BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0329.p (688 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775709.1| PAS/PAC sensor hybrid histidine kinase respo... 1385 0.0 ref|YP_001773138.1| PAS/PAC sensor hybrid histidine kinase [Meth... 919 0.0 ref|YP_001992607.1| PAS/PAC sensor hybrid histidine kinase [Rhod... 900 0.0 ref|YP_001757081.1| PAS/PAC sensor hybrid histidine kinase [Meth... 898 0.0 ref|NP_948555.1| sensor histidine kinase [Rhodopseudomonas palus... 896 0.0 ref|YP_004108543.1| PAS/PAC sensor hybrid histidine kinase [Rhod... 891 0.0 ref|YP_570214.1| ATPase-like ATP-binding protein [Rhodopseudomon... 886 0.0 gb|EGH14154.1| PAS/PAC sensor hybrid histidine kinase [Pseudomon... 784 0.0 ref|YP_348541.1| PAS/PAC sensor hybrid histidine kinase [Pseudom... 768 0.0 ref|YP_004474253.1| PAS/PAC sensor hybrid histidine kinase [Pseu... 747 0.0 >ref|YP_003775709.1| PAS/PAC sensor hybrid histidine kinase response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63801.1| PAS/PAC sensor hybrid histidine kinase response regulator protein [Herbaspirillum seropedicae SmR1] Length = 688 Score = 1385 bits (3584), Expect = 0.0, Method: Compositional matrix adjust. Identities = 686/688 (99%), Positives = 687/688 (99%) Query: 1 LEFQPATQSPPLLSSAYRHALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGI 60 +EFQPATQSPPLLSSAYRHALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGI Sbjct: 1 MEFQPATQSPPLLSSAYRHALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGI 60 Query: 61 EGIVGKRLREVEPDNAQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQ 120 EGIVGKRLREVEPDNAQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQ Sbjct: 61 EGIVGKRLREVEPDNAQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQ 120 Query: 121 VSVLFRDVTARRRTEAALRENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIP 180 VSVLFRDVTARRRTEAALRENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIP Sbjct: 121 VSVLFRDVTARRRTEAALRENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIP 180 Query: 181 AERGLDGIKLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGR 240 AERGLDGIKLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGR Sbjct: 181 AERGLDGIKLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGR 240 Query: 241 VEMTPDGIPSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEA 300 VEMTPDGIPSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEA Sbjct: 241 VEMTPDGIPSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEA 300 Query: 301 LRQAQKMEAVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKR 360 LRQAQKMEAVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKR Sbjct: 301 LRQAQKMEAVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKR 360 Query: 361 AAALTQRLLAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDI 420 AAALTQRLLAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDI Sbjct: 361 AAALTQRLLAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDI 420 Query: 421 GQMENALLNLCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGM 480 GQMENALLNLCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGM Sbjct: 421 GQMENALLNLCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGM 480 Query: 481 SPEVVARAFDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHV 540 SPEVVARAFDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHV Sbjct: 481 SPEVVARAFDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHV 540 Query: 541 GEGGVDDLALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDGPSALR 600 GEGGVDDLALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGY VLEAEDGPSALR Sbjct: 541 GEGGVDDLALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYSVLEAEDGPSALR 600 Query: 601 VVEACQEIDLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGM 660 VVEACQEIDLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGM Sbjct: 601 VVEACQEIDLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGM 660 Query: 661 QVLTKPFAADVLARRVKELVGEDDPGGH 688 QVLTKPFAADVLARRVKELVGEDDPGGH Sbjct: 661 QVLTKPFAADVLARRVKELVGEDDPGGH 688 >ref|YP_001773138.