIAQGVLGEAVTVL 131 Query: 252 LRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTYN---------- 301 R IE+ P A+ LG + R ++A+ +A+E+ +A YN Sbjct: 132 RRTIELRPTLAEAHNNLGIA-LGGEGRGEEAVAACRRAVELQPGYANGYNSLGVALVNQR 190 Query: 302 ------------------------NIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNI 337 N+G D G L++A+ R+A+E+RPN+ A +N+ Sbjct: 191 ELAEAIAAFRRAIAVYPDYVEAYCNLGNALVDEGSLDEAVATCRRAIEIRPNHAEAHNNL 250 Query: 338 ALSLLLQGHLKE 349 ++L+ QG L+E Sbjct: 251 GVALIAQGALQE 262 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 108/226 (47%) Query: 39 KTDEAKALCMAVLSRNPTLVFANHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNL 98 + DEA A + P A++ G + +G +A LR+ IE P AE +NL Sbjct: 89 RFDEAMAEFRRAIQLQPDHADAHNNLGSALIAQGVLGEAVTVLRRTIELRPTLAEAHNNL 148 Query: 99 AGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPN 158 + + R +EA+A A+ + + L AL + + ++A F A+ P+ Sbjct: 149 GIALGGEGRGEEAVAACRRAVELQPGYANGYNSLGVALVNQRELAEAIAAFRRAIAVYPD 208 Query: 159 APGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHK 218 +LG AL++ +EAVA +++E++ + A +H LG A A +EA ++ + Sbjct: 209 YVEAYCNLGNALVDEGSLDEAVATCRRAIEIRPNHAEAHNNLGVALIAQGALQEAGDAFR 268 Query: 219 TAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNA 264 A+ L P +H+ ++ + + R+DEA L R IE+ P+ A Sbjct: 269 RALELQPNQAESHSNLSVTLMAEGRLDEAGAELCRAIELQPQAAQA 314 >ref|YP_001859985.1| TPR repeat-containing protein [Burkholderia phymatum STM815] gb|ACC72939.1| TPR repeat-containing protein [Burkholderia phymatum STM815] Length = 578 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 210/586 (35%), Positives = 291/586 (49%), Gaps = 53/586 (9%) Query: 64 RGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDR 123 + + H G ++AE R+ + P++ + + L L R+DE I L + AI I+ Sbjct: 17 QAIAMQHNGAHSEAEDLYREILSLRPKHFDAIQLLGALSLQAGRVDEGIELLKKAIAIN- 75 Query: 124 DHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVI 183 G+ ALH S+L A +R+NE +A Sbjct: 76 -------GMQAALH--------------------------SNLAYAYNAQRRFNEGLASA 102 Query: 184 LKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLKLNR 243 ++L LQ +FA + G A ++ EA+ S + AI L P A N A L+R Sbjct: 103 NRALALQANFADALNNRGNALAGLDRPAEALASFEKAIALQPALAQAWNNCACVLRDLDR 162 Query: 244 IDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTYNNI 303 D+A I + A+ ++ S +R DA + +ALE+ +N+ Sbjct: 163 PDDALACCDEAIALQAGYAEAWSNRANA-LSDLNRPLDAEASYRRALELAPSFVDARSNL 221 Query: 304 GAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEGWECHESRLVTRER 363 G Q D E+A+ ++ +AL L P + A N AL LL G L EGW+ +E R Sbjct: 222 GLTQIDLKQHEEALQSYERALALNPEHAEAHWNRALCLLQMGRLDEGWQEYEWRWQRHRM 281 Query: 364 SHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVALHV 423 R + + P W