BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0074.p (118 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775469.1| flagellar hook-basal body protein [Herbaspir... 232 2e-59 ref|YP_001100149.1| flagellar hook-basal body protein FliE [Herm... 129 2e-28 ref|YP_001353132.1| flagellar hook-basal body protein FliE [Jant... 127 7e-28 ref|YP_546087.1| flagellar hook-basal body protein FliE [Methylo... 125 2e-27 ref|YP_003050530.1| flagellar hook-basal body protein FliE [Meth... 122 2e-26 ref|YP_003048362.1| flagellar hook-basal body protein FliE [Meth... 120 8e-26 ref|ZP_08272777.1| Flagellar hook-basal body complex protein Fli... 120 1e-25 ref|YP_003673962.1| flagellar hook-basal body complex subunit Fl... 117 4e-25 ref|YP_004039200.1| flagellar hook-basal body complex subunit fl... 110 5e-23 ref|NP_902807.1| flagellar hook-basal body protein FliE [Chromob... 103 7e-21 >ref|YP_003775469.1| flagellar hook-basal body protein [Herbaspirillum seropedicae SmR1] gb|ADJ63561.1| flagellar hook-basal body protein [Herbaspirillum seropedicae SmR1] Length = 118 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 118/118 (100%), Positives = 118/118 (100%) Query: 1 MAIESVIDTSKIEAMVAQLKAAAARAQGVSEPAQIGLKVEKAAPRVDFSEVLKGAIDQVN 60 MAIESVIDTSKIEAMVAQLKAAAARAQGVSEPAQIGLKVEKAAPRVDFSEVLKGAIDQVN Sbjct: 1 MAIESVIDTSKIEAMVAQLKAAAARAQGVSEPAQIGLKVEKAAPRVDFSEVLKGAIDQVN 60 Query: 61 DSQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 DSQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV Sbjct: 61 DSQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 >ref|YP_001100149.1| flagellar hook-basal body protein FliE [Herminiimonas arsenicoxydans] emb|CAL62025.1| Flagellar hook-basal body complex protein FliE [Herminiimonas arsenicoxydans] Length = 119 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/113 (59%), Positives = 87/113 (76%), Gaps = 1/113 (0%) Query: 7 IDTSKIEAMVAQLKAAAARAQGVSEPAQIGL-KVEKAAPRVDFSEVLKGAIDQVNDSQQK 65 ID++ I+AMVAQLKAAAAR+Q P G VEK+A +VDFS+ LK ++D V +Q Sbjct: 7 IDSTAIDAMVAQLKAAAARSQPAINPLAGGASPVEKSATKVDFSQALKASLDNVASAQNH 66 Query: 66 ASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 A K+ Q F +GDD+VNLSDVMI+ QKASISFQ ++Q+RNK+VSAY++IM MQV Sbjct: 67 ADKLGQKFTLGDDSVNLSDVMISMQKASISFQATVQMRNKVVSAYQEIMNMQV 119 >ref|YP_001353132.1| flagellar hook-basal body protein FliE [Janthinobacterium sp. Marseille] gb|ABR88839.1| FliE flagellar hook-basal body protein [Janthinobacterium sp. Marseille] Length = 122 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 66/113 (58%), Positives = 88/113 (77%), Gaps = 1/113 (0%) Query: 7 IDTSKIEAMVAQLKAAAARAQGVSEPAQIGL-KVEKAAPRVDFSEVLKGAIDQVNDSQQK 