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium sp. 4-46] gb|ACA20704.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium sp. 4-46] Length = 830 Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/671 (69%), Positives = 538/671 (80%), Gaps = 9/671 (1%) Query: 17 YRHALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGIEGIVGKRLREVEPDNA 76 YR AL +AIDDGFCIIEF DGPHGPLSDYVH+EAN+GY RHTGI +VGK LR++ PD A Sbjct: 158 YR-ALFQAIDDGFCIIEFRDGPHGPLSDYVHVEANAGYARHTGITDVVGKTLRDIAPDEA 216 Query: 77 QVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVSVLFRDVTARRRTEA 136 + WL IYG+VL TG+ VRFE+ F AA RHIEVSA+RV P RQVSVLFRDVTAR+R E Sbjct: 217 EGWLAIYGRVLRTGEPVRFERRFVAADRHIEVSASRVEPASRRQVSVLFRDVTARKRVED 276 Query: 137 ALR-------ENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIPAERGLDGIK 189 ALR EN+ RVQLAL AGAIIGTW WDLPSDRFSVD+GFA AFG+ G +G++ Sbjct: 277 ALRASEALARENIARVQLALAAGAIIGTWFWDLPSDRFSVDEGFARAFGLDPALGREGLR 336 Query: 190 LDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGRVEMTPDGIP 249 L +++ +VHPDDR L+ IREA+ARGGA+AHQYRTRR DG Y WLEANGRVE+ PDG P Sbjct: 337 LAQVVETVHPDDRPGLAEAIREAIARGGAHAHQYRTRRADGTYSWLEANGRVELGPDGTP 396 Query: 250 SKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEALRQAQKMEA 309 FPGVLID+EGRRAVEAERDR A LR+LNETLEQRV ERTA L+ AEEALRQ+QKMEA Sbjct: 397 LSFPGVLIDVEGRRAVEAERDRVTAMLRSLNETLEQRVAERTAELMRAEEALRQSQKMEA 456 Query: 310 VGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKRAAALTQRLL 369 VGQLTGGLAHDFNN+LAG+ GSL+LM+ RL QGR+GD+ER++ AQ A KRAAALT RLL Sbjct: 457 VGQLTGGLAHDFNNMLAGVVGSLDLMQTRLLQGRVGDLERYIGAAQGAAKRAAALTHRLL 516 Query: 370 AFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDIGQMENALLN 429 AFSRRQTLDPKP D+NR+V GM EL+ R+VGPA++V+ + A GLW T VD GQ+ENALLN Sbjct: 517 AFSRRQTLDPKPTDVNRLVEGMVELVRRTVGPAVSVDVVGAAGLWPTLVDPGQLENALLN 576 Query: 430 LCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGMSPEVVARAF 489 LCINARDAMP GGR+ +ETANRWLD A +R + PGQYVSL VSD G GM+PEV ARAF Sbjct: 577 LCINARDAMPEGGRIVVETANRWLDHRAARERDMEPGQYVSLCVSDNGTGMTPEVAARAF 636 Query: 490 DPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHVGEGGVDDLA 549 DPFFTTKPTG+GTGLGLSMVYGFA QS G VRI SELGQG VC+YLPRH+GE + Sbjct: 637 DPFFTTKPTGEGTGLGLSMVYGFAKQSDGQVRIDSELGQGTTVCLYLPRHLGEAEAPE-R 695 Query: 550 LPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDGPSALRVVEACQEID 609 +P+ + A +T+LVVDDEP VRM+ EVL DLGY +EA DG S LR++ + ID Sbjct: 696 VPDLTEAARAKSGETVLVVDDEPSVRMLVTEVLEDLGYAAIEAADGASGLRLLRSSARID 755 Query: 610 LLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGMQVLTKPFAA 669 L++TDVGLP GMNGRQ+A+A R RPDL VLFVTGYAENA LNHGHL GM VLTKPFA Sbjct: 756 LVVTDVGLPGGMNGRQMAEAARVTRPDLKVLFVTGYAENAALNHGHLAPGMAVLTKPFAL 815 Query: 670 DVLARRVKELV 680 D LA R++ ++ Sbjct: 816 DALAIRIRTMI 826 >ref|YP_001992607.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris TIE-1] gb|ACF02132.