BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0021.p (419 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751487.1| membrane spanning protein involved in lipopo... 204 3e-50 ref|YP_294983.1| O-antigen polymerase [Ralstonia eutropha JMP134... 199 1e-48 ref|YP_727325.1| membrane spanning protein involved in lipopolys... 182 1e-43 ref|YP_004686613.1| membrane spanning protein involved in lipopo... 160 3e-37 ref|YP_002006357.1| lipopolysaccharide o-antigen ligase transmem... 145 2e-32 ref|YP_002981958.1| O-antigen polymerase [Ralstonia pickettii 12... 131 3e-28 ref|YP_001899967.1| O-antigen polymerase [Ralstonia pickettii 12... 129 1e-27 ref|YP_003525487.1| O-antigen polymerase [Sideroxydans lithotrop... 123 5e-26 ref|ZP_06686185.1| hypothetical protein HMPREF0004_1761 [Achromo... 120 6e-25 ref|YP_001631449.1| membrane protein resembling polysaccharide p... 115 2e-23 >ref|YP_004751487.1| membrane spanning protein involved in lipopolysaccharide biosynthesis [Collimonas fungivorans Ter331] gb|AEK60664.1| membrane spanning protein involved in lipopolysaccharide biosynthesis [Collimonas fungivorans Ter331] Length = 417 Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 121/354 (34%), Positives = 201/354 (56%), Gaps = 4/354 (1%) Query: 63 LCFVMASAVLAVLIHQIGVGSFVFRELDRPLRLAFFGLVFFAMWQLGAEQLDRLRWAWIL 122 L M + ++AV +Q G+F+ R D P RLA F LVF+ + L + ++WA ++ Sbjct: 62 LGLAMCAPLIAVFANQAASGNFLGRTYDPPFRLAMFVLVFWIVSFLPIRYMKHVQWAIVI 121 Query: 123 ACLLCFIKAWIVTEGGSLPNSGSLGFMAGIAFSNAALLLGVWLLLSL--QLPMSRLQRWL 180 L IK +I+T+GG+ + F+ I F+ ALLLG++ + S+ P ++L ++ Sbjct: 122 GAFLSAIKIYILTDGGA--SRYGTDFIPIIIFAEMALLLGLFSVFSIAWNKPGNKLAIFI 179 Query: 181 SIGAIILALGVTFLVKTRGTWLVLPFYAVFFIFYLRQLSMTRKAVILLFPLLLVGVGMLS 240 A+ L V +L ++RG WL +P + + + + + K +++F ++L+G Sbjct: 180 KFAALCAGLYVAYLSQSRGVWLTIPVFIILAFLITKNIPTSYKLSVIVFFVILIGGVSHY 239 Query: 241 NAMVRERIVLVGSDIRSFADGTNKETSLGQRFQVWQGSWELFREQPWLGVGRDGFKTGLH 300 +V+ER+ + SD+ ++ G N +TSLG R Q+W+GSW LF E P GVG +GF L Sbjct: 240 GQIVKERVSVAESDMTQYSGGENVDTSLGIRLQLWRGSWVLFTEHPVFGVGVEGFPKALE 299 Query: 301 RLSDAGKVSELVAELPHSHNGMLFQMALWGVWGLIAWLLIYFVPLALFWRDLGHASVKVR 360 L++ ++ + A PHSHN +LF M+ G++GL A L +YFVP F RD+ + ++R Sbjct: 300 GLAERNIITPVAATYPHSHNEVLFMMSRLGLFGLFALLALYFVPAYYFLRDIQNRDHEIR 359 Query: 361 