BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0038.p (705 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775434.1| flagellar biosynthesis FlhA transmembrane pr... 1406 0.0 ref|YP_001353776.1| FlhA flagellar biosynthesis protein [Janthin... 1077 0.0 emb|CAL61484.2| Flagellar biosynthesis protein FlhA [Herminiimon... 1073 0.0 ref|YP_001099611.1| export protein for flagellar biosynthesis [H... 1062 0.0 ref|ZP_08273916.1| Flagellar biosynthesis protein FlhA [Oxalobac... 1050 0.0 ref|YP_003050565.1| flagellar biosynthesis protein FlhA [Methylo... 1033 0.0 ref|YP_004039246.1| flagellar biosynthesis protein flha [Methylo... 1031 0.0 ref|YP_003048701.1| flagellar biosynthesis protein FlhA [Methylo... 1026 0.0 ref|YP_003674652.1| flagellar biosynthesis protein FlhA [Methylo... 1015 0.0 ref|YP_546053.1| flagellar biosynthesis protein FlhA [Methylobac... 1014 0.0 >ref|YP_003775434.1| flagellar biosynthesis FlhA transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63526.1| flagellar biosynthesis FlhA transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 705 Score = 1406 bits (3640), Expect = 0.0, Method: Compositional matrix adjust. Identities = 705/705 (100%), Positives = 705/705 (100%) Query: 1 MATKLNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLM 60 MATKLNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLM Sbjct: 1 MATKLNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLM 60 Query: 61 TALYTVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIG 120 TALYTVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIG Sbjct: 61 TALYTVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIG 120 Query: 121 GNYTVGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPE 180 GNYTVGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPE Sbjct: 121 GNYTVGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPE 180 Query: 181 ARARRKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALK 240 ARARRKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALK Sbjct: 181 ARARRKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALK 240 Query: 241 NYTLLAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIG 300 NYTLLAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIG Sbjct: 241 NYTLLAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIG 300 Query: 301 GMGLIPGMPHIAFILLAAAMGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEE 360 GMGLIPGMPHIAFILLAAAMGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEE Sbjct: 301 GMGLIPGMPHIAFILLAAAMGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEE 360 Query: 361 ATWNDVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNL 420 ATWNDVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNL Sbjct: 361 ATWNDVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNL 420 Query: 421 ELKPSAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLR 480 ELKPSAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLR Sbjct: 421 ELKPSAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLR 480 Query: 481 EQASTMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKM 540 EQASTMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKM Sbjct: 481 EQASTMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKM 540 Query: 541 LPLGSLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMF 600 LPLGSLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMF Sbjct: 541 LPLGSLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMF 600 Query: 601 PGESELPVMALDSKLERLLMQALQASGESGGIEPGLADSLVQHTEIAAQRQEQMGYSPVL 660 PGESELPVMALDSKLERLLMQALQASGESGGIEPGLADSLVQHTEIAAQRQEQMGYSPVL Sbjct: 601 PGESELPVMALDSKLERLLMQALQASGESGGIEPGLADSLVQHTEIAAQRQEQMGYSPVL 660 Query: 