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris TIE-1] Length = 686 Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/687 (64%), Positives = 533/687 (77%), Gaps = 8/687 (1%) Query: 3 FQPATQSPPLLSSAYRHALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGIEG 62 QP + S A AL EAIDDGFCIIEF DGPHGPLSDY HIEAN+GY + TGI Sbjct: 1 MQPPSSPAVSQSEARYRALFEAIDDGFCIIEFFDGPHGPLSDYRHIEANAGYEKQTGIPN 60 Query: 63 IVGKRLREVEPDNAQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVS 122 I+G+ LR++ PD A W ++Y VLLTG+ + FE+EF A R IEVSATR+ P E+RQVS Sbjct: 61 IIGRTLRDLVPDEADGWAELYRSVLLTGRPLHFEREFLAVNRIIEVSATRIEPPELRQVS 120 Query: 123 VLFRDVTARRRTEAALR-------ENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAA 175 VLFRD+TAR+R EAALR ENV+RVQLAL AGAIIGTW+WDLPSDRF+VD+ FA Sbjct: 121 VLFRDITARKRAEAALRDSEQLARENVQRVQLALAAGAIIGTWLWDLPSDRFTVDEAFAR 180 Query: 176 AFGIPAERGLDGIKLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWL 235 AFG+ G DG+ L +++ +VHPDDR L+ I EA+ RGG YAHQYR RR DG+YYWL Sbjct: 181 AFGLDPALGRDGLSLAQIVATVHPDDRAGLATAIEEAIKRGGPYAHQYRVRRADGKYYWL 240 Query: 236 EANGRVEMTPDGIPSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALL 295 EANGRVE PDG P FPGVLID++ RRA+ AERDRA+A LR LNETLEQRV E A LL Sbjct: 241 EANGRVEHGPDGTPLSFPGVLIDVDDRRALVAERDRAIAELRALNETLEQRVAEARAELL 300 Query: 296 NAEEALRQAQKMEAVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQ 355 + E LRQ+QKMEAVGQLTGGLAHDFNN+LAGISGSLELM R+ QGR+G+IE+++ AQ Sbjct: 301 RSAEQLRQSQKMEAVGQLTGGLAHDFNNLLAGISGSLELMSSRIRQGRVGEIEKYVVAAQ 360 Query: 356 SAVKRAAALTQRLLAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWH 415 AVKRAA+LT RLLAF+RRQTL P A++NR+V+GM +LI RSVGP I V+ + A GLW Sbjct: 361 GAVKRAASLTHRLLAFARRQTLTPTAANVNRLVSGMIDLIQRSVGPGIDVQHVGAAGLWS 420 Query: 416 TFVDIGQMENALLNLCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSD 475 VD+ Q+E+ALLNLCINARDAMP+GG++TIET NRW+D + +P GQYVSL VSD Sbjct: 421 VLVDVPQLESALLNLCINARDAMPNGGKITIETGNRWIDRSQSRLYDIPTGQYVSLCVSD 480 Query: 476 TGAGMSPEVVARAFDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIY 535 TG GM+P+V+A+AFDPFFTTKP GQGTGLGLSM+YGFA QSGG VRIYSE+GQG MVCIY Sbjct: 481 TGTGMTPDVIAKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGQVRIYSEVGQGTMVCIY 540 Query: 536 LPRHVGEGGVDDLALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDG 595 LPRH GE D+ P+ + +P A +T++VVDDEP VRM+ +VL DLGY LEA D Sbjct: 541 LPRHRGEAAEDE-RFPDSTEIPFAHTGETVMVVDDEPTVRMLVADVLEDLGYTALEASDS 599 Query: 596 PSALRVVEACQEIDLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGH 655 L+++++ IDLL+TDVGLP GMNGRQLADA R RP L VLF+TG+AENA+LN+G Sbjct: 600 VGGLKLLQSDARIDLLVTDVGLPGGMNGRQLADAARQIRPGLNVLFITGFAENALLNNGQ 659 Query: 656 LERGMQVLTKPFAADVLARRVKELVGE 682 LE GM VLTKPFA D LA R++EL+G+ Sbjct: 660 LEPGMAVLTKPFAVDTLAARIRELIGK 686 >ref|YP_001757081.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium radiotolerans JCM 2831] gb|ACB26398.1| PAS/PAC sensor hybrid histidine kinase [Methylobacterium radiotolerans JCM 2831] Length = 858 Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/673 (67%), Positives = 539/673 (80%), Gaps = 10/673 (1%) Query: 17 YRHALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGIEGIVGKRLRE-VEPDN 75 YR L EAIDDGFCIIEF DGPHGPLSDYVH+EAN GY RHTGI GIVG+ LR+ V + Sbjct: 185 YR-TLFEAIDDGFCIIEFFDGPHGPLSDYVHVEANPGYERHTGIAGIVGRTLRDLVSAAD 243 Query: 76 AQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVSVLFRDVTARRRTE 135 A+ WL++YG VL +G +RFE+ F A R I+VSA R+GP RQVSVLFRD+TARR+ E Sbjct: 244 AEAWLELYGGVLRSGLPIRFERFFAQADRFIDVSAARIGPASRRQVSVLFRDITARRQAE 303 Query: 136 AALR-------ENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIPAERGLDGI 188 ALR N+ERVQLAL AGAIIGTW WDLPSDRF+VD+GFA +FG+ G DGI Sbjct: 304 DALRASEALARTNIERVQLALAAGAIIGTWHWDLPSDRFTVDEGFARSFGLDPALGRDGI 363 Query: 189 KLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGRVEMTPDGI 248 L ++ +VHPDD+ L+A I A+ARGGAYAHQYR RR DG YYWLEANGRV+ PDG Sbjct: 364 PLARIVATVHPDDQAGLAAAINAAVARGGAYAHQYRVRRADGHYYWLEANGRVDHAPDGT 423 Query: 249 PSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEALRQAQKME 