BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0087.p (188 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776885.1| TetR family transcription regulator protein ... 359 1e-97 ref|YP_004236166.1| regulatory protein TetR [Acidovorax avenae s... 264 5e-69 ref|YP_002238873.1| transcriptional regulator TetR family [Klebs... 256 1e-66 ref|YP_003439860.1| regulatory protein TetR [Klebsiella variicol... 254 4e-66 ref|YP_001335021.1| putative regulatory protein TetR [Klebsiella... 244 3e-63 ref|YP_002919179.1| putative TetR-family trancriptional regulato... 243 1e-62 ref|ZP_06549198.1| TetR family transcriptional regulator [Klebsi... 243 1e-62 gb|AEJ97891.1| putative TetR-family trancriptional regulatory pr... 240 8e-62 ref|ZP_06914589.1| TetR family transcriptional regulator [Strept... 228 2e-58 ref|YP_001682070.1| TetR family transcriptional regulator [Caulo... 223 7e-57 >ref|YP_003776885.1| TetR family transcription regulator protein [Herbaspirillum seropedicae SmR1] emb|CAM32582.1| TetR family transcription regulator protein [Herbaspirillum seropedicae] gb|ADJ64977.1| TetR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 188 Score = 359 bits (921), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 182/188 (96%), Positives = 184/188 (97%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS Sbjct: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 SFEALA+RAD LQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVS IEDHESALHASCVS Sbjct: 61 SFEALAERADELQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSVIEDHESALHASCVS 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIF IISGAVLN Sbjct: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFGIISGAVLN 180 Query: 181 PGKAIARR 188 GK+IARR Sbjct: 181 TGKSIARR 188 >ref|YP_004236166.1| regulatory protein TetR [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47599.1| regulatory protein TetR [Acidovorax avenae subsp. avenae ATCC 19860] Length = 196 Score = 264 bits (675), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 137/193 (70%), Positives = 157/193 (81%), Gaps = 5/193 (2%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MR DA+KNY LL+VAR E G++ASLRDIARRAEVGLGTLYRHFPTREALLEALLR+ Sbjct: 1 MRIDAQKNYQRLLHVAREALAETGAEASLRDIARRAEVGLGTLYRHFPTREALLEALLRN 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 FE LA RADAL A AL+ WL+EIIAFTH RGVIAPM+SAIED SALHASCV Sbjct: 61 DFEDLATRADALCTAAAPDQALLAWLREIIAFTHRQRGVIAPMMSAIEDESSALHASCVR 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVL- 179 LR+AGAALL+RAQADGKARAD+DG ELFDLIAALAWLR+QPSHA R++R+ I+SGA+L Sbjct: 121 LRSAGAALLARAQADGKARADMDGDELFDLIAALAWLRDQPSHAGRSERMLEIVSGAILA 180 Query: 180 ----NPGKAIARR 188 P ++ AR+ Sbjct: 181 QPATPPTRSPARK 193 >ref|YP_002238873.1| transcriptional regulator TetR family [Klebsiella pneumoniae 342] gb|ACI06917.1| transcriptional regulator, TetR family [Klebsiella pneumoniae 342] Length = 182 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 125/182 (68%), Positives = 155/182 (85%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADA+KNYD L++VAR VF+EQG++ASLRDIARRA VG+GTLYRHFP R++LLEALLRS Sbjct: 1 MRADARKNYDLLIDVAREVFVEQGAEASLRDIARRAGVGMGTLYRHFPNRDSLLEALLRS 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 F AL RA++L D AAAL+EWL E +AFTH+HRG+IAP++SAI+D ESALH++CV+ Sbjct: 61 