BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0056.p (465 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775452.1| outer membrane drug efflux lipoprotein [Herb... 905 0.0 ref|YP_003976994.1| efflux transporter outer membrane factor lip... 431 e-118 ref|YP_901883.1| RND efflux system outer membrane lipoprotein [P... 431 e-118 gb|EFV82871.1| multidrug efflux outer membrane lipoprotein [Achr... 427 e-117 gb|EGP45570.1| efflux transporter outer membrane factor lipoprot... 426 e-117 ref|ZP_06686005.1| NodT family efflux transporter [Achromobacter... 424 e-116 ref|YP_001950643.1| NodT family RND efflux system outer membrane... 421 e-115 ref|YP_787310.1| multidrug efflux outer membrane lipoprotein [Bo... 421 e-115 ref|YP_004753744.1| outer membrane protein of RND family multidr... 421 e-115 ref|YP_004195094.1| NodT family RND efflux system, outer membran... 416 e-114 >ref|YP_003775452.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ63544.1| outer membrane drug efflux lipoprotein [Herbaspirillum seropedicae SmR1] Length = 470 Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/464 (99%), Positives = 461/464 (99%) Query: 1 MSLPVPLRLSLLLALTLLGACSPLTRSAYTPVSTQTPASWQQRGNQPEADVQRWWQGFGD 60 MSLPVP RLSLLLALTLLGACSPLTRSAYTPVSTQTPASWQQRG+QPEADVQRWWQGFGD Sbjct: 6 MSLPVPFRLSLLLALTLLGACSPLTRSAYTPVSTQTPASWQQRGSQPEADVQRWWQGFGD 65 Query: 61 ATLTALIDEALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGTSSSKQLDGDRIS 120 ATLTALIDEALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLG SSSKQLDGDRIS Sbjct: 66 ATLTALIDEALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGASSSKQLDGDRIS 125 Query: 121 TRASQSSVKLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLN 180 TRASQSSVKLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLN Sbjct: 126 TRASQSSVKLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLN 185 Query: 181 QRVATAEQSIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDN 240 QRVATAEQSIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDN Sbjct: 186 QRVATAEQSIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDN 245 Query: 241 ALAILFDQPPGKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQA 300 ALAILFDQPPGKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQA Sbjct: 246 ALAILFDQPPGKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQA 305 Query: 301 RLNYYPQLSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTA 360 RLNYYPQLSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTA Sbjct: 306 RLNYYPQLSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTA 365 Query: 361 VLNFRKGLYTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLW 420 VLNFRKGLYTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLW Sbjct: 366 VLNFRKGLYTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLW 425 Query: 421 LDQQDKRRTAEISLAQVRLNQLKNQMTLYQALGGDASVPAAISA 464 