BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0021.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774382.1| branched-chain amino acid ABC transporter AT... 486 e-135 ref|YP_004155771.1| ABC transporter [Variovorax paradoxus EPS] >... 346 2e-93 ref|ZP_07674382.1| branched-chain amino acid ABC transporter, AT... 314 9e-84 ref|YP_002547041.1| ABC transporter nucleotide binding/ATPase pr... 307 8e-82 gb|EGE57887.1| amino acid ABC transporter [Rhizobium etli CNPAF512] 303 2e-80 ref|NP_105923.1| ABC transporter, ATP-binding protein [Mesorhizo... 303 2e-80 ref|YP_004233311.1| ABC transporter-like protein [Acidovorax ave... 302 3e-80 ref|YP_002542293.1| amino acid ABC transporter [Agrobacterium ra... 302 3e-80 ref|NP_396456.2| ABC transporter, nucleotide binding/ATPase prot... 301 6e-80 ref|YP_003451770.1| branched-chain amino acid transport system A... 301 9e-80 >ref|YP_003774382.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62474.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 253 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 246/253 (97%), Positives = 250/253 (98%) Query: 1 MSAPLLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQR 60 MSAPLLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKA SNLLAAQR Sbjct: 1 MSAPLLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAVSNLLAAQR 60 Query: 61 GQVRAGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTV 120 GQVRAGHILY+GREV RSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTV Sbjct: 61 GQVRAGHILYEGREVGRSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTV 120 Query: 121 LRAALERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKV 180 LRAALERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKV Sbjct: 121 LRAALERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKV 180 Query: 181 VADIFAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQ 240 VADIFAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSD+A+ALR+RADIQ Sbjct: 181 VADIFAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDEAQALRQRADIQ 240 Query: 241 SFYFGEGRVLQAA 253 SFYFGEGR LQAA Sbjct: 241 SFYFGEGRGLQAA 253 >ref|YP_004155771.1| ABC transporter [Variovorax paradoxus EPS] gb|ADU37660.1| ABC transporter related protein [Variovorax paradoxus EPS] Length = 256 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 177/252 (70%), Positives = 202/252 (80%) Query: 1 MSAPLLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQR 60 M+ PLL+IEA+E YQ ++ AL VSLEV+AGEIHALLGANGAGKSTTLKA SNLL A+R Sbjct: 1 MTTPLLRIEAVEAAYQRSIAALHGVSLEVRAGEIHALLGANGAGKSTTLKAVSNLLPAER 60 Query: 61 GQVRAGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTV 120 GQV AG I++ G + RSSPA+LVR GL QVLEGRHCF +LTVEENLLTG RR+ Sbjct: 61 GQVTAGRIVFDGHDTGRSSPADLVRLGLVQVLEGRHCFRTLTVEENLLTGALGRSARRSE 120 Query: 121 LRAALERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKV 180 L ++YA FP+L RR++ AGLCSGGEQQM AIGRAL+SRPRLLVLDEPSMGLAP V Sbjct: 121 AAEDLAKVYAIFPKLKDRRKTPAGLCSGGEQQMTAIGRALMSRPRLLVLDEPSMGLAPLV 180 Query: 181 VADIFAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQ 240 V DIF QL RLNRE G+++LVAEQNS VALQYA RATVL+ G +VLS A ALR+RADIQ Sbjct: 181 VRDIFEQLRRLNREAGLSILVAEQNSTVALQYADRATVLDAGVAVLSGDAEALRQRADIQ 240 Query: 241 SFYFGEGRVLQA 252 SFYFGEG V A Sbjct: 241 SFYFGEGAVADA 252 >ref|ZP_07674382.