BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0002.p         (550 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774405.1| acyl-CoA dehydrogenase [Herbaspirillum serop...  1117   0.0  
ref|YP_004753463.1| acyl-CoA dehydrogenase [Collimonas fungivora...   789   0.0  
ref|YP_001099351.1| putative acyl-CoA dehydrogenase (flavoprotei...   760   0.0  
ref|YP_001354021.1| acyl-CoA dehydrogenase [Janthinobacterium sp...   739   0.0  
ref|YP_001897375.1| acyl-CoA dehydrogenase domain-containing pro...   713   0.0  
ref|YP_560810.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans...   712   0.0  
ref|YP_004362334.1| Acyl-CoA dehydrogenase domain protein [Burkh...   704   0.0  
ref|ZP_02461930.1| acyl-CoA dehydrogenase domain protein [Burkho...   701   0.0  
ref|YP_331824.1| Acyl-CoA dehydrogenase [Burkholderia pseudomall...   701   0.0  
ref|ZP_01770281.1| acyl-CoA dehydrogenase domain protein [Burkho...   701   0.0  

>ref|YP_003774405.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gb|ADJ62497.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 550

 Score = 1117 bits (2889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/550 (99%), Positives = 547/550 (99%)

Query: 1   MHTHEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELA 60
           MHTHEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLG AEMREMAELA
Sbjct: 1   MHTHEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGGAEMREMAELA 60

Query: 61  NRHAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFL 120
           NRH PVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFL
Sbjct: 61  NRHTPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFL 120

Query: 121 HAQIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGM 180
           HAQIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGM
Sbjct: 121 HAQIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGM 180

Query: 181 TEKQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENGLSCF 240
           TEKQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENGLSCF
Sbjct: 181 TEKQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENGLSCF 240

Query: 241 FVPRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT 300
           FVPRWLPDG RNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT
Sbjct: 241 FVPRWLPDGTRNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT 300

Query: 301 RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV 360
           RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV
Sbjct: 301 RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV 360

Query: 361 AHAFDAPDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYREA 420
           AHAFDAPDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYREA
Sbjct: 361 AHAFDAPDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYREA 420

Query: 421 PVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAAPE 480
           PVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAAPE
Sbjct: 421 PVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAAPE 480

Query: 481 EEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQADGGRVYGTLGSASLAAQE 540
           EEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQADGGRVYGTLGSASLAAQE
Sbjct: 481 EEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQADGGRVYGTLGSASLAAQE 540

Query: 541 AILQRAWPEA 550
           AILQRAWPEA
Sbjct: 541 AILQRAWPEA 550


>ref|YP_004753463.1| acyl-CoA dehydrogenase [Collimonas fungivorans Ter331]
 gb|AEK62640.1| Acyl-CoA dehydrogenase [Collimonas fungivorans Ter331]
          Length = 548

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/546 (71%), Positives = 443/546 (81%), Gaps = 3/546 (0%)

Query: 2   HTHEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELAN 61
            THE+TNQVP+L G NLY  D  L   VQR    W    LA  G  LGS E  ++AELAN
Sbjct: 4   QTHEVTNQVPELYGNNLYLDDTILQAGVQRLHGQWRAEQLARYGAELGSKESWQLAELAN 63

Query: 62  RHAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLH 121
           RH P L+T DR G RID VEFHPAWH LL  LRR GLHALPW++P  G+H ARAAGYFLH
Sbjct: 64  RHQPELNTFDRLGNRIDAVEFHPAWHALLGMLRRQGLHALPWIKPQSGSHVARAAGYFLH 123

Query: 122 AQIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMT 181
           AQ+EAGSLCPTTMTFA+I VLQQEPALF  L+ +L S EHD+RDL +  K SIL+GMGMT
Sbjct: 124 AQLEAGSLCPTTMTFASIPVLQQEPALFAALQAKLLSCEHDSRDLALEHKNSILLGMGMT 183