661 LVGAPLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQA 705 LVGAPLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQA Sbjct: 661 LVGAPLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQA 705 >ref|YP_001353776.1| FlhA flagellar biosynthesis protein [Janthinobacterium sp. Marseille] gb|ABR88481.1| FlhA flagellar biosynthesis protein [Janthinobacterium sp. Marseille] Length = 694 Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/701 (77%), Positives = 616/701 (87%), Gaps = 9/701 (1%) Query: 5 LNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLMTALY 64 +N++K+PAW+ + +RA+AAP++I+MML+MMVLPLPA +LD+ FSFNI+LS+IVL+TALY Sbjct: 1 MNSLKLPAWMTGQGSRAVAAPLIIIMMLSMMVLPLPAIVLDIFFSFNIALSIIVLLTALY 60 Query: 65 TVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 124 TVKPLDF+ FP VLLVSTMLRLSLNVASTRVVLTEGH GPDAAGKVIEAFGHFLIGGNYT Sbjct: 61 TVKPLDFMVFPTVLLVSTMLRLSLNVASTRVVLTEGHNGPDAAGKVIEAFGHFLIGGNYT 120 Query: 125 VGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPEARAR 184 VGIVVFVILTIINF VVTKGAGRIAEVGARF LDAMPGKQMAIDADLNAGLIGE +AR R Sbjct: 121 VGIVVFVILTIINFTVVTKGAGRIAEVGARFALDAMPGKQMAIDADLNAGLIGEQDARLR 180 Query: 185 RKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALKNYTL 244 R +VAQE+EFYGAMDGASKYVRGDA+AGIIVTV+N+VGGLVVGMVQHD+ F AAL+NYTL Sbjct: 181 RTQVAQEAEFYGAMDGASKYVRGDAIAGIIVTVINVVGGLVVGMVQHDMGFSAALENYTL 240 Query: 245 LAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIGGMGL 304 LAIGDGLVAQIPSLIISTAAG+VVSRVA++QD+GGQL+ QLFA+P+VLYITA IIGGMGL Sbjct: 241 LAIGDGLVAQIPSLIISTAAGIVVSRVASEQDIGGQLVGQLFARPQVLYITAAIIGGMGL 300 Query: 305 IPGMPHIAFILLAAAMGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEEATWN 364 IPGMPH++F+ LA+ M G AY IS+R KA A A E EEATW Sbjct: 301 IPGMPHVSFLFLASLMAGAAYLISQRNLKAPEVEPEVTAPPPA--------PEVEEATWQ 352 Query: 365 DVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNLELKP 424 D++ VDTLGLEVGYRLIPLVDK Q GELL+RIKGIRKKFAQEVGFLSPP+HIRDNLELKP Sbjct: 353 DIVQVDTLGLEVGYRLIPLVDKSQSGELLRRIKGIRKKFAQEVGFLSPPVHIRDNLELKP 412 Query: 425 SAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLREQAS 484 SAYRITLKGVEVG+GEA AGQ+LAINPGMV+G LPG T+DPAFGLPA WID+ +REQA Sbjct: 413 SAYRITLKGVEVGSGEALAGQFLAINPGMVSGTLPGPTTSDPAFGLPATWIDSSMREQAQ 472 Query: 485 TMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKMLPLG 544 MGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQ LLDHL K++PKLVEDLVPK++PL Sbjct: 473 GMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQQLLDHLTKESPKLVEDLVPKLIPLS 532 Query: 545 SLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMFPGES 604 +LQKVLQNLLIEGVHIRDM TIIET+ EHAA IQD +LTA+VR+ALGRAIVQQ+FP + Sbjct: 533 TLQKVLQNLLIEGVHIRDMHTIIETMTEHAAYIQDVNELTALVRVALGRAIVQQLFPSTN 592 Query: 605 ELPVMALDSKLERLLMQALQASGESG-GIEPGLADSLVQHTEIAAQRQEQMGYSPVLLVG 663 EL VM LD++LERLL QALQ SG G GIEPGLAD++ E A ++QE +G +PVLLV Sbjct: 593 ELSVMTLDNRLERLLTQALQGSGPDGAGIEPGLADTIAAQAEAATRQQESLGLTPVLLVP 652 Query: 664 APLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQ 704 A LR LLARFLRRA+PQL+VLSHAEVP+SKTI+VTSLVGGQ Sbjct: 653 AQLRALLARFLRRALPQLKVLSHAEVPDSKTIRVTSLVGGQ 693 >emb|CAL61484.2| Flagellar biosynthesis protein FlhA [Herminiimonas arsenicoxydans] Length = 694 Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/701 (76%), Positives = 612/701 (87%), Gaps = 9/701 (1%) Query: 5 LNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLMTALY 64 +N++K+PAW+ ++A+AAP++I+MML+MM+LPLPA +LD+ FSFNI+LS+IVL+TALY Sbjct: 1 MNSLKMPAWMTGPGSKAVAAPLIIIMMLSMMILPLPAIVLDIFFSFNIALSIIVLLTALY 60 Query: 65 TVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 124 TVKPLDF+ FP VLLVSTMLRLSLNVASTRVVLTEGH GPDAAGKVIEAFGHFLIGGNYT Sbjct: 61 TVKPLDFMVFPTVLLVSTMLRLSLNVASTRVVLTEGHNGPDAAGKVIEAFGHFLIGGNYT 