BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0343.p (144 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775722.1| transmembrane protein [Herbaspirillum serope... 271 2e-71 ref|YP_551620.1| hypothetical protein Bpro_4846 [Polaromonas sp.... 181 3e-44 gb|ADP97543.1| protein of unknown function, YeeE/YedE [Marinobac... 181 3e-44 emb|CBY25857.1| putative transmembrane protein [Yersinia enteroc... 179 9e-44 ref|ZP_08273905.1| putative transmembrane protein [Oxalobacterac... 179 9e-44 ref|YP_001352148.1| hypothetical protein mma_0458 [Janthinobacte... 179 1e-43 ref|YP_001007588.1| hypothetical protein YE3422A [Yersinia enter... 179 2e-43 ref|YP_001750002.1| hypothetical protein PputW619_3143 [Pseudomo... 177 4e-43 ref|YP_004237135.1| hypothetical protein Acav_4689 [Acidovorax a... 177 6e-43 ref|YP_004299377.1| hypothetical protein YE105_C3180 [Yersinia e... 176 9e-43 >ref|YP_003775722.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63814.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 144 Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 143/144 (99%), Positives = 144/144 (100%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL Sbjct: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 Query: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS Sbjct: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 Query: 121 AVATVCFMMAGFVSVYLLRHVAGV 144 AVATVCFMMAGFVSVYLLRHVAG+ Sbjct: 121 AVATVCFMMAGFVSVYLLRHVAGL 144 >ref|YP_551620.1| hypothetical protein Bpro_4846 [Polaromonas sp. JS666] gb|ABE46722.1| protein of unknown function DUF395, YeeE/YedE [Polaromonas sp. JS666] Length = 144 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 93/141 (65%), Positives = 111/141 (78%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 M +DW AFTP +AL GG LIGLAAA+ L NGRVAG+SG+LGGLL+P GD WRA F+ Sbjct: 1 MSIDWNAFTPWSALLGGMLIGLAAAMFALLNGRVAGISGVLGGLLKPARGDVGWRAAFIA 60 Query: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 GL+ APL+ + LP + IDAG G +V AGLLVG+GTRYG+GCTSGHGVCGLSRFSLRS Sbjct: 61 GLVGAPLVYAAFSVLPAVQIDAGYGALVAAGLLVGIGTRYGSGCTSGHGVCGLSRFSLRS 120 Query: 121 AVATVCFMMAGFVSVYLLRHV 141 AT FM AGFV+V++LRH+ Sbjct: 121 LAATATFMGAGFVTVFVLRHL 141 >gb|ADP97543.1| protein of unknown function, YeeE/YedE [Marinobacter adhaerens HP15] Length = 145 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 90/144 (62%), Positives = 113/144 (78%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 +++ W+ FTP +ALAGG L+G+AAA +L NGR+AG+SGILGGLL P GD AWR FL Sbjct: 2 IEIAWSNFTPWSALAGGILVGIAAASFLLLNGRIAGISGILGGLLSPAKGDIAWRVAFLA 61 Query: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 GL+ AP + L LPPI I+AG +++AGLLVG+GTRYG+GCTSGHGVCGLSR SLRS Sbjct: 62 GLIGAPAVWVLATELPPIEIEAGYPALIVAGLLVGIGTRYGSGCTSGHGVCGLSRLSLRS 121 Query: 121 AVATVCFMMAGFVSVYLLRHVAGV 144 AT+ FM AGFV+VY++RH+ GV Sbjct: 122 LAATMSFMAAGFVTVYVIRHLMGV 145 >emb|CBY25857.1| putative transmembrane protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 143 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 87/141 (61%), Positives = 112/141 (79%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 M +DW FTP +AL GG L+G+A IL+L NGR+AG+SGILGGLL P+AGD WR F+L Sbjct: 1 MTIDWANFTPYSALTGGVLLGIAVIILLLCNGRIAGISGILGGLLPPKAGDTFWRVTFIL 60 Query: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 GL+AAP++ L +LP I IDA L +++AGLLVG+GTRYGAGCTSGHGVCGL+RFS RS Sbjct: 61 GLIAAPVIYSLFTALPVIQIDASLPALIVAGLLVGIGTRYGAGCTSGHGVCGLARFSPRS 120 Query: 121 AVATVCFMMAGFVSVYLLRHV 141 +AT+ FM+ GF +V+L+ H+ Sbjct: 121 LLATLSFMLTGFATVWLVHHL 141 >ref|ZP_08273905.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32620.1| putative transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 143 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 90/141 (63%), Positives = 115/141 (81%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 M +DW FTP T+LAGG LIG+AAA+L+ NGR+AG+SGILGGLL+P GD WRA+F+L Sbjct: 1 MTIDWMHFTPWTSLAGGVLIGIAAAMLLFFNGRIAGISGILGGLLRPVRGDIGWRAVFVL 60 Query: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 GL+AAPL+ RL A LP + ++AG +++AGLLVG+GTRYG+GCTSGHGVCGL+R S RS Sbjct: 61 GLVAAPLVWRLFAPLPAVQVEAGNVTLIVAGLLVGVGTRYGSGCTSGHGVCGLARLSPRS 120 Query: 121 AVATVCFMMAGFVSVYLLRHV 141 VAT FM+AGF V+++RHV Sbjct: 121 MVATAAFMLAGFACVFIVRHV 141 >ref|YP_001352148.1| hypothetical protein mma_0458 [Janthinobacterium sp. Marseille] gb|ABR90586.