TYAAMGVSLCLGYWVFDFSDVMFFWVILNGFYAINLAIFFRAIVHAKQDLSGVP 414 A MGV+LCLG+ V DV+F W + +Y +++A F I+ +K+ L P Sbjct: 360 YTAGMGVALCLGFVVLGLVDVVFLWWEIYPYYVLSIAFFLTYIMKSKKLLKEDP 413 >ref|YP_294983.1| O-antigen polymerase [Ralstonia eutropha JMP134] gb|AAZ60139.1| O-antigen polymerase [Ralstonia eutropha JMP134] Length = 430 Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 139/423 (32%), Positives = 233/423 (55%), Gaps = 24/423 (5%) Query: 7 RSLTFVLLLAFSSLGLVVPNLANACLFLLTLLGIAAI----------FQARRERNWPSAQ 56 +SL LLLA+ ++ L V N NA LFLL +L + A+ F + WP Sbjct: 18 QSLVSALLLAYPAIALFVHNAGNAILFLLLILSVTAMTIRLQPDGVGFGELLKAYWP--- 74 Query: 57 FPAFRLLCFVMASAVLAVLIHQIGVGSFVFRELDRPLRLAFFGLVFFAMWQLGAEQLDRL 116 L MAS LA+ I+Q+ G F R+ DR LRLA F VF+ ++ + L L Sbjct: 75 ------LHLAMASGCLAIFINQLWTGEFAARDYDRALRLAIFPFVFWILFFVPIRHLKLL 128 Query: 117 RWAWILACLLCFIKAWIVTEGGSLPNSGSLGFMAGIAFSNAALLLGVWLLLSL--QLPMS 174 +W+++ A ++ KA+I T GG + + G++GF++ IA+S+ ALL GV ++S Sbjct: 129 QWSFLAAAVIAMAKAYIFTNGGDVRD-GNIGFISIIAYSDIALLAGVLCVVSFGWNEGKL 187 Query: 175 RLQRWLSIGAIILALGVTFLVKTRGTWLVLPFYAVFFIFYLRQLSMTRKAVILLFPLLLV 234 +L + I A + L + L TRG+WL +P + +FF+F+ R L + RK + + +++V Sbjct: 188 KLVLLVKILACVAGLYTSVLTATRGSWLAIPLFLIFFLFFAR-LEVRRKWLWVASFVVVV 246 Query: 235 GVGMLSNAMVRERIVLVGSDIRSFADGTNKETSLGQRFQVWQGSWELFREQPWLGVGRDG 294 G+ + N R + SD+ +++ G K TS G R Q+W + L +P G+GR+ Sbjct: 247 GLMLTLNQNAANRFLDTQSDLAAYSHGGGKSTSTGHRLQLWGAALTLIAREPVFGIGREN 306 Query: 295 FKTGLHRLSDAGKVSELVAELPHSHNGMLFQMALWGVWGLIAWLLIYFVPLALFWRDLGH 354 + + + ++ +++ + HSHN +LF + GV+GL++ L +Y VP F R+L + Sbjct: 307 YDSSIKEMARKKEITGELTRFAHSHNEILFSTVVSGVFGLLSALALYLVPGYFFARELSN 366 Query: 355 ASVKVRTYAAMGVSLCLGYWVFDFSDVMFFWVILNGFYAINLAIFFRAIVHAKQDLSGV- 413 + +RT A MG +L +G++ F +D+MFFW +L G+Y+I + F I+ +K S + Sbjct: 367 TAPDIRTAARMGCALVIGFFSFGLTDLMFFWPVLGGYYSIMIGAFLVFIIRSKAQPSQLS 426 Query: 414 PQS 416 PQ+ Sbjct: 427 PQA 429 >ref|YP_727325.1| membrane spanning protein involved in lipopolysaccharide biosynthesis [Ralstonia eutropha H16] emb|CAJ93957.1| membrane spanning protein involved in lipopolysaccharide biosynthesis [Ralstonia eutropha H16] Length = 429 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 133/405 (32%), Positives = 203/405 (50%), Gaps = 14/405 (3%) Query: 13 LLLAFSSLGLVVPNLANACLFLLTLLGIAAIF---QARRERNWPSAQFPAFRLLCFVMAS 69 +L AF +L V P ++N C LL LG +AI R R + MA+ Sbjct: 26 VLAAFPALMFVKPTVSNLCYGLL--LGWSAITLVAGGREGRTECGGLLRRYWFFMLAMAA 83 Query: 70 AVLAVLIHQIGVGSFVFRELDRPLRLAFFGLVFFAMWQLGAEQLDRLRWAWILACLLCFI 129 LAVL+ Q+ G+ LR A F + F M +LG + ++W +++ LL Sbjct: 84 LPLAVLLQQLLSGAEEPHVSYLYLRFALFIPLVFGMVRLGRGGMRSVQWGFVVCALLS-- 141 Query: 130 KAWI--VTEGGSLPNSGSLGFMAGIAFSNAALLLGVWLLLSL--QLPMSRLQRWLSIGAI 185 AWI T G + GS I SN ++L+G+ L+S+ P LQ L + A Sbjct: 142 AAWIHEATAAGRPVHVGSSNI---IPLSNLSMLMGILALISIGWDRPRDYLQSGLKLLAG 198 Query: 186 ILALGVTFLVKTRGTWLVLPFYAVFFIFYLRQLSMTRKAVILLFPLLLVGVGMLSNAMVR 245 L +++ TRG WL +P A + +L+ KA ++ L+G+ L +A V+ Sbjct: 199 FAGLYASYMSGTRGGWLAIPVLAFIALAASHRLTRMHKAAAMVGLAGLMGLAWLGSARVQ 258 Query: 246 ERIVLVGSDIRSFADGTNKETSLGQRFQVWQGSWELFREQPWLGVGRDGFKTGLHRLSDA 305 +R V S++ FA +T G R Q+W+ S EL + PW GVG + F+ L L Sbjct: 259 QRTADVVSEVSQFAQHVTPDTPTGIRLQLWRASLELIQAHPWTGVGPENFERTLQTLEAQ 318 Query: 306 GKVSELVAELPHSHNGMLFQMALWGVWGLIAWLLIYFVPLALFWRDLGHASVKVRTYAAM 365 ++ L A +PHSHN +L A G+ GL+A L +Y VP A F R LG+A + +AM Sbjct: 319 HVITPLAATMPHSHNELLHATATLGIPGLLAILALYLVPAAFFLRHLGNADRGTQVASAM 378 Query: 366 GVSLCLGYWVFDFSDVMFFWVILNGFYAINLAIFFRAIVHAKQDL 410 G++LC G+ VF ++VMF ++N FY++ +A+ F +V K L Sbjct: 379 GLALCCGFMVFGLTEVMFATTLVNAFYSLIMAVCFAYVVARKDAL 423 >ref|YP_004686613.1| membrane spanning protein involved in lipopolysaccharide biosynthesis [Cupriavidus necator N-1] gb|AEI78132.1| membrane spanning protein involved in lipopolysaccharide biosynthesis [Cupriavidus necator N-1] Length = 429 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 126/403 (31%), Positives = 201/403 (49%), Gaps = 10/403 (2%) Query: 13 LLLAFSSLGLVVPNLANACLFLLTLLGIAAIF---QARRERNWPSAQFPAFRLLCFVMAS 69 +L AF +L V P ++N C LL LG +AI R R A + L MA+ Sbjct: 26 VLAAFPALMFVKPTVSNLCYGLL--LGWSAITLVAGGRAGRAECGALLRRYWLFMLAMAA 83 Query: 70 AVLAVLIHQIGVGSFVFRELDRPLRLAFFGLVFFAMWQLGAEQLDRLRWAWILACLLCFI 129 LAVL+ Q+ G+ LR A F + F M +LG + ++W +++ LL Sbjct: 84 LPLAVLLQQLLAGAEEPHVSYLYLRFALFIPLVFGMVRLGRGGMRSVQWGFVVCALLS-- 141 Query: 130 KAWIVTEGGSLPNSGSLGFMAGIAFSNAALLLGVWLLLSL--QLPMSRLQRWLSIGAIIL 187 AWI E + +GF I SN ++L+G+ L+S+ P LQ L + A Sbjct: 142 AAWI-HEATAAGRPAHVGFSNIIPLSNLSMLMGILALISIGWDRPRGYLQSGLKLLAGSA 200 Query: 188 ALGVTFLVKTRGTWLVLPFYAVFFIFYLRQLSMTRKAVILLFPLLLVGVGMLSNAMVRER 247 L ++ TRG WL +P A+ + R+L+ K L L+ + + V++R