BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0044.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775440.1| flagellar basal body P-ring formation protei... 507 e-142 ref|YP_001100176.1| basal-body periplasmic P ring assembly prote... 270 1e-70 ref|YP_001353107.1| flagellar basal body P-ring biosynthesis pro... 259 3e-67 ref|ZP_08272751.1| Flagellar basal-body P-ring formation protein... 249 2e-64 ref|YP_003048387.1| flagella basal body P-ring formation protein... 215 5e-54 ref|YP_003050555.1| flagella basal body P-ring formation protein... 214 7e-54 ref|YP_003674661.1| flagella basal body P-ring formation protein... 211 7e-53 ref|YP_412013.1| flageller protein FlgA [Nitrosospira multiformi... 210 2e-52 gb|EGW59763.1| flagella basal body P-ring formation protein FlgA... 202 5e-50 ref|YP_546061.1| flageller protein FlgA [Methylobacillus flagell... 198 8e-49 >ref|YP_003775440.1| flagellar basal body P-ring formation protein [Herbaspirillum seropedicae SmR1] gb|ADJ63532.1| flagellar basal body P-ring formation protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust. Identities = 252/254 (99%), Positives = 252/254 (99%) Query: 1 MSPWDKLLKMKHPLRALRHACAALALLAGGLLALSPASAQNDPTVPQRQDLQIVQQTAEQ 60 MSPWDKLLKMKHPLR LRHACAALALLAGGLLALSPASAQNDPT PQRQDLQIVQQTAEQ Sbjct: 1 MSPWDKLLKMKHPLRVLRHACAALALLAGGLLALSPASAQNDPTAPQRQDLQIVQQTAEQ 60 Query: 61 FLKAQTAGLPGSITIQTDPIDQRMMLPACLDPQAFMPNGARLWGRTSVGVKCVAPAPWTI 120 FLKAQTAGLPGSITIQTDPIDQRMMLPACLDPQAFMPNGARLWGRTSVGVKCVAPAPWTI Sbjct: 61 FLKAQTAGLPGSITIQTDPIDQRMMLPACLDPQAFMPNGARLWGRTSVGVKCVAPAPWTI 120 Query: 121 YVRANVQVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEESQVIGRVAGMSL 180 YVRANVQVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEESQVIGRVAGMSL Sbjct: 121 YVRANVQVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEESQVIGRVAGMSL 180 Query: 181 RAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQMTQARTAAGQVV 240 RAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQMTQARTAAGQVV Sbjct: 181 RAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQMTQARTAAGQVV 240 Query: 241 SGIAKAGGILEINY 254 SGIAKAGGILEINY Sbjct: 241 SGIAKAGGILEINY 254 >ref|YP_001100176.1| basal-body periplasmic P ring assembly protein [Herminiimonas arsenicoxydans] emb|CAL62052.1| Flagella basal body P-ring formation protein FlgA precursor [Herminiimonas arsenicoxydans] Length = 235 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 131/224 (58%), Positives = 170/224 (75%), Gaps = 1/224 (0%) Query: 32 LALSPASAQNDPTVPQ-RQDLQIVQQTAEQFLKAQTAGLPGSITIQTDPIDQRMMLPACL 90 LALS A P+ RQDL +++QTAEQFL+AQ AGLPG + + ID R LPAC+ Sbjct: 12 LALSAQCAVAQGVEPEARQDLGVLKQTAEQFLRAQAAGLPGEVRVTMGSIDPRTKLPACV 71 Query: 91 DPQAFMPNGARLWGRTSVGVKCVAPAPWTIYVRANVQVISDYLIAAVPLAQGQTISASDI 150 P+AF+P ++ WG+TSVG++C AP+ WTIYV+A VQV +Y+ AA PL+QGQTI DI Sbjct: 72 APEAFLPASSKAWGKTSVGLRCSAPSRWTIYVQAKVQVHGEYIAAAAPLSQGQTIGQGDI 131 Query: 151 SRVRGDMSALPAGVITEESQVIGRVAGMSLRAGTPLRMDAIRNQRVVQQGQSVRVVSNGP 210 + ++GD++ LPAGVIT+ SQ IGR A ++ G PLR DA+RNQ+ +QQGQ+VRVV NG Sbjct: 132 ATLKGDLTTLPAGVITDASQAIGRTAATTVALGAPLRQDALRNQQAIQQGQAVRVVVNGA 191 Query: 211 GFQISTEARALSNANEGQMTQARTAAGQVVSGIAKAGGILEINY 254 GF +S+EARAL+NANEGQ+TQ RT AGQV+SGIAK GGI+E+ Y Sbjct: 192 GFSVSSEARALNNANEGQLTQVRTPAGQVISGIAKLGGIVELTY 235 >ref|YP_001353107.1| flagellar basal body P-ring biosynthesis protein [Janthinobacterium sp. Marseille] gb|ABR88398.1| Flagellar basal body P-ring biosynthesis protein [Janthinobacterium sp. Marseille] Length = 234 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 134/246 (54%), Positives = 175/246 (71%), Gaps = 13/246 (5%) Query: 10 MKHPLRALRH-ACAALALLAGGLLALSPASAQNDPTVPQRQDLQIVQQTAEQFLKAQTAG 68 MKH L H A AAL+L L+ A A +P RQDL +++QTAEQFL+ Q G Sbjct: 1 MKH----LFHIAIAALSLST----QLAWAQAAAEP----RQDLAVLKQTAEQFLQMQANG 48 Query: 69 LPGSITIQTDPIDQRMMLPACLDPQAFMPNGARLWGRTSVGVKCVAPAPWTIYVRANVQV 128 LPG + + ID R+ LP C P+AF+P ++ WG+T+VGV+C P WTIYV A V+V Sbjct: 49 LPGEVKVTVGAIDPRLKLPVCPVPEAFLPPSSKAWGKTTVGVRCNVPTVWTIYVSAQVRV 108 Query: 129 ISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEESQVIGRVAGMSLRAGTPLRM 188 +Y+ AA PLAQGQ I DI++V+GD++ LP+GVIT+ SQ IGR A ++ G PLR Sbjct: 109 HGEYIAAAAPLAQGQNIGPGDIAKVKGDLTNLPSGVITDASQAIGRTAATTIALGAPLRQ 168 Query: 189 DAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQMTQARTAAGQVVSGIAKAGG 248 DA+RNQ+ +QQGQ+VRV+ NG GF +S+EARAL+NANEGQ+TQ RTAAGQV+SGIAK GG Sbjct: 169 DALRNQQAIQQGQAVRVILNGDGFSVSSEARALNNANEGQLTQVRTAAGQVISGIAKLGG 228 Query: 249 ILEINY 254 I+E+ Y Sbjct: 229 IVELAY 234 >ref|ZP_08272751.1| Flagellar basal-body P-ring formation protein flgA [Oxalobacteraceae bacterium IMCC9480] gb|EGF33750.1| Flagellar basal-body P-ring formation protein flgA [Oxalobacteraceae bacterium IMCC9480] Length = 245 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 136/250 (54%), Positives = 187/250 (74%), Gaps = 15/250 (6%) Query: 5 DKLLKMKHPLRALRHACAALALLAGGLLALSPASAQNDPTVPQRQDLQIVQQTAEQFLKA 