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ralstonia sp. 5_7_47FAA] gb|EFP67202.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ralstonia sp. 5_7_47FAA] Length = 279 Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 162/253 (64%), Positives = 193/253 (76%) Query: 2 SAPLLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQRG 61 SA LL++ +E YQ A++AL V+L VQ GE+HALLGANGAGKS+TLKA SNLL +RG Sbjct: 6 SAVLLRVNGVEATYQNAIVALHNVNLTVQRGEVHALLGANGAGKSSTLKAISNLLVPERG 65 Query: 62 QVRAGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTVL 121 QV AG I++ G +VAR++PA+LVR GL QVLEGR CF +L++E NL+TG R Sbjct: 66 QVTAGTIVFDGHDVARTTPAQLVRLGLVQVLEGRRCFPNLSIESNLVTGALGRSASRAET 125 Query: 122 RAALERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKVV 181 A LER+YA FP+L RRR AGL SGGEQQM AIGRAL+SRPRLLVLDEPSMGLAP VV Sbjct: 126 AADLERVYAIFPRLKARRRVAAGLTSGGEQQMAAIGRALMSRPRLLVLDEPSMGLAPLVV 185 Query: 182 ADIFAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQS 241 DIFA+L +LNRE+G+++LVAEQNS VALQYA R TVLE G +VL+D A AL +R DIQ Sbjct: 186 QDIFARLRQLNREDGLSILVAEQNSTVALQYADRTTVLEAGVTVLNDTAEALGQREDIQH 245 Query: 242 FYFGEGRVLQAAA 254 FYFG QA A Sbjct: 246 FYFGRDVAHQAPA 258 >ref|YP_002547041.1| ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) [Agrobacterium vitis S4] gb|ACM38325.1| ABC transporter nucleotide binding/ATPase protein (branched chain amino acid) [Agrobacterium vitis S4] Length = 257 Score = 307 bits (787), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 152/245 (62%), Positives = 187/245 (76%) Query: 2 SAPLLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQRG 61 A LLQ++ + Y A+ AL VS + GEI ALLGANGAGK+T LKA SNLL+A+RG Sbjct: 3 DARLLQVDGLHATYNHAITALHGVSFSLARGEILALLGANGAGKTTALKAVSNLLSAERG 62 Query: 62 QVRAGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTVL 121 Q+ AG I + G +V ++SPA LVR GL QVLEGRHCF SL+VEENL G + R + Sbjct: 63 QINAGSIHFDGVDVTKTSPAALVRAGLVQVLEGRHCFHSLSVEENLTCGGLGRSSSRAEI 122 Query: 122 RAALERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKVV 181 LERIY FP+L ++RR+L+GL SGGEQQM A+GRAL+SRPRLLVLDEPSMGLAP VV Sbjct: 123 ANDLERIYGLFPRLKEKRRTLSGLTSGGEQQMTAVGRALMSRPRLLVLDEPSMGLAPIVV 182 Query: 182 ADIFAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQS 241 DIF L RLNREEG+++LVAEQNSA+AL YAHRAT+LE+G+ VL+ AR +RER D++S Sbjct: 183 QDIFRTLRRLNREEGLSILVAEQNSAIALTYAHRATILENGKDVLTGTAREIRERDDVKS 242 Query: 242 FYFGE 246 FY G+ Sbjct: 243 FYLGQ 247 >gb|EGE57887.1| amino acid ABC transporter [Rhizobium etli CNPAF512] Length = 264 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 150/242 (61%), Positives = 187/242 (77%) Query: 5 LLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQRGQVR 64 LL ++ ++ Y GA+ AL VS ++ GEI ALLGANGAGK+TTLKA SNLL A+RG++ Sbjct: 7 LLSVDGVKATYNGAITALHGVSFTLRRGEILALLGANGAGKTTTLKAISNLLPAERGEIT 66 Query: 65 AGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTVLRAA 124 AG ILYQG +V ++ PAELVR GL QVLEGRHCF +LTVEENL+ G R + A Sbjct: 67 AGSILYQGLDVTKAKPAELVRAGLVQVLEGRHCFRNLTVEENLIAGGLGRSGSRAEIAAD 126 Query: 125 LERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKVVADI 184 LERIYA FP+L +RR+L+GL SGGEQQM+AIGRAL+SRP LLVLDEPSMGLAP +V DI Sbjct: 127 LERIYAIFPRLKDKRRALSGLASGGEQQMVAIGRALMSRPTLLVLDEPSMGLAPIIVQDI 186 Query: 185 FAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQSFYF 244 F L RLN E G+++LVAEQNSA+AL+YA RAT+LE+G + LS A LR+R D+++FY Sbjct: 187 FRTLRRLNAESGLSILVAEQNSAIALRYADRATILENGTAALSGDAAQLRQRDDVKAFYL 246 Query: 245 GE 246 G+ Sbjct: 247 GQ 248 >ref|NP_105923.1| ABC transporter, ATP-binding protein [Mesorhizobium loti MAFF303099] dbj|BAB51709.1| ABC transporter, ATP-binding protein [Mesorhizobium loti MAFF303099] Length = 268 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 153/242 (63%), Positives = 185/242 (76%) Query: 5 LLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQRGQVR 64 +L ++ I Y A+ AL VS E++ GEI ALLGANGAGK+TTLKA SNLL A+RGQV Sbjct: 7 ILAVDTIHATYNHAITALHGVSFEIRRGEILALLGANGAGKTTTLKAVSNLLPAERGQVN 66 Query: 65 AGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTVLRAA 124 AG I Y G +V+R P +LVR GL VLEGRHCF SLTVEENL+ G RR + Sbjct: 67 AGTICYDGADVSRRKPGDLVRAGLVPVLEGRHCFKSLTVEENLVAGGIGRSGRRAEINQD 126 Query: 125 LERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKVVADI 184 LERIYA+FP+L ++RR+L+GL SGGEQQM AIGRAL+SRPRLLVLDEPSMGLAP +V DI Sbjct: 127 LERIYAYFPRLKEKRRTLSGLTSGGEQQMTAIGRALMSRPRLLVLDEPSMGLAPLIVQDI 186 Query: 185 FAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQSFYF 244 F L +LNRE G+++LVAEQNSAVAL+YA ATVLE+G SVLS A LR+R D+++FY Sbjct: 187 FQTLRKLNRETGLSILVAEQNSAVALRYADHATVLENGVSVLSGAAADLRQREDVRAFYL 246 Query: 245 GE 246 G+ Sbjct: 247 GQ 248 >ref|YP_004233311.1| ABC transporter-like protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44744.1| ABC transporter related protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 262 Score = 302 bits (774), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 158/245 (64%), Positives = 189/245 (77%) Query: 3 APLLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQRGQ 62 APLL+++ + V Y+GA+ AL+ VSL+V+AGEIHALLGANGAGKST L+A S LL A RGQ Sbjct: 8 APLLRLQDVHVHYRGAIAALQGVSLDVRAGEIHALLGANGAGKSTVLRAVSQLLPALRGQ 67 Query: 63 VRAGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTVLR 122 V G I + G +V R++P LVR GL VLEGRHCF SLT+EENL+ G R+ Sbjct: 68 VARGSIAFAGADVLRATPDMLVRSGLVPVLEGRHCFPSLTIEENLVAGGLGGGAPRSRFA 127 Query: 123 AALERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKVVA 182 LER+YA FP+LH RR+ AGL SGGEQQM AIGRAL++RPRLLVLDEPSMGLAP+ V Sbjct: 128 QDLERVYAAFPRLHALRRTPAGLASGGEQQMAAIGRALMARPRLLVLDEPSMGLAPRTVE 187 Query: 183 DIFAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQSF 242 DIF +L+RLNREEG+ LL+AEQNS VAL++AHRATVLE GRS L A LR RADI++ Sbjct: 188 DIFRELARLNREEGLTLLIAEQNSTVALRHAHRATVLETGRSALCGSAADLRGRADIRAL 247 Query: 243 YFGEG 247 YFGEG Sbjct: 248 YFGEG 252 >ref|YP_002542293.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gb|ACM30696.