BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0353.p (220 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775731.1| metal ion ABC transporter permease [Herbaspi... 384 e-105 ref|YP_001562807.1| binding-protein-dependent transport systems ... 348 3e-94 ref|YP_004235621.1| binding-protein-dependent transport systems ... 327 9e-88 ref|ZP_08405095.1| binding-protein-dependent transport systems i... 307 7e-82 ref|ZP_08666361.1| binding-protein-dependent transport systems i... 278 3e-73 ref|YP_002008050.1| methionine transport protein, ABC transport,... 277 8e-73 ref|YP_001187856.1| binding-protein-dependent transport systems ... 276 2e-72 ref|YP_002541494.1| amino acid ABC transporter [Agrobacterium ra... 276 2e-72 ref|YP_004474532.1| binding-protein-dependent transport systems ... 273 1e-71 ref|YP_002539630.1| ABC transporter membrane spanning protein [A... 272 2e-71 >ref|YP_003775731.1| metal ion ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63823.1| ABC-type metal ion transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 199 Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%) Query: 22 MVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIVLLVALIPL 81 MVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIVLLVALIPL Sbjct: 1 MVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRATPFIVLLVALIPL 60 Query: 82 TRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRKWDIVWHVY 141 TRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRKWDIVWHVY Sbjct: 61 TRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQALGCRKWDIVWHVY 120 Query: 142 LPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMVIVIAMLIV 201 LPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMVIVIAMLIV Sbjct: 121 LPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDTQVMVIVIAMLIV 180 Query: 202 LVSLVQRTGDSYVRRLRNR 220 LVSLVQRTGDSYVRRLRNR Sbjct: 181 LVSLVQRTGDSYVRRLRNR 199 >ref|YP_001562807.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] ref|YP_004490187.1| ABC transporter integral membrane protein [Delftia sp. Cs1-4] gb|ABX34422.1| binding-protein-dependent transport systems inner membrane component [Delftia acidovorans SPH-1] gb|EEE71494.1| predicted protein [Populus trichocarpa] gb|AEF91832.1| ABC-type transporter, integral membrane subunit [Delftia sp. Cs1-4] Length = 220 Score = 348 bits (893), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 192/220 (87%), Positives = 203/220 (92%) Query: 1 MSLTLSIPIERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLG 60 MSL LSIPIERYGNAL DTL MV VSG +AL AG+PLAVLLIV+APGGFL PR HR LG Sbjct: 1 MSLNLSIPIERYGNALADTLMMVGVSGGIALAAGIPLAVLLIVTAPGGFLASPRTHRALG 60 Query: 61 SVINGFRATPFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDP 120 SVINGFRATPFIVLLVALIP TRLV GTTIGVWAAIVPLAISATPFFARIVEVSLREVDP Sbjct: 61 SVINGFRATPFIVLLVALIPFTRLVTGTTIGVWAAIVPLAISATPFFARIVEVSLREVDP 120 Query: 121 GLVEAAQALGCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAI 180 GL+EAAQA+GCRKWDIV HVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAI Sbjct: 121 GLIEAAQAMGCRKWDIVRHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAI 180 Query: 181 RYGYQRFDTQVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 RYGYQRFDTQVM++VIA+LI LV++VQ GD YVRRLR+R Sbjct: 181 RYGYQRFDTQVMLLVIAVLIALVTVVQVLGDRYVRRLRSR 220 >ref|YP_004235621.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47054.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] Length = 220 Score = 327 bits (838), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 185/220 (84%), Positives = 197/220 (89%) Query: 1 MSLTLSIPIERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLG 60 MSL+LSIP ERYG AL DTL MV VSG A +AG+PLA+LLIV+APGGFL PR+HRV G Sbjct: 1 MSLSLSIPAERYGQALADTLLMVGVSGTAAFLAGIPLALLLIVTAPGGFLASPRVHRVAG 60 Query: 61 SVINGFRATPFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDP 120 SVINGFRATPFIVLLVALIP TRLVAGTTIGVWAAIVPL+ISATPFFARI EVSLREVD Sbjct: 61 SVINGFRATPFIVLLVALIPFTRLVAGTTIGVWAAIVPLSISATPFFARIAEVSLREVDR 120 Query: 121 GLVEAAQALGCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAI 180 GLVEAAQA+GCRKW IV HVYLPEALPGIVGGFTITLVALI +SAMAGAVGAGGLGDLAI Sbjct: 121 GLVEAAQAMGCRKWHIVRHVYLPEALPGIVGGFTITLVALIGASAMAGAVGAGGLGDLAI 180 Query: 181 RYGYQRFDTQVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 RYGYQRFDTQVMVIVIA+LI LV+ VQ GD VRRLR+R Sbjct: 181 RYGYQRFDTQVMVIVIAVLIALVTAVQSAGDFCVRRLRDR 220 >ref|ZP_08405095.