G+ L GK ILL EQG GD++QF RYV +V GA+V L V Sbjct: 282 QGAQRHVGQ-----PLWLGQFPLEGKTILLHAEQGLGDTLQFCRYVPLVAAMGAKVILEV 336 Query: 424 KNPLYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPS-VPGGYLSAD 482 L RL ++ + LV + PLPP DC L+SLP A GT+ VD+IPS P YL D Sbjct: 337 PQELVRLLRTLNGVAELVEQEQPLPPFDCHAPLLSLPLAFGTN-VDNIPSRTP--YLHPD 393 Query: 483 PILKSSWGEKIRQLSQSPEKLRVGVVW-GGNPEH-----GNDRHRSIAMDKFATLFQLPN 536 W E++ S + L+VG+VW GGN H D RSIA+D + P+ Sbjct: 394 ESDTERWSERL--ASDASRALKVGLVWAGGNRPHVAELRKTDARRSIALDMLVPILDTPH 451 Query: 537 IEFYSLQKGKPLDAFKALPP-GLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAG 595 ++FYSLQKG + P I + D+ DFADTAA ++NLDLV+SVDT+V HLAG Sbjct: 452 VQFYSLQKGPASGQLRGNPQLAGRIVDYTDEFADFADTAAFVSNLDLVISVDTAVAHLAG 511 Query: 596 ALGHPTWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVL 641 A G P W++ WRWL DR DSPWYP RLFRQP L DW+SV+ Sbjct: 512 ATGTPVWIMNRFDTCWRWLLDRTDSPWYPHARLFRQPTLGDWDSVI 557 >ref|YP_001991518.1| TPR repeat-containing protein [Rhodopseudomonas palustris TIE-1] gb|ACF01043.1| TPR repeat-containing protein [Rhodopseudomonas palustris TIE-1] Length = 608 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 210/581 (36%), Positives = 302/581 (51%), Gaps = 19/581 (3%) Query: 70 HEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDRDHRASR 129 +G+ A+AEA R+ + D +A+ L L R D A+ + AI ++R A Sbjct: 41 QQGRLAEAEALYRQVLNVDARHADAWHLLGVLALQVGRNDIALEMIGKAISLNRMVAAYH 100 Query: 130 IGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVILKSLEL 189 AL P ++A ++ A+ EP + ALI R +A+ +L L Sbjct: 101 GNRGLALDGLGRPAEALASYDAALAIEPRVAEAHCNRAAALITLGRPEDALRAAEAALRL 160 Query: 190 QISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLKLNRIDEAHE 249 Q + G A + EA+ +++T + P + A L R+DEA Sbjct: 161 QPDDVNAKINRGNALRDLGRLDEALSAYETVLRTAPGNALAQTNRGIVLKTLGRLDEALA 220 Query: 250 HLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTYNNIGAIQHD 309 ++ P A+ G + R D+A+ KA+++ + A + N+ + HD Sbjct: 221 CYDAALQADPNLAEAHTNRGVT-LKNLLRLDEALTACQKAIQLQPRSADAHYNLATVLHD 279 Query: 310 HGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEGWECHESRLVTRERSHVYRL 369 L+DA+ ++ +AL LRP++ AR N A LL G +EGW HE R R R Sbjct: 280 QCRLDDALASYDQALALRPDFAMARWNRACILLSTGRFQEGWREHEWR---SHRESAPRQ 336 Query: 370 IHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVALHVKNPLYR 429 + P+W G++ LAG+ +LL EQG GD++QFLRYV V GAR+ L V PL+R Sbjct: 337 FPQ-----PQWSGEA-LAGRTLLLHAEQGLGDTLQFLRYVPKVAATGARIILAVPGPLHR 390 Query: 430 LFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPS-VPGGYLSADPILKSS 488 L P+V +V ++ LP D L+SLP GT T++ IP+ VP YLSADP + Sbjct: 391 LVAQSFPDVVVVDDAGALPAFDLHCPLLSLPLCFGT-TLETIPADVP--YLSADPAAVAR 447 Query: 489 