308 P FPGVLID++ RRAVEAERDR AALR+LNETLEQRV ERTA L+ AEEALRQ+QKME Sbjct: 424 PLSFPGVLIDVDERRAVEAERDRVAAALRSLNETLEQRVAERTAELMRAEEALRQSQKME 483 Query: 309 AVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKRAAALTQRL 368 AVGQLTGGLAHDFNN+LAGI GSLELM+ R+ QGR+GD++R++ AQ A KRAAALT RL Sbjct: 484 AVGQLTGGLAHDFNNMLAGIVGSLELMQTRMLQGRVGDLDRYIGAAQGAAKRAAALTHRL 543 Query: 369 LAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDIGQMENALL 428 LAFSRRQTLDPKP D NR+V GM EL+ R+VGP++A+E++ AGGLW T VD Q+ENALL Sbjct: 544 LAFSRRQTLDPKPTDANRLVEGMMELVRRTVGPSVAIESVGAGGLWPTLVDPSQLENALL 603 Query: 429 NLCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGMSPEVVARA 488 NLCINARDAMP GGR+ IETANRWLD A +R + PGQYV+L VSD G GM+P+VVA+A Sbjct: 604 NLCINARDAMPAGGRIVIETANRWLDHRAAQERELEPGQYVTLCVSDNGTGMTPDVVAKA 663 Query: 489 FDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHVGEGGVDDL 548 FDPFFTTKP G+GTGLGLSM+YGFA QSGG VRIYSE+GQG MVC+YLPRH+GE ++ Sbjct: 664 FDPFFTTKPIGEGTGLGLSMIYGFAKQSGGQVRIYSEVGQGTMVCLYLPRHLGEAEA-EV 722 Query: 549 ALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDGPSALRVVEACQEI 608 +LP+ +H P A +T+LVVDDEP VRM+ EVL DLGY +EA DG S L+V+++ I Sbjct: 723 SLPDLAHAPRAEQGETVLVVDDEPTVRMLVTEVLEDLGYAAIEAADGASGLKVLQSDVRI 782 Query: 609 DLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGMQVLTKPFA 668 D+L+TDVGLP GMNGRQ+ADA R RPDL VLF+TGYAENA LNHGHL GMQV+TKPFA Sbjct: 783 DMLITDVGLPGGMNGRQMADAGRQHRPDLKVLFITGYAENAALNHGHLGPGMQVMTKPFA 842 Query: 669 ADVLARRVKELVG 681 + LA R++ ++G Sbjct: 843 LEALATRIRGIIG 855 >ref|NP_948555.1| sensor histidine kinase [Rhodopseudomonas palustris CGA009] emb|CAE28657.1| sensor histidine kinase with multiple PAS and a response regulator receiver domain [Rhodopseudomonas palustris CGA009] Length = 686 Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/687 (64%), Positives = 532/687 (77%), Gaps = 8/687 (1%) Query: 3 FQPATQSPPLLSSAYRHALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGIEG 62 QP + S A AL EAIDDGFCIIEF DGPHGPLSDY HIEAN+GY + TGI Sbjct: 1 MQPPSSPAVSQSEARYRALFEAIDDGFCIIEFFDGPHGPLSDYRHIEANAGYEKQTGIPN 60 Query: 63 IVGKRLREVEPDNAQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVS 122 I+G+ LR++ PD A W ++Y VL+TG+ + FE+EF A R IEVSATR+ P E+RQVS Sbjct: 61 IIGRTLRDLVPDEADGWAELYRSVLVTGRPIHFEREFLAVNRIIEVSATRIEPPELRQVS 120 Query: 123 VLFRDVTARRRTEAALR-------ENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAA 175 VLFRD+TAR+R EAALR ENV+RVQLAL AGAIIGTW+WDLPSDRF+VD+ FA Sbjct: 121 VLFRDITARKRAEAALRDSEQLARENVQRVQLALAAGAIIGTWLWDLPSDRFTVDEAFAR 180 Query: 176 AFGIPAERGLDGIKLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWL 235 AFG+ G DG+ L +++ +VHPDDR L+ I EA+ RGG YAHQYR RR DG+YYWL Sbjct: 181 AFGLDPALGRDGLSLAQIVATVHPDDRAGLATAIEEAIKRGGPYAHQYRVRRTDGKYYWL 240 Query: 236 EANGRVEMTPDGIPSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALL 295 EANGRVE PDG P FPGVLID++ RRA+ AERDRA+A LR LNETLEQRV E A LL Sbjct: 241 EANGRVEHGPDGTPLSFPGVLIDVDDRRALVAERDRAIAELRALNETLEQRVAEARAELL 300 Query: 296 NAEEALRQAQKMEAVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQ 355 + E LRQ+QKMEAVGQLTGGLAHDFNN+LAGISGSLELM R+ QGR+G+IE+++ AQ Sbjct: 301 RSAEQLRQSQKMEAVGQLTGGLAHDFNNLLAGISGSLELMSSRIRQGRVGEIEKYVVAAQ 360 Query: 356 SAVKRAAALTQRLLAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWH 415 AVKRAA+LT RLLAF+RRQTL P A++NR+V+GM +LI RSVGP I V+ + A GLW Sbjct: 361 GAVKRAASLTHRLLAFARRQTLTPTAANVNRLVSGMIDLIQRSVGPGIDVQHVGAAGLWS 420 Query: 416 TFVDIGQMENALLNLCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSD 475 VD+ Q+E+ALLNL INARDAMP+GG++TIET NRW+D + +P GQYVSL VSD Sbjct: 421 VLVDVPQLESALLNLSINARDAMPNGGKITIETGNRWIDRSQSRLYDIPTGQYVSLCVSD 