BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0076.p (266 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776896.1| hypothetical protein Hsero_3509 [Herbaspiril... 522 e-146 ref|YP_003817735.1| hypothetical protein Bresu_0798 [Brevundimon... 114 1e-23 ref|YP_002540214.1| Conserved Hypothetical Protein mll2483 [Agro... 112 6e-23 ref|NP_103819.1| hypothetical protein mll2483 [Mesorhizobium lot... 107 2e-21 ref|YP_768679.1| hypothetical protein RL3100 [Rhizobium legumino... 107 2e-21 ref|YP_002551135.1| hypothetical protein Avi_4307 [Agrobacterium... 104 2e-20 ref|ZP_08268978.1| hypothetical protein BDIM_23390 [Brevundimona... 103 2e-20 ref|YP_001686127.1| hypothetical protein Caul_4509 [Caulobacter ... 103 2e-20 ref|YP_004087401.1| hypothetical protein Astex_1584 [Asticcacaul... 102 7e-20 ref|YP_003591418.1| hypothetical protein Cseg_0280 [Caulobacter ... 98 2e-18 >ref|YP_003776896.1| hypothetical protein Hsero_3509 [Herbaspirillum seropedicae SmR1] gb|ADJ64988.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 263/266 (98%), Positives = 264/266 (99%) Query: 1 LHGAAPSEIDDILADYRNHFDESSASGRSEEATAAALGDPIWLGREHLADLRDEAGGWLG 60 LHGAAPSEIDDILADYRNHFDESSASGRSEEATAAALGDP+WLGREHLADLRDEAGGWLG Sbjct: 14 LHGAAPSEIDDILADYRNHFDESSASGRSEEATAAALGDPVWLGREHLADLRDEAGGWLG 73 Query: 61 AVKRFWTGMRQRRQRVGDNTERELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPAWLIE 120 AVKRFWTGMRQRRQRVGDNTERELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPAWLIE Sbjct: 74 AVKRFWTGMRQRRQRVGDNTERELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPAWLIE 133 Query: 121 HVRLDGQQLRGRFKWRLFHSNHLRLELEGPAIETWSTVGSADLRLLNVSQAALRLELCGS 180 HVRLD QQLRGRFKWRLFHSNHLRLELEGPAIETWSTVGSADLRLLNVSQAALRLELCGS Sbjct: 134 HVRLDSQQLRGRFKWRLFHSNHLRLELEGPAIETWSTVGSADLRLLNVSQAALRLELCGS 193 Query: 181 GDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEAGLSLQGSGDI 240 GDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEA LSLQGSGDI Sbjct: 194 GDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEADLSLQGSGDI 253 Query: 241 TLLTRPTTIRTHVLGSGDIRMEGGWR 266 TLLTRPTTIRTHVLGSGDIRMEGGWR Sbjct: 254 TLLTRPTTIRTHVLGSGDIRMEGGWR 279 >ref|YP_003817735.1| hypothetical protein Bresu_0798 [Brevundimonas subvibrioides ATCC 15264] gb|ADL00112.1| Protein of unknown function DUF2807 [Brevundimonas subvibrioides ATCC 15264] Length = 262 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 31/221 (14%) Query: 68 GMRQRRQRVGDN----TERELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPAWLIEHVR 123 G R QR D R++AW G + I L A+V + + A + GPA L+E VR Sbjct: 45 GDTVRFQRADDTRTPEITRQIAWTGGDTLTIDLAADVDYVQGDTAGVTVTGPADLVEKVR 104 Query: 124 