Query: 182 EKQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENGLSCFF 241
           EKQGGSDVRSN + A+P++    GRGA YLL+GHKWFFSAPMCDAH++LARTE GLSCFF
Sbjct: 184 EKQGGSDVRSNTTTAVPLE-GGGGRGAGYLLTGHKWFFSAPMCDAHMVLARTEMGLSCFF 242

Query: 242 VPRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHTR 301
           VPRW PDG++N + IQRLKDKLGNRSNSSSEVEF EA GIMVGDEGRGIPTIIEMANHTR
Sbjct: 243 VPRWRPDGSKNQVQIQRLKDKLGNRSNSSSEVEFREAFGIMVGDEGRGIPTIIEMANHTR 302

Query: 302 LDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRVA 361
           LDC+IGSA L+RQALVQA+HHARHRSAFGR LAEQPLM+ VL+DLALESEAAT+LML++A
Sbjct: 303 LDCVIGSAGLIRQALVQALHHARHRSAFGRHLAEQPLMQNVLSDLALESEAATLLMLQLA 362

Query: 362 HAFDAPDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYREAP 421
            AF+ PDDPLQRAW+RI+TPAAKFW+CKR LEF+GECME+WGGNGYVET PMAR YREAP
Sbjct: 363 SAFEHPDDPLQRAWRRIVTPAAKFWVCKRALEFSGECMEIWGGNGYVETGPMARFYREAP 422

Query: 422 VNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAAPEE 481
           VNSIWEGSGNVMCLDVLRA+ RE  G  LLL +L + A  HP LR  +D L++ LA P E
Sbjct: 423 VNSIWEGSGNVMCLDVLRAIEREPAGFGLLLAQLAETARDHPGLRAMLDDLQKDLATPAE 482

Query: 482 EREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQADGGRVYGTLGSASLAAQEA 541
           +RE   RR VQ+LVL +QG LML+HAP+  A AF+ SRS+A GGRVYGTL +A L  Q+ 
Sbjct: 483 QREMLGRRFVQRLVLTVQGALMLQHAPSVIADAFIASRSEAMGGRVYGTLAAAHL--QQQ 540

Query: 542 ILQRAW 547
           ILQR W
Sbjct: 541 ILQRTW 546


>ref|YP_001099351.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB
           protein [Herminiimonas arsenicoxydans]
 emb|CAL61224.1| isovaleryl CoA dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 551

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/550 (68%), Positives = 434/550 (78%), Gaps = 8/550 (1%)

Query: 3   THEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELANR 62
           THE++NQ PDL  YNLY SD ALA  VQRE A WH+  L   G  LG  +  ++ +LAN 
Sbjct: 5   THEVSNQAPDLHDYNLYTSDLALAAGVQREQAGWHEQDLIRYGAELGMQQTLQLGQLANH 64

Query: 63  HAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLHA 122
           H P LHTHDR G RID VEFHP+WH LL   RR  LHA+PW Q   G H AR A Y+L A
Sbjct: 65  HLPELHTHDRFGHRIDTVEFHPSWHQLLAMQRRENLHAMPWSQARAGVHVARTAAYYLQA 124

Query: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182
           Q+E+GSLCPTTMTFAAI +LQQEPALF  L+ +LF+REHD RDLP  QK S+LIGMGMTE
Sbjct: 125 QVESGSLCPTTMTFAAIPLLQQEPALFAALQAKLFAREHDPRDLPWAQKHSMLIGMGMTE 184

Query: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENGLSCFFV 242
           KQGGSDVRSN ++A  V     GRGA Y L+GHKWFFSAPMCDAHL+LARTENGLSCFFV
Sbjct: 185 KQGGSDVRSNTTVARAVH--GSGRGADYALTGHKWFFSAPMCDAHLVLARTENGLSCFFV 242

Query: 243 PRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHTRL 302
           PRW PDG+RN +LIQ+LKDKLGNRSNSSSEVEF++A G+MVG+EGRGIPTIIEMANHTRL
Sbjct: 243 PRWRPDGSRNAVLIQQLKDKLGNRSNSSSEVEFQDAYGVMVGEEGRGIPTIIEMANHTRL 302