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 264 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 150/242 (61%), Positives = 190/242 (78%) Query: 5 LLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQRGQVR 64 LL ++ I+ Y GA+ AL VS ++ GEI ALLGANGAGK+TTLKA SNLL A+RG++ Sbjct: 7 LLSVDGIKATYNGAITALHGVSFTLRRGEILALLGANGAGKTTTLKAISNLLPAERGEIT 66 Query: 65 AGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTVLRAA 124 AG ILY+GR+V ++PA+LVR GL QVLEGRHCF +LT+EENL++G R + Sbjct: 67 AGSILYEGRDVTTATPAQLVRAGLVQVLEGRHCFRNLTIEENLVSGGLGRSGSRAEIAFD 126 Query: 125 LERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKVVADI 184 LE+IYA FP+L ++RR+LAGL SGGEQQM AIGRAL+SRP LLVLDEPSMGLAP VV DI Sbjct: 127 LEKIYALFPRLKEKRRALAGLTSGGEQQMTAIGRALMSRPALLVLDEPSMGLAPIVVQDI 186 Query: 185 FAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQSFYF 244 F L RLN + G+++LVAEQNSA+AL+YA RATVLE+G +VLS +A LR+R D+++FY Sbjct: 187 FKTLRRLNAKTGLSILVAEQNSAIALRYADRATVLENGVAVLSGEAAELRQRDDVKAFYL 246 Query: 245 GE 246 G+ Sbjct: 247 GQ 248 >ref|NP_396456.2| ABC transporter, nucleotide binding/ATPase protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] gb|AAK90897.2| ABC transporter, nucleotide binding/ATPase protein (branched chain amino acid) [Agrobacterium tumefaciens str. C58] Length = 259 Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 156/250 (62%), Positives = 185/250 (74%) Query: 5 LLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQRGQVR 64 LL +E + Y A+ AL V+L + GEI A+LGANGAGK+TTLKA SNLL A+RGQV Sbjct: 7 LLTVEGLHATYNHAITALHGVTLSLGRGEILAILGANGAGKTTTLKAVSNLLPAERGQVV 66 Query: 65 AGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTVLRAA 124 AGHIL+ GR V +PA LVR GL QVLEGRHCF +LTVEENL++G R + Sbjct: 67 AGHILFDGRAVTHETPARLVRLGLVQVLEGRHCFKALTVEENLVSGGLGRSASRAEIAVD 126 Query: 125 LERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKVVADI 184 LE+IY FP+L ++RR L+GL SGGEQQM AIGRAL+SRPRLLVLDEPSMGLAP+VV DI Sbjct: 127 LEKIYTHFPRLKEKRRVLSGLTSGGEQQMTAIGRALMSRPRLLVLDEPSMGLAPRVVQDI 186 Query: 185 FAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQSFYF 244 F L LNREEG+++LVAEQNSAVAL YA RA +LE+G SVLS A LR R D+++FY Sbjct: 187 FRTLKHLNREEGLSILVAEQNSAVALNYADRAVILENGVSVLSGTAAELRARDDVKAFYL 246 Query: 245 GEGRVLQAAA 254 GE AAA Sbjct: 247 GEKPSASAAA 256 >ref|YP_003451770.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] dbj|BAI75226.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] Length = 260 Score = 301 bits (770), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 156/247 (63%), Positives = 185/247 (74%) Query: 1 MSAPLLQIEAIEVRYQGALLALEEVSLEVQAGEIHALLGANGAGKSTTLKAASNLLAAQR 60 ++ LL ++ +E Y A+ AL VSL V+ GEI ALLGANGAGK+T LKA S LL A+R Sbjct: 3 INETLLSLDGVEATYNHAIRALSGVSLSVRTGEIVALLGANGAGKTTALKALSGLLPAER 62 Query: 61 GQVRAGHILYQGREVARSSPAELVRQGLAQVLEGRHCFASLTVEENLLTGWPAHFTRRTV 120 GQ+ AG I+Y G +V R SPAELVR GL QVLEGRHCF SLTVE+NL+ G R Sbjct: 63 GQIAAGSIVYDGEDVTRRSPAELVRAGLVQVLEGRHCFRSLTVEDNLIVGGQVRGLGRIA 122 Query: 121 LRAALERIYAFFPQLHQRRRSLAGLCSGGEQQMLAIGRALISRPRLLVLDEPSMGLAPKV 180 R+ L+RIYA FP+L +R +LAGL SGGEQQM AIGRAL++RPRLLVLDEPSMGLAP V Sbjct: 123 QRSELDRIYALFPRLRDKRGTLAGLTSGGEQQMAAIGRALMARPRLLVLDEPSMGLAPLV 182 Query: 181 VADIFAQLSRLNREEGVALLVAEQNSAVALQYAHRATVLEHGRSVLSDQARALRERADIQ 240 V IF L RLNREEG+++LVAEQNS VAL++A RATVLE GR+VL A LRER DI+ Sbjct: 183 VESIFDALKRLNREEGLSILVAEQNSTVALRHADRATVLETGRTVLDGPAADLRERDDIK 242 Query: 241 SFYFGEG 247 +FY G G Sbjct: 243 AFYLGFG 249