BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0309.p (251 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775693.1| glutamine ABC transporter periplasmic protei... 513 e-143 ref|YP_724567.1| ABC transporter periplasmic protein [Ralstonia ... 305 3e-81 ref|ZP_08871580.1| ABC transporter periplasmic subunit [Verminep... 305 6e-81 ref|YP_004683894.1| ABC transporter permease [Cupriavidus necato... 304 9e-81 ref|ZP_04761969.1| extracellular solute-binding protein family 3... 303 2e-80 ref|YP_001795408.1| high-affinity glutamine transporter, ABC tra... 301 5e-80 ref|YP_004127392.1| extracellular solute-binding protein family ... 301 6e-80 ref|YP_004387601.1| ABC transporter periplasmic subunit [Alicycl... 300 9e-80 ref|YP_295804.1| extracellular solute-binding protein [Ralstonia... 300 1e-79 ref|YP_547891.1| extracellular solute-binding protein [Polaromon... 297 8e-79 >ref|YP_003775693.1| glutamine ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63785.1| ABC-type glutamine transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 251 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 251/251 (100%), Positives = 251/251 (100%) Query: 1 MKTFSKLLCAGMASLSLLIAAVPAAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIE 60 MKTFSKLLCAGMASLSLLIAAVPAAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIE Sbjct: 1 MKTFSKLLCAGMASLSLLIAAVPAAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIE 60 Query: 61 ALAKTMGKKVQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVL 120 ALAKTMGKKVQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVL Sbjct: 61 ALAKTMGKKVQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVL 120 Query: 121 VRRDDNSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVN 180 VRRDDNSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVN Sbjct: 121 VRRDDNSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVN 180 Query: 181 AVVTGRPAAVEYARTQPLVRVLDKGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYT 240 AVVTGRPAAVEYARTQPLVRVLDKGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYT Sbjct: 181 AVVTGRPAAVEYARTQPLVRVLDKGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYT 240 Query: 241 ALTDKWFGKSE 251 ALTDKWFGKSE Sbjct: 241 ALTDKWFGKSE 251 >ref|YP_724567.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] emb|CAJ91199.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 251 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 145/245 (59%), Positives = 189/245 (77%), Gaps = 1/245 (0%) Query: 6 KLLCAGMASLSLLIAAVPAAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKT 65 K L AG+A+L+ L A + V+RV TDATFPPMEF+++GKRTGFDVEL+EA+AKT Sbjct: 6 KCLMAGLATLTALTLGTAAQAQDNAVLRVATDATFPPMEFIENGKRTGFDVELVEAMAKT 65 Query: 66 MGKKVQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDD 125 MGK+V+W DIDFKGLIPGLVS RFD+A S IY+T ERRKVV+F++PYY GGL LV+ + Sbjct: 66 MGKRVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFTEPYYVGGLVALVKSGN 125 Query: 126 NSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTG 185 ++ P DLN GK+VSVQVGTKSV +L+D +P V+RVEVEKNQ MF+L+ GR +A VTG Sbjct: 126 TTVHAPADLN-GKKVSVQVGTKSVSFLRDTYPQVQRVEVEKNQEMFNLVEIGRADAAVTG 184 Query: 186 RPAAVEYARTQPLVRVLDKGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYTALTDK 245 +PAA++Y +T+ +R++++ LTTE YG A+RK ELT LN AL ++ +GTY LT K Sbjct: 185 KPAAMQYVKTRGGLRMVEQQLTTEEYGMAVRKDTPELTRALNAALAKVKADGTYARLTQK 244 Query: 246 WFGKS 250 WFG + Sbjct: 245 WFGTA 249 >ref|ZP_08871580.1| ABC transporter periplasmic subunit [Verminephrobacter sp. At4] Length = 250 Score = 305 bits (780), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 149/237 (62%), Positives = 181/237 (76%), Gaps = 1/237 (0%) Query: 12 MASLSLLIAAVPAAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKTMGKKVQ 71 + SL+ L+ P A A +RVGTDATF PMEFV +GKRTGFD+EL+EA+AK