BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0046.p (134 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775442.1| flagellar basal-body rod protein [Herbaspiri... 270 5e-71 ref|YP_003523193.1| flagellar basal-body rod protein FlgC [Sider... 205 2e-51 ref|YP_003050553.1| flagellar basal-body rod protein FlgC [Methy... 203 5e-51 ref|YP_003674663.1| flagellar basal-body rod protein FlgC [Methy... 203 6e-51 ref|YP_001100174.1| basal-body rod protein [Herminiimonas arseni... 202 1e-50 ref|YP_546063.1| flagellar basal-body rod protein FlgC [Methylob... 202 1e-50 ref|YP_003048385.1| flagellar basal-body rod protein FlgC [Methy... 198 2e-49 ref|YP_001353109.1| FlgC flagellar basal body rod protein [Janth... 197 4e-49 ref|YP_003846838.1| flagellar basal-body rod protein FlgC [Galli... 197 5e-49 ref|YP_283976.1| flagellar basal-body rod protein FlgC [Dechloro... 193 7e-48 >ref|YP_003775442.1| flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1] gb|ADJ63534.1| Flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1] Length = 134 Score = 270 bits (690), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 134/134 (100%), Positives = 134/134 (100%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS Sbjct: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 Query: 61 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN 120 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN Sbjct: 61 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN 120 Query: 121 TAKAMLVKTLTIGQ 134 TAKAMLVKTLTIGQ Sbjct: 121 TAKAMLVKTLTIGQ 134 >ref|YP_003523193.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus ES-1] gb|ADE10806.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus ES-1] Length = 134 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 98/134 (73%), Positives = 112/134 (83%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSL NIFN+AGSAM+AQSQRLN ASN+AN DSAT PDG PYKAKQVVF +P+ G Sbjct: 1 MSLFNIFNIAGSAMTAQSQRLNVVASNLANVDSATGPDGKPYKAKQVVFSTVPITGQVGE 60 Query: 61 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN 120 GVKVAAVVED +P K VYDPK+P+ADG GYV MPNVNPV+EMVNMISASR+YQ NV+ +N Sbjct: 61 GVKVAAVVEDNSPMKTVYDPKNPLADGQGYVTMPNVNPVDEMVNMISASRSYQNNVDVLN 120 Query: 121 TAKAMLVKTLTIGQ 134 T+K +L KTLTIGQ Sbjct: 121 TSKTLLTKTLTIGQ 134 >ref|YP_003050553.1| flagellar basal-body rod protein FlgC [Methylovorus glucosetrophus SIP3-4] ref|YP_004039223.1| flagellar basal-body rod protein flgc [Methylovorus sp. MP688] gb|ACT50026.1| flagellar basal-body rod protein FlgC [Methylovorus glucosetrophus SIP3-4] gb|ADQ83987.1| flagellar basal-body rod protein FlgC [Methylovorus sp. MP688] Length = 134 Score = 203 bits (517), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 101/134 (75%), Positives = 110/134 (82%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSL N+FNV+GSAMSAQSQRLNA ASN+ANADSATS +G PYKAKQVVF A P S Sbjct: 1 MSLFNVFNVSGSAMSAQSQRLNAVASNLANADSATSANGQPYKAKQVVFSATPTNNAAVS 60 Query: 61 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN 120 GVKV V+ED +PPK+VYDPKHP A+ GYV MPNVN EEMVNMISASRAYQ NVETMN Sbjct: 61 GVKVQQVIEDPSPPKVVYDPKHPAANAQGYVTMPNVNVTEEMVNMISASRAYQNNVETMN 120 Query: 121 TAKAMLVKTLTIGQ 134 AK ML+KTLTIGQ Sbjct: 121 AAKTMLLKTLTIGQ 134 >ref|YP_003674663.1| flagellar basal-body rod protein FlgC [Methylotenera versatilis 301] gb|ADI30086.1| flagellar basal-body rod protein FlgC [Methylotenera versatilis 301] Length = 135 Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 99/134 (73%), Positives = 111/134 (82%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSL N+FN++GSAMSAQ+QRLN ASN+ANADSATS +GTPYKAKQVVF A P G S Sbjct: 1 MSLFNVFNISGSAMSAQAQRLNTVASNLANADSATSANGTPYKAKQVVFSATPTGSPDAS 60 Query: 61 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN 120 GVKV V+ED +P K+VYDPKHP+A+ GYV MPNVN EEMVNMISASRAYQ NVETMN Sbjct: 61 GVKVLKVIEDNSPAKVVYDPKHPLANDKGYVTMPNVNVTEEMVNMISASRAYQNNVETMN 120 Query: 121 TAKAMLVKTLTIGQ 134 AK ML+KTLTIGQ Sbjct: 121 AAKTMLLKTLTIGQ 134 >ref|YP_001100174.1| basal-body rod protein [Herminiimonas arsenicoxydans] emb|CAL62050.1| Flagellar basal-body rod protein FlgC (Putative proximal rod protein) [Herminiimonas arsenicoxydans] Length = 134 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 98/134 (73%), Positives = 112/134 (83%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSL NIFNVAGSAMSAQSQRLN +SNIANA+S TS DG Y+AKQV FQ++P+ G + Sbjct: 1 MSLFNIFNVAGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQSVPMAGATST 60 Query: 61 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN 120 GVKV VVED +P K+V+DPKHP AD G+VAMPNVN VEEMVNMISASR+YQTNVETMN Sbjct: 61 GVKVRQVVEDASPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETMN 120 Query: 121 TAKAMLVKTLTIGQ 134 AK ML+KTLT+GQ Sbjct: 121 AAKTMLLKTLTLGQ 134 >ref|YP_546063.