65 ID+S I+AMVAQL+AAAAR+Q S G+ + EK A R DFS+ LK ++D V +Q Sbjct: 10 IDSSAIDAMVAQLRAAAARSQAPSVNPLGGMAQPEKTATRADFSQALKASLDNVASAQNS 69 Query: 66 ASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 A++M + F+MGDD+VNLSDVM++ QKASISFQ ++QVRNKLVSAY+++M MQV Sbjct: 70 ANQMGEKFSMGDDSVNLSDVMVSMQKASISFQATVQVRNKLVSAYQEMMNMQV 122 >ref|YP_546087.1| flagellar hook-basal body protein FliE [Methylobacillus flagellatus KT] gb|ABE50246.1| flagellar hook-basal body complex protein (FliE) [Methylobacillus flagellatus KT] Length = 121 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 90/122 (73%), Gaps = 12/122 (9%) Query: 5 SVIDTSKIEAMVAQLKAAAARA------QGVS--EPAQIGLKVEKAAPRVDFSEVLKGAI 56 S ID+ +IEAM+AQLKAAA + G+S PAQ +A+ RVDF++VLK +I Sbjct: 4 SAIDSGRIEAMLAQLKAAAQKPATDTAMHGISGNSPAQ----KPQASNRVDFADVLKSSI 59 Query: 57 DQVNDSQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTM 116 QVN +Q KA ++ Q+FAMGDD V+LSDVM+A QKA+IS Q +IQVRN+LVSAY+DIM M Sbjct: 60 SQVNQAQVKAEELGQSFAMGDDKVSLSDVMVAGQKANISLQATIQVRNRLVSAYQDIMNM 119 Query: 117 QV 118 QV Sbjct: 120 QV 121 >ref|YP_003050530.1| flagellar hook-basal body protein FliE [Methylovorus glucosetrophus SIP3-4] gb|ACT50003.1| flagellar hook-basal body complex subunit FliE [Methylovorus glucosetrophus SIP3-4] Length = 117 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/118 (53%), Positives = 87/118 (73%), Gaps = 1/118 (0%) Query: 1 MAIESVIDTSKIEAMVAQLKAAAARAQGVSEPAQIGLKVEKAAPRVDFSEVLKGAIDQVN 60 MAI ID+S+IE+M+AQ++AA + ++ P+VDF+E LK +++QVN Sbjct: 1 MAING-IDSSRIESMLAQIRAATQKPAMAPVAETTPASNTQSTPKVDFAETLKASLNQVN 59 Query: 61 DSQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 SQ +A ++ + FAMGDD+V+LSDVMIA QKA+ISFQ ++QVRNKLVSAY+DIM MQV Sbjct: 60 QSQLEAERLGKNFAMGDDSVSLSDVMIAGQKANISFQATLQVRNKLVSAYQDIMNMQV 117 >ref|YP_003048362.1| flagellar hook-basal body protein FliE [Methylotenera mobilis JLW8] gb|ACT47835.1| flagellar hook-basal body complex subunit FliE [Methylotenera mobilis JLW8] Length = 118 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 62/117 (52%), Positives = 87/117 (74%), Gaps = 9/117 (7%) Query: 7 IDTSKIEAMVAQLKAAAARAQ-----GVSEPAQIGLKVEKAAPRVDFSEVLKGAIDQVND 61 ID+S IE+M+AQ++AAA R Q ++ P + K+ +VDF++ LK ++DQVN Sbjct: 6 IDSSTIESMLAQMRAAAQRPQAESIANLASP----IGANKSTGKVDFADALKASLDQVNQ 61 Query: 62 SQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 Q+ A + + FA+GDD+V+LSDVMIA QKA+ISFQ +IQVRNKLVSAY+DIM+MQ+ Sbjct: 62 VQKSAETLGKNFALGDDSVSLSDVMIAGQKANISFQATIQVRNKLVSAYQDIMSMQI 118 >ref|ZP_08272777.1| Flagellar hook-basal body complex protein FliE [Oxalobacteraceae bacterium IMCC9480] gb|EGF33776.1| Flagellar hook-basal body complex