BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0007.p (543 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777067.1| DNA polymerase III subunit gamma/tau [Herbas... 825 0.0 ref|YP_004753462.1| DNA polymerase III subunits gamma and tau [C... 701 0.0 ref|YP_001099352.1| DNA polymerase III subunit tau/gamma [Hermin... 687 0.0 ref|YP_001354020.1| DNA polymerase III gamma and tau subunit [Ja... 678 0.0 ref|YP_584277.1| DNA polymerase III subunits gamma and tau [Cupr... 626 e-177 ref|YP_296320.2| DNA polymerase III subunits gamma and tau [Rals... 619 e-175 gb|AAZ61476.1| DNA polymerase III, gamma subunit / DNA polymeras... 619 e-175 ref|YP_004686114.1| DNA polymerase III subunit tau [Cupriavidus ... 615 e-174 ref|NP_519312.1| DNA polymerase III subunits gamma and tau [Rals... 615 e-174 ref|YP_726852.1| DNA polymerase III subunits gamma and tau [Rals... 614 e-173 >ref|YP_003777067.1| DNA polymerase III subunit gamma/tau [Herbaspirillum seropedicae SmR1] gb|ADJ65159.1| DNA polymerase III (subunits tau and gamma) protein [Herbaspirillum seropedicae SmR1] Length = 712 Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/467 (99%), Positives = 464/467 (99%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNCVGPDG GGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP Sbjct: 61 SLNCVGPDGAGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE Sbjct: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA Sbjct: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM Sbjct: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Query: 361 LAFRPVSASATAPIPAASSAPAAAGGRPTAPRQAAPLMAPQVAVTSAPVSRTQAATAPAP 420 LAFRPVSASATAPIPAASSAPAAAGGRPTAPRQAAPLMAPQVAVTSAPVSRTQAATAPAP Sbjct: 361 LAFRPVSASATAPIPAASSAPAAAGGRPTAPRQAAPLMAPQVAVTSAPVSRTQAATAPAP 420 Query: 421 AAPAAAVPAAPAPAAAPSAPVQAAAPTAPTSAREAALMALRGGKGGK 467 AAPAAAVPAA APAAAPSAPVQAAAP APTSAREAALMALRGGKGGK Sbjct: 421 AAPAAAVPAASAPAAAPSAPVQAAAPAAPTSAREAALMALRGGKGGK 467 >ref|YP_004753462.1| DNA polymerase III subunits gamma and tau [Collimonas fungivorans Ter331] gb|AEK62639.1| DNA polymerase III subunits gamma and tau [Collimonas fungivorans Ter331] Length = 703 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/378 (89%), Positives = 354/378 (93%), Gaps = 1/378 (0%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNC+G DGTGGITA PCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQA+YAP Sbjct: 61 SLNCIGADGTGGITATPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 SNARFKVYMIDEVHMLTNHAFN+MLKTLEEPPEH+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHII HLDNIL QE IEF+ PALRLLAQGA GSMRDALSLTDQAIAYAAGKVTLE Sbjct: 181 KQMPPGHIISHLDNILGQEQIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE 240 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AVQGMLGALDQSYLIR+LDALA +DG LL VADDMA+RSLSY+AALQDLGTLLH+IALA Sbjct: 241 AVQGMLGALDQSYLIRVLDALAAKDGPGLLAVADDMASRSLSYSAALQDLGTLLHRIALA 300 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Q+VPAALADDLP RE+++RLSG F E +QLFYQIAVHGRNELGLAPDEYAGFSMTLLRM Sbjct: 301 QSVPAALADDLPEREEVIRLSGLFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Query: 361 LAFRP-VSASATAPIPAA 377 LAFRP S AP P + Sbjct: 361 LAFRPQADGSIAAPPPVS 378 >ref|YP_001099352.1| DNA polymerase III subunit tau/gamma [Herminiimonas arsenicoxydans] emb|CAL61225.1| DNA polymerase III subunit tau [Contains: DNA polymerase III subunit gamma] [Herminiimonas arsenicoxydans] Length = 682 Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/427 (82%), Positives = 375/427 (87%), Gaps = 2/427 (0%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRP+SFDTLVGQEHVVRALTHALE +RLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALENKRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 S NC+GPDG G ITA PCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQA+YAP Sbjct: 61 SFNCIGPDGNGDITATPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 SNARFKVYMIDEVHMLTNHAFN+MLKTLEEPPEH+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+ HLD+IL QE IEF+ PALRLLAQGA GSMRDALSLTDQAIAYAAGKVTLE Sbjct: 181 KQMPPGHIVAHLDDILGQEQIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE 240 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AVQGMLGALDQS+LIR+LDALA +DGA LL VAD+MATRSLSYNAALQDLG+LLH+IALA Sbjct: 241 AVQGMLGALDQSFLIRLLDALAQKDGAGLLAVADEMATRSLSYNAALQDLGSLLHRIALA 300 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Q VPAAL DDLP R+D+LRL+ F E +QLFYQIAVHGRNELGLAPDEYAGFSMTLLRM Sbjct: 301 QTVPAALPDDLPERDDVLRLAALFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Query: 361 LAFRPVSASATAPIPAASSAPAAAGGRPTAPRQAAPLM-APQVAVTSAPVSRTQAATAPA 419 LAFRP A A A ++APAA P A AA L APQ SAPV+R A +PA Sbjct: 361 LAFRPGYGPAEAQAGAPAAAPAARPSAPVATAPAARLSAAPQAVTNSAPVARP-AGMSPA 419 Query: 420 PAAPAAA 426 AA AA Sbjct: 420 MAALQAA 426 >ref|YP_001354020.1| DNA polymerase III gamma and tau subunit [Janthinobacterium sp. Marseille] gb|ABR88343.1| DNA polymerase III gamma and tau subunit [Janthinobacterium sp. Marseille] Length = 673 Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/365 (88%), Positives = 343/365 (93%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRP+SFDTLVGQEHVVRALTHAL+ QRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALDNQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 S NCVGPDG GGIT+ PCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQA+YAP Sbjct: 61 SFNCVGPDGNGGITSTPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 SNARFKVYMIDEVHMLTNHAFN+MLKTLEEPPEH+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+ HLDNIL QE IEF+ PALRLLAQGA GSMRDALSLTDQAIAYAAGKVTL+ Sbjct: 181 KQMPPGHIVSHLDNILGQENIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLD 240 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AVQGMLGALDQS+LIR+LDALA +DGA LL VAD+MATRSLSYNAALQDL TLLH++ALA Sbjct: 241 AVQGMLGALDQSFLIRLLDALAEKDGAGLLAVADEMATRSLSYNAALQDLCTLLHRVALA 300 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Q VPAA+ +DLP D++RL+G F E +QLFYQIAVHGRNELGLAPDEYAGFSMTLLRM Sbjct: 301 QTVPAAVPEDLPEYADVMRLAGLFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Query: 361 LAFRP 365 LAFRP Sbjct: 361 LAFRP 365 >ref|YP_584277.1| DNA polymerase III subunits gamma and tau [Cupriavidus metallidurans CH34] gb|ABF09008.1| DNA polymerase III tau/gamma subunit [Cupriavidus metallidurans CH34] Length = 795 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 301/396 (76%), Positives = 337/396 (85%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 +LNC GPDG GGITA PCG C+AC ID+GRFVDYIEMDAASNRGVDEMAQLL++AIYAP Sbjct: 61 ALNCTGPDGNGGITAQPCGQCKACTEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAIYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 + RFKVYMIDEVHMLTNHAFNAMLKTLEEPPEH+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+ HLD+IL QEGI D ALRLLAQ A GSMRDALSLTDQAIAY+AG+V+ E Sbjct: 181 KQMPPGHIVSHLDHILAQEGISHDGSALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSEE 240 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AV+GMLGA+DQSYL+++LDALA +DGA +LG+AD MA RSLS+ ALQDLG+LLH++ALA Sbjct: 241 AVRGMLGAIDQSYLVQLLDALAAEDGATMLGIADSMADRSLSFAGALQDLGSLLHKVALA 300 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 