LDGQQLRGRFKWR------------LF-----------HSNHLRLELEGPAIETWSTVGS 160 L + GR W +F HS + + + P + T++ GS Sbjct: 105 L----VDGRLTWTADDADGPNHETVVFGRNRDGHGMWAHSEAVHIVVTAPNVSTFNLEGS 160 Query: 161 ADLRLLNVSQAALRLELCGSGDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSG 220 ADL L + Q L +++ GSG++ +GR + + ++ GSG+ DL+ L A V + GSG Sbjct: 161 ADLTLKDYDQDTLAVDISGSGEVWASGRVRALELDISGSGDADLAGLSATDANVAIAGSG 220 Query: 221 EVKLGPSEEAGLSLQGSGDITLLTRPTTIRTHVLGSGDIRM 261 + + P+ A +S+ GSGD+ + TRP T+ +V GSGD+ + Sbjct: 221 DATVAPTGRADISISGSGDVDVTTRPATVNQNVSGSGDVSV 261 >ref|YP_002540214.1| Conserved Hypothetical Protein mll2483 [Agrobacterium radiobacter K84] gb|ACM28619.1| Conserved Hypothetical Protein mll2483 [Agrobacterium radiobacter K84] Length = 231 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 1/170 (0%) Query: 91 RMVIRLPAEVSWRPAEQARAVLRGPAWLIEHVRLDGQQLRGRFKWRLFHSNHLRLELEGP 150 R+VI LPA V ++P ++A A++ G L++HVR++G +L S L + L GP Sbjct: 60 RLVINLPASVRYQPGDKAEAIISGDPALLDHVRMEGGKLSLDCDPGWIES-RLDVSLSGP 118 Query: 151 AIETWSTVGSADLRLLNVSQAALRLELCGSGDIRVAGRAQHVTANVMGSGEIDLSLLEHL 210 AI W +GS +L L ++Q LRL + GSG + G A V ++ GSG L L Sbjct: 119 AIADWKLLGSGNLTLSQINQPLLRLSIRGSGSVAATGAADTVDLDISGSGAARLKNLTAK 178 Query: 211 RATVKVVGSGEVKLGPSEEAGLSLQGSGDITLLTRPTTIRTHVLGSGDIR 260 A +KV GSG+V+L +A +S+ GSG++ L RP R+ + GSG IR Sbjct: 179 SAEIKVRGSGDVQLAAQADADVSISGSGNVELFGRPILRRSEIRGSGRIR 228 >ref|NP_103819.1| hypothetical protein mll2483 [Mesorhizobium loti MAFF303099] dbj|BAB49605.1| mll2483 [Mesorhizobium loti MAFF303099] Length = 235 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/179 (37%), Positives = 96/179 (53%), Gaps = 1/179 (0%) Query: 81 ERELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPAWLIEHVRLDGQQLRGRFKWRLFHS 140 E L + I LPA V ++P ++A AV+ G + LI+HVR++G QL + F S Sbjct: 54 EVTLPFSANDSFTIALPASVRYQPGDKAEAVVSGDSTLIDHVRMEGSQLSLDCETGWF-S 112 Query: 141 NHLRLELEGPAIETWSTVGSADLRLLNVSQAALRLELCGSGDIRVAGRAQHVTANVMGSG 200 L + + GP I W VGS +L L V+Q LRL + GSG + G Q V + GSG Sbjct: 113 PRLDVTVSGPVISDWRLVGSGELALPQVNQRELRLNIRGSGSVVATGTTQTVDLEISGSG 172 Query: 201 EIDLSLLEHLRATVKVVGSGEVKLGPSEEAGLSLQGSGDITLLTRPTTIRTHVLGSGDI 259 L L A V++ GSG+ ++ +A +S+ GSGD+ L PT R+ V GSG I Sbjct: 173 SGRLKDLIAQSAQVEIRGSGDAEVTAQADADVSISGSGDVDLYGHPTMRRSQVRGSGSI 231 >ref|YP_768679.1| hypothetical protein RL3100 [Rhizobium leguminosarum bv. viciae 3841] emb|CAK08586.