WGEKIRQLSQSPEKLRVGVVWGGNPEHGNDRHRSIAMDKFATLFQLPNIEFYSLQKGKPL 548 W E++ S+ +VG+VW GNP H NDR+RS+ + A LF L IE+ SLQ G Sbjct: 448 WRERLSAGSRP----KVGLVWAGNPRHANDRNRSLPFAQLAPLFNLAGIEWISLQVGDRR 503 Query: 549 DAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHPTWVLLPHV 608 P GL + ++ DD DFA+TAAA++ LDL+VSVDT+V HLA AL P + +P V Sbjct: 504 TDLAQAPAGL-LRDVADDLTDFAETAAAVSALDLIVSVDTAVAHLAAALARPVIMAIPFV 562 Query: 609 PDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQELV 649 PDWRWL REDSPWYP +RL RQ DW+ V+TK+ L Sbjct: 563 PDWRWLLAREDSPWYPTVRLVRQTRPQDWDGVVTKLAATLT 603 >ref|YP_003908546.1| tetratricopeptide repeat-containing protein [Burkholderia sp. CCGE1003] gb|ADN59255.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp. CCGE1003] Length = 602 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 207/649 (31%), Positives = 313/649 (48%), Gaps = 50/649 (7%) Query: 5 KNSNKHGKPATPPPKHPLQDLLDVRKALDLLDSRKTDEAKALCMAVLSRNPTLVFANHAR 64 + S + G PPP + L V AL ++ + D A ++ +L+ +P A H Sbjct: 3 RQSQRPGGRTAPPPSPNVASL--VEAALHAHEAGRFDTADSIYREILALDPANTRALHYF 60 Query: 65 GLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDRD 124 G++ G+ A + +A++ D ++A SN + R+DEA Y+ A+++ + Sbjct: 61 GVLHYQRGQHEAAAILMSQALKHDRQDAACWSNRGLAAAALGRLDEATICYDQALQLQPN 120 Query: 125 HRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVIL 184 +R AL + +V + A+ P +LG AL + R+ EA+A Sbjct: 121 FADARNNFGVALQAQGALNEAVEQYRLAIASNPALVDAHLNLGTALGKLGRFAEALACYR 180 Query: 185 KSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYAHNKIADSYLKLNRI 244 +L+L + A +H G A +A ++ A+ S + A+ L P AH + + K Sbjct: 181 NALQLDPASAEAHFNAGNAHNARGEHEAAVASFERALALRPDYAEAHVNLGSAIGKRGDY 240 Query: 245 DEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKALEVDSKHALTYNNIG 304 A H R +E+ P +P V +G + +G Sbjct: 241 AGAEAHYRRAVELKP-NPTNLVCMGGA-------------------------------LG 268 Query: 305 AIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEGWECHESRLVTRERS 364 A G L + +R+AL PNY A N+A LL QG ++GW + R R Sbjct: 269 A----QGRLAEEEKFYREALAQDPNYADAHQNLAWLLLKQGDYRQGW----AEFARRWRK 320 Query: 365 HVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVRMVLDQGARVALHVK 424 Y + + +W G+ L G+ +L++ EQGFGD QFLRY R++ ++GA V + V+ Sbjct: 321 SDYEAL--AVPGVAEWHGEP-LEGRRLLIVGEQGFGDHFQFLRYARVLHERGATVDVCVR 377 Query: 425 NPLYRLFQSYSPEVTLVRESDPLPPCDCAYVLMSLPYAMGTDTVDDIPSVPGGYLSADPI 484 PL RL Q P V P D +MS+P +GT+ +P YL AD Sbjct: 378 EPLLRLAQRV-PGVRRAFAGKPAAQYDFWVPMMSVPSCVGTELATIPAELP--YLFADAA 434 Query: 485 LKSSWGEKIRQLSQSPEKLRVGVVWGGNPEHGNDRHRSIAMDKFATLFQLPNIEFYSLQK 544 +W +K+ + K R+G+VW G+P GNDR+RS+A+ L N+ +Y+LQK Sbjct: 435 KVEAWRKKLHTGGNA--KRRIGLVWAGSPTFGNDRYRSMALADLHPLAGAANVSWYALQK 492 Query: 545 GKPLDAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTSVVHLAGALGHPTWVL 604 G P L + + DF DTAA + NLDLV++VDT+V HLAGALG P W+L Sbjct: 493 GPAHAQLADAPQALREHDFSGELHDFDDTAALVMNLDLVIAVDTAVAHLAGALGKPVWLL 552 Query: 605 LPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQELVALQQ 653 LP DWRWLQ R DSPWYPGMRLFRQ L +W ++++V Q L L+Q Sbjct: 553 LPANSDWRWLQARSDSPWYPGMRLFRQQVLGEWSGLVSEVVQALGGLEQ 601 >ref|YP_004210192.