BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0027.p (487 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776951.1| cytoplasmic axial filament ribonuclease G pr... 999 0.0 ref|ZP_08275491.1| Ribonuclease E [Oxalobacteraceae bacterium IM... 892 0.0 ref|YP_004751701.1| cytoplasmic axial filament protein CafA and ... 877 0.0 ref|YP_001098884.1| RNase G [Herminiimonas arsenicoxydans] >gi|1... 870 0.0 ref|YP_001352227.1| ribonuclease G (RNAse G) (cytoplasmic axial ... 868 0.0 ref|ZP_02882889.1| ribonuclease, Rne/Rng family [Burkholderia gr... 768 0.0 ref|YP_001894933.1| Rne/Rng family ribonuclease [Burkholderia ph... 766 0.0 ref|YP_003907614.1| ribonuclease, Rne/Rng family [Burkholderia s... 766 0.0 ref|ZP_06843394.1| ribonuclease, Rne/Rng family [Burkholderia sp... 766 0.0 ref|YP_004227538.1| Rne/Rng family ribonuclease [Burkholderia sp... 766 0.0 >ref|YP_003776951.1| cytoplasmic axial filament ribonuclease G protein [Herbaspirillum seropedicae SmR1] gb|ADJ65043.1| cytoplasmic axial filament ribonuclease G protein [Herbaspirillum seropedicae SmR1] Length = 487 Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/487 (100%), Positives = 487/487 (100%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI Sbjct: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEARSHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIWEARSHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWEARSHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDADL 180 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDADL Sbjct: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDADL 180 Query: 181 QMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFHML 240 QMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFHML Sbjct: 181 QMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFHML 240 Query: 241 QEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 QEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT Sbjct: 241 QEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAVLA 360 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAVLA Sbjct: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAVLA 360 Query: 361 ELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 ELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY Sbjct: 361 ELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQQE 480 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQQE Sbjct: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQQE 480 Query: 481 QYDIILM 487 QYDIILM Sbjct: 481 QYDIILM 487 >ref|ZP_08275491.1| Ribonuclease E [Oxalobacteraceae bacterium IMCC9480] gb|EGF31035.1| Ribonuclease E [Oxalobacteraceae bacterium IMCC9480] Length = 487 Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/487 (88%), Positives = 456/487 (93%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 M+EDILINITPQETRVALILQGAVQELHIERTLSRG+AGNIYLGKV RVLPGMQSAFIDI Sbjct: 1 MNEDILINITPQETRVALILQGAVQELHIERTLSRGMAGNIYLGKVARVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEARSHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIWEARSHDG TPA+PIEKLL DG +ITVQVIKDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWEARSHDGPATPALPIEKLLFDGMAITVQVIKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDADL 180 IAGRMLVYLPQD HIGISQRIE E+ERE LR KVQ LLPPEEKGGFIIRTMAEDAS+ADL Sbjct: 121 IAGRMLVYLPQDSHIGISQRIEKESEREALRGKVQKLLPPEEKGGFIIRTMAEDASEADL 180 Query: 181 QMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFHML 240 QMD++YLRKTW+TI K+ P +LLHQDLSLAQRVLRDFVGD T+TIQVDSRENF ML Sbjct: 181 QMDIDYLRKTWSTIAASAKSKPPTSLLHQDLSLAQRVLRDFVGDDTSTIQVDSRENFLML 240 Query: 241 QEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 Q+FG YTPSVLT+L+HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQTEAMTT Sbjct: 241 QQFGTSYTPSVLTRLSHYTGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAVLA 360 IDVNTGS+VNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDME+ EHR +VL+ Sbjct: 301 IDVNTGSYVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENAEHRASVLS 360 Query: 361 ELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 EL KAL RDRTK+SVSGFS LGLVEMTRKRTRESLA ILCETCPAC GRGQVKT RT+CY Sbjct: 361 ELHKALARDRTKMSVSGFSALGLVEMTRKRTRESLARILCETCPACSGRGQVKTARTICY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQQE 480 EILRE++REAKQFNPREFRILASQ+VVDMFLEEESQHLAMLGDFIGKPISLQV++ YQQE Sbjct: 421 EILRELLREAKQFNPREFRILASQIVVDMFLEEESQHLAMLGDFIGKPISLQVETVYQQE 480 Query: 481 QYDIILM 487 QYDIILM Sbjct: 481 QYDIILM 487 >ref|YP_004751701.1| cytoplasmic axial filament protein CafA and ribonuclease G [Collimonas fungivorans Ter331] gb|AEK60878.1| Cytoplasmic axial filament protein CafA and Ribonuclease G [Collimonas fungivorans Ter331] Length = 487 Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/487 (87%), Positives = 447/487 (91%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 MSEDIL+NITPQETRVALI QGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI Sbjct: 1 MSEDILVNITPQETRVALIFQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEARSHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIWE R+HDGQ PIEK+L DGQS+TVQV+KDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWETRAHDGQAAQQTPIEKMLFDGQSLTVQVVKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDADL 180 IAGRMLVYLPQD+HIGISQRIENEAERELL+ KVQ LLPPEEKGGFIIRTMAEDAS+ADL Sbjct: 121 IAGRMLVYLPQDRHIGISQRIENEAERELLKDKVQKLLPPEEKGGFIIRTMAEDASEADL 180 Query: 181 QMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFHML 240 QMD+EYLRKTW++I + K+ PAPTLLHQDLSLAQRVLRDFV D T TIQVDSRENF L Sbjct: 181 QMDIEYLRKTWSSITQLAKSKPAPTLLHQDLSLAQRVLRDFVNDETTTIQVDSRENFQKL 240 Query: 241 QEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 QEF A YTPSV +LTHY GERPLFDLYGVEEEI+ AL RRV LKSGGYLIVDQTEAMTT Sbjct: 241 QEFAATYTPSVTARLTHYTGERPLFDLYGVEEEIQEALSRRVPLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAVLA 360 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDME+ EH+ AVLA Sbjct: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMENGEHKSAVLA 360 Query: 361 ELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 EL KAL RDRTK SVS FS LGLVEMTRKRTRESLAHILCE CPAC G+GQVKT RT+CY Sbjct: 361 ELHKALLRDRTKKSVSEFSALGLVEMTRKRTRESLAHILCEPCPACNGKGQVKTARTICY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQQE 480 EILREV+REAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFI KPISLQV++ Y QE Sbjct: 421 EILREVLREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIRKPISLQVETVYPQE 480 Query: 481 QYDIILM 487 QYDIILM Sbjct: 481 QYDIILM 487 >ref|YP_001098884.1| RNase G [Herminiimonas arsenicoxydans] emb|CAL60757.1| RNase G (ribonuclease G) [Herminiimonas arsenicoxydans] Length = 487 Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/487 (85%), Positives = 450/487 (92%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 MSEDIL+N+TPQETRVAL+LQGAVQELHIERTLSRG+AGNIYLGKVVRVLPGMQSAFIDI Sbjct: 1 