120 Query: 125 VGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPEARAR 184 VG+VVF+ILTIINF VVTKGAGRIAEVGARF LDAMPGKQMAIDADLNAGLIGE +AR R Sbjct: 121 VGLVVFIILTIINFTVVTKGAGRIAEVGARFALDAMPGKQMAIDADLNAGLIGEQDARLR 180 Query: 185 RKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALKNYTL 244 R +VAQE+EFYGAMDGASKYVRGDA+AGIIVTV+N+VGGL+VGMVQHD+AF AAL+NYTL Sbjct: 181 RTQVAQEAEFYGAMDGASKYVRGDAIAGIIVTVINVVGGLIVGMVQHDMAFSAALENYTL 240 Query: 245 LAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIGGMGL 304 LAIGDGLVAQIPSLIISTAAG+VVSRVA++QD+GGQL+ QLFAKP+VLYITA I+GGMGL Sbjct: 241 LAIGDGLVAQIPSLIISTAAGIVVSRVASEQDIGGQLVGQLFAKPQVLYITAAIVGGMGL 300 Query: 305 IPGMPHIAFILLAAAMGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEEATWN 364 IPGMPH++F+ LA + G AY IS+R KA Q A A E EEA+W Sbjct: 301 IPGMPHMSFLFLAGVLAGAAYLISQRALKAP--------QVEPEVTAPPAVPEVEEASWQ 352 Query: 365 DVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNLELKP 424 D++ VDTLGLEVGYRLIPLVDK Q GELL+RIKGIRKKFAQEVGFLSPP+HIRDNLELKP Sbjct: 353 DIVQVDTLGLEVGYRLIPLVDKSQSGELLRRIKGIRKKFAQEVGFLSPPVHIRDNLELKP 412 Query: 425 SAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLREQAS 484 SAYRITLKGVEVG+GEA AGQ+LAINPGMV+G LPG T+DPAFGLPA WID LREQA Sbjct: 413 SAYRITLKGVEVGSGEALAGQFLAINPGMVSGTLPGQATSDPAFGLPATWIDASLREQAQ 472 Query: 485 TMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKMLPLG 544 MGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQ LL+HL K++PKLVEDLVPK++ L Sbjct: 473 GMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQQLLEHLTKESPKLVEDLVPKLISLS 532 Query: 545 SLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMFPGES 604 +LQKVLQNLLIEGVHIRDM +IIETL EHA D +LTA+VRIALGRAIVQQ+FP + Sbjct: 533 TLQKVLQNLLIEGVHIRDMHSIIETLTEHATHTNDVNELTALVRIALGRAIVQQLFPSTN 592 Query: 605 ELPVMALDSKLERLLMQALQASG-ESGGIEPGLADSLVQHTEIAAQRQEQMGYSPVLLVG 663 EL VM LD++LERLL QAL ASG E GIEPGLAD++ E A ++QEQMG +PVLLV Sbjct: 593 ELSVMTLDNRLERLLTQALSASGPEGAGIEPGLADTIAAQAEAATRQQEQMGLTPVLLVP 652 Query: 664 APLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQ 704 A LR LLARFLRRA+PQL+VLSHAEVP+SKTI+VTSLVGGQ Sbjct: 653 AQLRALLARFLRRALPQLKVLSHAEVPDSKTIRVTSLVGGQ 693 >ref|YP_001099611.1| export protein for flagellar biosynthesis [Herminiimonas arsenicoxydans] Length = 665 Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/672 (78%), Positives = 587/672 (87%), Gaps = 9/672 (1%) Query: 34 MMVLPLPAFMLDLLFSFNISLSVIVLMTALYTVKPLDFIAFPAVLLVSTMLRLSLNVAST 93 MM+LPLPA +LD+ FSFNI+LS+IVL+TALYTVKPLDF+ FP VLLVSTMLRLSLNVAST Sbjct: 1 MMILPLPAIVLDIFFSFNIALSIIVLLTALYTVKPLDFMVFPTVLLVSTMLRLSLNVAST 60 Query: 94 RVVLTEGHTGPDAAGKVIEAFGHFLIGGNYTVGIVVFVILTIINFMVVTKGAGRIAEVGA 153 RVVLTEGH GPDAAGKVIEAFGHFLIGGNYTVG+VVF+ILTIINF VVTKGAGRIAEVGA Sbjct: 61 RVVLTEGHNGPDAAGKVIEAFGHFLIGGNYTVGLVVFIILTIINFTVVTKGAGRIAEVGA 120 Query: 154 RFTLDAMPGKQMAIDADLNAGLIGEPEARARRKEVAQESEFYGAMDGASKYVRGDAVAGI 213 RF LDAMPGKQMAIDADLNAGLIGE +AR RR +VAQE+EFYGAMDGASKYVRGDA+AGI Sbjct: 121 RFALDAMPGKQMAIDADLNAGLIGEQDARLRRTQVAQEAEFYGAMDGASKYVRGDAIAGI 180 Query: 214 IVTVVNIVGGLVVGMVQHDLAFDAALKNYTLLAIGDGLVAQIPSLIISTAAGVVVSRVAN 273 IVTV+N+VGGL+VGMVQHD+AF AAL+NYTLLAIGDGLVAQIPSLIISTAAG+VVSRVA+ Sbjct: 181 IVTVINVVGGLIVGMVQHDMAFSAALENYTLLAIGDGLVAQIPSLIISTAAGIVVSRVAS 240 Query: 274 DQDVGGQLINQLFAKPEVLYITAVIIGGMGLIPGMPHIAFILLAAAMGGGAYAISKRVEK 333 +QD+GGQL+ QLFAKP+VLYITA I+GGMGLIPGMPH++F+ LA + G AY IS+R K Sbjct: 241 EQDIGGQLVGQLFAKPQVLYITAAIVGGMGLIPGMPHMSFLFLAGVLAGAAYLISQRALK 300 Query: 334 AKTEAAASQAQAAAGGGAAAAPQESEEATWNDVMPVDTLGLEVGYRLIPLVDKGQGGELL 393 A Q A A E EEA+W D++ VDTLGLEVGYRLIPLVDK Q GELL Sbjct: 301 AP--------QVEPEVTAPPAVPEVEEASWQDIVQVDTLGLEVGYRLIPLVDKSQSGELL 352 Query: 394 