BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0011.p (451 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776966.1| TPR repeat-containing protein [Herbaspirillu... 920 0.0 ref|YP_003604650.1| hypothetical protein [Burkholderia sp. CCGE1... 364 2e-98 ref|ZP_03269010.1| TPR repeat-containing protein [Burkholderia s... 364 2e-98 ref|YP_001859985.1| TPR repeat-containing protein [Burkholderia ... 359 5e-97 ref|ZP_06842166.1| TPR repeat-containing protein [Burkholderia s... 350 2e-94 ref|YP_001895065.1| hypothetical protein Bphyt_1426 [Burkholderi... 350 3e-94 ref|YP_558015.1| TPR/sulfotransferase domain-containing protein ... 346 4e-93 ref|ZP_03127398.1| TPR repeat-containing protein [Chthoniobacter... 330 5e-88 ref|ZP_08869415.1| TPR repeat-containing protein I [Azospirillum... 325 1e-86 ref|YP_378620.1| TPR repeat-containing protein [Chlorobium chlor... 322 7e-86 >ref|YP_003776966.1| TPR repeat-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ65058.1| TPR repeat-containing protein [Herbaspirillum seropedicae SmR1] Length = 603 Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/451 (99%), Positives = 447/451 (99%) Query: 1 VLHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFF 60 VLHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFF Sbjct: 153 VLHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFF 212 Query: 61 EAISNRGYVLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRA 120 EAISNRGYVLFKMQRPAEALQAYDRALALDE APDLWFNRGSTLEQLYRFEEASESYRRA Sbjct: 213 EAISNRGYVLFKMQRPAEALQAYDRALALDERAPDLWFNRGSTLEQLYRFEEASESYRRA 272 Query: 121 KALKPDAGSATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEG 180 KALKPDAGSATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEG Sbjct: 273 KALKPDAGSATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEG 332 Query: 181 KTILLHAEQGFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMR 240 KTILLHAEQGFGDTLQFVRYAPLLAA GARVILEVQPALTRQLAGLPGVTQVIGTDHFMR Sbjct: 333 KTILLHAEQGFGDTLQFVRYAPLLAARGARVILEVQPALTRQLAGLPGVTQVIGTDHFMR 392 Query: 241 PPFDFHCPLMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRNRALRVGLVWAGSS 300 PPFDFHCPLMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRNRALRVGLVWAGSS Sbjct: 393 PPFDFHCPLMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRNRALRVGLVWAGSS 452 Query: 301 AQTHPDAVRIDGERSLPFATLVPLVELAREHAGLEFYSLQVGQDAVAQLHAHPLASLVRD 360 AQTHPDAVRIDGERSLPFATL PLVELAREHA LEFYSLQVGQDAVAQLHAHPLASLVRD Sbjct: 453 AQTHPDAVRIDGERSLPFATLAPLVELAREHAALEFYSLQVGQDAVAQLHAHPLASLVRD 512 Query: 361 CSPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSPW 420 CSPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSPW Sbjct: 513 CSPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSPW 572 Query: 421 YGGMTIFGQRTAGQWDEVIARVRAALQQQLA 451 YGGMTIFGQRTAGQWDEVIARVRAALQQQLA Sbjct: 573 YGGMTIFGQRTAGQWDEVIARVRAALQQQLA 603 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 63/117 (53%) Query: 17 RAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRGYVLFKMQRP 76 +A+ L PD ++ +F+ + D+A+ YD L V DF EA+ RG L ++ R Sbjct: 67 KAIELNPDHLDTYFDHAGALAHLGRDDEAVARYDLVLTVNADFVEALLARGAALRRLGRN 126 Query: 77 AEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDAGSATWN 133 EAL +RA AL D WF RG+ L Y + +A ESY RA AL+PD A +N Sbjct: 127 REALADLERATALAPDNADAWFQRGNVLHDSYAYGDARESYERAVALRPDFIEAWFN 183 >ref|YP_003604650.1| hypothetical protein [Burkholderia sp. CCGE1002] gb|ADG15139.