480 Query: 476 TGAGMSPEVVARAFDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIY 535 TG GM+P+V+A+AFDPFFTTKP GQGTGLGLSM+YGFA QSGG VRIYSE+GQG MVCIY Sbjct: 481 TGTGMTPDVIAKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGQVRIYSEVGQGTMVCIY 540 Query: 536 LPRHVGEGGVDDLALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDG 595 LPRH GE D+ P+ + +P A +T++VVDDEP VRM+ +VL DLGY LEA D Sbjct: 541 LPRHRGEAAEDE-RFPDSTEIPFAHTGETVMVVDDEPTVRMLVADVLEDLGYTALEASDS 599 Query: 596 PSALRVVEACQEIDLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGH 655 L+++++ IDLL+TDVGLP GMNGRQLADA R RP L VLF+TG+AENA+LN+G Sbjct: 600 VGGLKLLQSDARIDLLVTDVGLPGGMNGRQLADAARQIRPGLNVLFITGFAENALLNNGQ 659 Query: 656 LERGMQVLTKPFAADVLARRVKELVGE 682 LE GM VLTKPFA D LA R++EL+G+ Sbjct: 660 LEPGMAVLTKPFAVDTLAARIRELIGK 686 >ref|YP_004108543.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris DX-1] gb|ADU43810.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris DX-1] Length = 686 Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/682 (64%), Positives = 532/682 (78%), Gaps = 9/682 (1%) Query: 9 SPPLLSSAYRH-ALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGIEGIVGKR 67 SP + S R+ AL EAIDDGFCIIEF DGPHGPLSDY HIEAN+GY + TGI I+G+ Sbjct: 6 SPAVSQSEARYRALFEAIDDGFCIIEFFDGPHGPLSDYRHIEANAGYEKQTGIPDIIGRT 65 Query: 68 LREVEPDNAQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVSVLFRD 127 LR++ PD A W ++Y VLLTG+ + FE+EF A R IEVSATR+ P E+ QV+VLFRD Sbjct: 66 LRDLVPDEADGWAELYRSVLLTGRPIHFEREFIAVNRIIEVSATRIEPPELHQVAVLFRD 125 Query: 128 VTARRRTEAALRE-------NVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIP 180 +TAR+R EAALR+ NV+RVQLAL AGAIIGTW+WDLP+DRF+VD+ FA AFG+ Sbjct: 126 ITARKRAEAALRDSEQLARDNVQRVQLALAAGAIIGTWLWDLPTDRFTVDEAFARAFGLD 185 Query: 181 AERGLDGIKLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGR 240 G DG+ L +++ +VHPDD+ L+A I EA+ RGG YAHQYR RR DG+YYWLEANGR Sbjct: 186 PALGRDGLSLAQVVATVHPDDQAGLAAAIEEAVKRGGPYAHQYRVRRADGKYYWLEANGR 245 Query: 241 VEMTPDGIPSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEA 300 VE PDG P FPGVLIDI+ RRA+ AERDRA+A LR LNETLEQR+ E A LL + E Sbjct: 246 VEHGPDGTPLSFPGVLIDIDDRRALAAERDRAIAELRALNETLEQRIAEARAELLRSAEQ 305 Query: 301 LRQAQKMEAVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKR 360 LRQ+QKMEAVGQLTGGLAHDFNN+LAGISGSLELM R+ QGRIG+I++++ AQ AVKR Sbjct: 306 LRQSQKMEAVGQLTGGLAHDFNNLLAGISGSLELMSTRIRQGRIGEIDKYVVAAQGAVKR 365 Query: 361 AAALTQRLLAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDI 420 AA+LT RLLAF+RRQTL P A++NR+V GM +LI RSVGP I V+ + A GLW VD+ Sbjct: 366 AASLTHRLLAFARRQTLTPTAANVNRLVGGMLDLIQRSVGPGIDVQHVGAAGLWSVLVDV 425 Query: 421 GQMENALLNLCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGM 480 Q+E+ALLNLCINARDAMP GG++TIET NRW+D + +P GQYVSL VSDTG GM Sbjct: 426 PQLESALLNLCINARDAMPSGGKITIETGNRWIDRAQSRLYDIPTGQYVSLCVSDTGTGM 485 Query: 481 SPEVVARAFDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHV 540 +P+V+A+AFDPFFTTKP GQGTGLGLSM+YGFA QSGG VRIYSE+GQG MVCIYLPRH Sbjct: 486 TPDVIAKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGQVRIYSEVGQGTMVCIYLPRHR 545 Query: 541 GEGGVDDLALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDGPSALR 600 GE D+ P+ + +P A +T++VVDDEP VRM+ +VL DLGY LEA D L+ Sbjct: 546 GEAAEDE-RFPDSTAIPFAHTGETVMVVDDEPTVRMLVADVLEDLGYSALEASDSVGGLK 604 Query: 601 VVEACQEIDLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGM 660 ++++ IDLL+TDVGLP GMNGRQLADA R RP L VLF+TG+AENA+LN+G LE GM Sbjct: 605 LLQSDARIDLLVTDVGLPGGMNGRQLADAARQIRPGLNVLFITGFAENALLNNGQLEPGM 664 Query: 661 QVLTKPFAADVLARRVKELVGE 682 VLTKPFA D LA R++EL+G+ Sbjct: 665 AVLTKPFAVDTLAARIRELIGK 686 >ref|YP_570214.1| ATPase-like