BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0310.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775694.1| glutamine ABC transporter permease [Herbaspi... 270 1e-70 ref|YP_547890.1| amino acid ABC transporter permease [Polaromona... 209 3e-52 ref|ZP_04761968.1| polar amino acid ABC transporter, inner membr... 200 1e-49 ref|NP_889180.1| glutamine transport system permease [Bordetella... 196 3e-48 ref|ZP_08871581.1| amino acid ABC transporter permease [Verminep... 196 3e-48 ref|YP_003978889.1| amino ABC transporter permease, 3-TM region,... 194 1e-47 gb|EGP43313.1| amino ABC transporter permease protein [Achromoba... 193 1e-47 ref|YP_004152520.1| polar amino acid ABC transporter inner membr... 193 1e-47 gb|EFV86389.1| polar amino acid transport system permease [Achro... 193 2e-47 ref|YP_002942091.1| polar amino acid ABC transporter inner membr... 191 6e-47 >ref|YP_003775694.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63786.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 221 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 138/149 (92%), Positives = 139/149 (93%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL Sbjct: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM Sbjct: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 Query: 121 EAARSLGLPYRMAM----YPAAGLRTHDP 145 EAARSLGLPYRMAM P A +R P Sbjct: 121 EAARSLGLPYRMAMRRVILPQAFVRMIPP 149 >ref|YP_547890.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gb|ABE42992.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 99/149 (66%), Positives = 125/149 (83%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M+LDFS +W WP L+ G LVTVEITAASL++GCV+GLLVG+GRL+P+RR++YGLCT Y+ Sbjct: 1 MELDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYV 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 ++RGTPLLVQLF+ FFGLP G++LPA+VCG++GLGIYSGAYVSE+VRGAIQSI+RGQM Sbjct: 61 AIIRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQM 120 Query: 121 EAARSLGLPYRMAM----YPAAGLRTHDP 145 EAARS+G+ +AM P A +R P Sbjct: 121 EAARSIGMSSGLAMRAVVLPQAVVRMIPP 149 >ref|ZP_04761968.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gb|EER61252.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 222 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 97/149 (65%), Positives = 122/149 (81%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M+LDFS VW P L+ G +VTVEITAASL++GCV+GLLVG+GRL+P+RRV+Y LCT Y+ Sbjct: 1 MELDFSPVWAGLPQLLAGAVVTVEITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYV 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 +RGTPLLVQLF+ FFGLP G++LPA+VCG++GLGIYSGAYVSE+VRGAIQSI++GQM Sbjct: 61 AAIRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDKGQM 120 Query: 121 EAARSLGLPYRMAM----YPAAGLRTHDP 145 EAARS+G+ +AM P A +R P Sbjct: 121 EAARSIGMSSGLAMRTVVLPQAVVRMIPP 149 >ref|NP_889180.1| glutamine transport system permease [Bordetella bronchiseptica RB50] emb|CAE33136.1| glutamine transport system permease [Bordetella bronchiseptica RB50] Length = 222 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 94/149 (63%), Positives = 119/149 (79%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M LDF+ V+ + +L+ G +VTVE+TA +L++GCV+GLLVG+GRL+PQRR IY LC++YL Sbjct: 1 MMLDFAPVFADFDALLRGAVVTVEVTACALLLGCVIGLLVGVGRLNPQRRFIYNLCSVYL 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 RGTPLLVQLF+WFFGLP G+ LPA+ CG+LGLGIYSGAYVSEIVRGAIQS++RGQM Sbjct: 61 LFFRGTPLLVQLFIWFFGLPQFGITLPAFACGVLGLGIYSGAYVSEIVRGAIQSVDRGQM 120 Query: 121 EAARSLGLP----YRMAMYPAAGLRTHDP 145 EAARSLG+ R+ + P A +R P Sbjct: 121 EAARSLGMSSAQAMRIIILPQAVVRMIPP 149 >ref|ZP_08871581.1| amino acid ABC transporter permease [Verminephrobacter sp. At4] Length = 222 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/149 (63%), Positives = 119/149 (79%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M+LDFS VW + P L G LV+VEITAA+L++GC +GLLVG+GRL PQRRV+YGLCT Y+ Sbjct: 1 MELDFSPVWAAAPQLFSGALVSVEITAAALLLGCAMGLLVGIGRLDPQRRVVYGLCTAYV 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 +RGTPLLVQLF+ FFGLP G++LPA+ CG++GLGIY+GAYVSEIVRGAI S+++GQM Sbjct: 61 AAIRGTPLLVQLFILFFGLPQFGILLPAFACGVIGLGIYAGAYVSEIVRGAIASVDKGQM 120 Query: 121 EAARSLGLPYRMAM----YPAAGLRTHDP 145 EAARS+G+ +AM P A LR P Sbjct: 121 EAARSIGMSSGLAMRSVVLPQAVLRMIPP 149 >ref|YP_003978889.