Query: 303 DCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV-- 360
           DC+IGSA LMR ALVQAIHHARHRSAFG  LAEQPLMR VL+DLALESEAAT+LMLR+  
Sbjct: 303 DCVIGSAGLMRNALVQAIHHARHRSAFGHPLAEQPLMRNVLSDLALESEAATLLMLRLAR 362

Query: 361 --AHAFDAPDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYR 418
               + DAPDD L+RAW+RI+TPAAKFW+CKR LEF+GECMEVWGGNGY+E APMAR++R
Sbjct: 363 AADASRDAPDDLLERAWRRILTPAAKFWVCKRVLEFSGECMEVWGGNGYIENAPMARMFR 422

Query: 419 EAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAA 478
           EAPVNSIWEGSGNVMCLDVLRA+ RE +G ALLL  L D+A  H  LR  + +L   LA 
Sbjct: 423 EAPVNSIWEGSGNVMCLDVLRAIEREAEGFALLLQNLQDSAGTHAGLRALIASLHNDLAL 482

Query: 479 PEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQADGGRVYGTLGSASLAA 538
           P +++E  ARR  Q+LVLA Q  LML+HAPA  A+AF+ SR  A+ GRV+GTL + +L  
Sbjct: 483 PPQQQEMQARRFAQRLVLAAQASLMLQHAPASVAEAFIASRIDAECGRVFGTLPATAL-- 540

Query: 539 QEAILQRAWP 548
           Q  +L RAWP
Sbjct: 541 QYDMLARAWP 550


>ref|YP_001354021.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
 gb|ABR89320.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille]
          Length = 547

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/546 (67%), Positives = 430/546 (78%), Gaps = 4/546 (0%)

Query: 3   THEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELANR 62
           THE++NQVP+L  YNL+  D+ L  A++   A W+   LA+ G  LG+ E  ++ +LAN+
Sbjct: 5   THEVSNQVPELLDYNLFSCDSVLVTAIKNSAASWYAPELAALGAALGTRETLQLGQLANQ 64

Query: 63  HAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLHA 122
           H P L THDR G RID V+FHP+WH LL   RRA LHALPW QP  GAH AR A Y+L A
Sbjct: 65  HLPELQTHDRFGNRIDRVDFHPSWHQLLAMQRRASLHALPWSQPRAGAHIARTAAYYLQA 124

Query: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182
           Q+E+GSLCP TMTFAAI +LQQEPALF  L+ +LFS  HD RDLP+P K S+L+GMGMTE
Sbjct: 125 QVESGSLCPVTMTFAAIPLLQQEPALFATLKDKLFSTGHDERDLPLPDKASMLVGMGMTE 184

Query: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTENGLSCFFV 242
           KQGGSDVRSN ++A P++  + GRG  Y L+GHKWFFSAPMCDAHL+LARTE GLSCFFV
Sbjct: 185 KQGGSDVRSNTTVARPLE--SAGRGQPYALTGHKWFFSAPMCDAHLVLARTEAGLSCFFV 242

Query: 243 PRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHTRL 302
           PRW PDG++N ILIQRLKDKLGNRSNSSSEVEF++A G+MVG++GRGIPTIIEMANHTRL
Sbjct: 243 PRWRPDGSKNAILIQRLKDKLGNRSNSSSEVEFQDAYGVMVGEDGRGIPTIIEMANHTRL 302

Query: 303 DCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRVAH 362
           DC+IGS  LMR ALVQAIHHARHR AFG  LAEQ LM+ VLADLALESEAAT LMLR+A 
Sbjct: 303 DCVIGSTGLMRNALVQAIHHARHRHAFGLPLAEQALMQNVLADLALESEAATRLMLRLAQ 362

Query: 363 AFDAPDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYREAPV 422
           A +A DDP++RAW+R++TPAAKFWICKR LEFTGECMEVWGGNGYVE APMAR+YREAPV
Sbjct: 363 AAEAIDDPVERAWRRVVTPAAKFWICKRALEFTGECMEVWGGNGYVENAPMARMYREAPV 422