ATP-binding protein [Rhodopseudomonas palustris BisB5] gb|ABE40313.1| ATP-binding region, ATPase-like [Rhodopseudomonas palustris BisB5] Length = 847 Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/676 (63%), Positives = 535/676 (79%), Gaps = 8/676 (1%) Query: 14 SSAYRHALLEAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGIEGIVGKRLREVEP 73 S A AL EAIDDGFCIIEF DGPHGPLSDYVH+EAN+GY R TGI IVG+ +R++ P Sbjct: 173 SEARYRALFEAIDDGFCIIEFFDGPHGPLSDYVHVEANAGYERQTGIPDIVGRTVRDLVP 232 Query: 74 DNAQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVSVLFRDVTARRR 133 D A W+++Y VL TG+ + FE++F A R IEVSA+R+ P RQVSVLFRD+TAR++ Sbjct: 233 DEADGWVELYRDVLFTGRAIHFERDFVAVNRIIEVSASRIEPESRRQVSVLFRDITARKQ 292 Query: 134 TEAALR-------ENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIPAERGLD 186 +EAALR ENV+RV+LAL AGAIIGTW+WDLP+DRF+VD+ FA AFG+ +G + Sbjct: 293 SEAALRASETLARENVQRVKLALAAGAIIGTWLWDLPNDRFTVDEAFARAFGLDPAKGRE 352 Query: 187 GIKLDELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGRVEMTPD 246 G+ L +++ +VHPDD+ L+A I EA+ RGG+YAHQYR RR DG+YYWLEANGRV+ PD Sbjct: 353 GLSLAQIVETVHPDDQAGLAAAINEAVKRGGSYAHQYRVRRADGKYYWLEANGRVDHGPD 412 Query: 247 GIPSKFPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEALRQAQK 306 G P FPGVLID+E RRA+ ERDRA++ALR+LNETLEQR+ E A LL +EE LRQ+QK Sbjct: 413 GKPLSFPGVLIDVEDRRALVDERDRAISALRSLNETLEQRIAESRAELLRSEEQLRQSQK 472 Query: 307 MEAVGQLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKRAAALTQ 366 MEAVGQLTGGLAHDFNN+LAGISGSLELM R++QGR+ D++++L AQ AVKRAA+LT Sbjct: 473 MEAVGQLTGGLAHDFNNLLAGISGSLELMTTRISQGRLKDVDKYLVAAQGAVKRAASLTH 532 Query: 367 RLLAFSRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDIGQMENA 426 RLLAF+RRQTL P A++N++V+GM +LI R+VGP I V+ + A GLW VD+ Q+E+A Sbjct: 533 RLLAFARRQTLTPTAANVNKLVSGMLDLIQRTVGPGIEVQHVGATGLWAVLVDVPQLESA 592 Query: 427 LLNLCINARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGMSPEVVA 486 LLNLCINARDAMP GG++TIET NRW+D + + +P GQYVSL VSDTG GM+ +V+A Sbjct: 593 LLNLCINARDAMPSGGKITIETGNRWIDRVQSRIYDIPTGQYVSLCVSDTGTGMTRDVIA 652 Query: 487 RAFDPFFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHVGEGGVD 546 +AFDPFFTTKP GQGTGLGLSM+YGFA QSGG VRIYSE+G+GAMVCIYLPRH G D Sbjct: 653 KAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGQVRIYSEVGEGAMVCIYLPRHRGNAAED 712 Query: 547 DLALPEESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDGPSALRVVEACQ 606 + + P+ + +P A +T+LVVDDEP VRM+ +VL DLGY LEA D LR++++ Sbjct: 713 ERS-PDSTVIPFAEAGETVLVVDDEPTVRMLVADVLEDLGYTALEAADSVGGLRILQSEA 771 Query: 607 EIDLLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGMQVLTKP 666 IDLL+TDVGLP GMNGRQLADA R RP+L VLF+TG+AENA+LN+G LE GM VLTKP Sbjct: 772 RIDLLVTDVGLPGGMNGRQLADAARESRPNLNVLFITGFAENALLNNGQLEPGMAVLTKP 831 Query: 667 FAADVLARRVKELVGE 682 FA D LA R++EL+ + Sbjct: 832 FAVDTLAARIRELIAK 847 >gb|EGH14154.1| PAS/PAC sensor hybrid histidine kinase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 953 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/669 (60%), Positives = 498/669 (74%), Gaps = 2/669 (0%) Query: 13 LSSAYRHALL-EAIDDGFCIIEFIDGPHGPLSDYVHIEANSGYHRHTGIEGIVGKRLREV 71 ++S R++LL + IDDGFCIIEF+DGP+GPLSDY H+EAN GY R TGI GIVG+ +R + Sbjct: 284 IASDARYSLLFDNIDDGFCIIEFVDGPNGPLSDYNHVEANPGYERQTGIAGIVGQTIRGL 343 Query: 72 EPDNAQVWLDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVSVLFRDVTAR 131 P+ A W+++YG+VL TG RFE+ F AA R IEVSATRV V QVS+LFRD+TAR Sbjct: 344 APEEADGWVELYGEVLRTGNPKRFERYFAAADRVIEVSATRVESVAKPQVSLLFRDITAR 403 Query: 132 RRTEAALRENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIPAERGLDGIKLD 191 +R E EN+ERVQLALEAGAIIGTW WD+ + F VD+ F A G+ + + L Sbjct: 404 