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 6 [Achromobacter xylosoxidans A8] gb|ADP16174.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 6 [Achromobacter xylosoxidans A8] Length = 222 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 93/149 (62%), Positives = 120/149 (80%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M LDFS V+ + +L++G +VTVE+TA +L++ CV+GLLVG+GRL+P+R VIY LC++YL Sbjct: 1 MNLDFSPVFADFGALINGAVVTVEVTAGALLLACVIGLLVGVGRLNPKRYVIYNLCSVYL 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 L RGTPLLVQLF+WFFGLPH G+ LPA+ CG+LGLG+YSGAYVSEIVRGAIQS++RGQ Sbjct: 61 LLFRGTPLLVQLFIWFFGLPHFGITLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQT 120 Query: 121 EAARSLGLP----YRMAMYPAAGLRTHDP 145 EAARSLG+ R+ + P A +R P Sbjct: 121 EAARSLGMSSGQAMRIIVLPQAVVRMIPP 149 >gb|EGP43313.1| amino ABC transporter permease protein [Achromobacter xylosoxidans AXX-A] Length = 222 Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 93/149 (62%), Positives = 118/149 (79%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M LDF+ V+ + +LV G +VTVE+TA +L++GCV+GLLVG+GRL+PQR +IY LC++YL Sbjct: 1 MNLDFAPVFADFDALVRGAVVTVEVTAGALLLGCVIGLLVGVGRLNPQRSIIYNLCSVYL 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 RGTPLLVQLF+WFFGLP GV LPA+ CG+LGLG+YSGAYVSEIVRGAIQS++RGQ Sbjct: 61 LFFRGTPLLVQLFIWFFGLPQFGVTLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQT 120 Query: 121 EAARSLGLP----YRMAMYPAAGLRTHDP 145 EAARSLG+ R+ + P A +R P Sbjct: 121 EAARSLGMSSGQAMRIIILPQAVVRMIPP 149 >ref|YP_004152520.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus EPS] gb|ADU34409.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 222 Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 95/149 (63%), Positives = 120/149 (80%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M LDFS VW+ WP L+ G LVTVEITA +L +GCVLGL+VG+GRL+P+RR IY +CT Y+ Sbjct: 1 MDLDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLIVGIGRLNPKRRWIYSVCTAYV 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 ++RGTPLLVQLF+ FFGLPH G++LPA++CG+LGLG+YSGAYVSEIVRGAIQSI++GQ Sbjct: 61 AVIRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQT 120 Query: 121 EAARSLGLPYRMAM----YPAAGLRTHDP 145 AA+SLG+ +AM P A +R P Sbjct: 121 MAAQSLGMTPGVAMREIVLPQAVVRMIPP 149 >gb|EFV86389.1| polar amino acid transport system permease [Achromobacter xylosoxidans C54] Length = 222 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 92/149 (61%), Positives = 118/149 (79%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M LDF+ V+ + +LV G +VT+E+TA +L++GCV+GLLVG+GRL+PQR +IY LC++YL Sbjct: 1 MNLDFAPVFADFDALVRGAVVTIEVTAGALLLGCVIGLLVGVGRLNPQRSIIYNLCSVYL 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 RGTPLLVQLF+WFFGLP GV LPA+ CG+LGLG+YSGAYVSEIVRGAIQS++RGQ Sbjct: 61 LFFRGTPLLVQLFIWFFGLPQFGVTLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQT 120 Query: 121 EAARSLGLP----YRMAMYPAAGLRTHDP 145 EAARSLG+ R+ + P A +R P Sbjct: 121 EAARSLGMSSGQAMRIIILPQAVVRMIPP 149 >ref|YP_002942091.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gb|ACS16825.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 222 Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 94/149 (63%), Positives = 117/149 (78%), Gaps = 4/149 (2%) Query: 1 MKLDFSGVWESWPSLVHGTLVTVEITAASLVVGCVLGLLVGLGRLSPQRRVIYGLCTIYL 60 M DFS VW+ WP L+ G LVTVEITA +L +GCVLGLLVG+GRL+P+RR +YG CT Y+ Sbjct: 1 MDFDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWLYGACTAYV 60 Query: 61 TLVRGTPLLVQLFLWFFGLPHVGVILPAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQM 120 +RGTPLLVQLF+ FFGLPH G++LPA++CG+LGLG+YSGAYVSEIVRGAIQSI++GQ Sbjct: 61 AAIRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQT 120 Query: 121 EAARSLGLP----YRMAMYPAAGLRTHDP 145 AA+SLG+ R + P A +R P Sbjct: 121 MAAQSLGMTPGTAMREIVLPQAVVRMIPP 149