BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0051.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775447.1| flagellar basal-body L-ring protein [Herbasp... 397 e-109 ref|YP_001100169.1| basal-body outer-membrane L (lipopolysacchar... 260 8e-68 ref|YP_001353114.1| FlgH flagellar basal body L-ring protein [Ja... 239 2e-61 ref|YP_315389.1| flagellar L-ring protein FlgH [Thiobacillus den... 225 3e-57 ref|YP_004039218.1| flagellar l-ring protein [Methylovorus sp. M... 225 4e-57 ref|YP_003050548.1| flagellar L-ring protein [Methylovorus gluco... 225 4e-57 ref|YP_546068.1| flagellar L-ring protein [Methylobacillus flage... 213 2e-53 ref|ZP_08272758.1| Flagellar L-ring protein FlgH [Oxalobacterace... 212 4e-53 ref|YP_004695396.1| Flagellar L-ring protein [Nitrosomonas sp. I... 197 1e-48 ref|YP_003048380.1| flagellar L-ring protein [Methylotenera mobi... 189 3e-46 >ref|YP_003775447.1| flagellar basal-body L-ring protein [Herbaspirillum seropedicae SmR1] gb|ADJ63539.1| flagellar basal-body L-ring protein [Herbaspirillum seropedicae SmR1] Length = 219 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 212/219 (96%), Positives = 217/219 (99%) Query: 1 MKSMLKWVTLAGILAVAGCTTVPDSIVEGPKSARPQPASYAPPTSGAIFQGAVYRPLLED 60 MKSMLKWVTLAGILAVAGCTTVPDSIV GPKSARPQPASYAPPTSGAIFQGAVYRPLLED Sbjct: 1 MKSMLKWVTLAGILAVAGCTTVPDSIVAGPKSARPQPASYAPPTSGAIFQGAVYRPLLED 60 Query: 61 RRARLVGDTLTIVINERTSAGKSAASSASKTGAVNSPAPTFFGTSIKELSASGSSSAKFD 120 RRARLVGDTLTIVINE+TSAGKSAASSASKTGAVNSP PTFFGTSIKEL+A+GSSSAKFD Sbjct: 61 RRARLVGDTLTIVINEKTSAGKSAASSASKTGAVNSPVPTFFGTSIKELTANGSSSAKFD 120 Query: 121 DKGATTSSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNIQTGN 180 DKGATTSSNTFTGTIGVTV+EVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNIQTGN Sbjct: 121 DKGATTSSNTFTGTIGVTVVEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNIQTGN 180 Query: 181 TVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 TVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFS+SPF Sbjct: 181 TVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSISPF 219 >ref|YP_001100169.1| basal-body outer-membrane L (lipopolysaccharide layer) ring protein [Herminiimonas arsenicoxydans] sp|A4G6A8.1|FLGH_HERAR RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor emb|CAL62045.1| Flagellar L-ring protein precursor (Basal body L-ring protein) [Herminiimonas arsenicoxydans] Length = 223 Score = 260 bits (665), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 132/223 (59%), Positives = 163/223 (73%), Gaps = 4/223 (1%) Query: 1 MKSMLKWVTLAGILAVAGCTTVPDSIVEGPKSARPQPAS-YAPPTSGAIFQGAVYRPLLE 59 MK L + + G ++ C PD+IV P +ARPQ AS APP +GAIFQ A YRP+ E Sbjct: 1 MKKSLMALIVVGSFLLSACALRPDTIVNTPLTARPQAASTIAPPANGAIFQAAAYRPMFE 60 Query: 60 DRRARLVGDTLTIVINERTSAGKSAASSASKTGAVNSPAPTFFG---TSIKELSASGSSS 116 DRRARL+GDT+TIVINE++SAGK A S+ASKTG+V + AP FG + LSASGS++ Sbjct: 61 DRRARLIGDTITIVINEKSSAGKQAGSAASKTGSVTASAPNVFGLLGSLTNRLSASGSNA 120 Query: 117 AKFDDKGATTSSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNI 176 K++DKGA TSSN F T+ VTVI+VL NGNL+VAGEKQV+LDKG E++RFSG V P + Sbjct: 121 IKYEDKGAVTSSNNFISTMTVTVIDVLSNGNLIVAGEKQVSLDKGSEFIRFSGVVDPSTV 180 Query: 177 QTGNTVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 +GN VSST VADAK+EYRTN+ VD A+ S L RFF SV P Sbjct: 181 NSGNIVSSTQVADAKIEYRTNSTVDGAEVASMLARFFLSVLPL 223 >ref|YP_001353114.1| FlgH flagellar basal body L-ring protein [Janthinobacterium sp. Marseille] gb|ABR88821.1| FlgH flagellar basal body L-ring protein [Janthinobacterium sp. Marseille] Length = 222 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 129/223 (57%), Positives = 159/223 (71%), Gaps = 5/223 (2%) Query: 1 MKSMLKWVTLAGILAVAGCTTVPDSIVEGPKSARPQPAS-YAPPTSGAIFQGAVYRPLLE 59 MK L + + L +AGC +P+++V+ P +A+PQ AS PP +GAIFQ A YRP+ E Sbjct: 1 MKFKLSALMMFAAL-LAGCGGMPETVVQTPLTAKPQSASSITPPMNGAIFQTASYRPMFE 59 Query: 60 DRRARLVGDTLTIVINERTSAGKSAASSASKTGAVNSPAPT---FFGTSIKELSASGSSS 116 DRRARL+GDT+TI INER+SAGK A SS SKTG V + AP+ FG SAS SS+ Sbjct: 60 DRRARLIGDTITITINERSSAGKQAGSSGSKTGTVAAAAPSIFGLFGNVTDNFSASASSA 119 Query: 117 AKFDDKGATTSSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNI 176 +K++DKG TS N F T+ VTVI+VL NGNLVVAGEKQVALDKG E++RFSG V P + Sbjct: 120 SKYEDKGVVTSGNNFVSTLTVTVIDVLSNGNLVVAGEKQVALDKGGEFIRFSGVVDPATV 179 Query: 177 QTGNTVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 GN VSST VADA++EYRTN R+D A+ MS L RFF SV P Sbjct: 180 GPGNVVSSTRVADARIEYRTNARIDAAEVMSMLARFFLSVMPL 222 >ref|YP_315389.1| flagellar L-ring protein FlgH [Thiobacillus denitrificans ATCC 25259] sp|Q3SIE4.1|FLGH_THIDA RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor gb|AAZ97584.1| flagellar L-ring protein precursor FlgH [Thiobacillus denitrificans ATCC 25259] Length = 222 Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 118/209 (56%), Positives = 141/209 (67%), Gaps = 13/209 (6%) Query: 19 CTTVPDSIVEGPKSARPQPASYAPPTSGAIFQGAVYRPLLEDRRARLVGDTLTIVINERT 78 C T P +IVE P +ARPQ + P T+GAI+Q A YRPL EDRRAR VGD LTIVINERT Sbjct: 19 CGTTPSTIVERPTTARPQAPAAVPATNGAIYQAATYRPLFEDRRARHVGDVLTIVINERT 78 Query: 79 SAGKSAAS--------SASKTGAVNSPAPTFFGTSIKELSASGSSSAKFDDKGATTSSNT 130 AGK A+S AS G P F G I + +SA+++D+ A SSNT Sbjct: 79 RAGKEASSSASKTSAVDASVGGVAKLPLKMFQGLGI-----NAEASAEYEDESALDSSNT 133 Query: 131 FTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNIQTGNTVSSTLVADA 190 F+G + VTVIEVLPNGNLVVAGEKQ+ LDKG EY+R SG V PD IQ GNTVSS VADA Sbjct: 134 FSGNVTVTVIEVLPNGNLVVAGEKQIGLDKGTEYIRLSGVVQPDTIQAGNTVSSAKVADA 193 Query: 191 KVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 ++EYR++ + D A+ M+ LGRFF S P Sbjct: 194 RIEYRSSAKFDKAEVMNWLGRFFLSFIPL 222 >ref|YP_004039218.1| flagellar l-ring protein [Methylovorus sp. MP688] gb|ADQ83982.1| flagellar L-ring protein [Methylovorus sp. MP688] Length = 230 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 118/219 (53%), Positives = 147/219 (67%), Gaps = 2/219 (0%) Query: 1 MKSMLKWVTLAGILAVAGCTTVPDSIVEGPKSARPQPASYAPPTSGAIFQGAVYRPLLED 60 +K + + AG L ++ CT P SI +GP + +P PAS PPT+GAI+ A YRPL ED Sbjct: 