BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0349.p (206 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775728.1| hypothetical protein Hsero_2321 [Herbaspiril... 426 e-117 ref|ZP_07676812.1| 4-carboxymuconolactone decarboxylase domain p... 328 3e-88 ref|YP_002981359.1| hypothetical protein Rpic12D_1399 [Ralstonia... 326 1e-87 ref|YP_001898909.1| hypothetical protein Rpic_1334 [Ralstonia pi... 325 3e-87 ref|YP_002496477.1| carboxymuconolactone decarboxylase [Methylob... 293 1e-77 ref|YP_001768222.1| hypothetical protein M446_1268 [Methylobacte... 278 3e-73 ref|YP_001753288.1| hypothetical protein Mrad2831_0594 [Methylob... 269 2e-70 ref|YP_001756638.1| hypothetical protein Mrad2831_3981 [Methylob... 187 6e-46 ref|NP_941172.1| hypothetical protein SMR0099 [Serratia marcesce... 178 4e-43 ref|YP_002239089.1| hypothetical protein KPK_3264 [Klebsiella pn... 170 1e-40 >ref|YP_003775728.1| hypothetical protein Hsero_2321 [Herbaspirillum seropedicae SmR1] gb|ADJ63820.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 206 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/206 (99%), Positives = 206/206 (100%) Query: 1 MNKALTMTIASTLLAGSLAQAADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLM 60 MNKALTMTIASTLLAGSLAQAADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLM Sbjct: 1 MNKALTMTIASTLLAGSLAQAADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLM 60 Query: 61 HSPQVMTQARAMGDYLRYHSAIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEI 120 HSPQVMTQARAMGDYLRYHSAIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEI Sbjct: 61 HSPQVMTQARAMGDYLRYHSAIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEI 120 Query: 121 AAAIADGRRPEGMSEDETIVYDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYY 180 AAAIADGRRPEGMSE+ETIVYDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYY Sbjct: 121 AAAIADGRRPEGMSEEETIVYDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYY 180 Query: 181 TLLAMQMNAAQYQAPKDAKRLVRFPE 206 TLLAMQMNAAQYQAPKDAKRLVRFPE Sbjct: 181 TLLAMQMNAAQYQAPKDAKRLVRFPE 206 >ref|ZP_07676812.1| 4-carboxymuconolactone decarboxylase domain protein [Ralstonia sp. 5_7_47FAA] gb|EFP64815.1| 4-carboxymuconolactone decarboxylase domain protein [Ralstonia sp. 5_7_47FAA] Length = 207 Score = 328 bits (841), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 153/206 (74%), Positives = 176/206 (85%) Query: 1 MNKALTMTIASTLLAGSLAQAADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLM 60 M LT+ + L+ + A AA+RLP IPP++Y+ EQ +AA +F AARKVPVFGPFEPLM Sbjct: 1 MKNVLTLLSTAALVLMTSAHAAERLPTIPPDKYSAEQTKAAQDFQAARKVPVFGPFEPLM 60 Query: 61 HSPQVMTQARAMGDYLRYHSAIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEI 120 HSP+VM+QARAMGDYLRYHSAIGNTLSELVILITAREW+QDYEWYVH+PIA+KAGIKP I Sbjct: 61 HSPEVMSQARAMGDYLRYHSAIGNTLSELVILITAREWSQDYEWYVHHPIALKAGIKPGI 120 Query: 121 AAAIADGRRPEGMSEDETIVYDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYY 180 A AIADGRRP GMSEDE IVYDF+ EL RNKRVSDQT+ RAEKRFG KG+VD+TG+ YY Sbjct: 121 ADAIADGRRPTGMSEDEEIVYDFATELIRNKRVSDQTYTRAEKRFGNKGIVDMTGICGYY 180 Query: 181 TLLAMQMNAAQYQAPKDAKRLVRFPE 206 TLLAM+MN AQY APK+A +L RFPE Sbjct: 181 TLLAMEMNVAQYPAPKNAAKLARFPE 206 >ref|YP_002981359.1| hypothetical protein Rpic12D_1399 [Ralstonia pickettii 12D] gb|ACS62687.