Query: 423 NSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAAPEEE 482
           NSIWEGSGNVMCLDVLRA+A+E     LLL  L D A     LR+ +  L+  LA P  +
Sbjct: 423 NSIWEGSGNVMCLDVLRAIAKEADAFKLLLDALLDIAKEDKGLRELIAELRTDLALPATQ 482

Query: 483 REAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQADGGRVYGTLGSASLAAQEAI 542
           +E  ARR  Q+LVL  Q  LML+ APA  A AF+ SR  A+ GRVYGTL +A LAA+E I
Sbjct: 483 QEMQARRFTQRLVLVAQSCLMLQAAPANIADAFISSRLDAESGRVYGTL-AAPLAAKE-I 540

Query: 543 LQRAWP 548
           L+RAWP
Sbjct: 541 LERAWP 546


>ref|YP_001897375.1| acyl-CoA dehydrogenase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gb|ACD18151.1| acyl-CoA dehydrogenase domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 561

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/556 (64%), Positives = 419/556 (75%), Gaps = 14/556 (2%)

Query: 3   THEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELANR 62
           THE+TNQVP L+ YNL+ SDAAL+ A++R+GA WH   L   G  L + E   +AELANR
Sbjct: 9   THEVTNQVPPLADYNLFSSDAALSAALERDGAGWHRGALVRHGAALTTPETLALAELANR 68

Query: 63  HAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLHA 122
           H P L TH   G RID +EFHP+WH LL  LRR GLHALP+  P  GA  AR AGYFLHA
Sbjct: 69  HEPELVTHSPRGERIDALEFHPSWHALLSLLRREGLHALPFSDPQRGAMVARCAGYFLHA 128

Query: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182
           QIE+GSLCP TMTFA+I VLQ+EPALF  LR +L++REHD+RDLP+ QK S +IGMGMTE
Sbjct: 129 QIESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDSRDLPLKQKTSAMIGMGMTE 188

Query: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTE--NGLSCF 240
           KQGGSDVRSN + A        GRGAAY L GHKWFFSAP CDAHL+L RT+   GLSCF
Sbjct: 189 KQGGSDVRSNQTRAYST--AGSGRGAAYRLVGHKWFFSAPQCDAHLVLGRTDEHEGLSCF 246

Query: 241 FVPRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT 300
           +VPR+ PDG +N + IQRLKDKLGNRSN+SSEVEF +A GIM+GDEGRG+PTIIEMAN+T
Sbjct: 247 YVPRFAPDGRKNNVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGDEGRGVPTIIEMANYT 306

Query: 301 RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV 360
           RLDC+IGSAALMR ALVQAIHHARHRSAFGR LA+QPLMR VLADLALESEAAT+L +R+
Sbjct: 307 RLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLADLALESEAATVLFMRL 366

Query: 361 AHAFDAPDDP-----LQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMAR 415
           A AF+   D       +RAW+RI+TPAAK+W+CKR LEFTGE MEVWGGNGYVET PMAR
Sbjct: 367 ARAFEESTDAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGYVETGPMAR 426

Query: 416 LYREAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQM 475
            YREAPVNSIWEGSGNVMCLDVLRAM RE +    L       A  HPAL   +  L   
Sbjct: 427 FYREAPVNSIWEGSGNVMCLDVLRAMEREPEAAQALFAAWHADAQAHPALSAALGKLAAT 486

Query: 476 LAAPEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESR---SQADGGRVYGTLG 532
           L  P E REA ARR+ QQ+VL  Q  L+L+HAPA  A+AF+ +R      + GRVYGTL 
Sbjct: 487 LNGPAEHREASARRIAQQVVLIAQATLLLKHAPAEVAEAFVATRLAEGCGESGRVYGTLP 546

Query: 533 SASLAAQEAILQRAWP 548
           +    A  AI++RA+P
Sbjct: 547 ATFDHA--AIIERAFP 560


>ref|YP_560810.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
 gb|ABE32758.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 561

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/557 (65%), Positives = 419/557 (75%), Gaps = 16/557 (2%)