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9] gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] Length = 663 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 199/599 (33%), Positives = 297/599 (49%), Gaps = 19/599 (3%) Query: 51 LSRNPTLVFANHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDE 110 + ++P++ +H H+G +A +AI +P +A+ + LA +L+ DE Sbjct: 61 IHQSPSVATYHHHLAKTHTHQGNTLEAIKGYERAISLNPADADSIELLAKLLLASGTKDE 120 Query: 111 AIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRAL 170 A+ LY + + D L + L +D +AS+ + +A +R P+ P +L R L Sbjct: 121 ALKLYRQLLSLCPDRPDVYFNLGHLLEFDDDKDASLNIYREAARRFPDNPDAHFNLARKL 180 Query: 171 IECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTYA 230 + +A+ L L+ A + LG FH + +A ES+ AI P A Sbjct: 181 KAEGQTQQAINSFENVLLLKPDDAETFNYLGTLFHLLGETDKAKESYLLAIKHKPDYPLA 240 Query: 231 HNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRFDDAMRMFNKAL 290 + + + A L + IE+ P AY LGS + A+ + L Sbjct: 241 LCNLGALLMDFGQWQVAEMMLRKAIELDPDLLAAYCNLGSVLAQQGNTVA-AIEALRQVL 299 Query: 291 EVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIALSLLLQGHLKEG 350 + D HA +G ++ GD A+ F AL+ P + R N++ L G+ EG Sbjct: 300 QRDPAHAEALCTLGNTMNNLGDEAGAMKCFHLALKANPGHALTRFNMSTLTLAAGNFAEG 359 Query: 351 WECHESRLVTRERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQGFGDSIQFLRYVR 410 W +E R RE S R + + P+W G+ L G I + EQGFGD+IQF RYV Sbjct: 360 WPDYELRWQVRESSRNERHLTQ-----PRWTGED-LRGSSIFVYAEQGFGDTIQFSRYVL 413 Query: 411 MVLDQGARVALHVKNPLYRLFQSYSPEVTLVRESDPLPPCDCAYV-LMSLPYAMGTDTVD 469 ++++ GA+V L V+ L++L ++ P V ++ + P + L+SLP TD Sbjct: 414 LLVELGAQVILEVQPQLFQLLENIHPSVLVITKDSPAASETNFHCPLLSLPSIFETD--- 470 Query: 470 DIPSVPGGYLSADPILKSSWGEKIRQLSQSPEKLRVGVVWGGNPEHGNDRHRSIAMDKFA 529 I S+P + P L + G + ++LRVGVVW GNP+H DR RSI ++F+ Sbjct: 471 -IESIP----ACIPNLHTEVGHMAWPEHLASKRLRVGVVWAGNPDHMRDRMRSIPFNQFS 525 Query: 530 TLFQLPNIEFYSLQKGKPLDAFKALPPGLPIFNLGDDCQDFADTAAAIANLDLVVSVDTS 589 + I FYSLQKG F + +L DF DTA AI N+DLV++VDTS Sbjct: 526 HILSASEIAFYSLQKGPAATQFAT---AQHVIDLDAILLDFTDTATAILNMDLVITVDTS 582 Query: 590 VVHLAGALGHPTWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPALSDWESVLTKVGQEL 648 V HLAGALG P W+LL H PDWRWL+ R D+PWYP RLFRQ W+ VL++V +EL Sbjct: 583 VAHLAGALGKPVWILLHHTPDWRWLRGRVDTPWYPSARLFRQTEPGKWDDVLSEVEREL 641