KRIKGIRKKFAQEVGFLSPPIHIRDNLELKPSAYRITLKGVEVGNGEAHAGQYLAINPGM 453 +RIKGIRKKFAQEVGFLSPP+HIRDNLELKPSAYRITLKGVEVG+GEA AGQ+LAINPGM Sbjct: 353 RRIKGIRKKFAQEVGFLSPPVHIRDNLELKPSAYRITLKGVEVGSGEALAGQFLAINPGM 412 Query: 454 VTGPLPGMMTTDPAFGLPAVWIDNGLREQASTMGYTVVDAGTVVATHLNHLITTHAAELL 513 V+G LPG T+DPAFGLPA WID LREQA MGYTVVDAGTVVATHLNHLITTHAAELL Sbjct: 413 VSGTLPGQATSDPAFGLPATWIDASLREQAQGMGYTVVDAGTVVATHLNHLITTHAAELL 472 Query: 514 GRQEVQSLLDHLAKDAPKLVEDLVPKMLPLGSLQKVLQNLLIEGVHIRDMRTIIETLAEH 573 GRQEVQ LL+HL K++PKLVEDLVPK++ L +LQKVLQNLLIEGVHIRDM +IIETL EH Sbjct: 473 GRQEVQQLLEHLTKESPKLVEDLVPKLISLSTLQKVLQNLLIEGVHIRDMHSIIETLTEH 532 Query: 574 AARIQDPTDLTAIVRIALGRAIVQQMFPGESELPVMALDSKLERLLMQALQASG-ESGGI 632 A D +LTA+VRIALGRAIVQQ+FP +EL VM LD++LERLL QAL ASG E GI Sbjct: 533 ATHTNDVNELTALVRIALGRAIVQQLFPSTNELSVMTLDNRLERLLTQALSASGPEGAGI 592 Query: 633 EPGLADSLVQHTEIAAQRQEQMGYSPVLLVGAPLRTLLARFLRRAMPQLRVLSHAEVPES 692 EPGLAD++ E A ++QEQMG +PVLLV A LR LLARFLRRA+PQL+VLSHAEVP+S Sbjct: 593 EPGLADTIAAQAEAATRQQEQMGLTPVLLVPAQLRALLARFLRRALPQLKVLSHAEVPDS 652 Query: 693 KTIKVTSLVGGQ 704 KTI+VTSLVGGQ Sbjct: 653 KTIRVTSLVGGQ 664 >ref|ZP_08273916.1| Flagellar biosynthesis protein FlhA [Oxalobacteraceae bacterium IMCC9480] gb|EGF32617.1| Flagellar biosynthesis protein FlhA [Oxalobacteraceae bacterium IMCC9480] Length = 694 Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 551/702 (78%), Positives = 619/702 (88%), Gaps = 9/702 (1%) Query: 5 LNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLMTALY 64 +N++K+P W+ N++A+AAP++I+MML+MM+LPLPAF+LD+ FSFNI+LS+IVL+TALY Sbjct: 1 MNSLKLPLWMSGPNSKAIAAPVIIIMMLSMMILPLPAFVLDIFFSFNIALSIIVLLTALY 60 Query: 65 TVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 124 TV+PLDF+AFP VLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT Sbjct: 61 TVRPLDFMAFPTVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 120 Query: 125 VGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPEARAR 184 VGIVVF+ILTIINF VVTKGAGRIAEVGARF LDAMPGKQMAIDADLNAGLI EPEA+ R Sbjct: 121 VGIVVFIILTIINFTVVTKGAGRIAEVGARFALDAMPGKQMAIDADLNAGLIAEPEAKRR 180 Query: 185 RKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALKNYTL 244 R EVAQE+EFYGAMDGASKYVRGDAVAGIIVTV+NI+GGL+VG++QHD+ F AALKNYTL Sbjct: 181 RTEVAQEAEFYGAMDGASKYVRGDAVAGIIVTVINIIGGLLVGLLQHDMGFAAALKNYTL 240 Query: 245 LAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIGGMGL 304 LAIGDGLVAQIPSLIISTAAGVVVSRVA+D D+G QL+NQLFAKP+VLYIT IIGGMGL Sbjct: 241 LAIGDGLVAQIPSLIISTAAGVVVSRVASDVDIGSQLVNQLFAKPQVLYITGGIIGGMGL 300 Query: 305 IPGMPHIAFILLAAAMGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEEATWN 364 IPGMPH+AFILL A + +A SKR A A AA ESEEATW Sbjct: 301 IPGMPHVAFILLGALLAAAGHAASKRNAAPVEAVAEPVAAAAP--------VESEEATWQ 352 Query: 365 DVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNLELKP 424 D++PVD LGLEVGYRLIPLVDK Q GELLKRIKGIRKKFAQEVGFLSPP+HIRDNLELKP Sbjct: 353 DIVPVDMLGLEVGYRLIPLVDKTQSGELLKRIKGIRKKFAQEVGFLSPPVHIRDNLELKP 412 Query: 425 SAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLREQAS 484 S+YRITLKGVEVG GEAH GQ+LAINPGMVTG L G TTDPAFGLPAVWID +REQA Sbjct: 413 SSYRITLKGVEVGTGEAHTGQFLAINPGMVTGTLAGAPTTDPAFGLPAVWIDAAMREQAQ 472 Query: 485 TMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKMLPLG 544 TMGYTVVDAGTVVATHLNHLIT+HAAELLGRQEVQ LLDHLAK+ PKLVEDLVPKM+ + Sbjct: 473 TMGYTVVDAGTVVATHLNHLITSHAAELLGRQEVQQLLDHLAKEMPKLVEDLVPKMVSIS 532 Query: 545 SLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMFPGES 604 +LQKVLQNLL EGVHIRDMRTIIE LAE ++++Q+ +LTA+VRIALGRAIVQ +FPG + Sbjct: 533 TLQKVLQNLLNEGVHIRDMRTIIECLAEQSSQVQEANELTALVRIALGRAIVQDIFPGTN 592 Query: 605 ELPVMALDSKLERLLMQALQASGESG-GIEPGLADSLVQHTEIAAQRQEQMGYSPVLLVG 663 EL VMALD++LERLLMQALQASG G