LDQQDKRRTAEISLAQVRLNQLKNQMTLYQALGGDASVPAAI A Sbjct: 426 LDQQDKRRTAEISLAQVRLNQLKNQMTLYQALGGDASVPAAIIA 469 >ref|YP_003976994.1| efflux transporter outer membrane factor lipoprotein 1 [Achromobacter xylosoxidans A8] gb|ADP14279.1| efflux transporter, outer membrane factor lipoprotein, NodT family protein 1 [Achromobacter xylosoxidans A8] Length = 478 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 231/429 (53%), Positives = 308/429 (71%), Gaps = 5/429 (1%) Query: 29 YTPVSTQTPASWQQR---GNQPE--ADVQRWWQGFGDATLTALIDEALRKNNDLALAAIK 83 + P T TPA+W QPE AD WW+ F D TL L+D AL +NNDLA AAI+ Sbjct: 30 FEPPLTSTPAAWSHAPAGSAQPEPLADGGEWWRNFSDPTLNGLVDAALARNNDLAAAAIR 89 Query: 84 LRRAQAQAGLADDAFVPALSASLGTSSSKQLDGDRISTRASQSSVKLSYEVDLWGRLAAA 143 +RRAQ QAG+ +D +P L S + ++ L GDR +R + + + +SYEVDLWG+L++ Sbjct: 90 VRRAQYQAGITEDKLLPQLGGSADVTRNRNLYGDRAISRTNAAQLTVSYEVDLWGKLSSQ 149 Query: 144 SDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLNQRVATAEQSIAYAEKTLELVRTQ 203 D ++W+ALATEQDRQS AL+L+GTTA LYW A++NQR+A++ +SIAYA KT +LVR Q Sbjct: 150 RDAAQWDALATEQDRQSAALSLVGTTATLYWQTAFINQRIASSAESIAYARKTQDLVRAQ 209 Query: 204 YQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDNALAILFDQPPGKAIALPARLPEQ 263 Y AG S++E+ A+Q + SQ++++ LVQQRVE NALAILFD PP + +A PARLP+ Sbjct: 210 YAAGGASALEMAEAEQTVASQEAAHALLVQQRVEYANALAILFDGPPDRMMADPARLPQY 269 Query: 264 ALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQARLNYYPQLSLTGTLGTSSDALLR 323 LP AGVPAELLGRRPDLRA ELR+R +L+ VD R ++YP L+LTG LG+SS L Sbjct: 270 PLPQARAGVPAELLGRRPDLRAAELRLRQSLSTVDATRASFYPPLTLTGALGSSSPTLSD 329 Query: 324 LVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTAVLNFRKGLYTAFSEVENALSARQ 383 +++NPV +LG ALTLPFLQ ++M+ + IS+AD++ V+NFR+ LY A ++VENALS R Sbjct: 330 VLKNPVGSLGAALTLPFLQWNQMQLNIKISKADYEERVVNFRQALYQAMADVENALSNRT 389 Query: 384 QYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLWLDQQDKRRTAEISLAQVRLNQLK 443 Q Q L +L AA+ AERL EVRYRAG+ L+ WLD Q+KRR AE+S + LN+L Sbjct: 390 QLRLQGEQLDASLKAAREAERLYEVRYRAGAVPLKDWLDAQEKRRVAEVSRDENMLNRLV 449 Query: 444 NQMTLYQAL 452 NQ+T+YQAL Sbjct: 450 NQVTVYQAL 458 >ref|YP_901883.1| RND efflux system outer membrane lipoprotein [Pelobacter propionicus DSM 2379] gb|ABK99825.1| RND efflux system, outer membrane lipoprotein, NodT family [Pelobacter propionicus DSM 2379] Length = 432 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 228/420 (54%), Positives = 289/420 (68%), Gaps = 3/420 (0%) Query: 37 PASWQQRGNQPEA--DVQRWWQGFGDATLTALIDEALRKNNDLALAAIKLRRAQAQAGLA 94 P WQ A + +RWW+ F D TL +LI+ AL NNDLA A IK+RRAQ + L Sbjct: 4 PQGWQGETTSGTAVANGERWWRDFNDPTLNSLIERALTTNNDLAAATIKVRRAQLNSRLT 63 Query: 95 DDAFVPALSASLGTSSSKQLDGDRISTRASQSSVKLSYEVDLWGRLAAASDLSRWEALAT 154 D P ++ +S S+ L S+ +S + +SYE+DLWG+LA+ D SRWEA AT Sbjct: 64 DTNITPTVTVEATSSVSRDLK-RHTSSESSGVTGAVSYELDLWGKLASNRDASRWEAEAT 122 Query: 155 EQDRQSTALTLIGTTANLYWTGAYLNQRVATAEQSIAYAEKTLELVRTQYQAGAVSSVEV 