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002] Length = 579 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 208/448 (46%), Positives = 273/448 (60%), Gaps = 18/448 (4%) Query: 10 DARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRGYV 69 +A SYERA++L P+F AW N +D + AL + D+AL +QPD+ +A SNRG V Sbjct: 131 EALASYERALSLVPEFAPAWNNRACVLRDLGRYADALDSCDQALALQPDYADAWSNRGNV 190 Query: 70 LFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDAGS 129 L + +P EA + Y RAL L D W N G L + E+A SY+RA AL P + Sbjct: 191 LGDLNQPHEAQRCYQRALELAPGFVDAWNNLGLAQIDLNQREQALSSYQRALALNPASVE 250 Query: 130 ATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEGKTILLHAEQ 189 WN+AL L+ G F +GW+ +E RW +++ +R F QPLWLG+ PL+GKTILLHAEQ Sbjct: 251 THWNQALCLLQMGRFESGWREYEWRWERSRIKAGRRAFAQPLWLGDFPLDGKTILLHAEQ 310 Query: 190 GFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMRPPFDFHCPL 249 G GDTLQF RYAPL+A GA+V+LEV L R L+ L GV Q+I + PPFD HCPL Sbjct: 311 GLGDTLQFCRYAPLVAKLGAKVVLEVPGPLMRLLSTLDGVDQLIEAGQPL-PPFDCHCPL 369 Query: 250 MSLPLACKTFSEADIPRA-PYLLPEASSWAAWHQRLPRN----------RALRVGLVWAG 298 +SLP A T EA IP A PYL + ++ + W +R+ N + L+VGLVWAG Sbjct: 370 LSLPRAFST-DEASIPAATPYLFAQPAAASEWRERIESNGNTNADGNAIQPLKVGLVWAG 428 Query: 299 SSAQTHPDAVRIDGERSLPFATLVPLVELAREHAGLEFYSLQVGQDAVAQLHAHPLASLV 358 + + +ID RSL F L PL+++ + F+S+Q G + A V Sbjct: 429 ENRAHVAELRKIDARRSLAFEQLAPLLDV----PNVRFFSVQKGAAGAQLAASA-YAERV 483 Query: 359 RDCSPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDS 418 D + LHDFA+T AL+A LDL+I+VDTS HLAGALG+PVW+LNR + CWRW +ER D+ Sbjct: 484 ADYTELLHDFADTAALVAGLDLVISVDTSTAHLAGALGKPVWILNRFDTCWRWLLERSDT 543 Query: 419 PWYGGMTIFGQRTAGQWDEVIARVRAAL 446 PWY +F Q G WD VI VR AL Sbjct: 544 PWYPSARLFRQPQLGAWDSVIDAVRGAL 571 >ref|ZP_03269010.1| TPR repeat-containing protein [Burkholderia sp. H160] gb|EDZ99402.1| TPR repeat-containing protein [Burkholderia sp. H160] Length = 579 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 209/448 (46%), Positives = 275/448 (61%), Gaps = 18/448 (4%) Query: 10 DARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRGYV 69 DA SYERA++L P+F AW N +D + AL + D AL +QP++ +A SNRG V Sbjct: 131 DALASYERALSLAPEFAAAWNNRACVLRDLGRHADALDSCDNALVLQPNYPDAWSNRGNV 190 Query: 70 LFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDAGS 129 L + +P EA + Y RAL L + D W N G L + E+A SY RA AL P + Sbjct: 191 LGDLNQPHEAQRCYQRALELAPAFVDAWNNLGLAQVDLNQREQALSSYERALALNPASAE 250 Query: 130 ATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEGKTILLHAEQ 189 A WN+AL L+ G F GW+ +E RW +++ +R F +P WLG+ PL+GKTILLHAEQ Sbjct: 251 AHWNQALCLLQMGRFDTGWREYEWRWERSRIKAGKRAFGEPRWLGDFPLDGKTILLHAEQ 310 Query: 190 GFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMRPPFDFHCPL 249 G GDTLQF RYA L+A GA+V+LEV AL R L+ L GV ++I + PPFD