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 207 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 152/206 (73%), Positives = 174/206 (84%) Query: 1 MNKALTMTIASTLLAGSLAQAADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLM 60 M LT+ + ++ + A AA+RLP IPP++Y EQ +AA +F AARKVPVFGPFEPLM Sbjct: 1 MKNVLTLLSTAAMVLMTSAHAAERLPTIPPDKYNAEQTKAAQDFQAARKVPVFGPFEPLM 60 Query: 61 HSPQVMTQARAMGDYLRYHSAIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEI 120 HSP+VM+QARAMGDYLRYHSAIGNTLSELVILITAREW+QDYEWYVH+PIA+KAGIKP I Sbjct: 61 HSPEVMSQARAMGDYLRYHSAIGNTLSELVILITAREWSQDYEWYVHHPIALKAGIKPGI 120 Query: 121 AAAIADGRRPEGMSEDETIVYDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYY 180 A AIADGRRP GMSEDE IVYDF+ EL RNKRVSDQT+ RAEKRFG KG+VD+TG+ YY Sbjct: 121 ADAIADGRRPTGMSEDEEIVYDFATELIRNKRVSDQTYTRAEKRFGNKGIVDMTGICGYY 180 Query: 181 TLLAMQMNAAQYQAPKDAKRLVRFPE 206 TLLAM+MN AQY APK A +L RFPE Sbjct: 181 TLLAMEMNVAQYPAPKSATKLARFPE 206 >ref|YP_001898909.1| hypothetical protein Rpic_1334 [Ralstonia pickettii 12J] gb|ACD26477.1| conserved hypothetical protein [Ralstonia pickettii 12J] Length = 207 Score = 325 bits (832), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 151/206 (73%), Positives = 175/206 (84%) Query: 1 MNKALTMTIASTLLAGSLAQAADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLM 60 M LT+ + L+ + A AA+RLP IPP++Y EQ +AA +F AARKVPVFGPFEPLM Sbjct: 1 MKNVLTLLSTAALVLMTSAHAAERLPTIPPDKYNAEQTKAAQDFQAARKVPVFGPFEPLM 60 Query: 61 HSPQVMTQARAMGDYLRYHSAIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEI 120 HSP+VM+QARAMGDYLRYHSAIGNTLSELVILITAREW+QDYEWYVH+PIA+KAGIKP I Sbjct: 61 HSPEVMSQARAMGDYLRYHSAIGNTLSELVILITAREWSQDYEWYVHHPIALKAGIKPGI 120 Query: 121 AAAIADGRRPEGMSEDETIVYDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYY 180 A AIADGRRP GMSEDE IVYDF+ EL RNKRV+D+T+ RAEKRFG KG+VD+TG+ YY Sbjct: 121 ADAIADGRRPTGMSEDEEIVYDFATELIRNKRVADETYTRAEKRFGNKGIVDMTGICGYY 180 Query: 181 TLLAMQMNAAQYQAPKDAKRLVRFPE 206 TLLAM+MN AQY APK+A +L RFPE Sbjct: 181 TLLAMEMNVAQYPAPKNAAKLARFPE 206 >ref|YP_002496477.1| carboxymuconolactone decarboxylase [Methylobacterium nodulans ORS 2060] gb|ACL56174.1| Carboxymuconolactone decarboxylase [Methylobacterium nodulans ORS 2060] Length = 236 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 140/201 (69%), Positives = 157/201 (78%) Query: 6 TMTIASTLLAGSLAQAADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLMHSPQV 65 T + L ++A A DRLP IPP+QYTPEQK+AA+EF AARKV VFGPFEPLMHSP+V