BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0005.p (170 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777067.1| DNA polymerase III subunit gamma/tau [Herbas... 332 1e-89 ref|YP_004753462.1| DNA polymerase III subunits gamma and tau [C... 325 1e-87 ref|YP_001354020.1| DNA polymerase III gamma and tau subunit [Ja... 317 3e-85 ref|YP_001099352.1| DNA polymerase III subunit tau/gamma [Hermin... 316 7e-85 ref|YP_002981091.1| DNA polymerase III subunits gamma and tau [R... 303 4e-81 ref|YP_001898615.1| DNA polymerase III subunits gamma and tau [R... 303 7e-81 ref|ZP_07677072.1| DNA polymerase III [Ralstonia sp. 5_7_47FAA] ... 302 1e-80 ref|YP_584277.1| DNA polymerase III subunits gamma and tau [Cupr... 302 1e-80 ref|ZP_08273561.1| DNA polymerase III subunits gamma and tau [Ox... 302 1e-80 emb|CBJ38440.1| DNA polymerase III subunits gamma and tau [Ralst... 301 2e-80 >ref|YP_003777067.1| DNA polymerase III subunit gamma/tau [Herbaspirillum seropedicae SmR1] gb|ADJ65159.1| DNA polymerase III (subunits tau and gamma) protein [Herbaspirillum seropedicae SmR1] Length = 712 Score = 332 bits (850), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 155/157 (98%), Positives = 155/157 (98%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNCVGPDG GGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP Sbjct: 61 SLNCVGPDGAGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIK Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKF 157 >ref|YP_004753462.1| DNA polymerase III subunits gamma and tau [Collimonas fungivorans Ter331] gb|AEK62639.1| DNA polymerase III subunits gamma and tau [Collimonas fungivorans Ter331] Length = 703 Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 150/157 (95%), Positives = 154/157 (98%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNC+G DGTGGITA PCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQA+YAP Sbjct: 61 SLNCIGADGTGGITATPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 SNARFKVYMIDEVHMLTNHAFN+MLKTLEEPPEH+K Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKF 157 >ref|YP_001354020.1| DNA polymerase III gamma and tau subunit [Janthinobacterium sp. Marseille] gb|ABR88343.1| DNA polymerase III gamma and tau subunit [Janthinobacterium sp. Marseille] Length = 673 Score = 317 bits (813), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 146/157 (92%), Positives = 152/157 (96%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRP+SFDTLVGQEHVVRALTHAL+ QRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALDNQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 S NCVGPDG GGIT+ PCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQA+YAP Sbjct: 61 SFNCVGPDGNGGITSTPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 SNARFKVYMIDEVHMLTNHAFN+MLKTLEEPPEH+K Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKF 157 >ref|YP_001099352.1| DNA polymerase III subunit tau/gamma [Herminiimonas arsenicoxydans] emb|CAL61225.1| DNA polymerase III subunit tau [Contains: DNA polymerase III subunit gamma] [Herminiimonas arsenicoxydans] Length = 682 Score = 316 bits (810), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 145/157 (92%), Positives = 151/157 (96%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRP+SFDTLVGQEHVVRALTHALE +RLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALENKRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 S NC+GPDG G ITA PCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQA+YAP Sbjct: 61 SFNCIGPDGNGDITATPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 SNARFKVYMIDEVHMLTNHAFN+MLKTLEEPPEH+K Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKF 157 >ref|YP_002981091.1| DNA polymerase III subunits gamma and tau [Ralstonia pickettii 12D] gb|ACS62419.1| DNA polymerase III, subunits gamma and tau [Ralstonia pickettii 12D] Length = 733 Score = 303 bits (777), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 140/157 (89%), Positives = 147/157 (93%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVV+ALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNCVG DG GGITA PCGVC AC IDAGRFVDYIEMDAASNRGVDEMAQLL++AIYAP Sbjct: 61 SLNCVGADGQGGITAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAIYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 ++ RFKVYMIDEVHMLTNHAFNAMLKTLEEPPEH+K Sbjct: 121 TSGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKF 157 >ref|YP_001898615.1| DNA polymerase III subunits gamma and tau [Ralstonia pickettii 12J] gb|ACD26183.1| DNA polymerase III, subunits gamma and tau [Ralstonia pickettii 12J] Length = 731 Score = 303 bits (775), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 139/157 (88%), Positives = 147/157 (93%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVV+ALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNCVG DG GGITA PCGVC AC IDAGRFVDYIEMDAASNRGVDEMAQLL++A+YAP Sbjct: 61 SLNCVGADGQGGITAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 ++ RFKVYMIDEVHMLTNHAFNAMLKTLEEPPEH+K Sbjct: 121 TSGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKF 157 >ref|ZP_07677072.1| DNA polymerase III [Ralstonia sp. 5_7_47FAA] gb|EFP64553.1| DNA polymerase III [Ralstonia sp. 5_7_47FAA] Length = 731 Score = 302 bits (774), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 139/157 (88%), Positives = 147/157 (93%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVV+ALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNCVG DG GGI+A PCGVC AC IDAGRFVDYIEMDAASNRGVDEMAQLL++AIYAP Sbjct: 61 SLNCVGADGQGGISAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAIYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 ++ RFKVYMIDEVHMLTNHAFNAMLKTLEEPPEH+K Sbjct: 121 TSGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKF 157 >ref|YP_584277.1| DNA polymerase III subunits gamma and tau [Cupriavidus metallidurans CH34] gb|ABF09008.1| DNA polymerase III tau/gamma subunit [Cupriavidus metallidurans CH34] Length = 795 Score = 302 bits (773), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 138/157 (87%), Positives = 146/157 (92%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 +LNC GPDG GGITA PCG C+AC ID+GRFVDYIEMDAASNRGVDEMAQLL++AIYAP Sbjct: 61 ALNCTGPDGNGGITAQPCGQCKACTEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAIYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 + RFKVYMIDEVHMLTNHAFNAMLKTLEEPPEH+K Sbjct: 121 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKF 157 >ref|ZP_08273561.1| DNA polymerase III subunits gamma and tau [Oxalobacteraceae bacterium IMCC9480] gb|EGF32958.1| DNA polymerase III subunits gamma and tau [Oxalobacteraceae bacterium IMCC9480] Length = 287 Score = 302 bits (773), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 140/157 (89%), Positives = 148/157 (94%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRPRSFDTLVGQEHVVRAL+HAL+ RLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 8 MSYQVLARKYRPRSFDTLVGQEHVVRALSHALDTGRLHHAYLFTGTRGVGKTTLSRILAK 67 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 + NC+G DG GGITA PCGVC AC AIDAGRFVDYIE+DAASNRGV+EMAQLLEQA+YAP Sbjct: 68 AFNCIGIDGNGGITATPCGVCAACSAIDAGRFVDYIELDAASNRGVEEMAQLLEQAVYAP 127 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEH+K Sbjct: 128 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKF 164 >emb|CBJ38440.1| DNA polymerase III subunits gamma and tau [Ralstonia solanacearum CMR15] Length = 763 Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 138/157 (87%), Positives = 146/157 (92%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVV+ALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 32 MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 91 Query: 61 SLNCVGPDGTGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 SLNC+G DG GGITA PCGVC AC IDAGRFVDYIEMDAASNRGVDEMAQLL++A+YAP Sbjct: 92 SLNCIGTDGQGGITAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAVYAP 151 Query: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKL 157 + RFKVYMIDEVHMLTNHAFNAMLKTLEEPPEH+K Sbjct: 152 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKF 188