Sbjct: 201 GLYASYTSGTRGGWLAIPVLALIALAASRRLTRVHKVAALAGLAGLMVLTWFGSPFVQQR 260 Query: 248 IVLVGSDIRSFADGTNKETSLGQRFQVWQGSWELFREQPWLGVGRDGFKTGLHRLSDAGK 307 V S++ F +TS+G R Q+W+ S ++ + PW GVG D ++ L L+ Sbjct: 261 TTDVVSELSQFDHHVTLDTSIGIRLQLWRTSLQMVQAHPWTGVGPDNYEQALQALAAQHV 320 Query: 308 VSELVAELPHSHNGMLFQMALWGVWGLIAWLLIYFVPLALFWRDLGHASVKVRTYAAMGV 367 ++ A +PH+HN +L A G+ GL+A L++Y VP A F R L + + +AMG+ Sbjct: 321 ITAEAATMPHTHNDILHAAATLGIPGLLAVLMLYLVPAAFFLRHLRNDDRDTQVASAMGL 380 Query: 368 SLCLGYWVFDFSDVMFFWVILNGFYAINLAIFFRAIVHAKQDL 410 +LC G+ VF ++VMF ++N FY++ +A+ F +V K L Sbjct: 381 ALCCGFMVFGLTEVMFATTLVNAFYSLIMAVCFAYVVARKDAL 423 >ref|YP_002006357.1| lipopolysaccharide o-antigen ligase transmembrane protein [Cupriavidus taiwanensis LMG 19424] emb|CAQ70294.1| putative lipopolysaccharide o-antigen ligase transmembrane protein [Cupriavidus taiwanensis LMG 19424] Length = 429 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 130/424 (30%), Positives = 204/424 (48%), Gaps = 40/424 (9%) Query: 12 VLLLAFSSLGLVVPNLANACLFLLTLLGIAAI------------FQARRERNWPSAQFPA 59 V+L AF +L V P+L+N C LL LG + I + R WP Sbjct: 25 VVLAAFPTLMFVKPSLSNTCFGLL--LGWSVIALAAGGRAALAEYGCILRRYWP------ 76 Query: 60 FRLLCFVMASAVLAVLIHQIGVGSFVFRELDRP------LRLAFFGLVFFAMWQLGAEQL 113 MA+ LAVL+ Q+ G+ D P LR A F ++ + +LG + Sbjct: 77 ---FMLAMAALPLAVLLQQLLAGA------DDPHVPYLYLRFALFIVLVPGLLRLGRRGM 127 Query: 114 DRLRWAWILACLLCFIKAWIVTEGGSLPNSGSLGFMAGIAFSNAALLLGVWLLLSL--QL 171 ++ ++ AC L I A + E + +GF I F N ALL G+ ++S+ Sbjct: 128 QNIQLGFV-ACAL--ISALWLHEVAAAGRPSHVGFSNVIPFGNLALLTGMLAVISIGWNR 184 Query: 172 PMSRLQRWLSIGAIILALGVTFLVKTRGTWLVLPFYAVFFIFYLRQLSMTRKAVILLFPL 231 P L + L +++ TRG WL +P A+ + R+L+ KA +L Sbjct: 185 PGDHWLAGLKLLGGFAGLYASYMSGTRGGWLAIPVLALIALAASRRLTRLHKAGVLAGLA 244 Query: 232 LLVGVGMLSNAMVRERIVLVGSDIRSFADGTNKETSLGQRFQVWQGSWELFREQPWLGVG 291 L+ +G S+AMV++R V S++ F+ +TS+G R Q+WQ S + + PW GVG Sbjct: 245 GLMALGWFSSAMVQQRTAAVVSELSKFSQHVTLDTSIGIRLQLWQASLRMLQAHPWTGVG 304 Query: 292 RDGFKTGLHRLSDAGKVSELVAELPHSHNGMLFQMALWGVWGLIAWLLIYFVPLALFWRD 351 D ++ L L+ ++ L A LPH+HN +L A G+ GL+A L +Y VP+ F R Sbjct: 305 PDNYEAILQSLAAQHVITPLAATLPHAHNDVLHAAATLGILGLLAVLALYLVPIVFFLRH 364 Query: 352 LGHASVKVRTYAAMGVSLCLGYWVFDFSDVMFFWVILNGFYAINLAIFFRAIVHAKQDLS 411 L A+ + +AMG++LC G+ VF ++ MF + N FY++ +A+ F +V K Sbjct: 