Sbjct: 36 TQACLALCLLSTVALAQDRLPTIPPDQYTPEQKKAAEEFEAARKVKVFGPFEPLMHSPEV 95 Query: 66 MTQARAMGDYLRYHSAIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEIAAAIA 125 MT RAMGDYLRY IG LSELVILI AR WTQDYEWYVH PIA K GI PE+ AAI Sbjct: 96 MTLTRAMGDYLRYKPKIGTRLSELVILINARLWTQDYEWYVHAPIAAKVGIAPEVIAAIR 155 Query: 126 DGRRPEGMSEDETIVYDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYYTLLAM 185 DGRRP G+SEDE IVYDF+ EL +N+RVSD TFARAE+RFGK GVVDLT ++ YYT LAM Sbjct: 156 DGRRPTGLSEDEEIVYDFTTELQQNRRVSDATFARAEQRFGKPGVVDLTAISGYYTFLAM 215 Query: 186 QMNAAQYQAPKDAKRLVRFPE 206 Q+NAA+Y PKD L R PE Sbjct: 216 QLNAARYGIPKDGTPLPRLPE 236 >ref|YP_001768222.1| hypothetical protein M446_1268 [Methylobacterium sp. 4-46] gb|ACA15788.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 204 Score = 278 bits (711), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 132/184 (71%), Positives = 146/184 (79%) Query: 23 DRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLMHSPQVMTQARAMGDYLRYHSAI 82 DRLP IPP+QYTPEQ++AA+EF AARKV VFGPFEPLMHSP+VMT R MGDYLRY I Sbjct: 21 DRLPTIPPDQYTPEQRKAAEEFEAARKVKVFGPFEPLMHSPEVMTLTRQMGDYLRYKPKI 80 Query: 83 GNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEIAAAIADGRRPEGMSEDETIVYD 142 G TLSELVILI AR W+QDYEWYVH PIA K GI PEI AI DGRRPEG+S DE IVYD Sbjct: 81 GTTLSELVILINARHWSQDYEWYVHAPIARKVGIAPEIIEAIRDGRRPEGLSADEAIVYD 140 Query: 143 FSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYYTLLAMQMNAAQYQAPKDAKRLV 202 F+ EL +NKRVSD TFARAE RFGK GVVDL ++ YYT LAM++NAA+Y P D L Sbjct: 141 FTTELQQNKRVSDATFARAESRFGKAGVVDLAAISGYYTFLAMELNAARYGLPPDGTPLP 200 Query: 203 RFPE 206 R PE Sbjct: 201 RLPE 204 >ref|YP_001753288.1| hypothetical protein Mrad2831_0594 [Methylobacterium radiotolerans JCM 2831] gb|ACB22605.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM 2831] Length = 211 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 129/188 (68%), Positives = 147/188 (78%) Query: 19 AQAADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLMHSPQVMTQARAMGDYLRY 78 A+A DRLP IPP+ YTPEQ+QAA+ F AR P FGPFEPLM+SP+VMT AR+MGDYLR+ Sbjct: 24 ARAQDRLPTIPPQDYTPEQRQAAEAFAQARGKPPFGPFEPLMYSPEVMTLARSMGDYLRF 83 Query: 79 HSAIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEIAAAIADGRRPEGMSEDET 138 IG TLSELVIL+TAR WTQDYEWYVH PIA KAGI EI AAI DGRRP MS+DET Sbjct: 84 KPKIGTTLSELVILMTARRWTQDYEWYVHAPIAEKAGISAEIIAAIRDGRRPAKMSDDET 143 Query: 139 IVYDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYYTLLAMQMNAAQYQAPKDA 198 +VYDF+ EL +RVSD TFARAE RFGK GVVDL ++ YYT LAM++NAA+Y P D Sbjct: 144 LVYDFTAELQDTRRVSDATFARAEARFGKPGVVDLAAISGYYTFLAMELNAARYPIPADG 203 Query: 199 KRLVRFPE 206 K L R PE Sbjct: 204 KPLPRMPE 211 >ref|YP_001756638.1| hypothetical protein Mrad2831_3981 [Methylobacterium radiotolerans JCM 2831] gb|ACB25955.