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] gb|EGI77716.1| binding-protein-dependent transport systems inner membrane component [Hylemonella gracilis ATCC 19624] Length = 220 Score = 307 bits (787), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 175/220 (79%), Positives = 193/220 (87%) Query: 1 MSLTLSIPIERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLG 60 MS TLSIP ERY A LDTL MV VS ++A VAGVPLAVLLIV+AP GFL PR++RV+G Sbjct: 1 MSWTLSIPFERYLQAFLDTLMMVGVSASIAFVAGVPLAVLLIVTAPSGFLPSPRVNRVVG 60 Query: 61 SVINGFRATPFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDP 120 SVINGFRATPFIVLLVALIP TR+VAGTTIGVWAAIVPLAISATPFFARI EVSLREV+ Sbjct: 61 SVINGFRATPFIVLLVALIPFTRVVAGTTIGVWAAIVPLAISATPFFARIAEVSLREVEA 120 Query: 121 GLVEAAQALGCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAI 180 GL+EAAQA+GC++W IV HV LPEALPGIVGGFTIT+V+LI +SAMAGAVGAGGLGDLAI Sbjct: 121 GLIEAAQAMGCKRWHIVRHVLLPEALPGIVGGFTITVVSLIGASAMAGAVGAGGLGDLAI 180 Query: 181 RYGYQRFDTQVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 RYGYQRFDTQVMV+VIA+LI LV+LVQ GD R LR R Sbjct: 181 RYGYQRFDTQVMVLVIAVLIALVTLVQFAGDRLARWLRER 220 >ref|ZP_08666361.1| binding-protein-dependent transport systems inner membrane component [Paracoccus sp. TRP] Length = 218 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 154/212 (72%), Positives = 183/212 (86%) Query: 9 IERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRA 68 ++R AL DT+ MVSVS +A++AG+PLAV L+ S G PRL+R++G+V+NGFRA Sbjct: 7 VDRLQQALWDTVLMVSVSAGIAVLAGIPLAVFLVTSGSDGIFPAPRLNRIIGTVVNGFRA 66 Query: 69 TPFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQA 128 PFIVLLVALIP TRLVAGTTIGVWAAIVPL++SATPFFARI EVSLREVDPGLVEAAQ+ Sbjct: 67 VPFIVLLVALIPFTRLVAGTTIGVWAAIVPLSVSATPFFARIAEVSLREVDPGLVEAAQS 126 Query: 129 LGCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFD 188 +GCR+WDIV HV LPEALPGI GGFTIT+V++I +SAMAGAVGAGGLGD+AIRYGYQRFD Sbjct: 127 IGCRRWDIVRHVLLPEALPGIAGGFTITVVSMIGASAMAGAVGAGGLGDVAIRYGYQRFD 186 Query: 189 TQVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 T VM++VIA+LI+LVS VQ +GD VRRL+ R Sbjct: 187 TTVMLVVIAILILLVSAVQFSGDHAVRRLKAR 218 >ref|YP_002008050.1| methionine transport protein, ABC transport, inner membrane component [Cupriavidus taiwanensis LMG 19424] emb|CAQ71994.1| methionine transport protein, ABC transport, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 217 Score = 277 bits (708), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 156/212 (73%), Positives = 179/212 (84%) Query: 9 IERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRA 68 IER LDTL MV S A+A++AGVPLA++L+V+APGG PRLHRVLGSV+N FRA Sbjct: 6 IERLWQGFLDTLTMVGASAAIAVLAGVPLALVLVVTAPGGMRPAPRLHRVLGSVVNSFRA 65 Query: 69 TPFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQA 128 TPFIVLLVAL+P TRLV G TIGVWAA+VPLA+SATPFFARI E+SLREVD GLVEAAQA Sbjct: 66 TPFIVLLVALLPFTRLVVGATIGVWAAVVPLAVSATPFFARIAEISLREVDAGLVEAAQA 125 Query: 129 LGCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFD 188 +GCR+ I+ HV LPEALPGIVGGFTIT+V+LI +SAMAGAVGAGGLGDLAIRYGYQRFD Sbjct: 126 MGCRRRHILLHVLLPEALPGIVGGFTITVVSLIGASAMAGAVGAGGLGDLAIRYGYQRFD 185 Query: 189 TQVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 T VM +VI +LI LV++VQ +GD V RLR R Sbjct: 186 TTVMAVVIVILIALVTVVQASGDRLVHRLRER 217 >ref|YP_001187856.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] gb|ABP85124.