HCPL Sbjct: 311 GLGDTLQFCRYASLVAGLGAKVVLEVPGALLRLLSTLEGVDRLIEAGQPL-PPFDCHCPL 369 Query: 250 MSLPLACKTFSEADIPRA-PYLLPEASSWAAWHQRLPRN----------RALRVGLVWAG 298 +SLPLA T +EA IP A PYL + ++ + W +R+ R+ R L+VGLVWAG Sbjct: 370 LSLPLAFST-NEASIPAATPYLFAQPAAVSEWRERIERDANTHANGSAIRPLKVGLVWAG 428 Query: 299 SSAQTHPDAVRIDGERSLPFATLVPLVELAREHAGLEFYSLQVGQDAVAQLHAHPLASLV 358 + + +ID RSL F L PL+++ + F+S+Q G A QL V Sbjct: 429 ENRAHVAELRKIDARRSLAFEQLAPLLDV----PNVCFFSVQKGA-AAPQLAESAHRERV 483 Query: 359 RDCSPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDS 418 D + LHDFA+T AL+A+LDL+I+VDTS HLAGAL +PVW+LNR + CWRW +ER D+ Sbjct: 484 ADYTDLLHDFADTAALIASLDLVISVDTSTAHLAGALDKPVWILNRFDTCWRWLLERSDT 543 Query: 419 PWYGGMTIFGQRTAGQWDEVIARVRAAL 446 PWY +F Q G WD VI VR AL Sbjct: 544 PWYPSARLFRQPALGDWDSVIGTVRDAL 571 >ref|YP_001859985.1| TPR repeat-containing protein [Burkholderia phymatum STM815] gb|ACC72939.1| TPR repeat-containing protein [Burkholderia phymatum STM815] Length = 578 Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 203/434 (46%), Positives = 264/434 (60%), Gaps = 9/434 (2%) Query: 9 GDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRGY 68 +A S+E+A+AL+P +AW N +D ++ D AL D A+ +Q + EA SNR Sbjct: 130 AEALASFEKAIALQPALAQAWNNCACVLRDLDRPDDALACCDEAIALQAGYAEAWSNRAN 189 Query: 69 VLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDAG 128 L + RP +A +Y RAL L S D N G T L + EEA +SY RA AL P+ Sbjct: 190 ALSDLNRPLDAEASYRRALELAPSFVDARSNLGLTQIDLKQHEEALQSYERALALNPEHA 249 Query: 129 SATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEGKTILLHAE 188 A WN AL L+ G GW+ +E RW +M+G QR QPLWLG+ PLEGKTILLHAE Sbjct: 250 EAHWNRALCLLQMGRLDEGWQEYEWRWQRHRMQGAQRHVGQPLWLGQFPLEGKTILLHAE 309 Query: 189 QGFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMRPPFDFHCP 248 QG GDTLQF RY PL+AA GA+VILEV L R L L GV +++ + + PPFD H P Sbjct: 310 QGLGDTLQFCRYVPLVAAMGAKVILEVPQELVRLLRTLNGVAELVEQEQPL-PPFDCHAP 368 Query: 249 LMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRN--RALRVGLVWAGSSAQTHPD 306 L+SLPLA T + R PYL P+ S W +RL + RAL+VGLVWAG + + Sbjct: 369 LLSLPLAFGTNVDNIPSRTPYLHPDESDTERWSERLASDASRALKVGLVWAGGNRPHVAE 428 Query: 307 AVRIDGERSLPFATLVPLVELAREHAGLEFYSLQVGQDAVAQLHAHP-LASLVRDCSPEL 365 + D RS+ LVP+++ ++FYSLQ G A QL +P LA + D + E Sbjct: 429 LRKTDARRSIALDMLVPILDTPH----VQFYSLQKGP-ASGQLRGNPQLAGRIVDYTDEF 483 Query: 366 HDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSPWYGGMT 425 DFA+T A ++NLDL+I+VDT+V HLAGA G PVW++NR + CWRW ++R DSPWY Sbjct: 484 ADFADTAAFVSNLDLVISVDTAVAHLAGATGTPVWIMNRFDTCWRWLLDRTDSPWYPHAR 543 Query: 426 IFGQRTAGQWDEVI 439 +F Q T G WD VI Sbjct: 544 LFRQPTLGDWDSVI 557 >ref|ZP_06842166.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1] gb|EFG70118.