KRAETLAAENIERVQLALEAGAIIGTWFWDIRTGAFIVDESFTWAMGLNQTLAQERLTLA 463 Query: 192 ELMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGRVEMTPDGIPSK 251 ++ SVHPDD+ L A I A+ RGG Y HQYRTRR DGRYYW+EANGRV DG Sbjct: 464 QVTESVHPDDKPGLMAAIDAAIIRGGHYMHQYRTRRSDGRYYWVEANGRVSQAVDGTALT 523 Query: 252 FPGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEALRQAQKMEAVG 311 FPGVLID++ R +VEAERDRA+AALR+L + LEQR+EER+A L+ +EE LRQ+QKMEAVG Sbjct: 524 FPGVLIDVDARVSVEAERDRAIAALRSLTDNLEQRIEERSAELMRSEELLRQSQKMEAVG 583 Query: 312 QLTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKRAAALTQRLLAF 371 QLTGGLAHDFNN+LAGI GSLE+M VRL QGR+ DI+++++ A SA KRAAALT RLLAF Sbjct: 584 QLTGGLAHDFNNLLAGIIGSLEMMGVRLGQGRVKDIDKYMSAALSAAKRAAALTHRLLAF 643 Query: 372 SRRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDIGQMENALLNLC 431 SRRQTLDPK D+N +V GM EL+ R+VGP IAV+ + + L VD Q+ENALLNLC Sbjct: 644 SRRQTLDPKITDVNALVQGMVELVQRTVGPGIAVKVVGSDDLGLARVDPSQLENALLNLC 703 Query: 432 INARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGMSPEVVARAFDP 491 INARDAMP GG++ IETANRW+D ++ +P GQY+ LSVSDTG GMS +VV +AFDP Sbjct: 704 INARDAMPKGGKIVIETANRWIDKDAGSRQDIPEGQYLQLSVSDTGYGMSADVVRKAFDP 763 Query: 492 FFTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHVGEGGVDDLALP 551 FFTTKP GQGTGLGLSM+YGFA QS G VRI+S +G+G V IYLP H G + A Sbjct: 764 FFTTKPIGQGTGLGLSMIYGFAKQSNGQVRIHSVVGEGTTVSIYLPLHQGTVERAEAASS 823 Query: 552 EESHVPAAPGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDGPSALRVVEACQEIDLL 611 V A G +T+LVV+DEP VR++ +VL DLGY +EA D LRV+++ IDLL Sbjct: 824 PNLGVVAGAG-ETVLVVEDEPTVRLLVTDVLDDLGYIAVEAADSTGGLRVLQSNTRIDLL 882 Query: 612 LTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGMQVLTKPFAADV 671 ++DVGLP G+NGRQ+ADA R RPDL VLF+TGYAENA+L L+ GM V+TKPFA D Sbjct: 883 ISDVGLPGGLNGRQMADAARVIRPDLKVLFITGYAENALLEDNQLDPGMSVMTKPFAVDT 942 Query: 672 LARRVKELV 680 L R++EL+ Sbjct: 943 LVARIQELL 951 >ref|YP_348541.1| PAS/PAC sensor hybrid histidine kinase [Pseudomonas fluorescens Pf0-1] gb|ABA74551.1| PAS/PAC sensor hybrid histidine kinase [Pseudomonas fluorescens Pf0-1] Length = 998 Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/671 (58%), Positives = 487/671 (72%), Gaps = 17/671 (2%) Query: 21 LLEAIDDGFCIIEF-IDGPHGPLSDYVHIEANSGYHRHTGIEGIVGKRLREVEPDNAQVW 79 +LE I+ F I++ D P+ DY +EAN + R G+ + GK + E P+ + W Sbjct: 329 ILETIESAFAIVKVKFDANDEPV-DYYFVEANPAFERQCGV-NLRGKWVTEFAPNLERFW 386 Query: 80 LDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVSVLFRDVTARRR------ 133 + YG V TG+ FE R +V A RVG RQ+++LF DVT RR Sbjct: 387 FETYGHVAKTGEPANFENYANTFERWFDVRAVRVGDPADRQIAILFNDVTERRAAEDRLR 446 Query: 134 -TEAALRENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIPAERGLDGIKLDE 192 +EA RENVERVQLAL AGAIIGTW WDL +DRF++D+GFA F + G +G+ L++ Sbjct: 447 ASEAIARENVERVQLALAAGAIIGTWHWDLLTDRFAIDEGFAQVFNLDPALGREGLSLEQ 506 Query: 193 LMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGRVEMTPDGIPSKF 252 ++ SVHPDDR+ L+ I EA++RGGAY+HQYR RR DGRY W+EANGRVE D P +F Sbjct: 507 VITSVHPDDRDSLTTAIDEAISRGGAYSHQYRVRREDGRYQWIEANGRVECAEDATPLRF 566 Query: 253 PGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEALRQAQKMEAVGQ 312 PGVLID+E RR VEAERDRA+AALR+LN+TLEQRV RTA L+ AEE LRQ+QKMEAVGQ Sbjct: 567 PGVLIDVEERRTVEAERDRAIAALRSLNDTLEQRVSSRTAELMQAEEKLRQSQKMEAVGQ 626 Query: 313 LTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKRAAALTQRLLAFS 372 LTGGLAHDFNN+LAGISG+LELM R+ QGR+ ++++++ AQ AVKRAAALT RLLAFS Sbjct: 627 LTGGLAHDFNNLLAGISGALELMGARINQGRLNEVDKYMVTAQGAVKRAAALTHRLLAFS 686 Query: 373 RRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDIGQMENALLNLCI 432 RRQTLDP+P D+N ++ GM ELI R+VGP+I +ETI + LW T VD Q+ENALLNLCI Sbjct: 687 