365 LRSANRGTQVASAMGLALCFGFMVFGLTEAMFITTLTNAFYSLVIAVCFSYVVVHKNVAP 424 Query: 412 GVPQ 415 P Sbjct: 425 AQPD 428 >ref|YP_002981958.1| O-antigen polymerase [Ralstonia pickettii 12D] gb|ACS63286.1| O-antigen polymerase [Ralstonia pickettii 12D] Length = 426 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 9/312 (2%) Query: 107 QLGAEQLDRLRWAWILACLLCFIKAWIVTEGGSLPNSGSLGFMAGIAFSNAALLLGVWLL 166 QL QL+ ++W + L + A++ G G+ F I F N +LL+G++ L Sbjct: 118 QLRPTQLESVQWGCVAGALASIVWAYLELRVGRPDMIGA--FANTIPFGNLSLLMGLFSL 175 Query: 167 LSLQLPMSRLQRWLSIGAIILALGV----TFLVKTRGTWLVLPFYAVFFIFYLRQLSMTR 222 +S+ S+ WL I ++A G ++L ++RG W+ +P + + LR ++ + Sbjct: 176 ISIG--WSKGDGWLLIILRVVAGGAGLYASYLSQSRGGWIAIPVLLLIAVATLRHVAWKK 233 Query: 223 KAVILLFPLLLVGVGMLSNAMVRERIVLVGSDIRSFADGTNKETSLGQRFQVWQGSWELF 282 + LL L+ +S+++VR R SD+R++ G TS+G RFQ+W+ + + Sbjct: 234 RVTALLVFFALLAAVCVSSSVVRARFDQAVSDLRAYQAG-QTNTSIGIRFQLWKAAALML 292 Query: 283 REQPWLGVGRDGFKTGLHRLSDAGKVSELVAELPHSHNGMLFQMALWGVWGLIAWLLIYF 342 P GVGR F+ L + G +++ + H+HN L+ A GV G+ A L +Y Sbjct: 293 TRHPLAGVGRGQFEPALKAIHAEGLITQEATAVEHAHNEFLYNGATLGVLGIGALLAMYL 352 Query: 343 VPLALFWRDLGHASVKVRTYAAMGVSLCLGYWVFDFSDVMFFWVILNGFYAINLAIFFRA 402 VP F R +RT AMG++LC+G+ +F ++VM FY++ +AIF Sbjct: 353 VPAVYFVRAALCDDGILRTTGAMGLTLCVGFVLFGLTEVMLIIAQTVVFYSVMVAIFTAH 412 Query: 403 IVHAKQDLSGVP 414 I +Q L P Sbjct: 413 IHRRRQQLGAAP 424 >ref|YP_001899967.1| O-antigen polymerase [Ralstonia pickettii 12J] ref|ZP_07676477.1| O-antigen polymerase superfamily [Ralstonia sp. 5_7_47FAA] gb|ACD27535.1| O-antigen polymerase [Ralstonia pickettii 12J] gb|EFP65049.1| O-antigen polymerase superfamily [Ralstonia sp. 5_7_47FAA] Length = 426 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/313 (29%), Positives = 154/313 (49%), Gaps = 11/313 (3%) Query: 107 QLGAEQLDRLRWAWILACLLCFIKAWIVTEGGSLPNSGSLGFMAGIAFSNAALLLGVWLL 166 QL +QL+ ++W + L + A++ G + G+ F I F N +LL+ ++ L Sbjct: 118 QLRPKQLESVQWGCVAGALASAVWAYLELRAGRVGMVGA--FSNAIPFGNLSLLMALFAL 175 Query: 167 LSLQLPMSRLQRWLSIGAIILA----LGVTFLVKTRGTWLVLPFYAVFFIFYLRQLS-MT 221 +S+ + W I +LA L ++L + RG W+ +P + + LR +S Sbjct: 176 MSIG--WTEDDGWALIALRLLAGCAGLYASYLSQARGGWIAIPVLLLIAVATLRHVSWKK 233 Query: 222 RKAVILLFPLLLVGVGMLSNAMVRERIVLVGSDIRSFADGTNKETSLGQRFQVWQGSWEL 281 R +LLF + L+ V +S+++VR R DI ++ G TS+G RFQ+W+ + + Sbjct: 234 