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas mendocina ymp] Length = 217 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 147/216 (68%), Positives = 181/216 (83%) Query: 5 LSIPIERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVIN 64 +S+ ++R LLDTL MV VS LAL+AG+PLAV L+ S+ GG + PRL++VLG+++N Sbjct: 1 MSLLLDRLWQGLLDTLLMVGVSSLLALLAGIPLAVFLVTSSKGGIFEAPRLNQVLGAIVN 60 Query: 65 GFRATPFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVE 124 FR+ PF++L+VALIP TRL+ GTT GVWAA+VPL I+ATPFFARI EVSLREVD GL+E Sbjct: 61 LFRSIPFLILMVALIPFTRLIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIE 120 Query: 125 AAQALGCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGY 184 AAQA+GCR+W IVWHV LPEALPGIVGGFTITLV +I+SSAMAGA+GAGGLGDLA RYGY Sbjct: 121 AAQAMGCRRWHIVWHVLLPEALPGIVGGFTITLVTMINSSAMAGAIGAGGLGDLAYRYGY 180 Query: 185 QRFDTQVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 QRFD+QVM+ VI L+VLVSL+Q +GD +RL +R Sbjct: 181 QRFDSQVMLTVIVALVVLVSLIQFSGDRLAKRLNHR 216 >ref|YP_002541494.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gb|ACM29897.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 217 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/211 (73%), Positives = 178/211 (84%) Query: 10 ERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRAT 69 ER ALLDT+ MV VS AL G+PLAV L++S PGG + PRL+RVL ++INGFRAT Sbjct: 7 ERLWQALLDTIVMVGVSAVFALAIGIPLAVFLVLSGPGGLIHAPRLNRVLAALINGFRAT 66 Query: 70 PFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQAL 129 PFIVLLVAL+PLTRL+ GTTIGVWAAIVPL+ISATPFFARI EVSLREVD GL+EAAQA+ Sbjct: 67 PFIVLLVALLPLTRLLTGTTIGVWAAIVPLSISATPFFARIAEVSLREVDAGLIEAAQAI 126 Query: 130 GCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDT 189 GCR+W IV HV LPEALPGIVGGFTIT+V++I +SAMAGA+GAGGLGD+AIRYGYQR+DT Sbjct: 127 GCRRWHIVRHVLLPEALPGIVGGFTITIVSMIGASAMAGAIGAGGLGDMAIRYGYQRYDT 186 Query: 190 QVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 VM +VI +LI LV LVQ TGD V RLR R Sbjct: 187 MVMAMVIVVLIALVCLVQFTGDYAVSRLRAR 217 >ref|YP_004474532.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas fulva 12-X] gb|AEF22438.1| binding-protein-dependent transport systems inner membrane component [Pseudomonas fulva 12-X] Length = 217 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 149/216 (68%), Positives = 179/216 (82%) Query: 5 LSIPIERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVIN 64 +S+ ER LLDTL MV VS LAL+AG+PLAV L+ S+ GG + PRL+RVLG+++N Sbjct: 1 MSLLFERLWQGLLDTLLMVGVSSLLALLAGIPLAVFLVTSSRGGIFEAPRLNRVLGAIVN 60 Query: 65 GFRATPFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVE 124 FR+ PF++L+VALIP TRLV GTT GVWAA+VPL I+ATPFFARI EVSLREVD GL+E Sbjct: 61 LFRSVPFLILMVALIPFTRLVVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIE 120 Query: 125 AAQALGCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGY 184 AAQA+GCR+ IVWHV LPEALPGIVGGFTITLV +I+SSAMAGA+GAGGLGDLA RYGY Sbjct: 121 AAQAMGCRRRHIVWHVLLPEALPGIVGGFTITLVTMINSSAMAGAIGAGGLGDLAYRYGY 180 Query: 185 QRFDTQVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 QRFD+QVM+ VI L+VLVSL+Q +GD +RL +R Sbjct: 181 QRFDSQVMLTVIVALVVLVSLIQLSGDRLAKRLNHR 216 >ref|YP_002539630.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gb|ACM39925.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 217 Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 149/211 (70%), Positives = 178/211 (84%) Query: 10 ERYGNALLDTLQMVSVSGALALVAGVPLAVLLIVSAPGGFLDWPRLHRVLGSVINGFRAT 69 ER G A LDT+ MV +S ALV G+PLAV L++S+PGG ++ PR +R+LG++INGFRAT Sbjct: 7 ERLGRAFLDTITMVGISALFALVVGIPLAVFLVLSSPGGLIEAPRTNRILGALINGFRAT 66 Query: 70 PFIVLLVALIPLTRLVAGTTIGVWAAIVPLAISATPFFARIVEVSLREVDPGLVEAAQAL 129 PFIVL+VAL+P TRLV GTTIGVWAAIVPL+ISATPFFARI EVSLREVD GL+EAAQA+ Sbjct: 67 PFIVLMVALLPFTRLVTGTTIGVWAAIVPLSISATPFFARIAEVSLREVDHGLIEAAQAI 126 Query: 130 GCRKWDIVWHVYLPEALPGIVGGFTITLVALISSSAMAGAVGAGGLGDLAIRYGYQRFDT 189 GCR+W I+ HV L E+LPG+VGGFTIT+V +I +SAMAGAVGAGGLGD+AIRYGYQRFDT Sbjct: 127 GCRRWHIIRHVLLTESLPGLVGGFTITIVTMIGASAMAGAVGAGGLGDMAIRYGYQRFDT 186 Query: 190 QVMVIVIAMLIVLVSLVQRTGDSYVRRLRNR 220 VM+ VI +LI V LVQ TGD VRRL+ + Sbjct: 187 TVMIAVIIVLIATVCLVQFTGDLIVRRLQAQ 217