protein FliE [Oxalobacteraceae bacterium IMCC9480] Length = 114 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/118 (53%), Positives = 84/118 (71%), Gaps = 11/118 (9%) Query: 5 SVIDTSKIEAMVAQLKAAAARAQGVSEPAQIGLKVEKAAP----RVDFSEVLKGAIDQVN 60 S+ID+ +IEAM++QLKAAA R QG G+ V A P + F++ LK ++D VN Sbjct: 4 SMIDSGRIEAMISQLKAAATRPQG-------GVPVVAADPTAVAKTGFADALKASLDGVN 56 Query: 61 DSQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 SQ+ A + FA+GDD V+LSDVMI+SQKA+I FQ ++QVRNKLVSAY+DIM MQ+ Sbjct: 57 ASQKTAEGLGSRFALGDDKVSLSDVMISSQKANIGFQATVQVRNKLVSAYQDIMNMQI 114 >ref|YP_003673962.1| flagellar hook-basal body complex subunit FliE [Methylotenera versatilis 301] gb|ADI29385.1| flagellar hook-basal body complex subunit FliE [Methylotenera versatilis 301] Length = 124 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/119 (52%), Positives = 84/119 (70%), Gaps = 7/119 (5%) Query: 7 IDTSKIEAMVAQLKAAAARAQG-------VSEPAQIGLKVEKAAPRVDFSEVLKGAIDQV 59 ID S+IE+M+AQLKAAA R Q + V + +V+FS+ LK +++QV Sbjct: 6 IDASRIESMLAQLKAAAQRPQADAASGLASAAGLSSTQGVSQGTSKVNFSDALKASLNQV 65 Query: 60 NDSQQKASKMSQAFAMGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 N Q +A ++ ++FAMGDD+V+LSDVMIA QKA+ISFQ ++QVRNKLVSAY DIM MQV Sbjct: 66 NKVQVEAEQLGKSFAMGDDSVSLSDVMIAGQKANISFQATVQVRNKLVSAYHDIMNMQV 124 >ref|YP_004039200.1| flagellar hook-basal body complex subunit flie [Methylovorus sp. MP688] gb|ADQ83964.1| flagellar hook-basal body complex subunit FliE [Methylovorus sp. MP688] Length = 104 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/104 (52%), Positives = 76/104 (73%) Query: 15 MVAQLKAAAARAQGVSEPAQIGLKVEKAAPRVDFSEVLKGAIDQVNDSQQKASKMSQAFA 74 M+AQ++AA + ++ P+VDF+E LK +++QVN SQ +A ++ + FA Sbjct: 1 MLAQIRAATQKPAMAPVAETTPASNTQSTPKVDFAETLKASLNQVNQSQLEAERLGKNFA 60 Query: 75 MGDDNVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 MGDD+V+LSDVMIA QKA+ISFQ ++QVRNKLVSAY+DIM MQV Sbjct: 61 MGDDSVSLSDVMIAGQKANISFQATLQVRNKLVSAYQDIMNMQV 104 >ref|NP_902807.1| flagellar hook-basal body protein FliE [Chromobacterium violaceum ATCC 12472] gb|AAQ60804.1| flagellar hook-basal body complex protein [Chromobacterium violaceum ATCC 12472] Length = 107 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 55/110 (50%), Positives = 77/110 (70%), Gaps = 7/110 (6%) Query: 10 SKIEAMVAQLKAAAARAQGVSEPAQIGLKVEKAAPRVDFSEVLKGAIDQVNDSQQKASKM 69 + I+ ++ +LK+AAA A G PA + P+VDFS+VLK I+QVN +QQ + +M Sbjct: 4 NNIDQLLGELKSAAALASGKQAPA------AQQTPQVDFSDVLKSTIEQVNSAQQTSEEM 57 Query: 70 SQAFAMGDD-NVNLSDVMIASQKASISFQTSIQVRNKLVSAYRDIMTMQV 118 + F +GD+ VNL DVM++ QKAS+SFQT +Q RNKLVSAY++IM QV Sbjct: 58 QKQFQLGDNKEVNLQDVMMSLQKASLSFQTMVQARNKLVSAYQEIMNTQV 107