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 143 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 94/141 (66%), Positives = 111/141 (78%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 M +DW FTP ALAGG LIGLAAA+ IL NG++AG+SGILGGLL+P GD WR FLL Sbjct: 1 MTIDWMHFTPWHALAGGLLIGLAAALFILFNGKIAGISGILGGLLRPVKGDLLWRVAFLL 60 Query: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 GL+AAPL+ L LP IDA +V+AGLLVGLGTRYGAGCTSGHGVCGLSR SLRS Sbjct: 61 GLIAAPLVFALFQPLPDATIDASNVTLVVAGLLVGLGTRYGAGCTSGHGVCGLSRLSLRS 120 Query: 121 AVATVCFMMAGFVSVYLLRHV 141 VAT+ FM +GF++VY++RH+ Sbjct: 121 LVATLAFMASGFLTVYIVRHL 141 >ref|YP_001007588.1| hypothetical protein YE3422A [Yersinia enterocolitica subsp. enterocolitica 8081] emb|CAL13446.1| probable membrane protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 143 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 87/141 (61%), Positives = 113/141 (80%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 M +DW FTP +ALAGGAL+G+A IL L NGR+AG+SGILGGLL P+AG+ +WR F+L Sbjct: 1 MTIDWANFTPFSALAGGALLGIAVTILWLCNGRIAGISGILGGLLPPKAGNISWRVAFVL 60 Query: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 GL+ AP++ + LP I IDA L +++AGLLVG+GTRYGAGCTSGHGVCGL+RFS RS Sbjct: 61 GLIMAPIIYSIFTDLPVIQIDADLPVLIVAGLLVGIGTRYGAGCTSGHGVCGLARFSPRS 120 Query: 121 AVATVCFMMAGFVSVYLLRHV 141 +AT+ FM+ GF +V+L+RH+ Sbjct: 121 LLATLSFMLTGFATVWLVRHL 141 >ref|YP_001750002.1| hypothetical protein PputW619_3143 [Pseudomonas putida W619] gb|ACA73633.1| protein of unknown function DUF395 YeeE/YedE [Pseudomonas putida W619] Length = 144 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 95/145 (65%), Positives = 112/145 (77%), Gaps = 4/145 (2%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAW--RAMF 58 M +DW FTP TAL GGALIGLAA++ ILANGR+AG+SG+L GLLQ G W +A+F Sbjct: 1 MSIDWINFTPWTALGGGALIGLAASLFILANGRIAGISGLLAGLLQ--WGSEGWGEKALF 58 Query: 59 LLGLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSL 118 LLGLL APL+ L A LP I ID +V+AGLLVGLGTRYG+GCTSGHGVCG+SR S Sbjct: 59 LLGLLVAPLVWGLFAVLPEIEIDTSWPALVIAGLLVGLGTRYGSGCTSGHGVCGVSRLSS 118 Query: 119 RSAVATVCFMMAGFVSVYLLRHVAG 143 RS VATVCFM +GF +VY++RHV G Sbjct: 119 RSLVATVCFMASGFATVYVIRHVLG 143 >ref|YP_004237135.1| hypothetical protein Acav_4689 [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX48568.1| protein of unknown function DUF395 YeeE/YedE [Acidovorax avenae subsp. avenae ATCC 19860] Length = 147 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 93/138 (67%), Positives = 111/138 (80%) Query: 3 VDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLLGL 62 +DW++FTP TALAGGALIGLAA L+L +GR+AG+SG+LGGLL+P GD AWRA F+ GL Sbjct: 4 IDWSSFTPGTALAGGALIGLAAGALMLVSGRIAGISGVLGGLLRPARGDMAWRAAFVAGL 63 Query: 63 LAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRSAV 122 +A+P L L A LP IDAG G +V+AGLLVGLGTRYGAGCTSGHGVCG+SR S RS Sbjct: 64 VASPWLHALFAPLPEPRIDAGTGTLVVAGLLVGLGTRYGAGCTSGHGVCGISRLSGRSLA 123 Query: 123 ATVCFMMAGFVSVYLLRH 140 AT+ FM AG +VY+LRH Sbjct: 124 ATLVFMAAGMATVYVLRH 141 >ref|YP_004299377.1| hypothetical protein YE105_C3180 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gb|ADZ43674.1| hypothetical protein YE105_C3180 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 143 Score = 176 bits (446), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 85/141 (60%), Positives = 111/141 (78%) Query: 1 MQVDWTAFTPVTALAGGALIGLAAAILILANGRVAGVSGILGGLLQPRAGDRAWRAMFLL 60 M +DW FTP +AL GG L+G+A IL L NG +AG+SGILGGLL P+AGD +WR F+L Sbjct: 1 MTIDWANFTPFSALTGGVLLGIAVTILWLCNGHIAGISGILGGLLPPKAGDTSWRVTFIL 60 Query: 61 GLLAAPLLMRLGASLPPIHIDAGLGQIVLAGLLVGLGTRYGAGCTSGHGVCGLSRFSLRS 120 GL+AAP++ L +LP I I+A L +++AGLLVG+GTRYGAGCTSGHGVCGL+RFS RS Sbjct: 61 GLIAAPVIYSLFTALPVIQINASLPVLIVAGLLVGIGTRYGAGCTSGHGVCGLARFSPRS 120 Query: 121 AVATVCFMMAGFVSVYLLRHV 141 +AT+ FM+ GF +V+L+ H+ Sbjct: 121 LLATLSFMLTGFATVWLVHHL 141