BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0076.p (114 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775471.1| flagellar biosynthetic protein [Herbaspirill... 230 5e-59 ref|ZP_08276222.1| Flagellar biosynthesis protein FlhB [Oxalobac... 134 4e-30 ref|YP_003166187.1| putative flagellar biosynthetic protein [Can... 130 7e-29 ref|NP_842088.1| flagellar biosynthetic protein [Nitrosomonas eu... 122 2e-26 ref|YP_001353134.1| hypothetical protein mma_1444 [Janthinobacte... 122 2e-26 ref|YP_004694179.1| type III secretion exporter [Nitrosomonas sp... 122 2e-26 ref|ZP_08503338.1| Putative flagellar protein FhlB [Methyloversa... 120 5e-26 ref|YP_284004.1| flagellar biosynthetic protein [Dechloromonas a... 120 6e-26 ref|ZP_01916412.1| putative flagellar biosynthetic protein [Limn... 120 6e-26 ref|YP_001100147.1| putative part of export apparatus for flagel... 119 1e-25 >ref|YP_003775471.1| flagellar biosynthetic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63563.1| flagellar biosynthetic protein [Herbaspirillum seropedicae SmR1] Length = 114 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 114/114 (100%), Positives = 114/114 (100%) Query: 1 MEKPNIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQ 60 MEKPNIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQ Sbjct: 1 MEKPNIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQ 60 Query: 61 VELDQQIPPALYRTVAELLAWLYRIENMQLNSSVMYDTGLNYSNNSPGESDPTR 114 VELDQQIPPALYRTVAELLAWLYRIENMQLNSSVMYDTGLNYSNNSPGESDPTR Sbjct: 61 VELDQQIPPALYRTVAELLAWLYRIENMQLNSSVMYDTGLNYSNNSPGESDPTR 114 >ref|ZP_08276222.1| Flagellar biosynthesis protein FlhB [Oxalobacteraceae bacterium IMCC9480] gb|EGF30311.1| Flagellar biosynthesis protein FlhB [Oxalobacteraceae bacterium IMCC9480] Length = 97 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 63/86 (73%), Positives = 74/86 (86%) Query: 1 MEKPNIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQ 60 M+KP PL+NAVALAY + AAP++VAKGRGL+A II RA+E GV+VHESKELV+LLMQ Sbjct: 1 MDKPASPLKNAVALAYQSGDAAPKIVAKGRGLIATQIIERAKEHGVFVHESKELVALLMQ 60 Query: 61 VELDQQIPPALYRTVAELLAWLYRIE 86 V+LD QIPPALYR +AELLAWLY IE Sbjct: 61 VDLDGQIPPALYRAIAELLAWLYHIE 86 >ref|YP_003166187.1| putative flagellar biosynthetic protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV34258.1| putative flagellar biosynthetic protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 108 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 66/89 (74%), Positives = 74/89 (83%) Query: 4 PNIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQVEL 63 P PL+NAVALAY+ + AAP+VVAKGRGLVAE IIARA E GVYVHES ELVSLL+QV+L Sbjct: 5 PTNPLKNAVALAYSQTDAAPRVVAKGRGLVAEQIIARAHEHGVYVHESAELVSLLLQVDL 64 Query: 64 DQQIPPALYRTVAELLAWLYRIENMQLNS 92 DQ IPP LY VAELLAWLYR+E+ Q S Sbjct: 65 DQHIPPQLYLAVAELLAWLYRLESGQSES 93 >ref|NP_842088.1| flagellar biosynthetic protein [Nitrosomonas europaea ATCC 19718] emb|CAD85989.1| possible similar to flagellar biosynthetic protein [Nitrosomonas europaea ATCC 19718] Length = 119 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/83 (71%), Positives = 69/83 (83%) Query: 5 NIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQVELD 64 + P+ AVALAY++ APQVVAKGRGL+AE II RA+E+GVYVHES ELV+LLMQV+LD Sbjct: 24 HTPIPGAVALAYHSGMTAPQVVAKGRGLIAEEIIRRAQEAGVYVHESAELVALLMQVDLD 83 Query: 65 QQIPPALYRTVAELLAWLYRIEN 87 IPP LY VAELLAWLYR+EN Sbjct: 84 DHIPPELYIAVAELLAWLYRLEN 106 >ref|YP_001353134.1| hypothetical protein mma_1444 [Janthinobacterium sp. Marseille] gb|ABR91727.