Query: 3   THEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELANR 62
           THE+TNQVP L+ YNL+ SDAAL  A++R+GA WH   L   G  L + E   +AELANR
Sbjct: 9   THEVTNQVPPLADYNLFSSDAALTAALERDGAAWHRDALLRHGAALTTPETLALAELANR 68

Query: 63  HAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLHA 122
           H P L TH   G RID +EFHP+WHTLL  LRR GLHALP+  P  GA  AR AGYFLHA
Sbjct: 69  HTPELFTHSPRGERIDALEFHPSWHTLLSLLRREGLHALPFSDPQRGAMVARCAGYFLHA 128

Query: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182
           QIE+GSLCP TMTFA+I VLQ+EPALF +LR +L++REHD RD+P+  K S +IGMGMTE
Sbjct: 129 QIESGSLCPLTMTFASIPVLQREPALFARLRDKLYAREHDPRDVPLTHKNSAMIGMGMTE 188

Query: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTEN--GLSCF 240
           KQGGSDVRSN + A        GRGAAY L GHKWFFSAP CDAHL+L RT++  GLSCF
Sbjct: 189 KQGGSDVRSNQTRAYAT--AGSGRGAAYRLVGHKWFFSAPQCDAHLVLGRTDDHEGLSCF 246

Query: 241 FVPRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT 300
           FVPR+ PDG++N + IQRLKDKLGNRSN+SSEVEF +A GIM+GDEGRG+PTIIEMAN+T
Sbjct: 247 FVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAFGIMIGDEGRGVPTIIEMANYT 306

Query: 301 RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV 360
           RLDC+IGSAALMR ALVQAIHHARHRSAFGR LA+QPLMR VLADLALESEAAT+L +R+
Sbjct: 307 RLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLMRNVLADLALESEAATVLFMRL 366

Query: 361 AHAFDAPDDP-----LQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMAR 415
           A AF+   D       +RAW+RI+TPAAK+W+CKR LEFTGE MEVWGGNGYVET PMAR
Sbjct: 367 ARAFEESADAASTSLAERAWRRIVTPAAKYWVCKRALEFTGEAMEVWGGNGYVETGPMAR 426

Query: 416 LYREAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQM 475
            YREAPVNSIWEGSGNVMCLDVLRAM RE      L       A  HPAL   +  L   
Sbjct: 427 FYREAPVNSIWEGSGNVMCLDVLRAMEREPDAARALFAAWQREAQAHPALSAALGKLAAA 486

Query: 476 LAAPEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQADG----GRVYGTL 531
              P E REA ARR+ QQ+VL  Q  L+L HAPA  A+AF+ +R  ADG    GRVYGTL
Sbjct: 487 FNGPAEHREASARRIAQQVVLIAQATLLLEHAPAEVAEAFIATR-LADGCGESGRVYGTL 545

Query: 532 GSASLAAQEAILQRAWP 548
            +    A  AI++RA+P
Sbjct: 546 PATFDHA--AIVERAFP 560


>ref|YP_004362334.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
 gb|AEA62378.1| Acyl-CoA dehydrogenase domain protein [Burkholderia gladioli BSR3]
          Length = 557

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/553 (64%), Positives = 421/553 (76%), Gaps = 12/553 (2%)

Query: 3   THEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELANR 62
           TH +TNQ P L+ YN + +D ALA AV+R GA WH   L+  G  L +A+   +AELANR
Sbjct: 9   THRVTNQAPPLTDYNAFETDLALAAAVERHGAGWHQTALSRHGAALTTADTLALAELANR 68

Query: 63  HAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLHA 122
           H P L TH   G RID +EFHP+WH LL  LR  GLHALP+ +P  GA AAR AGYFLHA
Sbjct: 69  HTPELSTHSARGERIDALEFHPSWHQLLALLRGEGLHALPFAEPRAGAMAARCAGYFLHA 128

Query: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182
           Q+E+GSLCP TMTFA+I VL++EPALF+ LR RL++REHD RD+P+  KRS++IGMGMTE
Sbjct: 129 QLESGSLCPLTMTFASIPVLKKEPALFDTLRERLYTREHDPRDIPLAGKRSMMIGMGMTE 188