RFAALTARAESLLLVADPAAALLEWLAESVAFTHQHRGIIAPLMSAIDDPESALHSACVA 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 LRAAG +LL+RAQ G+AR DL G ELFDLIAALAWLREQPSHA RA+RI ++++ A+L Sbjct: 121 LRAAGTSLLTRAQQAGQARPDLSGDELFDLIAALAWLREQPSHAPRAERILAVLADAILT 180 Query: 181 PG 182 G Sbjct: 181 AG 182 >ref|YP_003439860.1| regulatory protein TetR [Klebsiella variicola At-22] gb|ADC58828.1| regulatory protein TetR [Klebsiella variicola At-22] Length = 182 Score = 254 bits (649), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 124/180 (68%), Positives = 154/180 (85%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADA+KNYD L++VAR VF+EQG++ASLRDIARRA VG+GTLYRHFP R++LLEALLRS Sbjct: 1 MRADARKNYDLLIDVARDVFVEQGAEASLRDIARRAGVGMGTLYRHFPNRDSLLEALLRS 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 F AL RA++L D AAAL+EWL E +AFTH+HRG+IAP++SAI+D ESALH++CV+ Sbjct: 61 RFAALTARAESLLLVADPAAALLEWLAESVAFTHQHRGIIAPLMSAIDDPESALHSACVA 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 LRAAG +LL+RAQ G+AR DL G ELFDLIAALAWLREQPSHA RA+RI ++++ A+L Sbjct: 121 LRAAGTSLLTRAQQAGQARPDLSGDELFDLIAALAWLREQPSHAPRAERILAVLADAILT 180 >ref|YP_001335021.1| putative regulatory protein TetR [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gb|ABR76791.1| putative bacterial regulatory protein, TetR [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 182 Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 126/182 (69%), Positives = 155/182 (85%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADA+KNYD L+ VAR VF+EQG++ASLRDIARRA +G+GTLYRHFP R++LLEALLRS Sbjct: 1 MRADARKNYDLLIEVARDVFVEQGAEASLRDIARRAGLGMGTLYRHFPNRDSLLEALLRS 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 F AL RA++L A D AAAL+EWL E +AFTH+HRG+IAP++SAI+DHESALH++CV+ Sbjct: 61 RFAALTARAESLLLAADPAAALLEWLAESVAFTHQHRGIIAPLMSAIDDHESALHSACVA 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 LRAAG +LL+RAQ G AR DL G ELFDLIAALAWLREQPSHA RA+RI ++++ A+L Sbjct: 121 LRAAGTSLLTRAQQAGLARPDLSGEELFDLIAALAWLREQPSHAPRAERILAVLADAILT 180 Query: 181 PG 182 G Sbjct: 181 AG 182 >ref|YP_002919179.1| putative TetR-family trancriptional regulatory protein [Klebsiella pneumoniae NTUH-K2044] ref|ZP_08307999.1| transcriptional regulator, TetR family [Klebsiella sp. MS 92-3] dbj|BAH63112.1| putative TetR-family trancriptional regulatory protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gb|EGF59384.1| transcriptional regulator, TetR family [Klebsiella sp. MS 92-3] Length = 182 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 126/182 (69%), Positives = 154/182 (84%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADA+KNYD L+ VAR VF+EQG++ASLRDIARRA VG+GTLYRHFP R++LLEALLRS Sbjct: 1 MRADARKNYDLLIEVARDVFVEQGAEASLRDIARRAGVGMGTLYRHFPNRDSLLEALLRS 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 F AL RA++L A D AAAL+EWL E +AFTH+HRG+IAP++SAI+D ESALH++CV+ Sbjct: 61 RFAALTARAESLLLAADPAAALLEWLAESVAFTHQHRGIIAPLMSAIDDPESALHSACVA 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 LRAAG +LL+RAQ G AR DL G ELFDLIAALAWLREQPSHA RA+RI ++++ A+L Sbjct: 121 LRAAGTSLLTRAQQAGLARPDLSGEELFDLIAALAWLREQPSHAPRAERILAVLADAILT 180 Query: 181 PG 182 G Sbjct: 181 AG 182 >ref|ZP_06549198.1| TetR family transcriptional regulator [Klebsiella sp. 1_1_55] gb|EFD87218.1| TetR family transcriptional regulator [Klebsiella sp. 1_1_55] Length = 182 