214 E DRQSTAL+LI TTA YW AYLN+R+AT E SIAYA K L+LV +Y AGAVSS+++ Sbjct: 123 ESDRQSTALSLIATTAKDYWQIAYLNERIATTEASIAYARKCLDLVEVKYNAGAVSSLDL 182 Query: 215 LSAQQNLYSQQSSYTELVQQRVENDNALAILFDQPPGKAIALPARLPEQALPVLAAGVPA 274 + A+Q L SQ++ T+L++QR E NALAILFDQ P ++ RLP LP ++A +PA Sbjct: 183 VQARQTLASQRAGLTDLIRQRTEARNALAILFDQAPQNSVPERERLPAGPLPAVSADLPA 242 Query: 275 ELLGRRPDLRALELRIRSALAGVDQARLNYYPQLSLTGTLGTSSDALLRLVQNPVATLGG 334 LLGRRPDLRA E R+R LA VD R +YYP SLTGTLGTSS +LL +QNP A LG Sbjct: 243 SLLGRRPDLRAAEQRLRKYLANVDYTRASYYPAFSLTGTLGTSSTSLLSFLQNPYAALGA 302 Query: 335 ALTLPFLQHSEMKFKVGISQADFDTAVLNFRKGLYTAFSEVENALSARQQYARQQALLVR 394 +LTLPF+Q + MK V IS+ +++ AV+NFR+ LY A S+VENALS R QY + + L Sbjct: 303 SLTLPFIQWNTMKLDVAISKTEYEEAVVNFRQTLYAALSDVENALSGRVQYEEENSCLEE 362 Query: 395 NLDAAQAAERLLEVRYRAGSATLQLWLDQQDKRRTAEISLAQVRLNQLKNQMTLYQALGG 454 +L A+ AE L EVRYRAG+ LQLWLD Q+ RR+AE SL + RLN+LKN MTLYQALGG Sbjct: 363 SLSLARKAEELAEVRYRAGATELQLWLDGQESRRSAENSLVENRLNRLKNLMTLYQALGG 422 >gb|EFV82871.1| multidrug efflux outer membrane lipoprotein [Achromobacter xylosoxidans C54] Length = 425 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 226/402 (56%), Positives = 294/402 (73%) Query: 54 WWQGFGDATLTALIDEALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGTSSSKQ 113 WW+ F D L L+D AL +NNDLA AAI++RRAQ QAGLA D +P LS + + ++ Sbjct: 9 WWRNFNDPVLDGLVDGALARNNDLAAAAIRVRRAQLQAGLAQDQLIPQLSGTGNVTRARN 68 Query: 114 LDGDRISTRASQSSVKLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLY 173 L G+R TR + + + + YEVDLWG+L+ D + WEALA+EQDRQS+AL+L+GTTA LY Sbjct: 69 LRGEREITRTNSAELSIGYEVDLWGKLSRQLDAAEWEALASEQDRQSSALSLVGTTATLY 128 Query: 174 WTGAYLNQRVATAEQSIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQ 233 W A++NQR+A++ +SIAYA KT ELVR QY AG S++EV A+Q + SQQ+++ LVQ Sbjct: 129 WQTAFINQRIASSLESIAYARKTQELVRAQYAAGGASALEVAEAEQTVASQQAAHALLVQ 188 Query: 234 QRVENDNALAILFDQPPGKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSA 293 QRVE NALAILFD PP + +A P RLP+ LP GVPAELLGRRPDLRA ELR+R + Sbjct: 189 QRVEYVNALAILFDGPPDRVMADPQRLPQYPLPQAREGVPAELLGRRPDLRAAELRLRES 248 Query: 294 LAGVDQARLNYYPQLSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGIS 353 L+ +D AR ++YP L+LTG LG+SS L ++QNPV TL GALTLPFLQ + + + +S Sbjct: 249 LSNIDAARASFYPTLNLTGALGSSSPTLSNVLQNPVGTLTGALTLPFLQFNRLNLNLKVS 308 Query: 354 QADFDTAVLNFRKGLYTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAG 413 +ADFD V++FR+ LY A ++VENALS R Q Q L +L AA+ AERL EVRYRAG Sbjct: 309 RADFDERVVSFRQALYQAMADVENALSNRTQLRLQAEQLDASLKAAREAERLYEVRYRAG 368 Query: 414 SATLQLWLDQQDKRRTAEISLAQVRLNQLKNQMTLYQALGGD 455 S +L+ WLD Q+KRRTAEI+ + LN+L NQ+ +YQALGGD Sbjct: 369 SVSLRFWLDAQEKRRTAEIARDENALNRLINQVKVYQALGGD 410 >gb|EGP45570.1| efflux transporter outer membrane factor lipoprotein 1 [Achromobacter xylosoxidans AXX-A] Length = 482 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 