Query: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTEN--GLSCF 240
           KQGGSDVRSN + A P+     GRG  Y L GHKWFFSAP CDAHL+LART+   G+SCF
Sbjct: 189 KQGGSDVRSNETRAWPLGA--GGRGQPYRLVGHKWFFSAPQCDAHLVLARTDEHAGISCF 246

Query: 241 FVPRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT 300
           +VPR+ PDG++N + +QRLKDKLGNRSN+SSEVEF +A G+MVG+EGRG+PTIIEMAN T
Sbjct: 247 YVPRFSPDGSKNAVQVQRLKDKLGNRSNASSEVEFLDAYGVMVGEEGRGVPTIIEMANMT 306

Query: 301 RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV 360
           RLDC+IGSAALMR ALVQAIHHARHRSAFGR LAEQPLMR VLADLA+ESEAATML +R+
Sbjct: 307 RLDCVIGSAALMRAALVQAIHHARHRSAFGRLLAEQPLMRNVLADLAIESEAATMLFMRL 366

Query: 361 AHAFDAPD--DPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLYR 418
           A A +  D      R W+RI+TPAAKFW+CKR +EFTGE MEVWGGNGYVET PMAR YR
Sbjct: 367 ADAVEHDDGSSAEARGWRRIVTPAAKFWVCKRAIEFTGEAMEVWGGNGYVETGPMARFYR 426

Query: 419 EAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLAA 478
           EAPVNSIWEGSGNVMCLDVLRA+ R+ +  A L+    +AAAGHP L + +D L    A 
Sbjct: 427 EAPVNSIWEGSGNVMCLDVLRAVERQPESAAALVAAWREAAAGHPELLRAIDQLLDAFAL 486

Query: 479 PEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQA---DGGRVYGTLGSAS 535
           P EEREA ARR+ Q++ L  Q  L++RHAPA  A AF+ +R  A   D GRVYGTL +  
Sbjct: 487 PAEEREASARRIAQRIALIAQASLLIRHAPAAMADAFIATRLGAASHDTGRVYGTLPAFD 546

Query: 536 LAAQEAILQRAWP 548
                A+L RA+P
Sbjct: 547 ---HGALLARAFP 556


>ref|ZP_02461930.1| acyl-CoA dehydrogenase domain protein [Burkholderia thailandensis
           MSMB43]
          Length = 559

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/554 (63%), Positives = 418/554 (75%), Gaps = 12/554 (2%)

Query: 3   THEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELANR 62
           TH +TNQ P LS YN + +DAAL +AV+R  A WH   L+  G  L + +   +AELANR
Sbjct: 9   THRVTNQAPPLSDYNAFETDAALVDAVRRYDASWHQTALSRDGAALTTPDALALAELANR 68

Query: 63  HAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLHA 122
           HAP L TH   G RID +EFHP+WH LL  LR  GLHALP+ +P  GA AAR AGYFLHA
Sbjct: 69  HAPELATHSPRGERIDALEFHPSWHQLLALLRGEGLHALPFSEPQPGAMAARCAGYFLHA 128

Query: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182
           Q+E+GSLCP TMTFA+I VLQ EPALF  LR +L++REHDARD+P+PQKRS+++GMGMTE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQHEPALFATLRDKLYAREHDARDVPLPQKRSMMVGMGMTE 188

Query: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLARTEN--GLSCF 240
           KQGGSDVRSN + A P+     GRG AY L GHKWFFSAP CDAHL+LART    G+SCF
Sbjct: 189 KQGGSDVRSNETHAYPLGAA--GRGQAYRLVGHKWFFSAPQCDAHLVLARTSGRAGISCF 246

Query: 241 FVPRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT 300
           +VPR+ PDG +N + +QRLKDKLGNRSN+S EVEF  A G+M+GDEGRG+PTIIEMAN+T
Sbjct: 247 YVPRFSPDGGKNAVHVQRLKDKLGNRSNASGEVEFLNAYGVMIGDEGRGVPTIIEMANYT 306