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus KT] gb|ABE50222.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus KT] Length = 135 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 97/135 (71%), Positives = 112/135 (82%), Gaps = 1/135 (0%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSL N+FN++GSAMSAQ QRLN ASN+ANADS TS +G PY+ K +VF A+PV D+ Sbjct: 1 MSLFNVFNISGSAMSAQGQRLNVVASNLANADSVTSSNGQPYRTKHIVFSAVPVNAKGDA 60 Query: 61 -GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETM 119 GVKV +VEDQAPP+L YDPKHP+AD NGYVAMPNVN EEMVNMISASR+YQ NVETM Sbjct: 61 QGVKVQQIVEDQAPPQLKYDPKHPLADANGYVAMPNVNVTEEMVNMISASRSYQNNVETM 120 Query: 120 NTAKAMLVKTLTIGQ 134 N AK+ML+KTLTIGQ Sbjct: 121 NAAKSMLLKTLTIGQ 135 >ref|YP_003048385.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8] gb|ACT47858.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8] Length = 135 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 95/134 (70%), Positives = 112/134 (83%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSL N+FN++GSAMSAQ+QRLN ASN+ANADSATS +GTPYK+KQVVF A+P S Sbjct: 1 MSLFNVFNISGSAMSAQAQRLNTVASNLANADSATSANGTPYKSKQVVFSAMPSKSPDVS 60 Query: 61 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN 120 GVKV VVED++ P+++YDPKHP+A+ GYV+MPNVN EEMVNMISASRAYQ NVETMN Sbjct: 61 GVKVTKVVEDKSAPRMIYDPKHPLANDKGYVSMPNVNVTEEMVNMISASRAYQNNVETMN 120 Query: 121 TAKAMLVKTLTIGQ 134 K ML+KTLTIGQ Sbjct: 121 ATKTMLMKTLTIGQ 134 >ref|YP_001353109.1| FlgC flagellar basal body rod protein [Janthinobacterium sp. Marseille] gb|ABR88931.1| FlgC flagellar basal body rod protein [Janthinobacterium sp. Marseille] Length = 135 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 98/135 (72%), Positives = 112/135 (82%), Gaps = 1/135 (0%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPV-GGVKD 59 MSL NIFNV+GSAMSAQSQRLN +SNIANA+S TS DG Y+AKQV FQA + GG Sbjct: 1 MSLFNIFNVSGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQAQQMKGGATS 60 Query: 60 SGVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETM 119 +GV+V VVED +P K+V+DPKHP AD G+VAMPNVN VEEMVNMISASR+YQTNVETM Sbjct: 61 TGVRVNRVVEDTSPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETM 120 Query: 120 NTAKAMLVKTLTIGQ 134 NTAK ML+KTLT+GQ Sbjct: 121 NTAKTMLLKTLTLGQ 135 >ref|YP_003846838.1| flagellar basal-body rod protein FlgC [Gallionella capsiferriformans ES-2] gb|ADL55074.1| flagellar basal-body rod protein FlgC [Gallionella capsiferriformans ES-2] Length = 134 Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 95/134 (70%), Positives = 108/134 (80%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSL NIFNVAGS M+AQSQRLN ASN+ANADS T DG PY+AKQVVF A P+G Sbjct: 1 MSLFNIFNVAGSGMAAQSQRLNVVASNLANADSTTGADGKPYRAKQVVFSATPMGSTDVQ 60 Query: 61 GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVETMN 120 GVKV V ED +P K+VYDPKHPMAD GYV+MPNVN V+EMVNMISASRAYQ NV+ +N Sbjct: 61 GVKVVRVAEDTSPMKIVYDPKHPMADAKGYVSMPNVNVVDEMVNMISASRAYQNNVDVLN 120 Query: 121 TAKAMLVKTLTIGQ 134 T+K +L+KTLTIGQ Sbjct: 121 TSKTLLLKTLTIGQ 134 >ref|YP_283976.1| flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB] gb|AAZ45506.1| Flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB] Length = 137 Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 94/136 (69%), Positives = 110/136 (80%), Gaps = 2/136 (1%) Query: 1 MSLSNIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTPYKAKQVVFQAIPVGGVKDS 60 MSL N+F V+ SAM+AQS RLN TASN+ANADS S DG PY+AKQVVF+A P+G DS Sbjct: 1 MSLFNVFQVSSSAMTAQSMRLNTTASNLANADSVISADGKPYRAKQVVFEATPMGNAGDS 60 Query: 61 --GVKVAAVVEDQAPPKLVYDPKHPMADGNGYVAMPNVNPVEEMVNMISASRAYQTNVET 118 GV+V +VED +PP+LVYDPK+P AD GYVA PNVN VEEM NMISASR+YQTNVE Sbjct: 61 SKGVRVRQIVEDASPPRLVYDPKNPAADEKGYVAFPNVNVVEEMTNMISASRSYQTNVEV 120 Query: 119 MNTAKAMLVKTLTIGQ 134 MNTAK ML++TL+IGQ Sbjct: 121 MNTAKTMLLRTLSIGQ 136