GIEPGLAD+L T+ AAQ QEQ+G +PVLLV Sbjct: 593 ELSVMALDNRLERLLMQALQASGPDGAGIEPGLADTLQYQTQQAAQHQEQLGLTPVLLVP 652 Query: 664 APLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQA 705 APLR LL+RFLRRA+PQL+VLSHAE+P++KTIKVTSLVG QA Sbjct: 653 APLRALLSRFLRRALPQLKVLSHAELPDTKTIKVTSLVGAQA 694 >ref|YP_003050565.1| flagellar biosynthesis protein FlhA [Methylovorus glucosetrophus SIP3-4] gb|ACT50038.1| flagellar biosynthesis protein FlhA [Methylovorus glucosetrophus SIP3-4] Length = 693 Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 512/687 (74%), Positives = 591/687 (86%), Gaps = 10/687 (1%) Query: 20 RAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLMTALYTVKPLDFIAFPAVLL 79 R +AAP+LIVM+LAMM+LPLPA LD+LFSFNI+LS++VLM L T KPLDFIAFP VLL Sbjct: 16 RTIAAPLLIVMLLAMMILPLPAIALDVLFSFNIALSIMVLMIGLQTSKPLDFIAFPTVLL 75 Query: 80 VSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYTVGIVVFVILTIINFM 139 VSTMLRLSLNVASTRVVLTEGH GPDAAGKVIEAFGHFLIGGNYTVGIVVFVILTIINF Sbjct: 76 VSTMLRLSLNVASTRVVLTEGHAGPDAAGKVIEAFGHFLIGGNYTVGIVVFVILTIINFT 135 Query: 140 VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPEARARRKEVAQESEFYGAMD 199 VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGE EAR RR E+ QE+EFYGAMD Sbjct: 136 VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEDEARRRRSEIGQEAEFYGAMD 195 Query: 200 GASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALKNYTLLAIGDGLVAQIPSLI 259 GASKYVRGDAVAGI+VTV+NIVGGL+VGMVQHD+AF A+KNYTLLAIGDGLVAQIPSL+ Sbjct: 196 GASKYVRGDAVAGILVTVINIVGGLIVGMVQHDMAFADAIKNYTLLAIGDGLVAQIPSLV 255 Query: 260 ISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIGGMGLIPGMPHIAFILLAAA 319 IS AAGVVVSRVAN +DVG QL+ QLF+ P+V+Y+TA IIG MG IPGMPH AF+ L A Sbjct: 256 ISVAAGVVVSRVANTEDVGTQLVTQLFSNPKVIYVTAAIIGSMGAIPGMPHFAFLTLGAL 315 Query: 320 MGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEEATWNDVMPVDTLGLEVGYR 379 + G AY ++ EK KT A G E EEA+WNDV+PVD +GLEVGYR Sbjct: 316 LAGLAYFVA---EKKKTAEDPVVAPPPVPTG------EPEEASWNDVLPVDVIGLEVGYR 366 Query: 380 LIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNLELKPSAYRITLKGVEVGNG 439 LIPLVDK QGG+LLKRIKG+RKKFAQEVGFL+P +HIRDNLEL+PS YRITLKGVEVG+G Sbjct: 367 LIPLVDKAQGGDLLKRIKGLRKKFAQEVGFLAPTVHIRDNLELRPSGYRITLKGVEVGSG 426 Query: 440 EAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLREQASTMGYTVVDAGTVVAT 499 E++ GQ+LAINPGMV+G LPG TTDPAFGLPA+W+++ +R+QA MGYTVVDA TVVAT Sbjct: 427 ESNHGQFLAINPGMVSGTLPGTATTDPAFGLPAIWVESAVRDQAQAMGYTVVDASTVVAT 486 Query: 500 HLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKMLPLGSLQKVLQNLLIEGVH 559 HLNH+ITT+AA+LLGRQEVQ LLDH+ KD+PKLVEDLVPK LPL +QKVLQNLL EGVH Sbjct: 487 HLNHIITTNAADLLGRQEVQQLLDHIGKDSPKLVEDLVPKQLPLSVVQKVLQNLLSEGVH 546 Query: 560 IRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMFPGESELPVMALDSKLERLL 619 IRDMRTI+ETL+E+A+R QDP++LT VR+ LGRAIVQQ+FP +E+ VMALD++LERLL Sbjct: 547 IRDMRTIVETLSEYASRTQDPSELTTFVRVQLGRAIVQQLFPNGNEVSVMALDNQLERLL 606 Query: 620 MQALQASGESG-GIEPGLADSLVQHTEIAAQRQEQMGYSPVLLVGAPLRTLLARFLRRAM 678 MQAL +S G IEPGLA++L + E A ++QEQ+G +PVLLV PLR+ L++FLRRA+ Sbjct: 607 MQALSSSNAGGAAIEPGLAETLSKQAEAATRKQEQLGMTPVLLVPGPLRSALSKFLRRAI 666 Query: 679 PQLRVLSHAEVPESKTIKVTSLVGGQA 705 P LRVLSH E+P+SKTI+VTSL+GGQA Sbjct: 667 PHLRVLSHEELPDSKTIRVTSLIGGQA 693 >ref|YP_004039246.1| flagellar biosynthesis protein flha [Methylovorus sp. MP688] gb|ADQ84010.1| flagellar biosynthesis protein FlhA [Methylovorus sp. MP688] Length = 693 Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/687 (73%), Positives = 593/687 (86%), Gaps = 10/687 (1%) Query: 20 RAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLMTALYTVKPLDFIAFPAVLL 79 R +AAP+LIVM+LAMM+LPLPA LD+LFSFNI+LS++VLM L T KPLDFIAFP VLL Sbjct: 