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 234 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 2/203 (0%) Query: 57 GWLGAVKRFWTGMRQRRQRVGDNTERELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPA 116 GW A W G G + L +I G R+VI LP + +RP E+A V+ G + Sbjct: 30 GWASAA-YLWKGGSTCEPASGTQQQITLPFIAGDRLVIDLPGSIHYRPGEKAEIVVSGDS 88 Query: 117 WLIEHVRLDGQQLRGRFKWRLFHSNHLRLELEGPAIETWSTVGSADLRLLNVSQAALRLE 176 L+ H+R++ +L G + ++ L ++L GPAI W +G++DL L ++Q L++ Sbjct: 89 ALLSHLRIESGRL-GLGCAPGWSASQLDVKLSGPAITRWDLLGNSDLTLSQINQPELQVN 147 Query: 177 LCGSGDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEAGLSLQG 236 + GSG+ G A V ++ GSGE L A VK+ GSG+ K+ +A +S+ G Sbjct: 148 IKGSGNSSATGIADAVNLSISGSGEARFEGLTAQSARVKIRGSGDAKVTAKVDADVSISG 207 Query: 237 SGDITLLTRPTTIRTHVLGSGDI 259 SG++ L P R + GSG I Sbjct: 208 SGNVELSGHPAMRRAEIKGSGRI 230 >ref|YP_002551135.1| hypothetical protein Avi_4307 [Agrobacterium vitis S4] gb|ACM38123.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 235 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 6/203 (2%) Query: 60 GAVKRFWTGMRQRRQRVGDNTER-ELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPAWL 118 G ++ W V +++ L + + I LPA V ++P ++A ++ G L Sbjct: 32 GGARQLWATTSSTCGSVQSTSQQVTLPFTASDSLTIDLPASVRYQPGDKAEVIVSGDPTL 91 Query: 119 IEHVRLDGQQLR--GRFKWRLFHSNHLRLELEGPAIETWSTVGSADLRLLNVSQAALRLE 176 + HVR+DG +L W + L + + GPAI W +GS +L L +++Q LRL+ Sbjct: 92 VGHVRMDGHRLSLDCHLGWS---QSKLDISVSGPAITDWKLLGSGNLSLSHINQPQLRLD 148 Query: 177 LCGSGDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEAGLSLQG 236 + GSG++ G A V ++ GSG L L A + ++GSG + ++A +S+ G Sbjct: 149 IKGSGNVSATGAADTVDVDISGSGTAQLRRLTAQSARIVILGSGNADMTALKDADVSISG 208 Query: 237 SGDITLLTRPTTIRTHVLGSGDI 259 SG++ L PT R+ + GSG I Sbjct: 209 SGNVDLSGHPTLRRSEINGSGRI 231 >ref|ZP_08268978.1| hypothetical protein BDIM_23390 [Brevundimonas diminuta ATCC 11568] gb|EGF95500.1| hypothetical protein BDIM_23390 [Brevundimonas diminuta ATCC 11568] Length = 259 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 16/209 (7%) Query: 67 TGMRQRRQRVGDNTERELAWIPGSRMVIRLPAEVSW-RPAEQARAVLRGPAWLIEHVRLD 125 +G R +V +T R + W G R+ I +PA+V + + A+ + G ++E VR Sbjct: 48 SGFTVERGQVSPDTTRTIEWTGGDRLAINIPADVVYDQQADTPGITVSGAQSVVERVRFS 107 Query: 126 GQQL---------RGRFKWRLF------HSNHLRLELEGPAIETWSTVGSADLRLLNVSQ 170 +L R +W ++ L++ ++ P+++ + G +L++ Q Sbjct: 108 NGRLTLDEAPRGDRSYVRWTRTGIRGWSETDALKIIIKAPSVKAFDLSGPTELKIRGYDQ 167 Query: 171 AALRLELCGSGDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEA 230 +L L L GS D+RV GR VT +V G+G+ + L A V+V GSGEV++GPS +A Sbjct: 168 PSLDLTLTGSSDVRVQGRTDAVTVDVSGAGDARMDELIVDDAKVRVSGSGEVRVGPSGKA 227 Query: 231 GLSLQGSGDITLLTRPTTIRTHVLGSGDI 259 + + GSG++ L RP +R V GSG++ Sbjct: 228 EVDVSGSGEVRLTRRPAELRQSVSGSGEV 256 >ref|YP_001686127.1| hypothetical protein Caul_4509 [Caulobacter sp. K31] gb|ABZ73629.