BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0314.p (145 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775697.1| universal stress protein [Herbaspirillum ser... 288 1e-76 ref|YP_001100591.1| universal stress family protein [Herminiimon... 129 1e-28 ref|YP_004751364.1| Universal stress protein [Collimonas fungivo... 122 2e-26 ref|YP_003775807.1| universal stress protein [Herbaspirillum ser... 117 8e-25 ref|YP_003777268.1| universal stress protein [Herbaspirillum ser... 116 9e-25 ref|YP_001100600.1| universal stress family protein [Herminiimon... 116 1e-24 ref|ZP_04577433.1| universal stress protein UspA [Oxalobacter fo... 114 4e-24 ref|YP_001099866.1| universal stress protein [Herminiimonas arse... 114 6e-24 ref|ZP_08276002.1| Universal stress protein [Oxalobacteraceae ba... 112 2e-23 ref|YP_001098742.1| hypothetical protein HEAR0391 [Herminiimonas... 111 5e-23 >ref|YP_003775697.1| universal stress protein [Herbaspirillum seropedicae SmR1] gb|ADJ63789.1| universal stress protein [Herbaspirillum seropedicae SmR1] Length = 145 Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 145/145 (100%), Positives = 145/145 (100%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG Sbjct: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 Query: 61 EAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKARST 120 EAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKARST Sbjct: 61 EAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKARST 120 Query: 121 LGRLLMGSQTQKLLARSKVPVLVFR 145 LGRLLMGSQTQKLLARSKVPVLVFR Sbjct: 121 LGRLLMGSQTQKLLARSKVPVLVFR 145 >ref|YP_001100591.1| universal stress family protein [Herminiimonas arsenicoxydans] emb|CAL62469.1| putative universel stress protein UspA-like [Herminiimonas arsenicoxydans] Length = 140 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/145 (45%), Positives = 90/145 (62%), Gaps = 5/145 (3%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 M K ILLATDGS L ++V AAI A S GS +VGLSV A PE+ + D+ Sbjct: 1 MLKTILLATDGSDLSKKAVTAAIDFAASYGSKIVGLSV-----AEVFPELFLDYDLRAIE 55 Query: 61 EAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKARST 120 E + RA++ + E A++ GV C V G PY+EI++ A HCDAIFMAS + Sbjct: 56 EDMQKRAVSDANFVEECAKKAGVACEVHTVTGVHPYQEIIKAANDFHCDAIFMASHGKKG 115 Query: 121 LGRLLMGSQTQKLLARSKVPVLVFR 145 + ++L+GS+TQK+LA S +PVLV+R Sbjct: 116 IDKILLGSETQKVLAHSTIPVLVYR 140 >ref|YP_004751364.1| Universal stress protein [Collimonas fungivorans Ter331] gb|AEK60541.1| Universal stress protein [Collimonas fungivorans Ter331] Length = 158 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/145 (43%), Positives = 86/145 (59%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 MFK IL+ TDGS L ++++ AI AK ++ LSV+ + E ++ D Sbjct: 14 MFKTILVPTDGSHLSDKAINTAIEFAKFSSGRIIALSVAEPYPFSPMAESTMATDPGTYE 73 Query: 61 EAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKARST 120 E A A +V+ + + AR GVPC + AQ P EEI+ AE+ HCDAIFMAS RS Sbjct: 74 ENMLALAKLNVQKVADAARNAGVPCEMLTAQAFNPDEEIISAAEKYHCDAIFMASHGRSG 133 Query: 121 LGRLLMGSQTQKLLARSKVPVLVFR 145 L RL +GS+TQ++LA S +PVLV R Sbjct: 134 LSRLFLGSKTQRVLAHSTIPVLVLR 158 >ref|YP_003775807.1| universal stress protein [Herbaspirillum seropedicae SmR1] gb|ADJ63899.1| universal stress protein [Herbaspirillum seropedicae SmR1] Length = 157 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 +FK IL+ TDGS +V+AA+ AK GSSLVGLSV+ ++ ++ + ++ + Sbjct: 14 IFKKILVPTDGSDASERAVQAAVQFAKESGSSLVGLSVAEDIVQWAVID-GTAINYLQVE 72 Query: 61 EAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKARST 120 A ++V + +A+ VPC + PYEEI+ A +HCDAIFMAS R Sbjct: 73 NEILENAKSNVARLAALAKSADVPCETFTVKAVHPYEEILAHASHQHCDAIFMASHGRKG 132 Query: 121 LGRLLMGSQTQKLLARSKVPVLVFR 145 L R ++GSQTQK+LA + +PVLVFR Sbjct: 133 LERFILGSQTQKVLANATIPVLVFR 157 >ref|YP_003777268.1| universal stress protein [Herbaspirillum seropedicae SmR1] emb|CAM32578.1| Universal stress protein [Herbaspirillum seropedicae] gb|ADJ65360.1| universal stress protein [Herbaspirillum seropedicae SmR1] Length = 145 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 87/145 (60%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 MFK IL+ TDGS ++++ A+ AK+ G+ L+G++V+ + E S+ +D A Sbjct: 