16 RTIAAPLLIVMLLAMMILPLPAIALDVLFSFNIALSIMVLMIGLQTSKPLDFIAFPTVLL 75 Query: 80 VSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYTVGIVVFVILTIINFM 139 VSTMLRLSLNVASTRVVLTEGH GPDAAGKVIEAFGHFLIGGNYTVGIVVFVILTIINF Sbjct: 76 VSTMLRLSLNVASTRVVLTEGHAGPDAAGKVIEAFGHFLIGGNYTVGIVVFVILTIINFT 135 Query: 140 VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPEARARRKEVAQESEFYGAMD 199 VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGE EAR RR E+ QE+EFYGAMD Sbjct: 136 VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEDEARRRRSEIGQEAEFYGAMD 195 Query: 200 GASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALKNYTLLAIGDGLVAQIPSLI 259 GASKYVRGDAVAGI+VTV+NIVGGL+VGMVQHD+AF A+KNYTLLAIGDGLVAQIPSL+ Sbjct: 196 GASKYVRGDAVAGILVTVINIVGGLIVGMVQHDMAFADAIKNYTLLAIGDGLVAQIPSLV 255 Query: 260 ISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIGGMGLIPGMPHIAFILLAAA 319 IS AAGVVVSRVAN +DVG QL+ QLF+ P+V+Y+TA IIG MG IPGMPH AF+ L A Sbjct: 256 ISVAAGVVVSRVANTEDVGTQLVTQLFSNPKVIYVTAAIIGSMGAIPGMPHFAFLTLGAL 315 Query: 320 MGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEEATWNDVMPVDTLGLEVGYR 379 + G AY ++++ +K+ + + G E EEA+WNDV+PVD +GLEVGYR Sbjct: 316 LAGLAYFVAEK-KKSAEDPVVAPPPVPTG--------EPEEASWNDVLPVDVIGLEVGYR 366 Query: 380 LIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNLELKPSAYRITLKGVEVGNG 439 LIPLVDK QGG+LLKRIKG+RKKFAQEVGFL+P +HIRDNLEL+PS YRITLKGVEVG+G Sbjct: 367 LIPLVDKAQGGDLLKRIKGLRKKFAQEVGFLAPTVHIRDNLELRPSGYRITLKGVEVGSG 426 Query: 440 EAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLREQASTMGYTVVDAGTVVAT 499 E++ GQ+LAINPGMV+G LPG TTDPAFGLPA+W+++ +R+QA MGYTVVDA TVVAT Sbjct: 427 ESNHGQFLAINPGMVSGTLPGTATTDPAFGLPAIWVESAVRDQAQAMGYTVVDASTVVAT 486 Query: 500 HLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKMLPLGSLQKVLQNLLIEGVH 559 HLNH+ITT+AA+LLGRQEVQ LLDH+ KD+PKLVEDLVPK LPL +QKVLQNLL EGVH Sbjct: 487 HLNHIITTNAADLLGRQEVQQLLDHIGKDSPKLVEDLVPKQLPLSVVQKVLQNLLSEGVH 546 Query: 560 IRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMFPGESELPVMALDSKLERLL 619 IRDMRTI+ETL+E+A+R QDP++LT VR+ LGRAIVQQ+FP +E+ VMALD++LERLL Sbjct: 547 IRDMRTIVETLSEYASRTQDPSELTTFVRVQLGRAIVQQLFPTGNEVSVMALDNQLERLL 606 Query: 620 MQALQASGESG-GIEPGLADSLVQHTEIAAQRQEQMGYSPVLLVGAPLRTLLARFLRRAM 678 MQAL +S G IEPGLA++L + E A ++QEQ+G +PVLLV PLR+ L++FLRRA+ Sbjct: 607 MQALSSSNAGGAAIEPGLAETLSKQAEAATRKQEQLGMTPVLLVPGPLRSALSKFLRRAI 666 Query: 679 PQLRVLSHAEVPESKTIKVTSLVGGQA 705 P LRVLSH E+P+SKTI+VTSL+GGQA Sbjct: 667 PHLRVLSHEELPDSKTIRVTSLIGGQA 693 >ref|YP_003048701.1| flagellar biosynthesis protein FlhA [Methylotenera mobilis JLW8] gb|ACT48174.1| flagellar biosynthesis protein FlhA [Methylotenera mobilis JLW8] Length = 693 Score = 1026 bits (2653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/701 (72%), Positives = 603/701 (86%), Gaps = 8/701 (1%) Query: 5 LNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLMTALY 64 +N + +PAW+ +R++AAP++IV++L+MM+LPLPA LD+LFSFNI+LS++VL+ L Sbjct: 1 MNPINLPAWMTNLGSRSVAAPLIIVLLLSMMILPLPAIALDVLFSFNIALSIMVLLIGLQ 60 Query: 65 TVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 124 T K LDFIAFP VLLV+TMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT Sbjct: 61 TKKALDFIAFPTVLLVTTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 120 Query: 125 VGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPEARAR 184 VGIVVFVILTIINF VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGE EAR R Sbjct: 121 VGIVVFVILTIINFTVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEDEARKR 180 Query: 185 RKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALKNYTL 244 R E++QESEFYGAMDGASKYVRGDAVAGI+VT++NIVGGL VGM+QH LAFD A+K YTL Sbjct: 181 RAEISQESEFYGAMDGASKYVRGDAVAGILVTIINIVGGLFVGMIQHGLAFDDAVKIYTL 