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM 2831] Length = 195 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 93/171 (54%), Positives = 120/171 (70%) Query: 21 AADRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLMHSPQVMTQARAMGDYLRYHS 80 +A+R+P IP +P Q +AA F A R VPVFGPF PL+ SP++M A MG YLRY S Sbjct: 7 SAERMPEIPDGSLSPAQAEAAAAFRAERGVPVFGPFVPLLRSPELMLCASRMGQYLRYGS 66 Query: 81 AIGNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEIAAAIADGRRPEGMSEDETIV 140 + +SE IL+ AREW+Q EW +H+PIA+KAG+ PE A A+A+GRRP+ MS DE + Sbjct: 67 VLPLRISEFAILVVAREWSQPVEWAIHHPIALKAGVAPETAQALAEGRRPDTMSADEALA 126 Query: 141 YDFSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYYTLLAMQMNAAQ 191 Y FS EL RN+ VSD T+A RFG++G +DLTG+N YY LLAM MN A+ Sbjct: 127 YAFSTELTRNRAVSDATYAALVARFGEQGAIDLTGINGYYALLAMTMNVAR 177 >ref|NP_941172.1| hypothetical protein SMR0099 [Serratia marcescens] ref|YP_001338800.1| hypothetical protein KPN_pKPN5p08190 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] emb|CAE51627.1| hypothetical protein SMR0099 [Serratia marcescens] gb|ABR80570.1| hypothetical protein KPN_pKPN5p08190 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 183 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 83/173 (47%), Positives = 119/173 (68%) Query: 23 DRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLMHSPQVMTQARAMGDYLRYHSAI 82 +RLP + +Q++ EQ+Q A+E + + + PFEPL+ SP++M A+ MG+YLRY SA+ Sbjct: 2 NRLPALSEQQWSDEQRQLAEEIINGPRGALLPPFEPLLRSPELMAHAQRMGEYLRYRSAL 61 Query: 83 GNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEIAAAIADGRRPEGMSEDETIVYD 142 G LSEL IL+TAR W+Q EW +H PIA + GI + AI + R+PE ++ DE +VY Sbjct: 62 GQRLSELAILLTARHWSQPVEWAIHAPIAREKGIPAQAVQAINERRQPEALAADEWVVYH 121 Query: 143 FSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYYTLLAMQMNAAQYQAP 195 F +LH++K+VSD T+ +A +G+KGVVDL GVN YY+ L+M MN AQ P Sbjct: 122 FCQQLHQHKKVSDDTWQQAIDLWGEKGVVDLIGVNGYYSFLSMIMNGAQTPVP 174 >ref|YP_002239089.1| hypothetical protein KPK_3264 [Klebsiella pneumoniae 342] ref|ZP_06552163.1| hypothetical protein HMPREF0485_04567 [Klebsiella sp. 1_1_55] gb|ACI07498.1| conserved hypothetical protein [Klebsiella pneumoniae 342] gb|EFD82684.1| hypothetical protein HMPREF0485_04567 [Klebsiella sp. 1_1_55] Length = 184 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 79/179 (44%), Positives = 115/179 (64%) Query: 23 DRLPVIPPEQYTPEQKQAADEFLAARKVPVFGPFEPLMHSPQVMTQARAMGDYLRYHSAI 82 +RLP + +++ Q+Q A+E + + + PFEPL+ SP++M A+ MG+YLRY SA+ Sbjct: 3 NRLPPLAEQEWDERQRQLAEEIINGPRGALLPPFEPLLRSPELMAHAQRMGEYLRYRSAL 62 Query: 83 GNTLSELVILITAREWTQDYEWYVHYPIAIKAGIKPEIAAAIADGRRPEGMSEDETIVYD 142 G LSEL IL+TAR W+Q EW +H PIA + GI AI R P+ + DE ++YD Sbjct: 63 GQRLSELAILLTARHWSQPVEWAIHAPIAREKGISAAAVRAIKQRRPPDDLRSDEQVIYD 122 Query: 143 FSIELHRNKRVSDQTFARAEKRFGKKGVVDLTGVNSYYTLLAMQMNAAQYQAPKDAKRL 201 F +LH+ ++VSD T+ +A +G+KGVVDL G+N YY+ L+M MN+AQ P L Sbjct: 123 FCQQLHQQQKVSDSTWQQAVDLWGEKGVVDLIGINGYYSFLSMVMNSAQTPVPDTTDSL 181