64 + L+ MK L AL AC LL+L PA+AQ + RQD ++ T E+FL+A Sbjct: 11 NTLIAMKTLLVAL--AC---------LLSL-PATAQ---IMAPRQDPATIRTTVERFLRA 55 Query: 65 QTAGLPGSITIQTDPIDQRMMLPACLDPQAFMPNGARLWGRTSVGVKCVAPAPWTIYVRA 124 Q+AG PG +TI +D RM LPAC P+AF+P G+R+WG+TSVGV+C+AP+PWT+YV A Sbjct: 56 QSAGSPGDVTITVGQLDARMNLPACPVPEAFLPAGSRVWGKTSVGVRCLAPSPWTVYVTA 115 Query: 125 NVQVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEESQVIGRVAGMSLRAGT 184 V+VI++Y+ +A PLAQGQ + +D+ R+RGD++ LPAG++T+ +Q IGR MSL G+ Sbjct: 116 QVKVIAEYVASAAPLAQGQLVGPNDVIRMRGDLTVLPAGILTDPAQAIGRTMAMSLGMGS 175 Query: 185 PLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQMTQARTAAGQVVSGIA 244 PLR DA+R Q+VVQQGQ+VR+VS+GPGF ++TE RAL+NA EGQ+ QARTAAGQVVSG+A Sbjct: 176 PLRTDALRIQQVVQQGQAVRLVSSGPGFSVATEGRALNNAAEGQIAQARTAAGQVVSGVA 235 Query: 245 KAGGILEINY 254 +AGG +++ Y Sbjct: 236 RAGGYVDVTY 245 >ref|YP_003048387.1| flagella basal body P-ring formation protein FlgA [Methylotenera mobilis JLW8] gb|ACT47860.1| flagella basal body P-ring formation protein FlgA [Methylotenera mobilis JLW8] Length = 265 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 105/233 (45%), Positives = 156/233 (66%), Gaps = 3/233 (1%) Query: 24 LALLAGGLLALSPASAQN--DPTVPQRQDLQIVQQTAEQFLKAQTAGLPGSITIQTDPID 81 +AL+ G L A++Q + P +QDL + +FL+ QT G PG +T+Q ID Sbjct: 34 IALMLGSAQTLHAATSQAALNKQYP-KQDLSQLSAKVVEFLQTQTVGYPGKVTVQAGAID 92 Query: 82 QRMMLPACLDPQAFMPNGARLWGRTSVGVKCVAPAPWTIYVRANVQVISDYLIAAVPLAQ 141 + L C D Q F+P G+R WG+TSVG++C P+ WTIY +A V V++ YL+AAVPLAQ Sbjct: 93 PNLKLAQCQDAQVFLPTGSRAWGKTSVGIRCNTPSAWTIYAQATVNVVAQYLVAAVPLAQ 152 Query: 142 GQTISASDISRVRGDMSALPAGVITEESQVIGRVAGMSLRAGTPLRMDAIRNQRVVQQGQ 201 G+ ++A D+ GD++ LPAG+ T+ +Q GR+ +S+ AGT LR + ++ VVQQGQ Sbjct: 153 GRVVTADDLLFQSGDLTQLPAGIFTDLAQAQGRIVNISMTAGTVLRQEMLKVSPVVQQGQ 212 Query: 202 SVRVVSNGPGFQISTEARALSNANEGQMTQARTAAGQVVSGIAKAGGILEINY 254 +V V S+G GF++S E +A++ ANEGQ+ Q + A+GQVVSGIA+ GG +E+ + Sbjct: 213 TVMVTSSGKGFRVSAEGKAMTKANEGQVVQVKVASGQVVSGIARQGGQVEVVF 265 >ref|YP_003050555.1| flagella basal body P-ring formation protein FlgA [Methylovorus glucosetrophus SIP3-4] ref|YP_004039225.1| flagella basal body p-ring formation protein flga [Methylovorus sp. MP688] gb|ACT50028.1| flagella basal body P-ring formation protein FlgA [Methylovorus glucosetrophus SIP3-4] gb|ADQ83989.1| flagella basal body P-ring formation protein FlgA [Methylovorus sp. MP688] Length = 242 Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 107/234 (45%), Positives = 153/234 (65%), Gaps = 5/234 (2%) Query: 21 CAALALLAGGLLALSPASAQNDPTVPQRQDLQIVQQTAEQFLKAQTAGLPGSITIQTDPI 80 C + LLAG ALS A A P Q Q+L +++ E+FL QTAG PG +T+ I Sbjct: 14 CTGILLLAGS--ALSHAEAM--PNTDQTQNLTSIRKKVEEFLTVQTAGYPGRVTVTAGAI 69 Query: 81 DQRMMLPACLDPQAFMPNGARLWGRTSVGVKCVAPAPWTIYVRANVQVISDYLIAAVPLA 140 D + L C + FMP G+R WG+T+VGV+C APA WTIY++A V V+ YL+AA PLA Sbjct: 70 DNNLKLAKCPALEVFMPQGSRAWGKTNVGVRCNAPA-WTIYMQATVNVVGQYLVAAAPLA 128 Query: 141 QGQTISASDISRVRGDMSALPAGVITEESQVIGRVAGMSLRAGTPLRMDAIRNQRVVQQG 200 QG+ + + D+ GD++ LP G+ T+ Q IGR+ +S+ AGT LR + ++ VVQQG Sbjct: 129 QGRVVDSGDLLFESGDLAQLPPGIFTDPEQAIGRIVNISMNAGTVLRQEMLKASPVVQQG 188 Query: 201 QSVRVVSNGPGFQISTEARALSNANEGQMTQARTAAGQVVSGIAKAGGILEINY 254 Q+V +++ G GF IS E AL+NA +GQ+ + + A GQVVSGIA+ GG +E+++ Sbjct: 189 QTVTLITRGKGFSISAEGHALNNATDGQLVRVKVANGQVVSGIARNGGKIEVSF 242 >ref|YP_003674661.1| flagella basal body P-ring formation protein FlgA [Methylotenera versatilis 301] gb|ADI30084.1| flagella basal body P-ring formation protein FlgA [Methylotenera versatilis 301] Length = 251 Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 102/220 (46%), Positives = 146/220 (66%), Gaps = 2/220 (0%) Query: 35 SPASAQNDPTVPQRQDLQIVQQTAEQFLKAQTAGLPGSITIQTDPIDQRMMLPACLDPQA 94 +P +A P + +Q+L ++ +FL+ QT G PG +++ ID + L C D Q Sbjct: 34 TPVTAVAPPMI--KQNLASIKTKITEFLETQTIGYPGKVSVHAGAIDPNLKLAQCPDMQV 91 Query: 95 FMPNGARLWGRTSVGVKCVAPAPWTIYVRANVQVISDYLIAAVPLAQGQTISASDISRVR 154 FMP G+R WG+TSVGV+C AP WTIYV+A V VI+ YL+AA PLAQGQT++ D+ Sbjct: 92 FMPTGSRAWGKTSVGVRCNAPNVWTIYVQATVNVIAQYLVAASPLAQGQTVTEQDMMFES 151 Query: 155 GDMSALPAGVITEESQVIGRVAGMSLRAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQI 214 GD++ LPAGV TE+SQ IGR +S+ AG LR + ++ VVQ GQ+V V S G GF + Sbjct: 152 GDLTQLPAGVFTEQSQAIGRTVNISMNAGAVLRQELLKVAPVVQLGQTVMVTSKGNGFSV 211 Query: 215 STEARALSNANEGQMTQARTAAGQVVSGIAKAGGILEINY 254 S E +++ ANEGQ+ Q + A+GQ+V+GIA+ GG +E+ + Sbjct: 212 SAEGLSMAKANEGQVVQVKVASGQIVTGIARNGGQVEVGF 251 >ref|YP_412013.1| flageller protein FlgA [Nitrosospira multiformis ATCC 25196] gb|ABB74621.1| flagellar protein FlgA [Nitrosospira multiformis ATCC 25196] Length = 248 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 102/207 (49%), Positives = 142/207 (68%) Query: 48 RQDLQIVQQTAEQFLKAQTAGLPGSITIQTDPIDQRMMLPACLDPQAFMPNGARLWGRTS 107 RQD VQQ FL+ Q+ GLPG + I + ID R+ LPAC + +P G R WG T+ Sbjct: 42 RQDPHAVQQAVLSFLQMQSIGLPGEVEITSGTIDGRLALPACTALEPSLPPGTRPWGNTT 101 Query: 108 VGVKCVAPAPWTIYVRANVQVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITE 167 V V+C AP WTIYVRA V+V+++YL++ PL QGQ I ASD++ +GD++ LP G++T+ Sbjct: 102 VMVRCTAPHSWTIYVRATVKVVAEYLVSTRPLRQGQVIDASDLTSRKGDLTQLPPGIVTD 161 Query: 168 ESQVIGRVAGMSLRAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEG 227 +Q IGR G +L G+PLR D +R Q V Q Q+V++VS+G GF +S E +AL++A EG Sbjct: 162 WNQAIGRTLGGNLPFGSPLRQDMLRAQTAVIQNQTVKLVSSGRGFSVSAEGKALTHATEG 221 Query: 228 QMTQARTAAGQVVSGIAKAGGILEINY 254 Q R+A+G VVSGIA+AG I+E+ Y Sbjct: 222 QPVTVRSASGAVVSGIARAGAIVEVTY 248 >gb|EGW59763.1| flagella basal body P-ring formation protein FlgA [Dechlorosoma suillum PS] Length = 239 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 98/206 (47%), Positives = 140/206 (67%) Query: 49 QDLQIVQQTAEQFLKAQTAGLPGSITIQTDPIDQRMMLPACLDPQAFMPNGARLWGRTSV 108 Q+ +V +QFL+ QT GLPG + P+D R L AC +AF+P GARLWGR SV Sbjct: 34 QNGDVVINAVDQFLRTQTKGLPGRVQYTITPLDSRTQLAACPAVEAFLPPGARLWGRISV 93 Query: 109 GVKCVAPAPWTIYVRANVQVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITEE 168 GVKC+ A W+IYV V V ++YL+AA PL+ GQ ++ +D+ GD++ LP+GV+T+ Sbjct: 94 GVKCLGDAGWSIYVPVQVSVTANYLVAARPLSPGQPLTLNDVVAQSGDLAGLPSGVVTDV 153 Query: 169 SQVIGRVAGMSLRAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEGQ 228 Q +G+ ++ AG PLR + + VVQQGQ+V+++S G GF +++E RA++NA EGQ Sbjct: 154 QQAVGKTLRNAISAGQPLRAEMLMAPLVVQQGQTVKIMSRGSGFSVTSEGRAMNNAAEGQ 213 Query: 229 MTQARTAAGQVVSGIAKAGGILEINY 254 + QAR A GQ VSGIA+ GGI+EI + Sbjct: 214 IAQARLANGQTVSGIARPGGIIEIGH 239 >ref|YP_546061.1| flageller protein FlgA [Methylobacillus flagellatus KT] gb|ABE50220.1| flagellar protein FlgA [Methylobacillus flagellatus KT] Length = 235 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 97/207 (46%), Positives = 141/207 (68%) Query: 48 RQDLQIVQQTAEQFLKAQTAGLPGSITIQTDPIDQRMMLPACLDPQAFMPNGARLWGRTS 107 QDL ++ EQFL +Q+ GLPG +++ ID R+ L +C Q + G+R+WGRTS Sbjct: 29 HQDLTQLRVQVEQFLLSQSTGLPGKVSVSALAIDPRLKLASCDQLQMSLAAGSRIWGRTS 88 Query: 108 VGVKCVAPAPWTIYVRANVQVISDYLIAAVPLAQGQTISASDISRVRGDMSALPAGVITE 167 VGV+C AP WTIYV+ANVQV+++YL+AA PLAQG I+ D+++ GD++ LP GV T+ Sbjct: 89 VGVRCSAPQVWTIYVQANVQVMAEYLVAAAPLAQGHIITEQDLAKSHGDLAKLPPGVFTD 148 Query: 168 ESQVIGRVAGMSLRAGTPLRMDAIRNQRVVQQGQSVRVVSNGPGFQISTEARALSNANEG 227 SQ IGR + L AGT LR + +R VVQQGQ V + + G GF++S E AL++A +G Sbjct: 149 ASQAIGRAVYVPLSAGTVLRQEMLRVLPVVQQGQKVILNTMGEGFKVSAEGTALTSAGDG 208 Query: 228 QMTQARTAAGQVVSGIAKAGGILEINY 254 Q + + G+VVSG+A+ GG++E+ + Sbjct: 209 QRVKVKVGNGRVVSGLARRGGLIEVIF 235