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1] Length = 600 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 201/472 (42%), Positives = 268/472 (56%), Gaps = 42/472 (8%) Query: 8 YGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRG 67 + +A S ERA+AL+P F +A N GN N+ AL ++DRA+ + PDF +A +NR Sbjct: 118 FDEALASAERALALQPKFPDALNNRGNAQAGLNRPLDALASFDRAIALTPDFAQAWNNRA 177 Query: 68 YVLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKAL---- 123 VL + RPA+AL + D ALAL PD W NRG+ L + EEA SYRRA L Sbjct: 178 CVLRDLGRPADALASCDHALALQRDYPDAWSNRGNAFSDLNQPEEAERSYRRALELAPAF 237 Query: 124 ------------------------------KPDAGSATWNEALMQLRQGDFVNGWKGFET 153 P A WNE+L L+ G GW+ +E Sbjct: 238 ADAWNNLGLAQIDLNQHAQALSSYERALAANPSAAETHWNESLCLLQTGQLEAGWRKYEW 297 Query: 154 RWATEQMRGQQRQFMQPLWLGEQPLEGKTILLHAEQGFGDTLQFVRYAPLLAAHGARVIL 213 RW +++ +R F QPLWLG+ ++GKTILLHAEQG GDTLQF RYA L++ GA+V+L Sbjct: 298 RWERSRLKASRRVFAQPLWLGDFSIDGKTILLHAEQGLGDTLQFCRYAALVSKLGAKVVL 357 Query: 214 EVQPALTRQLAGLPGVTQVIGTDHFMRPPFDFHCPLMSLPLACKTFSEADIPRAPYLLPE 273 EV P L R ++ L GV Q+I + P FD HCPL+SLPLA KT ++ PYL Sbjct: 358 EVPPELMRLMSTLDGVDQLIEAGEAL-PSFDCHCPLLSLPLAFKTDLDSIPSATPYLYAH 416 Query: 274 ASSWAAWHQRL--PRNRALRVGLVWAGSSAQTHPDAVRIDGERSLPFATLVPLVELAREH 331 A + W R+ + L+VGLVWAG + + + D RS+ F L P++++ Sbjct: 417 AEAARQWRDRIHAQADTRLKVGLVWAGGNRPHVAELRKNDARRSIAFEQLAPILDV---- 472 Query: 332 AGLEFYSLQVGQDAVAQLHAHPLASLVRDCSPELHDFAETGALLANLDLLITVDTSVCHL 391 ++F+SLQ G A QL + + D + EL DFA+T AL+ANLDL+I+VDTS HL Sbjct: 473 PNVQFFSLQKGP-AAQQLKSGEWGGRIVDYTEELDDFADTAALVANLDLVISVDTSTAHL 531 Query: 392 AGALGRPVWLLNRHNGCWRWQVEREDSPWYGGMTIFGQRTAGQWDEVIARVR 443 AGAL RPVW+LNR + CWRW +ER D+PWY G +F Q G WD V+ R Sbjct: 532 AGALDRPVWILNRFDTCWRWMLERTDTPWYPGARLFRQPALGDWDSVMQAAR 583 >ref|YP_001895065.1| hypothetical protein Bphyt_1426 [Burkholderia phytofirmans PsJN] gb|ACD15841.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN] Length = 574 Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 197/440 (44%), Positives = 263/440 (59%), Gaps = 8/440 (1%) Query: 10 DARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRGYV 69 DA S++RA+AL PDF +AW N +D + AL + D AL +QP + +A SNRG Sbjct: 131 DALGSFDRAIALNPDFAQAWNNRACVLRDLGRPADALASCDHALALQPGYPDAWSNRGNA 190 Query: 70 LFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDAGS 129 + +P EA + Y RAL L + D W N G T L + +A SY RA A+ DA Sbjct: 191 FSDLNQPEEAERCYRRALELAPAFADAWNNLGLTQIDLNQHAQALVSYERALAVNSDAAE 250 Query: 130 ATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEGKTILLHAEQ 189 WNE+L L+ GW+ +E RW +++ +R F +PLWLG+ ++GKTILLHAEQ Sbjct: 251 THWNESLCLLQMRQLEAGWQKYEWRWERSRIKASRRSFAEPLWLGDFSIDGKTILLHAEQ 310 Query: 190 GFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMRPPFDFHCPL 249 G GDTLQF RYA L++ GA+V+LEV L R +A L GV Q+I + P FD HCPL Sbjct: 311 GLGDTLQFCRYAALVSKLGAKVVLEVPRELMRLMATLDGVDQLIEAGQTL-PSFDCHCPL 369 Query: 250 MSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRL--PRNRALRVGLVWAGSSAQTHPDA 307 +SLPLA KT ++ PYL +A + W +RL P + L+VGLVWAG + + Sbjct: 370 LSLPLAFKTGLDSIPSNTPYLCADAEAARQWRERLHAPADARLKVGLVWAGGNRPHVAEL 429 Query: 308 VRIDGERSLPFATLVPLVELAREHAGLEFYSLQVGQDAVAQLHAHPLASLVRDCSPELHD 367 + D RS+ FA L PL+++ + F+SLQ G A QL + V D + EL D Sbjct: 430 RKNDARRSIAFARLAPLLDV----PNVRFFSLQKGP-AAQQLESDERGGRVIDYTGELDD 484 Query: 368 FAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSPWYGGMTIF 427 FA+T AL+ANLDL+I+VDTS HLAGAL +PVW+LNR + CWRW +ER D+PWY +F Sbjct: 485 FADTAALVANLDLVISVDTSTAHLAGALDKPVWILNRFDTCWRWMLERTDTPWYPRARLF 