RLTALLLFFVFLIAV-CVSSSVVRTRFDQAMEDIHAYQAG-QTNTSVGIRFQLWKAATLM 291 Query: 282 FREQPWLGVGRDGFKTGLHRLSDAGKVSELVAELPHSHNGMLFQMALWGVWGLIAWLLIY 341 P GVGR F L + G +++ H+HN L+ A GV G+ A L +Y Sbjct: 292 LTRHPLAGVGRGQFGPALKAIHAEGLITQEATAFEHAHNEFLYNGATLGVLGIGALLALY 351 Query: 342 FVPLALFWRDLGHASVKVRTYAAMGVSLCLGYWVFDFSDVMFFWVILNGFYAINLAIFFR 401 VP A F R +RT AMG++LC+G+ +F ++VM FY++ +A+F Sbjct: 352 LVPAAYFLRAALCDDRVLRTTGAMGLTLCVGFLLFGLTEVMLIIAQTVVFYSVMVAVFTA 411 Query: 402 AIVHAKQDLSGVP 414 I +Q L P Sbjct: 412 HIHRRRQQLGAAP 424 >ref|YP_003525487.1| O-antigen polymerase [Sideroxydans lithotrophicus ES-1] gb|ADE13100.1| O-antigen polymerase [Sideroxydans lithotrophicus ES-1] Length = 425 Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 96/348 (27%), Positives = 165/348 (47%), Gaps = 8/348 (2%) Query: 60 FRLLCFVMASAVLAVLIHQIGVGSFVFRELDRPLRLAFFGLVFFAMWQLGAEQLDRLRWA 119 F + M + +A+LI Q + ++ D R VF + +L L+ A Sbjct: 65 FTIYTVSMCAMSVAILISQTYLQNYTAHPYDAASRYWLAIPVFLLLQRLRPAVFVVLQVA 124 Query: 120 WILACLLCFIKAWIVTEGGSLPNSGSLGFMAGIAFSNAALLLGVWLLLSLQ--LPMSRLQ 177 + LA ++ F+ + + G N +G + I F + L+ GV L S+ ++L Sbjct: 125 FPLAAIIGFMMSNDLGAGSE--NRSGIGTLDLIHFGDLELIFGVLSLFSINWLGRDNKLL 182 Query: 178 RWLSIGAIILALGVTFLVKTRGTWLVLP-FYAVFFIFYLRQLSMTRKAVILLFPLLLVGV 236 R L + +L L +F +RG W +P F ++F F ++S+ A L+ ++ Sbjct: 183 RLLKVTGFMLGLLASFESGSRGGWFAIPVFILIYFYFRTSRVSLKMAAASLIATSFVIAF 242 Query: 237 GMLSNAMVRERIVLVGSDIRSFADGTNKETSLGQRFQVWQGSWELFREQPWLGVGRDGFK 296 L++ + R+ + +DI +F G N++TS G R+Q+++ + ++F P GVG +GF Sbjct: 243 VYLASGTFQHRVNELINDIATFEQG-NRDTSTGVRWQLYKAAADIFAHHPIFGVGPEGFA 301 Query: 297 TGLHRLSDAGKVSELVAELPHS--HNGMLFQMALWGVWGLIAWLLIYFVPLALFWRDLGH 354 + + DAGK++ L AEL HN +L + A G++GL A L YFVP LFWR Sbjct: 302 LEMQPMLDAGKITPLAAELGRGEVHNDILSKAAGMGIFGLAALLASYFVPFGLFWRATKS 361 Query: 355 ASVKVRTYAAMGVSLCLGYWVFDFSDVMFFWVILNGFYAINLAIFFRA 402 +VR +G++ G VF + + FY +A+ A Sbjct: 362 TLREVRRAGILGIAFVSGILVFGVTVEFLNLTMATAFYGFTVAVLLAA 409 >ref|ZP_06686185.1| hypothetical protein HMPREF0004_1761 [Achromobacter piechaudii ATCC 43553] gb|EFF76901.1| hypothetical protein HMPREF0004_1761 [Achromobacter piechaudii ATCC 43553] Length = 430 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 77/244 (31%), Positives = 128/244 (52%), Gaps = 9/244 (3%) Query: 147 GFMAGIAFSNAALLLGVWLLLSLQLPM----SRLQRWLSIGAIILALGVTFLVKTRGTWL 