240 Query: 245 LAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIGGMGL 304 LAIGDGLVAQIPSL+IS AAGVVVSRVAN++D+GGQL QLF+ P V+Y+TA I+GGMG+ Sbjct: 241 LAIGDGLVAQIPSLVISVAAGVVVSRVANNEDIGGQLTTQLFSNPRVIYVTAAIVGGMGV 300 Query: 305 IPGMPHIAFILLAAAMGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEEATWN 364 IPGMP++AF+ LAA + G AY + +R + E + AP E EEA+W+ Sbjct: 301 IPGMPNVAFLTLAALLAGIAYLVDERQKITDAEPQIEEV--------PPAPLEVEEASWD 352 Query: 365 DVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNLELKP 424 DV PVDT+GLEVGYRLIPLVDK QGG+LLKRIKG+RKKFA E+GFL+P +HIRDNLELKP Sbjct: 353 DVTPVDTVGLEVGYRLIPLVDKLQGGDLLKRIKGLRKKFANEIGFLAPTVHIRDNLELKP 412 Query: 425 SAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLREQAS 484 S YRITLKGVE+ GE++ GQYLAI+PGMVTGPL G +TTDPAFGLPAVWID GLR++A Sbjct: 413 SGYRITLKGVEIATGESNYGQYLAIDPGMVTGPLAGQITTDPAFGLPAVWIDAGLRDEAQ 472 Query: 485 TMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKMLPLG 544 +MGYTVVDAGTV+ATH+NH+I+ HAAELLGRQEVQ LLDH++K++PKL+EDLVPK++PL Sbjct: 473 SMGYTVVDAGTVIATHINHIISMHAAELLGRQEVQQLLDHISKESPKLIEDLVPKLMPLS 532 Query: 545 SLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMFPGES 604 +QKVLQNLL EGVHIRDMRTIIETL+EHA++ QD DLTA+VR+ LGRAIVQQ+FP + Sbjct: 533 VVQKVLQNLLTEGVHIRDMRTIIETLSEHASQTQDTNDLTALVRVQLGRAIVQQLFPTGN 592 Query: 605 ELPVMALDSKLERLLMQALQASGESGGIEPGLADSLVQHTEIAAQRQEQMGYSPVLLVGA 664 E+ VM+LD+ LERLL+QA+Q + +EPG+A++L + E AA++QEQMG +PVLLV A Sbjct: 593 EVTVMSLDNNLERLLLQAMQNNTGGSAMEPGMAETLSRQAEEAARQQEQMGLTPVLLVSA 652 Query: 665 PLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQA 705 PLR LA+FLRRA+P LRVLSH E+P+SKTI+VTSL+GG A Sbjct: 653 PLRAALAKFLRRAVPNLRVLSHEELPDSKTIRVTSLIGGSA 693 >ref|YP_003674652.1| flagellar biosynthesis protein FlhA [Methylotenera versatilis 301] gb|ADI30075.1| flagellar biosynthesis protein FlhA [Methylotenera versatilis 301] Length = 694 Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/702 (71%), Positives = 598/702 (85%), Gaps = 9/702 (1%) Query: 5 LNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLMTALY 64 +N + +P W+ +R +AAP +I+++LAMM+LPLPA +LD+LFSFNI++SV+VL+ L Sbjct: 1 MNGLNLPPWMNKLASRNIAAPAIIILLLAMMILPLPAVILDVLFSFNIAISVMVLLIGLQ 60 Query: 65 TVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 124 T K LDFIAFP VLL++TMLRLSLNVASTRVVL EGH GPDAAGKVIEAFGHFLIGGNYT Sbjct: 61 TKKALDFIAFPTVLLMTTMLRLSLNVASTRVVLAEGHNGPDAAGKVIEAFGHFLIGGNYT 120 Query: 125 VGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPEARAR 184 VGIVVFVILTIINF VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGE EAR R Sbjct: 121 VGIVVFVILTIINFTVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEDEARRR 180 Query: 185 RKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALKNYTL 244 R EV QESEFYGAMDGASKYVRGDAVAGI+V ++NIVGGLVVG+VQHDLAF A+KNYT+ Sbjct: 181 RAEVGQESEFYGAMDGASKYVRGDAVAGIMVIIINIVGGLVVGIVQHDLAFADAVKNYTM 240 Query: 245 LAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIGGMGL 304 LAIGDGLVAQIPSLIIS AAGVVVSRVAN++D+GGQL+ QLF+ +V+Y+TA IIGGMG Sbjct: 241 LAIGDGLVAQIPSLIISVAAGVVVSRVANNEDIGGQLVTQLFSNSKVVYVTAGIIGGMGA 300 Query: 305 IPGMPHIAFILLAAAMGGGAYAISKRVEKAKTEAAASQAQAAAGGGAAAAPQESEEATWN 364 IPGMPH AF+LLAA + G AY I+ E+ K E A + + EEATW+ Sbjct: 301 IPGMPHFAFLLLAAILAGVAYFIA---EQKKVEDAEPVVEEKVEVVSTL-----EEATWD 352 Query: 365 DVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNLELKP 424 DV PVD +GLEVGYRLIPLVDK QGG+LLKRIKG+RKKFAQEVGFL+P +HIRDNLELKP Sbjct: 353 DVTPVDLIGLEVGYRLIPLVDKAQGGDLLKRIKGLRKKFAQEVGFLAPTVHIRDNLELKP 412 Query: 425 SAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLREQAS 484 S+Y+ITLKGVE+ +GE++ Q+LAI+PGMV+GPLPG MTTDPAFGLPAVWID+ ++++A Sbjct: 413 SSYKITLKGVEIASGESNYAQFLAIDPGMVSGPLPGTMTTDPAFGLPAVWIDSNIKDEAQ 