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 125/182 (68%), Positives = 154/182 (84%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADA+KNYD L+ VAR VF+EQG++ASLRDIARRA VG+GTLYRHFP R++LLEALLRS Sbjct: 1 MRADARKNYDLLIEVARDVFVEQGAEASLRDIARRAGVGMGTLYRHFPNRDSLLEALLRS 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 F L RA++L A D AAAL+EWL E +AFTH+HRG+IAP++SAI+D ESALH++CV+ Sbjct: 61 RFATLTARAESLLLAADPAAALLEWLAESVAFTHQHRGIIAPLMSAIDDPESALHSACVA 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 LRAAG +LL+RAQ G+AR DL G ELFDLIAALAWLREQPSHA RA+RI ++++ A+L Sbjct: 121 LRAAGTSLLTRAQQAGQARPDLSGDELFDLIAALAWLREQPSHAPRAERILAVLADAILT 180 Query: 181 PG 182 G Sbjct: 181 AG 182 >gb|AEJ97891.1| putative TetR-family trancriptional regulatory protein [Klebsiella pneumoniae KCTC 2242] Length = 182 Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 125/182 (68%), Positives = 153/182 (84%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADA+KNYD L+ VAR VF+EQG++ASLRDIARRA VG+GTLYRHFP R++LLEALLRS Sbjct: 1 MRADARKNYDLLIEVARDVFVEQGAEASLRDIARRAGVGMGTLYRHFPNRDSLLEALLRS 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 F AL RA++L A D AAAL+EWL E +AF H+HRG+IAP++SAI+D ESALH++CV+ Sbjct: 61 RFAALTARAESLLLAADPAAALLEWLAESVAFAHQHRGIIAPLMSAIDDPESALHSACVA 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 LRAAG +LL+RAQ G AR DL G ELFDLIAALAWLREQPSHA RA+RI ++++ A+L Sbjct: 121 LRAAGTSLLTRAQQAGLARPDLSGEELFDLIAALAWLREQPSHAPRAERILAVLADAILT 180 Query: 181 PG 182 G Sbjct: 181 AG 182 >ref|ZP_06914589.1| TetR family transcriptional regulator [Streptomyces sviceus ATCC 29083] gb|EFH28237.1| TetR family transcriptional regulator [Streptomyces sviceus ATCC 29083] Length = 183 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 114/183 (62%), Positives = 142/183 (77%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADA+KN+DHLL VA V EQG DASLRDIARRAEVGL TL RHFPTREALLEALLR+ Sbjct: 1 MRADARKNHDHLLAVAGAVITEQGVDASLRDIARRAEVGLATLIRHFPTREALLEALLRT 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 SF+ LA +A AL+ + + AL WL++ +A H +RGV+A MV+AIED +SALHASCV+ Sbjct: 61 SFDELAVKAAALETSKEPDDALASWLRDFVACAHNYRGVVALMVTAIEDPQSALHASCVA 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 +RAAG LL+RAQA G AR D+DG +LF L +LAWL +QPS A+R D +F ++ A+L Sbjct: 121 MRAAGTQLLTRAQAQGLARTDIDGTDLFALAGSLAWLSDQPSLAARTDHLFDVVVSAILR 180 Query: 181 PGK 183 PG+ Sbjct: 181 PGE 183 >ref|YP_001682070.1| TetR family transcriptional regulator [Caulobacter sp. K31] gb|ABZ69572.1| transcriptional regulator, TetR family [Caulobacter sp. K31] Length = 184 Score = 223 bits (569), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 114/183 (62%), Positives = 139/183 (75%) Query: 1 MRADAKKNYDHLLNVARTVFMEQGSDASLRDIARRAEVGLGTLYRHFPTREALLEALLRS 60 MRADA+KNYDHLL VAR V E+G+DASLRDIAR+A VGLGTLYRHFP+REALL+ALLR+ Sbjct: 1 MRADARKNYDHLLVVAREVITERGADASLRDIARKAGVGLGTLYRHFPSREALLDALLRA 60 Query: 61 SFEALAKRADALQAADDSAAALMEWLQEIIAFTHEHRGVIAPMVSAIEDHESALHASCVS 120 F+ L RA L+ + + AL WL E +A H + G I MV+AI D ESAL+ASC + Sbjct: 61 GFDGLTVRASELEGSTSAQEALTSWLHEAVAVAHNYSGAIESMVAAIADPESALYASCHT 120 Query: 121 LRAAGAALLSRAQADGKARADLDGAELFDLIAALAWLREQPSHASRADRIFSIISGAVLN 180 +RAAG LL RAQA+GKARADLDG +LF L+ ALAWLR+QPS A RAD +F +I+ A+L Sbjct: 121 MRAAGTHLLIRAQAEGKARADLDGTDLFALLGALAWLRDQPSLAPRADHLFEVIANAILV 180 Query: 181 PGK 183 K Sbjct: 181 KDK 183