544 Query: 428 GQRTAGQWDEVIARVRAALQ 447 Q G WD V+ R AL Sbjct: 545 RQPALGDWDSVMMAARDALN 564 >ref|YP_558015.1| TPR/sulfotransferase domain-containing protein [Burkholderia xenovorans LB400] gb|ABE29963.1| Putative TPR/sulfotransferase domain protein, FlbA-like protein [Burkholderia xenovorans LB400] Length = 577 Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 202/472 (42%), Positives = 268/472 (56%), Gaps = 42/472 (8%) Query: 8 YGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRG 67 + +A S ERA+AL+P F A N GN N+ AL ++DRA+ + PDF +A +NR Sbjct: 95 FDEALASAERALALQPKFPGALNNRGNAQAGLNRPLDALASFDRAIALTPDFAQAWNNRA 154 Query: 68 YVLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDA 127 VL + RPA+AL + D ALAL + PD W NRG+ L + EEA SYRRA L P Sbjct: 155 CVLRDLGRPADALASCDHALALQPAYPDAWSNRGNAFSDLNQPEEAERSYRRALELAPAF 214 Query: 128 GSA----------------------------------TWNEALMQLRQGDFVNGWKGFET 153 A WNE+L L+ G GW+ +E Sbjct: 215 ADAWNNLGLAQIDLNQHAQALSSYERALAANPAAAETHWNESLCLLQMGRLEAGWQKYEW 274 Query: 154 RWATEQMRGQQRQFMQPLWLGEQPLEGKTILLHAEQGFGDTLQFVRYAPLLAAHGARVIL 213 RW +++ +R F QPLWLG+ + GKTILLHAEQG GDTLQF RYA L++ GA+V+L Sbjct: 275 RWERSRIKASRRVFAQPLWLGDFSIGGKTILLHAEQGLGDTLQFCRYAALVSKLGAKVVL 334 Query: 214 EVQPALTRQLAGLPGVTQVIGTDHFMRPPFDFHCPLMSLPLACKTFSEADIPRAPYLLPE 273 EV P L R ++ L GV Q+I + PPFD HCPL+SLPLA KT ++ PYL Sbjct: 335 EVPPELMRLMSTLDGVDQLIEAGEAL-PPFDCHCPLLSLPLAFKTDLDSIPSATPYLYAH 393 Query: 274 ASSWAAWHQRL--PRNRALRVGLVWAGSSAQTHPDAVRIDGERSLPFATLVPLVELAREH 331 A + W R+ + L+VGLVWAG + + + D RS+ F L P++++ Sbjct: 394 AEAARQWRDRIHAQADTHLKVGLVWAGGNRPHVAELRKNDARRSIAFERLAPILDV---- 449 Query: 332 AGLEFYSLQVGQDAVAQLHAHPLASLVRDCSPELHDFAETGALLANLDLLITVDTSVCHL 391 ++F+SLQ G A QL + + D + EL DFA+T AL+ANLDL+I+VDTS HL Sbjct: 450 PNVQFFSLQKGP-AAQQLKSGEWGGRIVDYTEELDDFADTAALVANLDLVISVDTSTAHL 508 Query: 392 AGALGRPVWLLNRHNGCWRWQVEREDSPWYGGMTIFGQRTAGQWDEVIARVR 443 AGAL RPVW+LNR + CWRW +ER D+PWY G +F Q G WD V+ R Sbjct: 509 AGALDRPVWILNRFDTCWRWMLERTDTPWYPGARLFRQPALGDWDSVMQAAR 560 >ref|ZP_03127398.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gb|EDY22437.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 630 Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 194/426 (45%), Positives = 244/426 (57%), Gaps = 8/426 (1%) Query: 23 PDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRGYVLFKMQRPAEALQA 82 PD++EA+ NLGN D LD+A+ RA+E++P+ EA +N G L EA A Sbjct: 207 PDYVEAYCNLGNALVDEGSLDEAVATCRRAIEIRPNHAEAHNNLGVALIAQGALQEAGDA 266 Query: 83 YDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDAGSATWNEALMQLRQG 142 + RAL L + + N TL R +EA RA L+P A A +N +L L QG Sbjct: 267 FRRALELQPNQAESHSNLSVTLMAEGRLDEAGAELCRAIELQPQAAQAKFNYSLQLLLQG 326 Query: 143 DFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEGKTILLHAEQGFGDTLQFVRYAP 202 DF GW +E+RW +R +R F QP+W GE PL G+ +L++AEQG GDTLQFVRYAP Sbjct: 327 DFEQGWPLYESRWGVGDLRFAKRDFPQPMWRGE-PLHGQRVLIYAEQGLGDTLQFVRYAP 385 Query: 203 LLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMRPPFDFHCPLMSLPLACKTFSEA 262 L+A G VILE QP L L GV ++I + P F+ HC +MSLPLA T E Sbjct: 386 