Query: 301 RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV 360
           RLDC+IGSAALMR ALVQAIHHARHRSAFGR LAEQPLMR VLADLALESEAAT L +R+
Sbjct: 307 RLDCVIGSAALMRAALVQAIHHARHRSAFGRLLAEQPLMRNVLADLALESEAATALFMRL 366

Query: 361 AHAFD---APDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLY 417
           AHAF+   A   P  R W+RI+TPAAKFW+CKRTLEFTGE MEVWGGNGYVET PMAR Y
Sbjct: 367 AHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFY 426

Query: 418 REAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLA 477
           REAPVNSIWEGSGNVMCLDVLRA+ RE    A L  E  DAA     L   +  L ++L+
Sbjct: 427 REAPVNSIWEGSGNVMCLDVLRAIEREPDAAAALFDEWRDAARYSAPLADALAELTRLLS 486

Query: 478 APEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESR---SQADGGRVYGTLGSA 534
              E REA ARR+ Q++ L  Q  L+LR  PA  AQAF+ +R   + ++ GRV+GTL   
Sbjct: 487 LEPEPREACARRIAQRIALVAQASLLLRDGPAAVAQAFVATRFGNASSETGRVFGTL--P 544

Query: 535 SLAAQEAILQRAWP 548
           +     A+++RA+P
Sbjct: 545 ATIDHAALIERAFP 558


>ref|YP_331824.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 ref|ZP_02469351.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei B7210]
 ref|ZP_02496148.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 112]
 ref|ZP_04894631.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 ref|ZP_04949235.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gb|ABA47753.1| Acyl-CoA dehydrogenase [Burkholderia pseudomallei 1710b]
 gb|EDO91469.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gb|EET06254.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
          Length = 559

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/554 (63%), Positives = 421/554 (75%), Gaps = 12/554 (2%)

Query: 3   THEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELANR 62
           TH +TNQ P LS YN + +DAAL EAV+R GA W    L+  G  L + ++  +AELANR
Sbjct: 9   THRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTAPDVLALAELANR 68

Query: 63  HAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLHA 122
           HAP L TH   G RID +EFHP+WH LL +LR  GLHALP+  P  GA AAR AGYFLHA
Sbjct: 69  HAPELETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDPRPGAMAARCAGYFLHA 128

Query: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182
           Q+E+GSLCP TMTFA+I VLQ+EPALF  LR +L++REHDARD P+PQKRS+++GMGMTE
Sbjct: 129 QLESGSLCPLTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLART--ENGLSCF 240
           KQGGSDVRSN + A P+     GRG AY L GHKWFFSAP CDAHL+LART  + G+SCF
Sbjct: 189 KQGGSDVRSNETHAYPLG--AGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCF 246

Query: 241 FVPRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT 300
           +VPR+ PDG++N + +QRLKDKLGNRSN+SSEVEF  A G+M+GDEGRG+PTIIEMAN+T
Sbjct: 247 YVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYT 306

Query: 301 RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV 360
           RLDC+IGSAALMR ALVQAIHHARHRSAFGR LA+QPLMR VLADLALESEAAT+L +R+
Sbjct: 307 RLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRL 366

Query: 361 AHAFD---APDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLY 417
           AHAF+   A   P  R W+RI+TPAAKFW+CKRTLEFTGE MEVWGGNGYVET PMAR Y
Sbjct: 367 AHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFY 426

Query: 418 REAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLA 477
           REAPVNSIWEGSGNVMC+DVLRA+ RE    A L  E  DAA     L   +  L ++L+
Sbjct: 427 REAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLS 486

Query: 478 APEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESR---SQADGGRVYGTLGSA 534
              E REA ARR+ Q++ L  Q  L+LR  P   AQAF+ +R     ++ GRV+GTL   
Sbjct: 487 LEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFGTL--P 544

Query: 535 SLAAQEAILQRAWP 548
           +     A+++RA+P
Sbjct: 545 ATIDHAALVERAFP 558


>ref|ZP_01770281.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gb|EBA45086.1| acyl-CoA dehydrogenase domain protein [Burkholderia pseudomallei
           305]
          Length = 559