MSEDILVNVTPQETRVALVLQGAVQELHIERTLSRGMAGNIYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEARSHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIW+ARSHDG T IPIE++L DGQSITVQVIKDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWDARSHDGLPTTPIPIERILFDGQSITVQVIKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDADL 180 IAGRMLVYLPQ+ HIGISQRIENE ERELLR KVQ L+ EKGGFIIRTMAEDASD DL Sbjct: 121 IAGRMLVYLPQESHIGISQRIENEVERELLREKVQKLMQEGEKGGFIIRTMAEDASDHDL 180 Query: 181 QMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFHML 240 QMDV+YLRKTW+ I + KT PAP+LL+QDL LAQRV+RDFV D TA+IQVDSRENF L Sbjct: 181 QMDVDYLRKTWSNITQLAKTKPAPSLLYQDLDLAQRVMRDFVNDETASIQVDSRENFQKL 240 Query: 241 QEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 Q+FG +YTPSVLTKL HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQTEAMTT Sbjct: 241 QQFGELYTPSVLTKLAHYPGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAVLA 360 IDVNTGSFVNGRNFDDTIFKTNLEA+HAIARQLRLRNLGG++ILDFIDME+ EHR AVL+ Sbjct: 301 IDVNTGSFVNGRNFDDTIFKTNLEASHAIARQLRLRNLGGMVILDFIDMENVEHRNAVLS 360 Query: 361 ELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 EL +AL RDRTK+SVSGFS LGLVEMTRKRTRESLAHILCE CPAC G+GQVKT RT+CY Sbjct: 361 ELNRALARDRTKVSVSGFSALGLVEMTRKRTRESLAHILCEPCPACGGKGQVKTARTICY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQQE 480 EILRE+ REAKQFNPREFRILASQVV+DMFLEEESQHLAMLGDF+GKPISLQV++ Y QE Sbjct: 421 EILRELTREAKQFNPREFRILASQVVIDMFLEEESQHLAMLGDFLGKPISLQVEAVYHQE 480 Query: 481 QYDIILM 487 QYD+ILM Sbjct: 481 QYDVILM 487 >ref|YP_001352227.1| ribonuclease G (RNAse G) (cytoplasmic axial filament protein) [Janthinobacterium sp. Marseille] gb|ABR89103.1| ribonuclease G (RNAse G) (cytoplasmic axial filament protein) [Janthinobacterium sp. Marseille] Length = 487 Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/487 (84%), Positives = 450/487 (92%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 MSEDIL+N+TPQETRVAL+LQGAVQELH+ERTLSRG+AGNIYLGKVVRVLPGMQSAF+DI Sbjct: 1 MSEDILVNVTPQETRVALVLQGAVQELHVERTLSRGMAGNIYLGKVVRVLPGMQSAFVDI 60 Query: 61 GLERAAFLHVADIWEARSHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQIS 120 GLERAAFLHVADIW+ARSH+G + PIE++L+DGQ++TVQVIKDPIGTKGARLSTQIS Sbjct: 61 GLERAAFLHVADIWDARSHEGPPSSPTPIERVLYDGQAVTVQVIKDPIGTKGARLSTQIS 120 Query: 121 IAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDADL 180 IAGRMLVYLPQ+ HIGISQRIENE ERE+LR KVQ L+ PEEKGGFIIRTMAEDASD DL Sbjct: 121 IAGRMLVYLPQESHIGISQRIENEVEREILREKVQKLILPEEKGGFIIRTMAEDASDGDL 180 Query: 181 QMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFHML 240 Q DVEYLRKTWA I +Q KT PAPTLL+QDL LAQRV+RDFV D TA+IQVDSREN+ L Sbjct: 181 QADVEYLRKTWANITQQAKTKPAPTLLYQDLDLAQRVMRDFVNDETASIQVDSRENYQKL 240 Query: 241 QEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAMTT 300 +FG +YTPSVL+KL HY GERPLFDLYGVEEEI+RALGRRVDLKSGGYLIVDQTEAMTT Sbjct: 241 LQFGELYTPSVLSKLAHYPGERPLFDLYGVEEEIQRALGRRVDLKSGGYLIVDQTEAMTT 300 Query: 301 IDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAVLA 360 IDVNTGSFVNGRNFDDTIFKTNLEA+HAIARQLRLRNLGGI+ILDFIDME+ EH+ AVL Sbjct: 301 IDVNTGSFVNGRNFDDTIFKTNLEASHAIARQLRLRNLGGIMILDFIDMENPEHKSAVLN 360 Query: 361 ELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTVCY 420 EL +AL RDRTK+SVSGFS LGLVEMTRKRTRESLAHILCE CPAC G+GQVKT RT+CY Sbjct: 361 ELNRALSRDRTKVSVSGFSALGLVEMTRKRTRESLAHILCEPCPACSGKGQVKTARTICY 420 Query: 421 EILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQQE 480 EILRE+ REAKQFNPREFRILASQVV+DMFLEEESQHLAMLGDF+GKPISLQV++ Y QE Sbjct: 421 EILRELTREAKQFNPREFRILASQVVIDMFLEEESQHLAMLGDFLGKPISLQVETVYHQE 480 Query: 481 QYDIILM 487 QYD+ILM Sbjct: 481 QYDVILM 487 >ref|ZP_02882889.1| ribonuclease, Rne/Rng family [Burkholderia graminis C4D1M] gb|EDT11173.1| ribonuclease, Rne/Rng family [Burkholderia graminis C4D1M] Length = 489 Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/489 (73%), Positives = 427/489 (87%), Gaps = 2/489 (0%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 M+E+ILIN+TPQETRVAL+ QGAVQELH+ERTLSRG GN+YLGKVVRVLPGMQSAFIDI Sbjct: 1 MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAR--SHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQ 118 GLERAAFLHVADIW R TP PIEK++ +GQ++ VQV+KDPIGTKGARLSTQ Sbjct: 61 GLERAAFLHVADIWHPRIAGEPQHQTPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ 120 Query: 119 ISIAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDA 178 +SIAGR LVYLPQ+ HIGISQ+IE+EAERE +R+++ A+LP +EKGG+I+RT+AEDA+ Sbjct: 121 VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATSE 180 Query: 179 DLQMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFH 238 +L DV YLRKTWATI+ QG+ P +LL+QDL+LAQRVLRDFV D T+ IQVDSRE + Sbjct: 181 ELAADVAYLRKTWATILSQGQRMPPTSLLYQDLNLAQRVLRDFVNDETSRIQVDSRETYQ 240 Query: 239 MLQEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAM 298 ML +F A +TP+V +KL HY GERPLFDLY +E EI+RAL RRVDLKSGGYL++DQTEAM Sbjct: 241 MLADFAAEFTPAVSSKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLVIDQTEAM 300 Query: 299 TTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAV 358 TTIDVNTG +V RNFDDTIFKTNLEAAH IARQLRLRNLGG+II+DFIDME+ EHR V Sbjct: 301 TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENVEHRDQV 360 Query: 359 LAELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTV 418 L+EL +AL RDRT+++V+GFS LGLVEMTRKRTRESLAH+LCE CP C+G+GQVKTPRTV Sbjct: 361 LSELKRALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTPRTV 420 Query: 419 CYEILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQ 478 CY++LRE++RE++QFNPREFR++ASQ V+D+FLEEESQHLAML DFIGKP+SLQV+S+ Sbjct: 421 CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS 480 Query: 479 QEQYDIILM 487 QEQYDI+LM Sbjct: 481 QEQYDIVLM 489 >ref|YP_001894933.1| Rne/Rng family ribonuclease [Burkholderia phytofirmans PsJN] gb|ACD15709.1| ribonuclease, Rne/Rng family [Burkholderia phytofirmans PsJN] Length = 489 Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/489 (73%), Positives = 426/489 (87%), Gaps = 2/489 (0%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 M+E+ILIN+TPQETRVAL+ QGAVQELH+ERTLSRG GN+YLGKVVRVLPGMQSAFIDI Sbjct: 1 MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAR--SHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQ 118 GLERAAFLHVADIW R TP PIEK++ +GQ++ VQV+KDPIGTKGARLSTQ Sbjct: 61 GLERAAFLHVADIWHPRIAGEPQHQTPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ 120 Query: 119 ISIAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDA 178 +SIAGR LVYLPQ+ HIGISQ+IE+EAERE +R+++ A+LP +EKGG+I+RT+AEDA+ Sbjct: 121 VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATSE 180 Query: 179 DLQMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFH 238 +L DV YLRKTWATI+ QG+ P +LL+QDL+LAQRVLRDFV D ++ IQVDSRE + Sbjct: 181 ELAGDVAYLRKTWATILSQGQRMPPTSLLYQDLNLAQRVLRDFVNDESSRIQVDSRETYQ 240 Query: 239 MLQEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAM 298 ML +F A +TP+V +KL HY GERPLFDLY +E EI+RAL RRVDLKSGGYL++DQTEAM Sbjct: 241 MLADFAAEFTPAVSSKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLVIDQTEAM 300 Query: 299 TTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAV 358 TTIDVNTG +V RNFDDTIFKTNLEAAH IARQLRLRNLGG+II+DFIDME+ EHR V Sbjct: 301 TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENVEHRDQV 360 Query: 359 LAELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTV 418 L EL KAL RDRT+++V+GFS LGLVEMTRKRTRESLAH+LCE CP C+G+GQVKTPRTV Sbjct: 361 LGELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTPRTV 420 Query: 419 CYEILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQ 478 CY++LRE++RE++QFNPREFR++ASQ V+D+FLEEESQHLAML DFIGKP+SLQV+S+ Sbjct: 421 CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS 480 Query: 479 QEQYDIILM 487 QEQYDI+LM Sbjct: 481 QEQYDIVLM 489 >ref|YP_003907614.1| ribonuclease, Rne/Rng family [Burkholderia sp. CCGE1003] gb|ADN58323.1| ribonuclease, Rne/Rng family [Burkholderia sp. CCGE1003] Length = 489 Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/489 (73%), Positives = 426/489 (87%), Gaps = 2/489 (0%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 M+E+ILIN+TPQETRVAL+ QGAVQELH+ERTLSRG GN+YLGKVVRVLPGMQSAFIDI Sbjct: 1 MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAR--SHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQ 118 GLERAAFLHVADIW R +P PIEK++ +GQ++ VQV+KDPIGTKGARLSTQ Sbjct: 61 GLERAAFLHVADIWHPRIAGEPQHQSPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ 120 Query: 119 ISIAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDA 178 +SIAGR LVYLPQ+ HIGISQ+IE+EAERE +R+++ A+LP +EKGG+I+RT+AEDA+ Sbjct: 121 VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATSE 180 Query: 179 DLQMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFH 238 +L DV YLRKTWATI+ QG+ P +LL+QDL+LAQRVLRDFV D T+ IQVDSRE + Sbjct: 181 ELAADVAYLRKTWATILSQGQRMPPTSLLYQDLNLAQRVLRDFVNDETSRIQVDSRETYQ 240 Query: 239 MLQEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAM 298 ML +F A +TP+V KL HY GERPLFDLY +E EI+RAL RRVDLKSGGYL++DQTEAM Sbjct: 241 MLADFAAEFTPAVSAKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLVIDQTEAM 300 Query: 299 TTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAV 358 TTIDVNTG +V RNFDDTIFKTNLEAAH IARQLRLRNLGG+II+DFIDME+ EHR V Sbjct: 301 TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENVEHRDQV 360 Query: 359 LAELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTV 418 L+EL +AL RDRT+++V+GFS LGLVEMTRKRTRESLAH+LCE CP C+G+GQVKTPRTV Sbjct: 361 LSELKRALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTPRTV 420 Query: 419 CYEILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQ 478 CY++LRE++RE++QFNPREFR++ASQ V+D+FLEEESQHLAML DFIGKP+SLQV+S+ Sbjct: 421 CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS 480 Query: 479 QEQYDIILM 487 QEQYDI+LM Sbjct: 481 QEQYDIVLM 489 >ref|ZP_06843394.1| ribonuclease, Rne/Rng family [Burkholderia sp. Ch1-1] gb|EFG68908.1| ribonuclease, Rne/Rng family [Burkholderia sp. Ch1-1] Length = 489 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/489 (73%), Positives = 425/489 (86%), Gaps = 2/489 (0%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 M+E+ILIN+TPQETRVAL+ QGAVQELH+ERTLSRG GN+YLGKVVRVLPGMQSAFIDI Sbjct: 1 MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAR--SHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQ 118 GLERAAFLHVADIW R P PIEK++ +GQ++ VQV+KDPIGTKGARLSTQ Sbjct: 61 GLERAAFLHVADIWHPRIAGEPQHQAPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ 120 Query: 119 ISIAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDA 178 +SIAGR LVYLPQ+ HIGISQ+IE+EAERE +R+++ A+LP +EKGG+I+RT+AEDA+ Sbjct: 121 VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATSE 180 Query: 179 DLQMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFH 238 +L DV YLRKTWATI+ QG+ P +LL+QDL+LAQRVLRDFV D T+ IQVDSRE + Sbjct: 181 ELAGDVAYLRKTWATILSQGQRMPPTSLLYQDLNLAQRVLRDFVNDETSRIQVDSRETYQ 240 Query: 239 MLQEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAM 298 ML +F A +TP+V +KL HY GERPLFDLY +E EI+RAL RRVDLKSGGYL++DQTEAM Sbjct: 241 MLADFAAEFTPAVSSKLHHYTGERPLFDLYNIESEIQRALSRRVDLKSGGYLVIDQTEAM 300 Query: 299 TTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAV 358 TTIDVNTG +V RNFDDTIFKTNLEAAH IARQLRLRNLGG+II+DFIDME+ EHR V Sbjct: 301 TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENVEHRDQV 360 Query: 359 LAELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTV 418 L EL KAL RDRT+++V+GFS LGLVEMTRKRTRESLAH+LCE CP C+G+GQVKTPRTV Sbjct: 361 LGELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTPRTV 420 Query: 419 CYEILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQ 478 CY++LRE++RE++QFNPREFR++ASQ V+D+FLEEESQHLAML DFIGKP+SLQV+S+ Sbjct: 421 CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS 480 Query: 479 QEQYDIILM 487 QEQYDI+LM Sbjct: 481 QEQYDIVLM 489 >ref|YP_004227538.1| Rne/Rng family ribonuclease [Burkholderia sp. CCGE1001] gb|ADX54478.1| ribonuclease, Rne/Rng family [Burkholderia sp. CCGE1001] Length = 489 Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/489 (73%), Positives = 425/489 (86%), Gaps = 2/489 (0%) Query: 1 MSEDILINITPQETRVALILQGAVQELHIERTLSRGLAGNIYLGKVVRVLPGMQSAFIDI 60 M+E+ILIN+TPQETRVAL+ QGAVQELH+ERTLSRG GN+YLGKVVRVLPGMQSAFIDI Sbjct: 1 MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI 60 Query: 61 GLERAAFLHVADIWEAR--SHDGQNTPAIPIEKLLHDGQSITVQVIKDPIGTKGARLSTQ 118 GLERAAFLHVADIW R +P PIEK++ +GQ++ VQV+KDPIGTKGARLSTQ Sbjct: 61 GLERAAFLHVADIWHPRIAGEPQHQSPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ 120 Query: 119 ISIAGRMLVYLPQDKHIGISQRIENEAERELLRSKVQALLPPEEKGGFIIRTMAEDASDA 178 +SIAGR LVYLPQ+ HIGISQ+IE+EAERE +R+++ A+LP +EKGG+I+RT+AEDA+ Sbjct: 121 VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATSE 180 Query: 179 DLQMDVEYLRKTWATIVKQGKTNPAPTLLHQDLSLAQRVLRDFVGDHTATIQVDSRENFH 238 +L DV YLRKTWATI+ QG+ P +LL+QDL+LAQRVLRDFV D T+ IQVDSRE + Sbjct: 181 ELAADVAYLRKTWATILSQGQRMPPTSLLYQDLNLAQRVLRDFVNDETSRIQVDSRETYQ 240 Query: 239 MLQEFGAIYTPSVLTKLTHYRGERPLFDLYGVEEEIERALGRRVDLKSGGYLIVDQTEAM 298 ML +F A +TP+V KL HY GERPLFDLY +E EI+RAL RRVDLKSGGYL++DQTEAM Sbjct: 241 MLADFAAEFTPAVSAKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLVIDQTEAM 300 Query: 299 TTIDVNTGSFVNGRNFDDTIFKTNLEAAHAIARQLRLRNLGGIIILDFIDMESTEHRQAV 358 TTIDVNTG +V RNFDDTIFKTNLEAAH IARQLRLRNLGG+II+DFIDME+ EHR V Sbjct: 301 TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENVEHRDQV 360 Query: 359 LAELGKALQRDRTKISVSGFSTLGLVEMTRKRTRESLAHILCETCPACKGRGQVKTPRTV 418 L EL +AL RDRT+++V+GFS LGLVEMTRKRTRESLAH+LCE CP C+G+GQVKTPRTV Sbjct: 361 LGELKRALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTPRTV 420 Query: 419 CYEILREVMREAKQFNPREFRILASQVVVDMFLEEESQHLAMLGDFIGKPISLQVQSDYQ 478 CY++LRE++RE++QFNPREFR++ASQ V+D+FLEEESQHLAML DFIGKP+SLQV+S+ Sbjct: 421 CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS 480 Query: 479 QEQYDIILM 487 QEQYDI+LM Sbjct: 481 QEQYDIVLM 489