LIAERGGHVILECQPELKSLFTSLEGVAEIIVIGDPL-PDFELHCRMMSLPLAFGTRVET 444 Query: 263 DIPRAPYLLPEASSWAAWHQRLPRNRALRVGLVWAGSSAQTHPDAVRIDGERSLPFATLV 322 PYL + + W +RL N AL+VGLVWAG +A RID RS+ L Sbjct: 445 IPATIPYLRADPAGVRRWKERLEGN-ALKVGLVWAGGMRPRQLNADRIDRRRSVLLGQLA 503 Query: 323 PLVELAREHAGLEFYSLQVGQDAVAQLHAHPLASLVRDCSPELHDFAETGALLANLDLLI 382 P E+ G+ F SLQ G A Q P+ + D S EL DFAET AL+ LDL+I Sbjct: 504 PFAEV----PGVVFVSLQKGPPA-EQAKTPPVGMTLLDWSEELRDFAETAALVECLDLVI 558 Query: 383 TVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSPWYGGMTIFGQRTAGQWDEVIARV 442 TVDT+V HLAGALG+PVWLLNR + CWRW + REDSPWY M IF Q G W I + Sbjct: 559 TVDTAVAHLAGALGKPVWLLNRFDTCWRWLLGREDSPWYPTMRIFRQPKFGDWSSAIDQA 618 Query: 443 RAALQQ 448 AAL + Sbjct: 619 SAALAK 624 >ref|ZP_08869415.1| TPR repeat-containing protein I [Azospirillum amazonense Y2] gb|EGY00992.1| TPR repeat-containing protein I [Azospirillum amazonense Y2] Length = 736 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 192/452 (42%), Positives = 254/452 (56%), Gaps = 14/452 (3%) Query: 1 VLHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFF 60 +L+ Y +A + RA+AL P + NLG + A RA+D A++ QPD+ Sbjct: 297 ILYIHGRYAEAESCFARAIALLPGNPKTHNNLGLALLAQGKGAAAARAFDLAIDAQPDYA 356 Query: 61 EAISNRGYVLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRA 120 E +N G L R A + ALAL+ P+ N G+ + + A+ +RRA Sbjct: 357 EPHNNLGMALHAEGRMDLAQASIQAALALNPDYPEALNNLGAVFQAKGELDMAAACFRRA 416 Query: 121 KALKPDAGSATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEG 180 ALKPD G+ N + L G + GW+ +E RW T QM RQF QP W GE G Sbjct: 417 IALKPDYGACHNNLGMSLLAAGQYEEGWREYEWRWRTRQMTPYARQFPQPQWRGED-AAG 475 Query: 181 KTILLHAEQGFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMR 240 KTIL+HAEQG GDTLQF RY PL+AA G R+ L VQP + R L LPGVT ++ + Sbjct: 476 KTILIHAEQGLGDTLQFSRYLPLVAARGLRITLAVQPQVARLLRPLPGVTHILVEGEPL- 534 Query: 241 PPFDFHCPLMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRNRA-LRVGLVWAGS 299 PPFD CP+MSLPLA T E PYL + A W RL + A LR+GL WAG+ Sbjct: 535 PPFDLQCPMMSLPLAFGTTVETIPAEVPYLAADPGDVAVWRDRLAGDGAGLRIGLAWAGN 594 Query: 300 SAQTHPDAVRIDGERSLPFATLVPLVELAREHAGLEFYSLQVGQDAVAQLHAHPLASLVR 359 + P+ +D RS+ L+PL + G+ YSLQ P A + Sbjct: 595 PRRDRPELAAVDRRRSVAPELLMPLSTVP----GMRLYSLQKDDTP-------PAAFPMV 643 Query: 360 DCSPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSP 419 D E+ DFA+T AL+ANLDL+I+VDTSV HLAGALG+PVW++NRH+ CWRW R DSP Sbjct: 644 DHMAEVADFADTAALIANLDLVISVDTSVVHLAGALGKPVWVMNRHDSCWRWFRGRNDSP 703 Query: 420 WYGGMTIFGQRTAGQWDEVIARVRAALQQQLA 451 WY + +F Q G WD V+ VRAAL+++++ Sbjct: 704 WYPTLRLFNQAAPGDWDGVVTDVRAALEERVS 735 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 69/126 (54%) Query: 11 ARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRGYVL 70 A + ++RAVAL+PDF E + NLGN K +L++AL A DRALE++P + EA +NRG V Sbjct: 103 AADCFQRAVALKPDFAEGYNNLGNALKAQGKLEEALAALDRALELRPAYAEAHNNRGVVH 162 Query: 71 FKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDAGSA 130 R AEA + +ALA + + +N G L R EA +A PD A Sbjct: 163 RLQSRWAEAEAGFRQALAAKPAYVNALYNLGLVLRLTGRLAEALPWLEQAVDRAPDHAEA 222 Query: 131 TWNEAL 136 +N L Sbjct: 223 CFNLGL 