14 LKPAVLGLLAAGALTLSACT--PTSITQGPLTTKPYPASARPPTNGAIYNVAAYRPLFED 71 Query: 61 RRARLVGDTLTIVINERTSAGKSAASSASKTGAVNSPAPTFFGTSIKELSASGSSSAKFD 120 RRARL+GDTL I I E TSA K+ SSASK G+V+S FG+ + + + +S + Sbjct: 72 RRARLIGDTLMINITENTSATKANGSSASKKGSVDSSVTASFGSPLPRAAFNSASDLSYT 131 Query: 121 DKGATTSSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNIQTGN 180 D A +SN FTG+I VTV++VLPNG LVV GEKQVALDKG E+VR SG V+PD I N Sbjct: 132 DAAAANASNVFTGSIAVTVLDVLPNGYLVVGGEKQVALDKGTEFVRLSGVVNPDTITAAN 191 Query: 181 TVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 TV ST VADA++EYRTN+RVD A S L RFF S P Sbjct: 192 TVPSTRVADARIEYRTNSRVDAALVTSILSRFFLSFIPL 230 >ref|YP_003050548.1| flagellar L-ring protein [Methylovorus glucosetrophus SIP3-4] gb|ACT50021.1| flagellar L-ring protein [Methylovorus glucosetrophus SIP3-4] Length = 228 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 118/219 (53%), Positives = 147/219 (67%), Gaps = 2/219 (0%) Query: 1 MKSMLKWVTLAGILAVAGCTTVPDSIVEGPKSARPQPASYAPPTSGAIFQGAVYRPLLED 60 +K + + AG L ++ CT P SI +GP + +P PAS PPT+GAI+ A YRPL ED Sbjct: 12 LKPAVLGLLAAGALTLSACT--PTSITQGPLTTKPYPASARPPTNGAIYNVAAYRPLFED 69 Query: 61 RRARLVGDTLTIVINERTSAGKSAASSASKTGAVNSPAPTFFGTSIKELSASGSSSAKFD 120 RRARL+GDTL I I E TSA K+ SSASK G+V+S FG+ + + + +S + Sbjct: 70 RRARLIGDTLMINITENTSATKANGSSASKKGSVDSSVTASFGSPVPRAAFNSASDLSYT 129 Query: 121 DKGATTSSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNIQTGN 180 D A +SN FTG+I VTV++VLPNG LVV GEKQVALDKG E+VR SG V+PD I N Sbjct: 130 DAAAANASNVFTGSIAVTVLDVLPNGYLVVGGEKQVALDKGTEFVRLSGVVNPDTITAAN 189 Query: 181 TVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 TV ST VADA++EYRTN+RVD A S L RFF S P Sbjct: 190 TVPSTRVADARIEYRTNSRVDAALVTSILSRFFLSFIPL 228 >ref|YP_546068.1| flagellar L-ring protein [Methylobacillus flagellatus KT] sp|Q1GZW0.1|FLGH_METFK RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor gb|ABE50227.1| flagellar L-ring protein [Methylobacillus flagellatus KT] Length = 222 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 112/213 (52%), Positives = 144/213 (67%) Query: 7 WVTLAGILAVAGCTTVPDSIVEGPKSARPQPASYAPPTSGAIFQGAVYRPLLEDRRARLV 66 W+ L +L +GC P +I + P +ARP S A SG I+ A YRPLLED+RARLV Sbjct: 10 WLILGLLLLGSGCAVTPKTITQVPNTARPAAPSQAVYNSGGIYSPATYRPLLEDKRARLV 69 Query: 67 GDTLTIVINERTSAGKSAASSASKTGAVNSPAPTFFGTSIKELSASGSSSAKFDDKGATT 126 GDT+ I I E TSA KS ++SASK+GAVN+ FG ++ + S + +S +DD A+ Sbjct: 70 GDTIVINITENTSATKSGSNSASKSGAVNAGITGLFGHNVPKASFNAASDNAYDDAAASN 129 Query: 127 SSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNIQTGNTVSSTL 186 S N FTGTI TV EVLPNG+LVV+GEKQVA D+G E+VRFSG V P + GN+V S+ Sbjct: 130 SRNVFTGTISATVTEVLPNGHLVVSGEKQVAFDRGTEFVRFSGVVDPMYVAAGNSVPSSR 189 Query: 187 VADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 VADA++EYRTN+ +D A MS L RFF S +P Sbjct: 190 VADARIEYRTNSNLDTAQVMSILTRFFLSFAPL 222 >ref|ZP_08272758.1| Flagellar L-ring protein FlgH [Oxalobacteraceae bacterium IMCC9480] gb|EGF33757.1| Flagellar L-ring protein FlgH [Oxalobacteraceae bacterium