RRQTLDPRPTDVNTLMTGMTELIQRTVGPSILLETIGSSVLWPTLVDASQLENALLNLCI 746 Query: 433 NARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGMSPEVVARAFDPF 492 NARDAMP GGR+TIETANR +D A +P G+YV L V+DTG GMS +V+A+AFDPF Sbjct: 747 NARDAMPDGGRITIETANRIMDAETAGALDMPEGEYVCLCVTDTGTGMSADVIAKAFDPF 806 Query: 493 FTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHVGEGGVDDLALPE 552 FTTKP GQGTGLGLSM+YGFA QSGG VR++S++ +G +CIYLPRH G D + + Sbjct: 807 FTTKPLGQGTGLGLSMIYGFAKQSGGQVRVHSQVDRGTTMCIYLPRHRG----DPVQSHD 862 Query: 553 ESHVPAA---PGSKTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDGPSALRVVEACQEID 609 + H+ A S+TILVVDDEP VR + EVL DLGY +LEA D + L+V+++ ID Sbjct: 863 DKHIAPALVPKASETILVVDDEPTVRALLTEVLGDLGYNLLEAGDSVAGLKVLQSNVRID 922 Query: 610 LLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGMQVLTKPFAA 669 LL+TDVGLP GMNGRQLADA R RP+L LF+TGYAENAV+ G L GMQVLTKPFA Sbjct: 923 LLITDVGLPGGMNGRQLADAGREIRPNLTTLFITGYAENAVIGAGQLGPGMQVLTKPFAV 982 Query: 670 DVLARRVKELV 680 D L RV EL+ Sbjct: 983 DTLVARVSELM 993 >ref|YP_004474253.1| PAS/PAC sensor hybrid histidine kinase [Pseudomonas fulva 12-X] gb|AEF22159.1| PAS/PAC sensor hybrid histidine kinase [Pseudomonas fulva 12-X] Length = 976 Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/671 (56%), Positives = 479/671 (71%), Gaps = 17/671 (2%) Query: 21 LLEAIDDGFCIIEF-IDGPHGPLSDYVHIEANSGYHRHTGIEGIVGKRLREVEPDNAQVW 79 ++E I+ F I+E D P+ DY IE N + R +G+ ++GK + E P+ Q W Sbjct: 309 IMETIETAFAIVEVKFDAQDNPV-DYRFIEVNPAFERESGV-NLLGKWVTEYAPELEQFW 366 Query: 80 LDIYGKVLLTGQTVRFEQEFKAAARHIEVSATRVGPVEMRQVSVLFRDVTARRR------ 133 D YG V T + + FE R +V A VG RQ+ V F DVTARR Sbjct: 367 FDTYGHVAKTREPLTFESYANTFERWFDVKAVPVGDPSERQLGVFFNDVTARRNAQERLQ 426 Query: 134 -TEAALRENVERVQLALEAGAIIGTWIWDLPSDRFSVDDGFAAAFGIPAERGLDGIKLDE 192 +EA R+N+ERVQLAL AGAIIGTW W + +DRF+VD FA AFG+ G G+ L++ Sbjct: 427 ASEALARQNIERVQLALAAGAIIGTWHWHVLTDRFTVDKAFAEAFGLDPALGFKGLSLEQ 486 Query: 193 LMLSVHPDDRELLSARIREALARGGAYAHQYRTRRRDGRYYWLEANGRVEMTPDGIPSKF 252 ++ +VHPDDRE + A I + ARGGA++HQYR +R DG+YYW+EANGRVE+ DG F Sbjct: 487 IIATVHPDDREGVIAAIDDVFARGGAFSHQYRVKRTDGKYYWIEANGRVELADDGTALNF 546 Query: 253 PGVLIDIEGRRAVEAERDRALAALRTLNETLEQRVEERTAALLNAEEALRQAQKMEAVGQ 312 PGVLID+E RRA+ ERDRA AALR+LN+TLEQRV ERTA L+ AEE LRQ+QKMEAVGQ Sbjct: 547 PGVLIDVEERRALMDERDRATAALRSLNDTLEQRVAERTADLMKAEEKLRQSQKMEAVGQ 606 Query: 313 LTGGLAHDFNNILAGISGSLELMKVRLAQGRIGDIERHLNGAQSAVKRAAALTQRLLAFS 372 LTGGLAHDFNN+LAGISGSLE+M VR+AQGR+ ++E+++ AQ A +RAAALT RLLAFS Sbjct: 607 LTGGLAHDFNNLLAGISGSLEMMAVRIAQGRVAELEKYILTAQGASRRAAALTHRLLAFS 666 Query: 373 RRQTLDPKPADLNRIVAGMHELIGRSVGPAIAVETIAAGGLWHTFVDIGQMENALLNLCI 432 RRQTLDP+P D+N ++ GM ELI R+VGP+I +ET+ A +W VD Q+ENALLNLCI Sbjct: 667 RRQTLDPRPTDVNTLLEGMAELIQRTVGPSITLETVGATDIWPVKVDASQLENALLNLCI 726 Query: 433 NARDAMPHGGRLTIETANRWLDDIGALQRGVPPGQYVSLSVSDTGAGMSPEVVARAFDPF 492 NARDAMP GGR+ IETANRW+D A + GQY++LSV+DTG GM+PEV+A+AFDPF Sbjct: 727 NARDAMPSGGRIKIETANRWMDREVARTHDLTEGQYLALSVTDTGVGMTPEVIAKAFDPF 786 Query: 493 FTTKPTGQGTGLGLSMVYGFAGQSGGTVRIYSELGQGAMVCIYLPRHVGEGGVDDLALPE 552 FTTKP G GTGLGLSM+YGFA QSGG RI SE+G G + +YLPR+ G VD A E Sbjct: 787 FTTKPIGHGTGLGLSMIYGFAKQSGGQARIRSEVGVGTTLTLYLPRYF--GSVD--AARE 842 Query: 553 ESHVPAAPGS---KTILVVDDEPLVRMVTVEVLRDLGYCVLEAEDGPSALRVVEACQEID 609 E + A S +TILVVDDEP +R++ VE L + GY V+EA D + L+V+ + ID Sbjct: 843 ELYSSAVELSERGETILVVDDEPTIRILLVEALSERGYSVIEAADSVAGLKVLRSDVHID 902 Query: 610 LLLTDVGLPNGMNGRQLADAIRAPRPDLPVLFVTGYAENAVLNHGHLERGMQVLTKPFAA 669 LL++DVGLP GMNGRQ+ADA R RP L LF+TGYA NA + GHL+ GMQV+TKPF+ Sbjct: 903 LLISDVGLPGGMNGRQMADAGRELRPGLKTLFITGYAANAAIGDGHLQPGMQVITKPFSV 962 Query: 670 DVLARRVKELV 680 D L RV+EL+ Sbjct: 963 DSLITRVQELI 973