1 MFKTILVPTDGSERSDKAIATAVDYAKNSGARLIGITVAEPYPFSPLAESSMAIDPALYE 60 Query: 61 EAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKARST 120 E + A ++ IT+ A GVPC ++ P EEI++ A+ CDAIFMAS RS Sbjct: 61 ENVKTLAQQHIKKITDAATAAGVPCQTEIVMSFNPDEEIIKAAQLHACDAIFMASHGRSG 120 Query: 121 LGRLLMGSQTQKLLARSKVPVLVFR 145 L R+ +GS+TQK+L S +PVLV R Sbjct: 121 LSRIFLGSKTQKVLTHSTIPVLVLR 145 >ref|YP_001100600.1| universal stress family protein [Herminiimonas arsenicoxydans] emb|CAL62478.1| Putative universel stress protein UspA [Herminiimonas arsenicoxydans] Length = 143 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/148 (44%), Positives = 96/148 (64%), Gaps = 8/148 (5%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 MFK ILLATDGS+L +++V+A + AK GS +VGLSV+ L +P G++ A +G Sbjct: 1 MFKKILLATDGSKLSDKAVQATLQFAKEHGSKIVGLSVATIYPYLPVP----GME-AISG 55 Query: 61 EAGRA---RALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKA 117 E A +A +VE I+ +A GV V VA+G EEI++ A + HCD+IFMAS Sbjct: 56 EFVDAITNQAEKNVEKISALAASLGVDAEVHVAEGSSACEEIIKTAAKYHCDSIFMASHG 115 Query: 118 RSTLGRLLMGSQTQKLLARSKVPVLVFR 145 R+ L +L++GS+ QK+LA SK+PV + + Sbjct: 116 RTGLDKLMLGSEAQKVLAYSKLPVTIIK 143 >ref|ZP_04577433.1| universal stress protein UspA [Oxalobacter formigenes HOxBLS] gb|EEO28395.1| universal stress protein UspA [Oxalobacter formigenes HOxBLS] Length = 145 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 93/151 (61%), Gaps = 12/151 (7%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKS-CGSSLVGLSVSGNLRALSIPEVSVGVDVARA 59 M++ IL+ TDGS L +++ AAI AKS G +VG SV+ LS ++ + ++ Sbjct: 1 MYRKILVPTDGSVLSEKAIAAAIEFAKSHAGCEIVGFSVA---EPLSFNQIE---SLTKS 54 Query: 60 GEAG-----RARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMA 114 GE+ + A + V+ I E+A+ GVPC V Q +P+EEI+R A HCD IFMA Sbjct: 55 GESDYMVREQLSAQSRVQRIAELAKAAGVPCETVVTQSTKPHEEIVRAASEYHCDCIFMA 114 Query: 115 SKARSTLGRLLMGSQTQKLLARSKVPVLVFR 145 S R L +L +GS+TQK+LA ++VPVLV+R Sbjct: 115 SNGRKGLNKLFIGSETQKVLATAQVPVLVYR 145 >ref|YP_001099866.1| universal stress protein [Herminiimonas arsenicoxydans] emb|CAL61739.1| putative universal stress protein UspA [Herminiimonas arsenicoxydans] Length = 143 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 86/148 (58%), Gaps = 8/148 (5%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 MFK ILLATDGS L +++V+AA+ AK GS +VGLSV A P V A +G Sbjct: 1 MFKKILLATDGSELSDKAVQAALQFAKEHGSKIVGLSV-----ATIYPYFPVYGMEATSG 55 Query: 61 EAGRA---RALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKA 117 E +A A V I A GV V V +G +EI++ A++ HCDAIFMAS Sbjct: 56 EFAQAISKEAEKYVHKIATHAASLGVDAEVHVVEGTSASDEIIKAADKYHCDAIFMASHG 115 Query: 118 RSTLGRLLMGSQTQKLLARSKVPVLVFR 145 R L + L+GS+ QK+L SK+PV +F+ Sbjct: 116 RKGLDKFLLGSEAQKVLVHSKLPVTIFK 143 >ref|ZP_08276002.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30529.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480] Length = 145 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 85/145 (58%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGVDVARAG 60 MFK IL+ TDGS L ++++ AAI A+ G+ +VGLSV+ + E ++ +D Sbjct: 1 MFKTILVPTDGSALSDKAIHAAIEFAQLTGARIVGLSVAEPYPYSPLSEGAITIDSTAYQ 60 Query: 61 EAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKARST 120 E A ++V I + A V C V + PYEEI+ VA+ CD +FMAS R Sbjct: 61 EKMLEIARSNVRQIADAASAANVTCETHVRESFSPYEEIVSVADLHGCDVVFMASHGRKG 120 Query: 121 LGRLLMGSQTQKLLARSKVPVLVFR 145 L +L +GS+TQK+LA S +PVLVFR Sbjct: 121 LNKLFVGSETQKVLAHSTLPVLVFR 145 >ref|YP_001098742.1| hypothetical protein HEAR0391 [Herminiimonas arsenicoxydans] emb|CAL60613.1| Universal stress protein UspA [Herminiimonas arsenicoxydans] Length = 147 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 4/148 (2%) Query: 1 MFKNILLATDGSRLCNESVKAAIALAKSCGSSLVGLSVSGNLRALSIPEVSVGV---DVA 57 MFK IL+ TDGS L ++++ AAI AK+ LV L V+ ++ E GV D Sbjct: 1 MFKKILVPTDGSPLSDKAITAAIEFAKTVNGELVTLCVAEPYVYSALVE-GAGVFPMDSV 59 Query: 58 RAGEAGRARALASVEMITEMARQEGVPCSVQVAQGGRPYEEIMRVAEREHCDAIFMASKA 117 E + A +V+ +AR +GV C VA PYEEI+R AE CD IFMAS Sbjct: 60 AYDEKAQEIAQHNVDKAAALARAQGVTCKTAVALSFSPYEEIVRTAEASACDVIFMASHG 119 Query: 118 RSTLGRLLMGSQTQKLLARSKVPVLVFR 145 R L +L +GS+TQK+LA S +PVLVFR Sbjct: 120 RKGLNKLFVGSETQKVLAHSTIPVLVFR 147