230/442 (52%), Positives = 306/442 (69%), Gaps = 6/442 (1%) Query: 20 ACSPLTRSAYTPVSTQTPASWQQRGNQPEADVQR------WWQGFGDATLTALIDEALRK 73 C L +S Y +TQ PA+W + +A WW+ F D L L+D AL + Sbjct: 21 GCGGLLKSDYQTPATQAPAAWSHGADAAQAPASALAAGGAWWRNFNDPVLDGLVDGALAR 80 Query: 74 NNDLALAAIKLRRAQAQAGLADDAFVPALSASLGTSSSKQLDGDRISTRASQSSVKLSYE 133 NNDLA AAI++RRAQ QAGLA D +P LS + + ++ L G+R TR + + + + YE Sbjct: 81 NNDLAAAAIRVRRAQLQAGLAQDQLIPQLSGNGSVTRTRNLRGEREITRTNSAELSIGYE 140 Query: 134 VDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLNQRVATAEQSIAYA 193 VDLWG+L+ D + WEALA+EQDRQS+AL+L+GTTA LYW A++NQR+A++ +SIAYA Sbjct: 141 VDLWGKLSRQLDAAEWEALASEQDRQSSALSLVGTTATLYWQTAFINQRIASSLESIAYA 200 Query: 194 EKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDNALAILFDQPPGKA 253 KT +LVR QY AG S++E+ A+Q + SQQ+++ LVQQRVE NALAILFD PP + Sbjct: 201 RKTQDLVRAQYAAGGASALEMAEAEQTVASQQAAHALLVQQRVEYVNALAILFDGPPDRT 260 Query: 254 IALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQARLNYYPQLSLTGT 313 +A P RLP+ LP GVPAELLGRRPDLRA ELR+R +L+ +D A ++YP L+LTG Sbjct: 261 MADPQRLPQYPLPQAREGVPAELLGRRPDLRAAELRLRESLSNIDAAHASFYPTLNLTGA 320 Query: 314 LGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTAVLNFRKGLYTAFS 373 LG++S L ++QNPV TL GALTLPFLQ + + + +S+ DFD V++FR+ LY A + Sbjct: 321 LGSTSPTLSNVLQNPVGTLTGALTLPFLQFNRLNLNLKVSRTDFDERVVSFRQALYQAMA 380 Query: 374 EVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLWLDQQDKRRTAEIS 433 +VENALS R Q Q L +L AA+ AERL EVRYRAGS +L+ WLD Q+KRR AEI+ Sbjct: 381 DVENALSNRTQLRLQAEQLEASLKAAREAERLYEVRYRAGSVSLRFWLDAQEKRRAAEIA 440 Query: 434 LAQVRLNQLKNQMTLYQALGGD 455 + LN+L NQ+ +YQALGGD Sbjct: 441 RDENGLNRLVNQVKVYQALGGD 462 >ref|ZP_06686005.1| NodT family efflux transporter [Achromobacter piechaudii ATCC 43553] gb|EFF77080.1| NodT family efflux transporter [Achromobacter piechaudii ATCC 43553] Length = 470 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 236/445 (53%), Positives = 312/445 (70%), Gaps = 4/445 (0%) Query: 20 ACSPLTRSAYTPVSTQTPASWQQ----RGNQPEADVQRWWQGFGDATLTALIDEALRKNN 75 C L R+ Y P TQ PA+W P A WW+ F D L LID L +NN Sbjct: 24 GCGSLLRTDYEPPLTQVPAAWTYGDPANAQAPLAQGGAWWRNFDDPVLDGLIDAVLARNN 83 Query: 76 DLALAAIKLRRAQAQAGLADDAFVPALSASLGTSSSKQLDGDRISTRASQSSVKLSYEVD 135 DLA AAI++RRAQ QAGL +D +P L + ++ L GDR TR +Q+ + +SYEVD Sbjct: 84 DLAAAAIRVRRAQYQAGLTEDQLIPQLGGDASLTRNRNLYGDRAITRGNQAQLTVSYEVD 143 Query: 136 LWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLNQRVATAEQSIAYAEK 195 LWG+L+ D ++WEALATEQDRQS AL+L+GTTA LYW A++NQR+A++E+SIAYA + Sbjct: 144 LWGKLSRQRDAAQWEALATEQDRQSAALSLVGTTATLYWQTAFINQRIASSEESIAYARR 203 Query: 196 TLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDNALAILFDQPPGKAIA 255 T +LVR QY AG S++E+ A+Q + SQQ+++ LVQQRVE NAL ILFD PP +++A Sbjct: 204 TQDLVRAQYAAGGASALELAEAEQTVASQQAAHALLVQQRVEYTNALTILFDGPPDRSMA 263 Query: 256 LPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQARLNYYPQLSLTGTLG 315 P RLP LP AGVPA+LLGRRPDLRA E+R+R +LA VD R ++YP ++LTG +G Sbjct: 264 NPPRLPPYPLPEARAGVPADLLGRRPDLRAAEMRLRESLANVDATRSSFYPPVTLTGAVG 323 Query: 316 TSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTAVLNFRKGLYTAFSEV 375 ++S L ++QNPVATLG LTLPFLQ ++M+ + IS+AD++ V+NFR+ LY A ++V Sbjct: 324 SASPTLSNMLQNPVATLGVGLTLPFLQWNQMQLNIKISKADYEERVVNFRQALYQAMADV 383 Query: 376 ENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLWLDQQDKRRTAEISLA 435 ENALS R Q Q L +L AA+ AERL EVRYRAG+ +L+ WLD Q+KRRTAEI+ Sbjct: 384 ENALSNRTQLTLQGEQLALSLRAAREAERLYEVRYRAGAVSLKDWLDAQEKRRTAEIARD 443 Query: 436 QVRLNQLKNQMTLYQALGGDASVPA 460 + LN+L NQ+T+Y+ALGGD V A Sbjct: 444 ENGLNRLVNQVTVYRALGGDDQVQA 468 >ref|YP_001950643.1| NodT family RND efflux system outer membrane lipoprotein [Geobacter lovleyi SZ] gb|ACD94123.1| RND efflux system, outer membrane lipoprotein, NodT family [Geobacter lovleyi SZ] Length = 464 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/452 (50%), Positives = 301/452 (66%), Gaps = 4/452 (0%) Query: 11 LLLALTLLGACSPL-TRSAYTPVSTQTPASWQQRG--NQPEADVQRWWQGFGDATLTALI 67 +L L CS L RS YT P WQ G A ++WW+ + D TL+ LI Sbjct: 12 VLPICCFLAGCSGLLPRSQYTRPEVTLPRQWQATGVTGSAVATKRQWWRDYNDQTLSELI 71 Query: 68 DEALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGTSSSKQLDGDRISTRASQSS 127 + ALR NN+LA A IK++RAQ A L + P +SA L +S S+ L R T++S ++ Sbjct: 72 ELALRSNNNLAAATIKVKRAQLSARLTNTNLTPTVSADLSSSLSRDLT-TRSETKSSGAT 130 Query: 128 VKLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLNQRVATAE 187 + SYE+DLWG+LA+A D S+WEA ATE DRQSTAL L+GT A YWT AYLN+R+A+ + Sbjct: 131 LSASYELDLWGKLASARDASKWEAEATEYDRQSTALALVGTVATNYWTIAYLNERIASVD 190 Query: 188 QSIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDNALAILFD 247 SI AE+ L LV +YQAGAVS+++ L AQQ + SQ++ TEL QQR E NALAILF+ Sbjct: 191 ASILNAERVLGLVEVKYQAGAVSALDKLQAQQTVASQKAQLTELWQQRTEARNALAILFN 250 Query: 248 QPPGKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQARLNYYPQ 307 Q P + RLPE ALP + AG+PA LLG+RPDL+A E R++ LA VD R +YYP Sbjct: 251 QAPEHTVPERQRLPEGALPQVQAGLPASLLGQRPDLQAAEQRLKKYLANVDTTRASYYPS 310 Query: 308 LSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTAVLNFRKG 367 +LTGTLG SS +L+ +V+NP A LG L LPF+Q + M+ V +QAD++ AV+NFR+ Sbjct: 311 FTLTGTLGRSSTSLVEVVKNPYAALGAGLVLPFIQWNTMRLHVETAQADYEEAVVNFRQT 370 Query: 368 LYTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLWLDQQDKR 427 LY A S+VENAL+AR+ YA + L +LD A+ AE+L EVRY GS LQ WLD Q++R Sbjct: 371 LYAALSDVENALAARKNYAEELKQLQDSLDLAKKAEQLAEVRYLTGSTDLQTWLDTQERR 430 Query: 428 RTAEISLAQVRLNQLKNQMTLYQALGGDASVP 459 R AE + A VRL QLKN M LYQ +GG ++P Sbjct: 431 RDAERAFAVVRLAQLKNSMALYQVIGGTTALP 462 >ref|YP_787310.1| multidrug efflux outer membrane lipoprotein [Bordetella avium 197N] emb|CAJ50423.1| multidrug efflux outer membrane lipoprotein [Bordetella