202 G +AF+N LL G LLSL RL+ + + +L + T+ +TR +W+ Sbjct: 161 GRYNAVAFANLTLLFGGMTLLSLGFGACTRWPRLETAVKVAVALLTVYATWKSETRSSWM 220 Query: 203 VLPFYAVFFIFYLRQLSMTRKAVILLFPLLLVGVGMLSNAM--VRERIVLVGSDIRSFAD 260 +LP A+ F+ LR S R+ + L VG+ + + A+ R+ + D++ FA Sbjct: 221 LLPILALVFLLGLRNWS--RRHKVYCAVALCVGLAVSATAIWTFSSRMHEISGDVQGFAT 278 Query: 261 GTNKETSLGQRFQVWQGSWELFREQPWLGVGRDGFKTGLHRLSDAGKVSELVAE-LPHSH 319 +N++TS G R Q+W + +F + P +GVG F+ L +L G V++ V E H Sbjct: 279 SSNRDTSFGIRLQLWHAALLMFEKSPIVGVGPSMFREELRQLQTQGIVTQEVVEGFGEPH 338 Query: 320 NGMLFQMALWGVWGLIAWLLIYFVPLALFWRDLGHASVKVRTYAAMGVSLCLGYWVFDFS 379 N ML ++ +G+ GL+ L +Y VP A+F+R + +R A +G+ CLGY F + Sbjct: 339 NDMLGALSGYGLLGLMTILALYLVPAAVFFRRVASDDRVIRVGAQLGLLFCLGYCAFSLT 398 Query: 380 DVMF 383 ++MF Sbjct: 399 EMMF 402 >ref|YP_001631449.1| membrane protein resembling polysaccharide polymerases [Bordetella petrii DSM 12804] emb|CAP43181.1| membrane protein resembling polysaccharide polymerases [Bordetella petrii] Length = 419 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 96/360 (26%), Positives = 177/360 (49%), Gaps = 11/360 (3%) Query: 50 RNWPSAQFPAFRLLCFVMASAVLAVLIHQIGVGSFVFRELDRPLRLAFFGLVFFAMWQLG 109 ++W +F + +A+ + +L++ +G + EL++ LR A V + + ++ Sbjct: 48 KHWEPFEFGELSWMSVALATPLAVMLVNSAVLGIWSSSELEKLLRFALAIPVAWLLLRVP 107 Query: 110 AEQLDRLRWAWILACLLCFIKAWIVTEGGSLPNSGSLGFMAG----IAFSNAALLLGVWL 165 L +++W+ + + +++ L G++ G +AF++ L G+ Sbjct: 108 RRWLQQVQWSLLAGAYAGSVMLFVIMLSPDL-GRGAVSEYGGRYNAVAFADLTLFFGLAS 166 Query: 166 LLSLQLPMSRLQRW---LSIGAIILALGVTFLVKTRGTWLVLPFYAVFFIFYLRQLSMTR 222 L+L +SR R L I + L+L +L +TR W +L + V + R S+ Sbjct: 167 CLTLPGRLSRFSRLEAVLKIFVVPLSLWAAWLSQTRSCWALLVVFGVVLLLANRHWSLRA 226 Query: 223 KAVILLFPLLLVGVGMLSNAMVRE-RIVLVGSDIRSFADGTNKETSLGQRFQVWQGSWEL 281 K + V G + +E R V D+ + + +++TS+G R Q+WQ SW + Sbjct: 227 KTAFVAGLSAFVVAGAVFAWHAKESRFAEVRHDLTRY-EHQDRDTSVGIRLQLWQASWLM 285 Query: 282 FREQPWLGVGRDGFKTGLHRLSDAGKVSELVA-ELPHSHNGMLFQMALWGVWGLIAWLLI 340 F+E+P GVG F+ L RL D G V++LVA + HN L +A++G+ GL++ L + Sbjct: 286 FKEKPLTGVGAPNFRAELARLHDQGVVTKLVATKFGEPHNDFLGALAMYGLPGLLSILAL 345 Query: 341 YFVPLALFWRDLGHASVKVRTYAAMGVSLCLGYWVFDFSDVMFFWVILNGFYAINLAIFF 400 YF+P A+F+R LG + A +G+ LGY F +++MF + YA+ + + F Sbjct: 346 YFIPAAIFFRRLGSSDPVTHMGAKLGLLFTLGYATFSLTEMMFRSMRSVPIYAVTVVVLF 405