228 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 63/121 (52%) Query: 17 RAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRGYVLFKMQRP 76 +A+ALRP F EA NLG + ++ A + RA+ ++PDF E +N G L + Sbjct: 75 QALALRPAFPEALNNLGTVREAQGDINAAADCFQRAVALKPDFAEGYNNLGNALKAQGKL 134 Query: 77 AEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDAGSATWNEAL 136 EAL A DRAL L + + NRG R+ EA +R+A A KP +A +N L Sbjct: 135 EEALAALDRALELRPAYAEAHNNRGVVHRLQSRWAEAEAGFRQALAAKPAYVNALYNLGL 194 Query: 137 M 137 + Sbjct: 195 V 195 >ref|YP_378620.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3] gb|ABB27577.1| TPR repeat [Chlorobium chlorochromatii CaD3] Length = 1827 Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 176/453 (38%), Positives = 258/453 (56%), Gaps = 27/453 (5%) Query: 1 VLHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFF 60 VL + + +A SY +A+ L+ ++ AW+N N K+ Q +A+ +Y++A+E QP++ Sbjct: 359 VLKELKRFDEALASYNKALELKENYAAAWYNRANLLKEWKQFSEAIESYNKAIEFQPNYP 418 Query: 61 EAISNRGYVLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRA 120 EA SNRG VL ++++ A +Y++A+AL + + + N+G+ L++L + + A ES+ +A Sbjct: 419 EAYSNRGVVLKELKQFDAAFASYNQAIALKPTYVEAYSNKGTVLKELKQLDAAIESFNKA 478 Query: 121 KALKPDAGSATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEG 180 ALKPD WN++L+ L G+F++GW +E RW +R F QPLWLG++ LE Sbjct: 479 IALKPDYAEVQWNKSLVLLLSGNFIDGWMLYEWRWKKADFTSPKRNFTQPLWLGKESLEH 538 Query: 181 KTILLHAEQGFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMR 240 KTILLH+EQG GDTLQF RYA L+A GARVILEV L L L GV Q+I + Sbjct: 539 KTILLHSEQGLGDTLQFCRYATLVAKRGARVILEVPDILIPLLKQLEGVEQIIAKGKKI- 597 Query: 241 PPFDFHCPLMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRNRALRVGLVWAGSS 300 PPFD+H PL+SLPLA T E + YL + + W QRL R+GLVW+G + Sbjct: 598 PPFDYHTPLLSLPLAFTTRLENIPSPSKYLFIDNNKIEEWKQRLHTIPHPRIGLVWSGRA 657 Query: 301 AQTHPDAVRIDGERSLPFATLV-------PLVELAREHAGLEFYSLQVGQDAVAQLHAHP 353 + D RS+ A L+ V L +E + +L V + V Sbjct: 658 EHKN------DHNRSIALADLLRYLPNKYHYVSLQKEVRDSDKKTLDVTSNMV------- 704 Query: 354 LASLVRDCSPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQV 413 ELHDFA+T AL +DL+I+VDTSV HL+ +LG+P W+L WRW + Sbjct: 705 ------HFGNELHDFADTAALCELMDLVISVDTSVAHLSASLGKPTWILLPFIPDWRWLL 758 Query: 414 EREDSPWYGGMTIFGQRTAGQWDEVIARVRAAL 446 +R D+PWY T++ Q T W+ V+ + L Sbjct: 759 DRNDTPWYASATLYRQHTRDDWESVLKNIATDL 791 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 170/443 (38%), Positives = 251/443 (56%), Gaps = 13/443 (2%) Query: 8 YGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRG 67 + A +SYE+A+AL+PD+ EA+ N GN + + ++A+ +Y++A+ ++P + EA SNRG Sbjct: 1393 FDAALKSYEKAIALKPDYTEAYCNRGNALQLLKRFNEAIDSYNKAIALKPQYAEAYSNRG 1452 Query: 68 YVLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDA 127 V +++ +L +++A+ L + + NRG +L + A + +A LK D Sbjct: 1453 VVFRELKELDTSLDNFNKAIELKADYAEAYSNRGVVFRELKMLDNALADFNKAIELKKDY 1512 Query: 128 GSATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEGKTILLHA 187 A WN++L+ L G+F GW+ +E RW +R F QPLWLGE+ + KTILLH+ Sbjct: 1513 AIAYWNKSLVLLLLGNFAEGWQCYEWRWKKADFTSPKRNFTQPLWLGEESIADKTILLHS 1572 Query: 188 EQGFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMRPPFDFHC 247 EQG GDT+QF RYAPL+A GARV+LE+ +L L L GV +VI + PPFD+HC Sbjct: 1573 EQGLGDTIQFCRYAPLVAELGARVVLEIPSSLALLLQPLDGVAEVIVKGKTL-PPFDYHC 1631 Query: 248 PLMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRNRALRVGLVWAGSSAQTHPDA 307 PL+SLPLA KT E YL + W QR+ R+GLVW+GS+ + Sbjct: 1632 PLLSLPLAFKTTLETIPFPTKYLSLPSHKIKQWQQRIGNIAKPRIGLVWSGSTKHKN--- 1688 Query: 308 VRIDGERSLPFATLVPLVELAREHAGLEFYSLQVGQDAVAQLHAHPLASLVRDCSPELHD 367 D RS+ L L+E +H + SLQ + A++V ELHD Sbjct: 1689 ---DHNRSI---ELSKLLEYLPDH--YHYISLQKELRESDKATLEATANMVH-FGDELHD 1739 Query: 368 FAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSPWYGGMTIF 427 F +T AL ++L+I+VDTSV HLA ALG+P W+L WRW ++R D+PWY T++ Sbjct: 1740 FTDTAALCELVELVISVDTSVAHLAAALGKPTWILLPFIPDWRWLLDRNDTPWYASATLY 1799 Query: 428 GQRTAGQWDEVIARVRAALQQQL 450 Q T W + R+ L+Q+ Sbjct: 1800 RQHTRDDWTAALERLHEDLRQRF 1822 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 164/448 (36%), Positives = 243/448 (54%), Gaps = 13/448 (2%) Query: 2 LHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFE 61 LH S +A Y+ + L+P+ ++A LG Q ++AL ++A+ + DF Sbjct: 821 LHQSGKQNEAAICYKNIIQLQPNHVDALHLLGVVAFQKEQYNEALNLLNQAIALNTDFAS 880 Query: 62 AISNRGYVLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAK 121 A NRG V + +AL+ +DRAL L + + + RG+ L++L A SY A Sbjct: 881 AYFNRGLVFKNLYHFDKALEDFDRALRLKPNYAEAYHKRGNILKELGLITAALSSYNNAL 940 Query: 122 ALKPDAGSATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEGK 181 ALK D ++A++ L G+F +GW +E RW + + QR F QPLWLG++ ++ K Sbjct: 941 ALKADYAGVYLDKAIILLLLGNFADGWDIYEWRWKCKDLPLVQRNFTQPLWLGQKDIQSK 1000 Query: 182 TILLHAEQGFGDTLQFVRYAPLLAAHGARVILEVQPALTRQLAGLPGVTQVIGTDHFMRP 241 TILLH+EQG GDT+QF RY L+A GA VILEV +L + L GVT+++ + P Sbjct: 1001 TILLHSEQGLGDTIQFCRYTQLVAERGALVILEVPASLASLMQSLEGVTEIVVKGKKL-P 1059 Query: 242 PFDFHCPLMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRNRALRVGLVWAGSSA 301 PFD HCPL+SLPLAC T E + YL W RL R+GLVW+GS+ Sbjct: 1060 PFDCHCPLLSLPLACNTTLENIPSPSKYLSSNTKKRNKWKDRLQAIPQPRIGLVWSGSTQ 1119 Query: 302 QTHPDAVRIDGERSLPFATLVPLVELAREHAGLEFYSLQVGQDAVAQLHAHPLASLVRDC 361 + D RS+ + L+ + A + L+ ++ + A + A S + Sbjct: 1120 HKN------DRNRSIELSELLQYLPDAYHYISLQ---KELRESDKATVEA---TSNIVHF 1167 Query: 362 SPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDSPWY 421 LHDFA+T AL +D++I+VDTSV HL+ ALG+P W+L + WRW ++R D+PWY Sbjct: 1168 GDALHDFADTAALCELVDIVISVDTSVAHLSAALGKPTWILLPYIPDWRWLLDRNDTPWY 1227 Query: 422 GGMTIFGQRTAGQWDEVIARVRAALQQQ 449 T++ Q W V R++ LQQ+ Sbjct: 1228 ASATLYRQAHRDDWLSVFKRLQEDLQQR 1255 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 80/130 (61%) Query: 8 YGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFEAISNRG 67 Y + E +A+A++ DF A+FN G K+ +Q ++A+ +++A+E +P++ A +RG Sbjct: 1325 YSQSLELLNQAIAIKSDFASAYFNRGLVLKNLSQFEKAIEDFNKAIEQKPEYASAYHSRG 1384 Query: 68 YVLFKMQRPAEALQAYDRALALDESAPDLWFNRGSTLEQLYRFEEASESYRRAKALKPDA 127 V ++++ AL++Y++A+AL + + NRG+ L+ L RF EA +SY +A ALKP Sbjct: 1385 TVQKELKQFDAALKSYEKAIALKPDYTEAYCNRGNALQLLKRFNEAIDSYNKAIALKPQY 1444 Query: 128 GSATWNEALM 137 A N ++ Sbjct: 1445 AEAYSNRGVV 1454