avium 197N] Length = 454 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 235/448 (52%), Positives = 317/448 (70%) Query: 11 LLLALTLLGACSPLTRSAYTPVSTQTPASWQQRGNQPEADVQRWWQGFGDATLTALIDEA 70 L+L LL A L R+ Y P + QTPA WQ A WW+ F D L L++ A Sbjct: 5 LMLGAPLLLAACGLMRTPYHPPAVQTPAEWQYAPQATAASGGMWWRNFQDPVLDTLVEAA 64 Query: 71 LRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGTSSSKQLDGDRISTRASQSSVKL 130 L +NNDLA+AA+K+RRAQ QAGLA P LS + + ++ L+G+R +TR++ + Sbjct: 65 LARNNDLAVAALKVRRAQLQAGLAQADLHPTLSGTGSFNRNRALNGERATTRSTNVELAA 124 Query: 131 SYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLNQRVATAEQSI 190 S+E+DLWGRL++A D + W+A ATEQDRQS AL+LIGTTA LYW A+LNQR+A++ +SI Sbjct: 125 SWELDLWGRLSSARDAADWQAAATEQDRQSAALSLIGTTAKLYWQTAFLNQRMASSRESI 184 Query: 191 AYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDNALAILFDQPP 250 AYA +TLELV+TQY+AG S +E+ A++NL Q+++Y EL QQ+VE N L ILFD PP Sbjct: 185 AYARRTLELVQTQYEAGGASGLEIAEAKENLAGQEAAYIELQQQKVEAVNGLTILFDGPP 244 Query: 251 GKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQARLNYYPQLSL 310 + A P RLP+ LP + AG+PA LLGRRPDLRA E R+R+A+A D R +YYP LSL Sbjct: 245 DRVAADPQRLPQGMLPGVDAGLPAGLLGRRPDLRAAEARLRAAMATSDATRASYYPSLSL 304 Query: 311 TGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTAVLNFRKGLYT 370 TG LG++S++L L+ NPVA LG L+LPFL ++M+ + I++AD++ V FR+ LY Sbjct: 305 TGALGSASNSLGNLLANPVAALGSGLSLPFLNWNQMRLNLRIAEADYEILVAQFRQALYQ 364 Query: 371 AFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLWLDQQDKRRTA 430 A ++VEN LSAR Q AR+ LL L+A++ AERL EVRYRAG+ L++WLD Q+KRR A Sbjct: 365 AMADVENTLSARAQLARRARLLEAALEASRDAERLYEVRYRAGAVALRVWLDAQEKRRNA 424 Query: 431 EISLAQVRLNQLKNQMTLYQALGGDASV 458 EI++ RL QL+NQ+ +YQALGGDA+V Sbjct: 425 EIAVDDNRLQQLRNQVDVYQALGGDAAV 452 >ref|YP_004753744.1| outer membrane protein of RND family multidrug efflux pump [Collimonas fungivorans Ter331] gb|AEK62921.1| Outer membrane protein of RND family multidrug efflux pump [Collimonas fungivorans Ter331] Length = 501 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 227/447 (50%), Positives = 298/447 (66%), Gaps = 6/447 (1%) Query: 12 LLALTLLGACSPLTRSAYTPVSTQTPASWQQRGNQPEADV---QRWWQGFGDATLTALID 68 L A LL ACS L + Y PV+ TP +WQ + + D RWW+ F D L L++ Sbjct: 44 LFACGLLAACSTL-HTPYQPVAVTTPPAWQNKSAENAGDAVRQDRWWRNFNDPQLDQLVE 102 Query: 69 EALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGTSSSKQLDGDRISTRASQSSV 128 AL +NNDLA A + ++RAQ QAGLA P ++ ++ +S+S+ L G + TR + Sbjct: 103 LALARNNDLAAATVLVQRAQLQAGLA--TINPTVALNVSSSNSRNLRGSPVGTRNQTLTG 160 Query: 129 KLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLNQRVATAEQ 188 +SYE+DLWG+LA+ D + WEALAT +DR STAL L GTTA LYW A L QR+A +EQ Sbjct: 161 SVSYELDLWGKLASRRDAAEWEALATAEDRDSTALALAGTTATLYWKIANLQQRIAVSEQ 220 Query: 189 SIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDNALAILFDQ 248 S+AY K LELVR QY AGAVSS+E+L A+++L SQQ+S+T+L+Q+ VE ALA+LFD Sbjct: 221 SMAYVGKILELVRLQYDAGAVSSLELLEAERSLASQQASHTQLLQELVETRAALALLFDG 280 Query: 249 PPGKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQARLNYYPQL 308 PP A +L LP + AG+P++LLGRRPDL A ELR+R LA +D R +YYP L Sbjct: 281 PPELRYAESGKLAVAVLPAVDAGLPSQLLGRRPDLHAAELRLRKLLASIDDTRASYYPSL 340 Query: 309 SLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTAVLNFRKGL 368 LTGTLG+SS AL L+QNP+ TLG L PFLQ ++M+ + +S+AD+D A ++FR+ Sbjct: 341 VLTGTLGSSSTALSNLLQNPIGTLGATLAFPFLQWNQMRLNIAVSKADYDKAAIDFRQAF 400 Query: 369 YTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLWLDQQDKRR 428 Y A S+VE ALSAR Q+ Q L + L AA E L E RYRAG+ L+ WLD Q+ RR Sbjct: 401 YKALSDVETALSARSQFQAQGQKLSQALAAASRIEGLYEERYRAGAVPLKTWLDAQETRR 460 Query: 429 TAEISLAQVRLNQLKNQMTLYQALGGD 455 AEI+LA LN L +Q+ LYQALGGD Sbjct: 461 NAEIALADNNLNLLTSQVKLYQALGGD 487 >ref|YP_004195094.1| NodT family RND efflux system, outer membrane lipoprotein [Desulfobulbus propionicus DSM 2032] gb|ADW17803.1| RND efflux system, outer membrane lipoprotein, NodT family [Desulfobulbus propionicus DSM 2032] Length = 473 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 226/458 (49%), Positives = 305/458 (66%), Gaps = 1/458 (0%) Query: 9 LSLLLALTLLGACSPLTRSAYTPVSTQTPASWQQRGNQPEADVQRWWQGFGDATLTALID 68 S L + +L C LT + YT + PASW R + RWW+GF D L L+ Sbjct: 9 FSTALVVLVLSGCGALTHTPYTTPEARLPASWTHRSEVGKVLADRWWEGFDDPVLNQLVG 68 Query: 69 EALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGTSSSKQLDGDRISTRASQSSV 128 EALR+NNDLA A + +R+A QA LAD +P+L+ T S+ L TR S Sbjct: 69 EALRRNNDLAAATVLVRKAALQAELADSDRLPSLAVGGSTDYSRNLGAKSGETRTVAVSA 128 Query: 129 KLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWTGAYLNQRVATAEQ 188 + YE+DLW RL + SD +RW+A+AT++DR STAL+L+GTTA+LYW YLNQR++ +E Sbjct: 129 AVGYELDLWNRLGSTSDAARWQAVATDEDRASTALSLVGTTASLYWQIGYLNQRISLSEA 188 Query: 189 SIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQRVENDNALAILFDQ 248 SIAYA +TLELVR Q AGAV+++E+L A+++L SQ++S+T LVQQRVE N+LAILFD Sbjct: 189 SIAYARRTLELVRVQKAAGAVTTLEILEAERSLASQEASHTSLVQQRVEARNSLAILFDG 248 Query: 249 PPGK-AIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALAGVDQARLNYYPQ 307 PP AI P L LP + AG+PA LL RRPDLRA E R+RS LA D R +YYP Sbjct: 249 PPQSLAIREPQDLTTVILPGVEAGLPASLLARRPDLRAAEARLRSLLASSDATRASYYPA 308 Query: 308 LSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQADFDTAVLNFRKG 367 +SL+G+ G SS+ L RL+ NP+A LG L LPF+Q +M+ + I++A+++ AVL FR+ Sbjct: 309 ISLSGSFGGSSEELSRLLSNPIAALGAELALPFIQWRDMRRTIKIAEAEYEQAVLEFRQT 368 Query: 368 LYTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSATLQLWLDQQDKR 427 LY A +EVEN+LSARQQY ++ L + L AA+ E L +RY+AG + L+ WLD Q+ R Sbjct: 369 LYRALAEVENSLSARQQYRMEEEKLQQTLAAAKRTEELYRIRYQAGGSALKSWLDAQEDR 428 Query: 428 RTAEISLAQVRLNQLKNQMTLYQALGGDASVPAAISAR 465 R AEI+LA+ R NQL+N +TL +ALGG+ P S+ Sbjct: 429 RQAEINLAENRFNQLQNHITLAKALGGETRRPGQSSSH 466