472 Query: 485 TMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKMLPLG 544 MGYTVVDAGTV+ATHLNH+I+ HAAELLGRQEVQ LLDH++KD+PKLVEDL PK+L L Sbjct: 473 NMGYTVVDAGTVIATHLNHIISLHAAELLGRQEVQQLLDHISKDSPKLVEDLTPKLLSLS 532 Query: 545 SLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMFPGES 604 +QKVLQNLL EGVHIRDMRTI+ETL+E+A + QD +LTA+VR+ LGRAIVQQ+FP + Sbjct: 533 VIQKVLQNLLSEGVHIRDMRTIVETLSEYATQTQDTGELTAVVRVQLGRAIVQQLFPTGN 592 Query: 605 ELPVMALDSKLERLLMQALQASGESGG-IEPGLADSLVQHTEIAAQRQEQMGYSPVLLVG 663 E+ VM LDS LERLL QA+Q +G +G IEPG+A++L + E AA++QEQMG +PVLLV Sbjct: 593 EVTVMTLDSNLERLLTQAMQGNGTAGSAIEPGMAETLSRQAETAAKQQEQMGMTPVLLVS 652 Query: 664 APLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQA 705 APLR L++FLRRA+P LRVLSH E+P+SKTI+VTSL+GG A Sbjct: 653 APLRAALSKFLRRAVPHLRVLSHDELPDSKTIRVTSLIGGSA 694 >ref|YP_546053.1| flagellar biosynthesis protein FlhA [Methylobacillus flagellatus KT] gb|ABE50212.1| flagellar biosynthesis protein FlhA [Methylobacillus flagellatus KT] Length = 690 Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/704 (72%), Positives = 592/704 (84%), Gaps = 17/704 (2%) Query: 5 LNTMKIPAWVPVKNARAMAAPILIVMMLAMMVLPLPAFMLDLLFSFNISLSVIVLMTALY 64 +N K+P+W+ +MAAPI+I+M+LAMM+LPLPA LD LFSFNI+LS++VL+ L Sbjct: 1 MNAFKLPSWL--NGGSSMAAPIIIIMLLAMMILPLPAIALDALFSFNIALSILVLLVGLQ 58 Query: 65 TVKPLDFIAFPAVLLVSTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 124 T KPLDFIAFP VLLV+TMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT Sbjct: 59 TSKPLDFIAFPTVLLVTTMLRLSLNVASTRVVLTEGHTGPDAAGKVIEAFGHFLIGGNYT 118 Query: 125 VGIVVFVILTIINFMVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEPEARAR 184 VGIVVFVILTIINF+VVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGE EAR+R Sbjct: 119 VGIVVFVILTIINFVVVTKGAGRIAEVGARFTLDAMPGKQMAIDADLNAGLIGEEEARSR 178 Query: 185 RKEVAQESEFYGAMDGASKYVRGDAVAGIIVTVVNIVGGLVVGMVQHDLAFDAALKNYTL 244 RKE+ QE+EFYGAMDGASKYVRGDAVAGI+V V+NI+GGL+VGMVQHDL+F A+KNYTL Sbjct: 179 RKEIGQEAEFYGAMDGASKYVRGDAVAGILVIVINILGGLIVGMVQHDLSFADAVKNYTL 238 Query: 245 LAIGDGLVAQIPSLIISTAAGVVVSRVANDQDVGGQLINQLFAKPEVLYITAVIIGGMGL 304 LAIGDGLVAQIP+LIIS AAGVVVSRVA+D+++ QL QL + P +YITA II G+GL Sbjct: 239 LAIGDGLVAQIPALIISVAAGVVVSRVADDRNISNQLTEQLLSNPRAIYITAAIIAGLGL 298 Query: 305 IPGMPHIAFILLAAAMGGGAYAISKR--VEKAKTEAAASQAQAAAGGGAAAAPQESEEAT 362 IPGMPH AF++LA + G A+ K+ V++A+ E A ++ +S EA+ Sbjct: 299 IPGMPHFAFLVLAGLLAGVAFTAEKKQQVKEAEPETAPAEV------------NDSPEAS 346 Query: 363 WNDVMPVDTLGLEVGYRLIPLVDKGQGGELLKRIKGIRKKFAQEVGFLSPPIHIRDNLEL 422 W+DVMPVD +GLEVGYRLIPLVD QGG+LLKRIKG+RKKFAQEVGFL PPIHIRDNLEL Sbjct: 347 WDDVMPVDVIGLEVGYRLIPLVDVAQGGDLLKRIKGLRKKFAQEVGFLPPPIHIRDNLEL 406 Query: 423 KPSAYRITLKGVEVGNGEAHAGQYLAINPGMVTGPLPGMMTTDPAFGLPAVWIDNGLREQ 482 +P+ YRITLKGVEVG+GE+ GQYLAI+PG VTGPL G TTDPAFGLPAVWI+ R+Q Sbjct: 407 RPAGYRITLKGVEVGSGESFPGQYLAIDPGNVTGPLSGTTTTDPAFGLPAVWIEANTRDQ 466 Query: 483 ASTMGYTVVDAGTVVATHLNHLITTHAAELLGRQEVQSLLDHLAKDAPKLVEDLVPKMLP 542 A MGYTVVD TV+ATHLNH+IT+HAAELLGRQEVQ LLDH+ K++PKLVEDLVPK L Sbjct: 467 AQAMGYTVVDTSTVIATHLNHMITSHAAELLGRQEVQQLLDHIGKESPKLVEDLVPKALS 526 Query: 543 LGSLQKVLQNLLIEGVHIRDMRTIIETLAEHAARIQDPTDLTAIVRIALGRAIVQQMFPG 602 L S+QKVLQNLL+EGVHIRDMRTIIETL+EH R QD +LT++VRI LGRAIVQQ+FP Sbjct: 527 LSSVQKVLQNLLMEGVHIRDMRTIIETLSEHGPRTQDTDELTSLVRIQLGRAIVQQLFPT 586 Query: 603 ESELPVMALDSKLERLLMQALQASGESG-GIEPGLADSLVQHTEIAAQRQEQMGYSPVLL 661 +E+PVM LD LERLLMQALQAS G IEPGLA++L AA++QEQMG +PVLL Sbjct: 587 GNEVPVMTLDHNLERLLMQALQASANGGAAIEPGLAETLSTQAANAAKQQEQMGLAPVLL 646 Query: 662 VGAPLRTLLARFLRRAMPQLRVLSHAEVPESKTIKVTSLVGGQA 705 V LRT L+RFLRRA P+LRVLSH E+P++KTI+VTSL+GGQA Sbjct: 647 VPGSLRTALSRFLRRAAPRLRVLSHEELPDTKTIRVTSLIGGQA 690