QAVPA++ D+ P ED+ RL+ QF + QLFYQIA GR+EL LAPDEYAGF+MTLLRM Sbjct: 301 QAVPASVQDEWPEAEDVRRLARQFDAQETQLFYQIANLGRSELALAPDEYAGFTMTLLRM 360 Query: 361 LAFRPVSASATAPIPAASSAPAAAGGRPTAPRQAAP 396 LAFRP +A A++ RP AAP Sbjct: 361 LAFRPSTAPASSVGGQGGGGQQVVRPRPAGTTSAAP 396 >ref|YP_296320.2| DNA polymerase III subunits gamma and tau [Ralstonia eutropha JMP134] Length = 730 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 310/425 (72%), Positives = 347/425 (81%), Gaps = 23/425 (5%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 +LNC G DG GGITA PCG C+AC ID+GRFVDYIEMDAASNRGVDEMAQLL++A+YAP Sbjct: 61 ALNCTGADGNGGITAQPCGQCKACTEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 + RFKVYMIDEVHMLTNHAFNAMLKTLEEPP H+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPP I+ HLDNIL QEGI D ALRLLAQ A GSMRDALSLTDQAIAY+AG+V+ E Sbjct: 181 KQMPPAQIVSHLDNILGQEGIGHDGNALRLLAQAAHGSMRDALSLTDQAIAYSAGEVSEE 240 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AV+GMLGA+DQ YL+++LDALA +DGAAL+G+AD MA RSLS+ ALQDLG+LLH+IALA Sbjct: 241 AVRGMLGAIDQGYLVQLLDALAAEDGAALIGIADAMADRSLSFAGALQDLGSLLHKIALA 300 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 QAVPA++ D+ P D+ RL+G F + VQLFYQIA GR+EL LAPDEYAGF+MTLLRM Sbjct: 301 QAVPASVQDEWPEAGDVRRLAGVFDAQEVQLFYQIANLGRSELALAPDEYAGFTMTLLRM 360 Query: 361 LAFRPVSASATAPIPAASSAPAAAGGRPTAPRQAAPLMAPQVAVTSAPVSRTQAATAPAP 420 LAFRP +S P+PA SAP GG + P +RT AA+AP Sbjct: 361 LAFRP--SSTPEPLPA--SAPGQGGG-------------------ATPRARTVAASAPVV 397 Query: 421 AAPAA 425 A P A Sbjct: 398 AEPVA 402 >gb|AAZ61476.1| DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit [Ralstonia eutropha JMP134] Length = 745 Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust. Identities = 310/425 (72%), Positives = 347/425 (81%), Gaps = 23/425 (5%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 16 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 75 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 +LNC G DG GGITA PCG C+AC ID+GRFVDYIEMDAASNRGVDEMAQLL++A+YAP Sbjct: 76 ALNCTGADGNGGITAQPCGQCKACTEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAVYAP 135 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 + RFKVYMIDEVHMLTNHAFNAMLKTLEEPP H+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 136 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNL 195 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPP I+ HLDNIL QEGI D ALRLLAQ A GSMRDALSLTDQAIAY+AG+V+ E Sbjct: 196 KQMPPAQIVSHLDNILGQEGIGHDGNALRLLAQAAHGSMRDALSLTDQAIAYSAGEVSEE 255 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AV+GMLGA+DQ YL+++LDALA +DGAAL+G+AD MA RSLS+ ALQDLG+LLH+IALA Sbjct: 256 AVRGMLGAIDQGYLVQLLDALAAEDGAALIGIADAMADRSLSFAGALQDLGSLLHKIALA 315 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 QAVPA++ D+ P D+ RL+G F + VQLFYQIA GR+EL LAPDEYAGF+MTLLRM Sbjct: 316 QAVPASVQDEWPEAGDVRRLAGVFDAQEVQLFYQIANLGRSELALAPDEYAGFTMTLLRM 375 Query: 361 LAFRPVSASATAPIPAASSAPAAAGGRPTAPRQAAPLMAPQVAVTSAPVSRTQAATAPAP 420 LAFRP +S P+PA SAP GG + P +RT AA+AP Sbjct: 376 LAFRP--SSTPEPLPA--SAPGQGGG-------------------ATPRARTVAASAPVV 412 Query: 421 AAPAA 425 A P A Sbjct: 413 AEPVA 417 >ref|YP_004686114.1| DNA polymerase III subunit tau [Cupriavidus necator N-1] gb|AEI77633.1| DNA polymerase III subunit tau [Cupriavidus necator N-1] Length = 778 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 295/382 (77%), Positives = 335/382 (87%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 +LNC+GPDG GGITA PCG C+AC ID+GRFVDYIEMDAASNRGVDEMAQLL++A+YAP Sbjct: 61 ALNCIGPDGNGGITAQPCGQCKACQEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 ++ RFKVYMIDEVHMLTNHAFNAMLKTLEEPP H+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 TSGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+ HLD+IL QEGI D ALRLLAQ A GSMRDALSLTDQAIAY+AG+V+ + Sbjct: 181 KQMPPGHIVSHLDHILAQEGIAHDGNALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSED 240 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AV+GMLGA+DQ YL+++LDALA +DGAA+L +AD MA RSLS+ ALQDLG+LLH++ALA Sbjct: 241 AVRGMLGAIDQGYLVQLLDALAAEDGAAMLAIADAMADRSLSFAGALQDLGSLLHKVALA 300 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 QAVPA++ D+ P +++ RL+G F + VQLFYQIA GR+EL LAPDEYAGF+MTLLRM Sbjct: 301 QAVPASVQDEWPEADEVRRLAGVFDAQEVQLFYQIANLGRSELALAPDEYAGFTMTLLRM 360 Query: 361 LAFRPVSASATAPIPAASSAPA 382 LAFRP S AT +APA Sbjct: 361 LAFRPSSEPATTQGQGGGAAPA 382 >ref|NP_519312.1| DNA polymerase III subunits gamma and tau [Ralstonia solanacearum GMI1000] emb|CAD14893.1| probable dna polymerase III (subunits tau and gamma) protein [Ralstonia solanacearum GMI1000] Length = 728 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 294/378 (77%), Positives = 329/378 (87%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVV+ALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNC+G DG GGITA PCGVC AC IDAGRFVDYIEMDAASNRGVDEMAQLL++A+YAP Sbjct: 61 SLNCIGTDGQGGITAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 + RFKVYMIDEVHMLTNHAFNAMLKTLEEPPEH+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+ HLD IL +EGI + ALRLLA A GSMRDALSLTDQAIAY+AG+VT Sbjct: 181 KQMPPGHIVSHLDRILGEEGIAHEPNALRLLASAAQGSMRDALSLTDQAIAYSAGEVTEA 240 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AV+GMLGA+DQSYL+R+LDALA ++GA L+G+AD+MA RSLS++ ALQDL +LL +IALA Sbjct: 241 AVRGMLGAIDQSYLVRLLDALADENGATLIGIADEMAGRSLSFSGALQDLASLLQKIALA 300 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Q VPAA+ DD P +DI RL+ +F + VQLFYQ A GRNEL LAPDEYAGF+MTLLRM Sbjct: 301 QVVPAAVQDDWPEADDIRRLAERFDAQSVQLFYQFANLGRNELALAPDEYAGFTMTLLRM 360 Query: 361 LAFRPVSASATAPIPAAS 378 LAF+P + AP P+ S Sbjct: 361 LAFQPGQSGGDAPPPSGS 378 >ref|YP_726852.1| DNA polymerase III subunits gamma and tau [Ralstonia eutropha H16] emb|CAJ93484.1| DNA polymerase III tau/gamma subunit [Ralstonia eutropha H16] Length = 784 Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust. Identities = 295/382 (77%), Positives = 334/382 (87%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 25 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 84 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 +LNC GPDG GGITA PCG C+AC ID+GRFVDYIEMDAASNRGVDEMAQLL++A+YAP Sbjct: 85 ALNCTGPDGNGGITAQPCGQCKACQEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAVYAP 144 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 ++ RFKVYMIDEVHMLTNHAFNAMLKTLEEPP H+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 145 TSGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNL 204 Query: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+ HLD+IL QEGI D ALRLLAQ A GSMRDALSLTDQAIAY+AG+V+ + Sbjct: 205 KQMPPGHIVSHLDHILAQEGIGHDGNALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSED 264 Query: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 AV+GMLGA+DQ YL+++LDALA +DGAA+L +AD MA RSLS+ ALQDLG+LLH++ALA Sbjct: 265 AVRGMLGAIDQGYLVQLLDALAAEDGAAMLAIADAMADRSLSFAGALQDLGSLLHKVALA 324 Query: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 QAVPA++ D+ P +++ RL+G F + VQLFYQIA GR+EL LAPDEYAGF+MTLLRM Sbjct: 325 QAVPASVQDEWPEADEVRRLAGVFDAQEVQLFYQIANLGRSELALAPDEYAGFTMTLLRM 384 Query: 361 LAFRPVSASATAPIPAASSAPA 382 LAFRP S TA +APA Sbjct: 385 LAFRPSSEPTTAQGQGGGAAPA 406