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 95 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/89 (68%), Positives = 73/89 (82%), Gaps = 1/89 (1%) Query: 1 MEKPNIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQ 60 M+K P Q AVALAY ++ +AP+VVAKGRG +AE II RA+E GV +HESKELV+LL+Q Sbjct: 1 MDK-TTPPQQAVALAYQSNDSAPRVVAKGRGAIAEQIIERAKEHGVAIHESKELVALLLQ 59 Query: 61 VELDQQIPPALYRTVAELLAWLYRIENMQ 89 VELD+ IPPALYR VAELLAWLYR+E Q Sbjct: 60 VELDEHIPPALYRAVAELLAWLYRVEAAQ 88 >ref|YP_004694179.1| type III secretion exporter [Nitrosomonas sp. Is79A3] gb|AEJ00780.1| type III secretion exporter [Nitrosomonas sp. Is79A3] Length = 107 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/103 (59%), Positives = 73/103 (70%) Query: 5 NIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQVELD 64 N P AVALAY Q AP+VVAKGRGL+A+ II RA+E+GVYVHES ELV+LLMQV LD Sbjct: 4 NEPYLTAVALAYREGQIAPKVVAKGRGLIAQEIIKRAKEAGVYVHESSELVALLMQVNLD 63 Query: 65 QQIPPALYRTVAELLAWLYRIENMQLNSSVMYDTGLNYSNNSP 107 +IPP LY VAELLAWLYR+E + N + + G + P Sbjct: 64 DRIPPQLYVAVAELLAWLYRLEQGKTNPLITKNLGTKTTQKIP 106 >ref|ZP_08503338.1| Putative flagellar protein FhlB [Methyloversatilis universalis FAM5] gb|EGK73161.1| Putative flagellar protein FhlB [Methyloversatilis universalis FAM5] Length = 102 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/81 (71%), Positives = 69/81 (85%) Query: 7 PLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQVELDQQ 66 P AVALAY A AAP+VVAKGRG+VA+ II RARE+GV+VHES+E+VSLLM ++LDQ+ Sbjct: 5 PRAQAVALAYGAGDAAPRVVAKGRGMVADEIIRRAREAGVFVHESREMVSLLMGLDLDQR 64 Query: 67 IPPALYRTVAELLAWLYRIEN 87 IPP LY VAELLAW+YRIEN Sbjct: 65 IPPELYVAVAELLAWIYRIEN 85 >ref|YP_284004.1| flagellar biosynthetic protein [Dechloromonas aromatica RCB] gb|AAZ45534.1| possible flagellar biosynthetic protein [Dechloromonas aromatica RCB] Length = 93 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 57/84 (67%), Positives = 71/84 (84%) Query: 4 PNIPLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQVEL 63 P+ P + A+ALAY+ + AAP+VVAKG+GL+AE IIARA+E GVYVHES ELV+LL QV+L Sbjct: 5 PSDPTREAIALAYSQTDAAPRVVAKGKGLIAEQIIARAKEHGVYVHESPELVALLTQVDL 64 Query: 64 DQQIPPALYRTVAELLAWLYRIEN 87 D+ IPP LY +AELLAWLYRIE+ Sbjct: 65 DEHIPPQLYIAIAELLAWLYRIEH 88 >ref|ZP_01916412.1| putative flagellar biosynthetic protein [Limnobacter sp. MED105] gb|EDM82389.1| putative flagellar biosynthetic protein [Limnobacter sp. MED105] Length = 95 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 56/84 (66%), Positives = 71/84 (84%) Query: 9 QNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQVELDQQIP 68 Q AVALAY AP+VVAKG+GL+AE II +A+ESGV+VHES+ELVSLLM V+LDQQIP Sbjct: 8 QQAVALAYLEHSGAPKVVAKGQGLIAEQIIQKAKESGVFVHESRELVSLLMNVDLDQQIP 67 Query: 69 PALYRTVAELLAWLYRIENMQLNS 92 P LY+ +AELLAW+Y+IEN + ++ Sbjct: 68 PGLYQAIAELLAWVYQIENKEFST 91 >ref|YP_001100147.1| putative part of export apparatus for flagellar proteins (partial) [Herminiimonas arsenicoxydans] Length = 97 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/83 (69%), Positives = 69/83 (83%) Query: 7 PLQNAVALAYNASQAAPQVVAKGRGLVAEAIIARARESGVYVHESKELVSLLMQVELDQQ 66 P +AVALAY + +AP++VAKGRGL+AE II RA+E GV +HESKELV+LL+QVELD Sbjct: 9 PPPSAVALAYQSGDSAPRIVAKGRGLIAEQIIERAKEHGVAIHESKELVALLLQVELDDN 68 Query: 67 IPPALYRTVAELLAWLYRIENMQ 89 IPPALYR VAELLAWLYR+E Q Sbjct: 69 IPPALYRAVAELLAWLYRVEAAQ 91