BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0016.0027.p         (74 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004156760.1| hypothetical protein Varpa_4481 [Variovorax ...    80   2e-13
ref|YP_002945757.1| hypothetical protein Vapar_3877 [Variovorax ...    79   3e-13
ref|YP_001565228.1| hypothetical protein Daci_4212 [Delftia acid...    69   2e-10
ref|YP_004488016.1| hypothetical protein DelCs14_2649 [Delftia s...    67   7e-10

>ref|YP_004156760.1| hypothetical protein Varpa_4481 [Variovorax paradoxus EPS]
 gb|ADU38649.1| hypothetical protein Varpa_4481 [Variovorax paradoxus EPS]
          Length = 74

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 42/57 (73%), Gaps = 2/57 (3%)

Query: 18 GCVVTPPAVHPAYVAPPGVVYVEPTYASPGPGWVWEYHSYYGWGWHHPHYGWHRGWR 74
          GCVV P    P Y APPGV Y+ PTY SPG G+VW YH  YGWGWHHP YGWHRGWR
Sbjct: 20 GCVVAP--AQPVYSAPPGVAYMAPTYVSPGVGFVWAYHPRYGWGWHHPQYGWHRGWR 74


>ref|YP_002945757.1| hypothetical protein Vapar_3877 [Variovorax paradoxus S110]
 gb|ACS20491.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 73

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 42/57 (73%), Gaps = 2/57 (3%)

Query: 18 GCVVTPPAVHPAYVAPPGVVYVEPTYASPGPGWVWEYHSYYGWGWHHPHYGWHRGWR 74
          GCVV P    P Y APPGV YV PTY SPG G+VW YH  YG+GWHHP YGWHRGWR
Sbjct: 19 GCVVAP--AQPVYTAPPGVAYVAPTYVSPGVGFVWSYHPRYGYGWHHPRYGWHRGWR 73


>ref|YP_001565228.1| hypothetical protein Daci_4212 [Delftia acidovorans SPH-1]
 gb|ABX36843.1| hypothetical protein Daci_4212 [Delftia acidovorans SPH-1]
          Length = 87

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/45 (73%), Positives = 35/45 (77%)

Query: 30 YVAPPGVVYVEPTYASPGPGWVWEYHSYYGWGWHHPHYGWHRGWR 74
          YV PPGV YV P Y  PG G+VW+YH  YGWGWHHP YGWHRGWR
Sbjct: 43 YVVPPGVAYVAPAYPMPGVGFVWQYHPRYGWGWHHPVYGWHRGWR 87


>ref|YP_004488016.1| hypothetical protein DelCs14_2649 [Delftia sp. Cs1-4]
 gb|AEF89661.1| hypothetical protein DelCs14_2649 [Delftia sp. Cs1-4]
          Length = 87

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/45 (71%), Positives = 34/45 (75%)

Query: 30 YVAPPGVVYVEPTYASPGPGWVWEYHSYYGWGWHHPHYGWHRGWR 74
          YV PPGV YV P Y  P  G+VW+YH  YGWGWHHP YGWHRGWR
Sbjct: 43 YVVPPGVAYVAPAYPMPSVGFVWQYHPRYGWGWHHPVYGWHRGWR 87