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/554 (63%), Positives = 421/554 (75%), Gaps = 12/554 (2%)

Query: 3   THEITNQVPDLSGYNLYRSDAALAEAVQREGAHWHDCTLASQGELLGSAEMREMAELANR 62
           TH +TNQ P LS YN + +DAAL EAV+R GA W    L+  G  L + ++  +AELANR
Sbjct: 9   THRVTNQAPPLSDYNAFETDAALVEAVRRYGASWRQTALSHDGAALTTPDVLALAELANR 68

Query: 63  HAPVLHTHDRCGRRIDVVEFHPAWHTLLDQLRRAGLHALPWMQPGDGAHAARAAGYFLHA 122
           HAP L TH   G RID +EFHP+WH LL +LR  GLHALP+  P  GA AAR AGYFLHA
Sbjct: 69  HAPELETHSPRGERIDALEFHPSWHQLLARLRAEGLHALPFSDPRPGAMAARCAGYFLHA 128

Query: 123 QIEAGSLCPTTMTFAAIAVLQQEPALFEQLRTRLFSREHDARDLPIPQKRSILIGMGMTE 182
           Q+E+GSLCP TMTFA+I VLQ+EPALF  LR +L++REHDARD P+PQKRS+++GMGMTE
Sbjct: 129 QLESGSLCPFTMTFASIPVLQREPALFATLRDKLYAREHDARDAPLPQKRSMMVGMGMTE 188

Query: 183 KQGGSDVRSNASIAMPVDPLNDGRGAAYLLSGHKWFFSAPMCDAHLMLART--ENGLSCF 240
           KQGGSDVRSN + A P+     GRG AY L GHKWFFSAP CDAHL+LART  + G+SCF
Sbjct: 189 KQGGSDVRSNETHAYPLG--AGGRGQAYRLVGHKWFFSAPQCDAHLVLARTAEQAGISCF 246

Query: 241 FVPRWLPDGARNPILIQRLKDKLGNRSNSSSEVEFEEAMGIMVGDEGRGIPTIIEMANHT 300
           +VPR+ PDG++N + +QRLKDKLGNRSN+SSEVEF  A G+M+GDEGRG+PTIIEMAN+T
Sbjct: 247 YVPRFSPDGSKNAVHVQRLKDKLGNRSNASSEVEFLNAYGVMIGDEGRGVPTIIEMANYT 306

Query: 301 RLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRAVLADLALESEAATMLMLRV 360
           RLDC+IGSAALMR ALVQAIHHARHRSAFGR LA+QPLMR VLADLALESEAAT+L +R+
Sbjct: 307 RLDCVIGSAALMRAALVQAIHHARHRSAFGRLLADQPLMRNVLADLALESEAATVLFMRL 366

Query: 361 AHAFD---APDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEVWGGNGYVETAPMARLY 417
           AHAF+   A   P  R W+RI+TPAAKFW+CKRTLEFTGE MEVWGGNGYVET PMAR Y
Sbjct: 367 AHAFEEDAAARSPQARGWRRIVTPAAKFWVCKRTLEFTGEAMEVWGGNGYVETGPMARFY 426

Query: 418 REAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAGHPALRQQVDALKQMLA 477
           REAPVNSIWEGSGNVMC+DVLRA+ RE    A L  E  DAA     L   +  L ++L+
Sbjct: 427 REAPVNSIWEGSGNVMCIDVLRAIEREPDAAAALFDEWRDAARHSAPLAGALAELTRLLS 486

Query: 478 APEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESR---SQADGGRVYGTLGSA 534
              E REA ARR+ Q++ L  Q  L+LR  P   AQAF+ +R     ++ GRV+GTL   
Sbjct: 487 LEPEPREACARRIAQRIALVAQASLLLRDGPYAVAQAFVATRFGHDSSETGRVFGTL--P 544

Query: 535 SLAAQEAILQRAWP 548
           +     A+++RA+P
Sbjct: 545 ATIDHAALVERAFP 558