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 270 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 19/204 (9%) Query: 78 DNTERELAWIPGSRMVIRLPAEVSWR---PAEQARAVLRGPAWLIEHVRL-DGQ------ 127 + T R++AW G + + +PAEV + P A + GP L++ V + DG+ Sbjct: 66 ETTTRQIAWKGGDSLQVDVPAEVIFTQAAPGAGAGVKITGPKRLVDRVMIEDGRISLKGD 125 Query: 128 ---------QLRGRFKWRLFHSNHLRLELEGPAIETWSTVGSADLRLLNVSQAALRLELC 178 ++ G L + L +E+ PA+ +++ GS DL L Q LRLE+ Sbjct: 126 GDYDGTNSLKINGHGVQVLGGEDRLSIEVTAPAVRSFTLNGSGDLYLKAYDQPDLRLEIN 185 Query: 179 GSGDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEAGLSLQGSG 238 GSG I G+A V V GSGE DL L+ A V V GSGE + P A + L GSG Sbjct: 186 GSGAIDAQGKAGKVDLQVSGSGEADLRSLDTGDAQVVVSGSGEAHVAPHGAAEVELAGSG 245 Query: 239 DITLLTRPTTIRTHVLGSGDIRME 262 D+ L ++PT + ++V GSG++ + Sbjct: 246 DVYLTSKPTVLTSNVAGSGEVHQD 269 >ref|YP_004087401.1| hypothetical protein Astex_1584 [Asticcacaulis excentricus CB 48] gb|ADU13250.1| hypothetical protein Astex_1584 [Asticcacaulis excentricus CB 48] Length = 260 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 15/209 (7%) Query: 69 MRQRRQRVGDNTERELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPAWLIEHVRL---- 124 M+ + + R L W ++ I +PAEV + + GP L + VRL Sbjct: 52 MKTTKTEIAPTVTRTLVWSGSEQLKIEVPAEVVYTQGATPSVTVNGPKALTDRVRLENGR 111 Query: 125 ----DGQQLRGRFKWRL-------FHSNHLRLELEGPAIETWSTVGSADLRLLNVSQAAL 173 DG + ++R S+ L++ + P+++ + GS DLR+ Q + Sbjct: 112 LYLADGADVEKVVQFRFGPGHIEAHASDELKIVITAPSVKDFEISGSGDLRVSAYDQPTI 171 Query: 174 RLELCGSGDIRVAGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEAGLS 233 L + GSG V G+A+ + ++ G+GE DLS L A V + GSG+ + P+ + + Sbjct: 172 DLRISGSGSAEVTGKAKALKLDITGAGEADLSGLSVEDADVSISGSGDATIAPTGKVKVD 231 Query: 234 LQGSGDITLLTRPTTIRTHVLGSGDIRME 262 + GSG++ L TRP + T + G+G + + Sbjct: 232 VSGSGNVDLQTRPAQLDTRISGAGSVEQD 260 >ref|YP_003591418.1| hypothetical protein Cseg_0280 [Caulobacter segnis ATCC 21756] gb|ADG08800.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756] Length = 271 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 15/197 (7%) Query: 81 ERELAWIPGSRMVIRLPAEVSWRPAEQARAVLRGPAWLIEHVRLDGQQLRGRFKWRLFH- 139 +R AW + ++I LP +V + +A+ V GP IE +R+DG +L + H Sbjct: 74 DRAFAWTGKNDLIIDLPVDVVFIQGPEAKIVASGPKDYIERLRVDGGRLTLEGNDDVDHD 133 Query: 140 --------------SNHLRLELEGPAIETWSTVGSADLRLLNVSQAALRLELCGSGDIRV 185 S +++ + P + + GS DL + R+ + GSGD+ Sbjct: 134 RLTIDAMGLRVESDSERVKITVIAPDVTQFDVRGSGDLDIRRYDHPTFRVTVSGSGDVEA 193 Query: 186 AGRAQHVTANVMGSGEIDLSLLEHLRATVKVVGSGEVKLGPSEEAGLSLQGSGDITLLTR 245 AGR + + + GSG +DL L+ A V V GSG + + +A +++ GSGD+ L T Sbjct: 194 AGRVEMASIDNSGSGHVDLGDLKAKEAVVDVSGSGGGAIFATAKAKIAISGSGDVELRTE 253 Query: 246 PTTIRTHVLGSGDIRME 262 P + + V GSG+IR E Sbjct: 254 PKAVSSEVTGSGEIRRE 270