IMCC9480] Length = 224 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 159/224 (70%), Gaps = 6/224 (2%) Query: 1 MKSMLKWVTLAGILAV-AGCTTVPDSIVEGPK-SARPQPASYAPPTSGAIFQGAVYRPLL 58 M M++ ++ +++V +GC P +IV P A P+P A ++GAIFQ A YRPL Sbjct: 2 MTVMMRLCSVLLLVSVFSGCAVTPTTIVSRPAIPAAPRPLPLAA-SNGAIFQTAAYRPLF 60 Query: 59 EDRRARLVGDTLTIVINERTSAGKSAASSASKTGAVNSPAPTFFG---TSIKELSASGSS 115 EDRRARL+GDTLTI INE+T+AGK+ A+S+SK+G+ N P FG T+ +L+ + + Sbjct: 61 EDRRARLIGDTLTITINEKTTAGKAGAASSSKSGSANLAVPKLFGAPTTTTADLAFNATG 120 Query: 116 SAKFDDKGATTSSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDN 175 K+DDKGA TS+N F GTIGVTV++VL NG LVV+GEKQ+ LD+G E++RFSG V+PD Sbjct: 121 GNKYDDKGAATSNNNFNGTIGVTVVDVLANGYLVVSGEKQIGLDRGTEFIRFSGVVNPDF 180 Query: 176 IQTGNTVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 I GN V+ST VADA+VEYRTNT +D A+ M L RFF SV P Sbjct: 181 IVGGNNVASTQVADARVEYRTNTHIDPAEMMGLLTRFFLSVIPL 224 >ref|YP_004695396.1| Flagellar L-ring protein [Nitrosomonas sp. Is79A3] gb|AEJ01997.1| Flagellar L-ring protein [Nitrosomonas sp. Is79A3] Length = 238 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 106/230 (46%), Positives = 143/230 (62%), Gaps = 13/230 (5%) Query: 2 KSMLKWVTLAGILAVAGCTTVPDSIVEGPKSAR-PQPASYAPPTSGAIFQ-------GAV 53 K L TL +L V+GC P ++ P + R P+ A+ A +GAIFQ G Sbjct: 10 KQFLCLYTLIFVLLVSGCAMTPPTVTHQPNTFRSPKHAAVATHPNGAIFQTIHSTTGGVR 69 Query: 54 YRPLLEDRRARLVGDTLTIVINERTSAGKSAASSASKTGAVNSPAPTFFGTSI----KEL 109 Y PL EDRRAR VGDTL + +NE T+A KS+ S+ ++G+++ P+ G + K Sbjct: 70 YTPLFEDRRARSVGDTLIVNLNETTNASKSSGSNVDRSGSIDFSVPSLLGIPLSLLKKHA 129 Query: 110 SASGSSSAKFDDKGATTSSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSG 169 + S+ KFD G ++S N F GTI VTVIE LPNGNLVV+GEKQ+ +++G E++R SG Sbjct: 130 TVEAKSNNKFDGSGESSSKNNFKGTITVTVIEALPNGNLVVSGEKQIGINQGQEFIRLSG 189 Query: 170 TVSPDNIQTGNTVSSTLVADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 V+P +I NT+SST VADA+VEYR N +D A M L RFF SV+PF Sbjct: 190 VVNPVHIM-ANTISSTQVADARVEYRANGYLDEAQTMGWLSRFFLSVTPF 238 >ref|YP_003048380.1| flagellar L-ring protein [Methylotenera mobilis JLW8] gb|ACT47853.1| flagellar L-ring protein [Methylotenera mobilis JLW8] Length = 260 Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 103/215 (47%), Positives = 130/215 (60%), Gaps = 13/215 (6%) Query: 18 GCTTVPDSIVEGPKSARPQPASYAPPTSGAIFQGAVYRPLLEDRRARLVGDTLTIVINER 77 GC P SIV P +AR P +G I+ + YRP+ ED R R +GD +TI I E Sbjct: 46 GCAVTPTSIVNQPTTARAPSIGNTPNNNGGIYSASSYRPMFEDHRPRFIGDIVTISITEN 105 Query: 78 TSAGKSAASSASKTGAVNSPAPTFFGTSI-------------KELSASGSSSAKFDDKGA 124 TSA K+ SSASK G+V+ G +I K SAS SS + D A Sbjct: 106 TSATKANGSSASKQGSVSFSTDAKLGDNIPVVGGLVSRLPYAKLGSASASSDNSYTDDAA 165 Query: 125 TTSSNTFTGTIGVTVIEVLPNGNLVVAGEKQVALDKGVEYVRFSGTVSPDNIQTGNTVSS 184 + N F+G+I TV++VLPNG L V+GEKQVALDKG E++RFSG V+PD I GNTV S Sbjct: 166 GNAKNVFSGSITTTVVDVLPNGYLAVSGEKQVALDKGTEFIRFSGVVNPDTITLGNTVPS 225 Query: 185 TLVADAKVEYRTNTRVDMADFMSSLGRFFFSVSPF 219 T VADA++EYRTN+++D A S RFF SVSP+ Sbjct: 226 TKVADARIEYRTNSKIDGAAVASIFARFFLSVSPW 260