MG++++ Sbjct: 9 LLSLAALVLCGPGAQAQDSPLRVGTDATFAPMEFVDNGKRTGFDIELVEAVAKNMGRRLE 68 Query: 72 WIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDDNSIKVP 131 W+DIDFKGLIPGL+S RFD+A SAIY+TDERRKVV+FS PYY GGL VLVR + +IK P Sbjct: 69 WVDIDFKGLIPGLLSKRFDMAVSAIYITDERRKVVDFSAPYYTGGLVVLVREGNTAIKKP 128 Query: 132 EDLNKGKRVSVQVGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTGRPAAVE 191 DL+ GK+VSVQVGTKSVG+L PGV+RVEVEKNQ MF+L+ GR +A VTG+PAA Sbjct: 129 ADLD-GKKVSVQVGTKSVGFLTQQHPGVQRVEVEKNQEMFNLVDIGRADAAVTGKPAAFH 187 Query: 192 YARTQPLVRVLDKGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYTALTDKWFG 248 Y RT+ +RVLD LTTE YG ALRK ELT +N AL LR +GTY + KWFG Sbjct: 188 YVRTRSGLRVLDAPLTTEEYGMALRKDTPELTQAVNAALANLRADGTYAEIVKKWFG 244 >ref|YP_004683894.1| ABC transporter permease [Cupriavidus necator N-1] gb|AEI75413.1| ABC transport system permease protein PAAT family [Cupriavidus necator N-1] Length = 251 Score = 304 bits (778), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 144/245 (58%), Positives = 188/245 (76%), Gaps = 1/245 (0%) Query: 6 KLLCAGMASLSLLIAAVPAAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKT 65 K L AG+A+L+ L A + V+RV TDATFPPMEF+++GKRTGFDVEL+EA+AKT Sbjct: 6 KCLMAGLATLTALTLGTAAHAQDNAVLRVATDATFPPMEFIENGKRTGFDVELVEAMAKT 65 Query: 66 MGKKVQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDD 125 MGK+V+W DIDFKGLIPGLVS RFD+A S IY+T ER KVV+F++PYY GGL LV+ + Sbjct: 66 MGKRVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERSKVVDFTEPYYTGGLVALVKSGN 125 Query: 126 NSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTG 185 ++ P DLN GK+VSVQVGTKSV +L+D +P V+RVEVEKNQ MF+L+ GR +A VTG Sbjct: 126 TTVHAPADLN-GKKVSVQVGTKSVSFLRDTYPQVQRVEVEKNQEMFNLVEIGRADAAVTG 184 Query: 186 RPAAVEYARTQPLVRVLDKGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYTALTDK 245 +PAA++Y +T+ +R++++ LTTE YG A+RK ELT LN AL ++ +GTY LT K Sbjct: 185 KPAAMQYVKTRGGLRMVEQPLTTEEYGMAVRKDTPELTRALNAALAKVKADGTYAKLTQK 244 Query: 246 WFGKS 250 WFG + Sbjct: 245 WFGTA 249 >ref|ZP_04761969.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] gb|EER61253.1| extracellular solute-binding protein family 3 [Acidovorax delafieldii 2AN] Length = 249 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 144/225 (64%), Positives = 179/225 (79%), Gaps = 1/225 (0%) Query: 26 HANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKTMGKKVQWIDIDFKGLIPGLV 85 A V+RVGTDATFPPMEFV++GKRTGFD+EL+EA+AKTMGK+V+W+DIDFKGLIPGL+ Sbjct: 23 QAQDNVLRVGTDATFPPMEFVENGKRTGFDIELVEAIAKTMGKQVEWVDIDFKGLIPGLI 82 Query: 86 SNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDDNSIKVPEDLNKGKRVSVQVG 145 S RFD+A SAIY+TDER+KVV+F+D YY GGL V+V+ D+ +I DL+ GK+VSVQVG Sbjct: 83 SKRFDMAVSAIYITDERKKVVDFTDSYYAGGLVVMVKADNKAINKLADLD-GKKVSVQVG 141 Query: 146 TKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTGRPAAVEYARTQPLVRVLDKG 205 TKSV YL + FP V+RVEVEKNQ MF+L+ GR +A VTG+PAA +Y RT+P +RVLD+ Sbjct: 142 TKSVAYLTEKFPKVQRVEVEKNQEMFNLVDIGRADAAVTGKPAAFQYVRTRPGLRVLDEQ 201 Query: 206 LTTELYGFALRKSDTELTAQLNKALQTLRMNGTYTALTDKWFGKS 250 LTTE YG ALRK ELT N A+ L+ +GTY A+ KWF S Sbjct: 202 LTTEEYGMALRKDTPELTKAFNGAINKLKADGTYAAIVKKWFSNS 246 >ref|YP_001795408.1| high-affinity glutamine transporter, ABC transporter substrate-binding protein peri_bind) [Cupriavidus taiwanensis LMG 19424] emb|CAP62686.1| high-affinity glutamine transport protein, ABC transporter, periplasmic binding component peri_bind) [Cupriavidus taiwanensis LMG 19424] Length = 251 Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 144/245 (58%), Positives = 188/245 (76%), Gaps = 1/245 (0%) Query: 6 KLLCAGMASLSLLIAAVPAAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKT 65 K L A +++++ L A + V+RV TDATFPPMEF+++GKRTGFDVEL+EA+AKT Sbjct: 6 KCLIAALSAVAGLTFGASAHAQDSNVLRVATDATFPPMEFIENGKRTGFDVELVEAMAKT 65 Query: 66 MGKKVQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDD 125 MGK+V+W +IDFKGLIPGLVS RFD+A S IY+T ERRKVV+F++PYY GGL LV+ + Sbjct: 66 MGKQVEWTNIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFTEPYYTGGLVALVKSGN 125 Query: 126 NSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTG 185 +I PEDLN GK+VSVQVGTKSV +L+D +P V RVEVEKNQ MF+L+ GR +A VTG Sbjct: 126 TAINKPEDLN-GKKVSVQVGTKSVSFLRDTYPQVTRVEVEKNQEMFNLVEIGRADAAVTG 184 Query: 186 RPAAVEYARTQPLVRVLDKGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYTALTDK 245 +PAA++Y +T+ +RV+++ LTTE YG A+RK ELT LN AL ++ +GTY LT K Sbjct: 185 KPAAMQYVKTRGGLRVVEQQLTTEEYGMAVRKDTPELTRALNAALAKVKADGTYAKLTQK 244 Query: 246 WFGKS 250 WFG + Sbjct: 245 WFGSA 249 >ref|YP_004127392.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] gb|ADV00505.1| extracellular solute-binding protein family 3 [Alicycliphilus denitrificans BC] Length = 251 Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 141/217 (64%), Positives = 178/217 (82%), Gaps = 1/217 (0%) Query: 31 VIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKTMGKKVQWIDIDFKGLIPGLVSNRFD 90 V+RVGTDATFPPMEFV++GKRTGFD+EL+EA+AK MGK+V+W+DIDFKGLIPGL+S RFD Sbjct: 29 VLRVGTDATFPPMEFVENGKRTGFDIELVEAIAKAMGKQVEWVDIDFKGLIPGLISRRFD 88 Query: 91 IAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDDNSIKVPEDLNKGKRVSVQVGTKSVG 150 +A SAIY+TDERRKVV+F++PYY GGL +V+ + SI+ DL+ GKRVSVQVGTKSVG Sbjct: 89 MAVSAIYITDERRKVVDFTEPYYAGGLVAMVKESNTSIRKLSDLD-GKRVSVQVGTKSVG 147 Query: 151 YLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTGRPAAVEYARTQPLVRVLDKGLTTEL 210 +L N+P V+R+EVEKNQ MF+L+ GR +A VTG+PAA +Y RT+P +RVL++ LTTE Sbjct: 148 FLTQNYPKVQRIEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPGLRVLEEQLTTEE 207 Query: 211 YGFALRKSDTELTAQLNKALQTLRMNGTYTALTDKWF 247 YG ALRK ELT +N AL L+ +GTY A+ KWF Sbjct: 208 YGMALRKDTPELTKAVNAALARLKADGTYAAIVKKWF 244 >ref|YP_004387601.1| ABC transporter periplasmic subunit [Alicycliphilus denitrificans K601] gb|AEB84085.1| ABC-type transporter, periplasmic subunit family 3 [Alicycliphilus denitrificans K601] Length = 251 Score = 300 bits (769), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 141/217 (64%), Positives = 178/217 (82%), Gaps = 1/217 (0%) Query: 31 VIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKTMGKKVQWIDIDFKGLIPGLVSNRFD 90 V+RVGTDATFPPMEFV++GKRTGFD+EL+EA+AK MGK+V+W+DIDFKGLIPGL+S RFD Sbjct: 29 VLRVGTDATFPPMEFVENGKRTGFDIELVEAIAKAMGKQVEWVDIDFKGLIPGLISRRFD 88 Query: 91 IAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDDNSIKVPEDLNKGKRVSVQVGTKSVG 150 +A SAIY+TDERRKVV+F++PYY GGL +V+ + SI+ DL+ GKRVSVQVGTKSVG Sbjct: 89 MAVSAIYITDERRKVVDFTEPYYAGGLVAMVKEGNTSIRKLSDLD-GKRVSVQVGTKSVG 147 Query: 151 YLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTGRPAAVEYARTQPLVRVLDKGLTTEL 210 +L N+P V+R+EVEKNQ MF+L+ GR +A VTG+PAA +Y RT+P +RVL++ LTTE Sbjct: 148 FLTQNYPKVQRIEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRPGLRVLEEQLTTEE 207 Query: 211 YGFALRKSDTELTAQLNKALQTLRMNGTYTALTDKWF 247 YG ALRK ELT +N AL L+ +GTY A+ KWF Sbjct: 208 YGMALRKDTPELTKAVNAALARLKADGTYAAIVKKWF 244 >ref|YP_295804.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gb|AAZ60960.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ralstonia eutropha JMP134] Length = 252 Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 145/245 (59%), Positives = 187/245 (76%), Gaps = 1/245 (0%) Query: 6 KLLCAGMASLSLLIAAVPAAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKT 65 K L AG+ +L L A + V+RV TDATFPPMEF+++GKRTGFDVEL+EA+AKT Sbjct: 6 KCLMAGLTALIGLTFGAAAHAEDNAVLRVATDATFPPMEFIENGKRTGFDVELVEAMAKT 65 Query: 66 MGKKVQWIDIDFKGLIPGLVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDD 125 MGK+V+W DIDFKGLIPGLVS RFD+A S IY+T ERRKVV+F++PYY GGL LV+ + Sbjct: 66 MGKRVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFTEPYYTGGLVALVKSGN 125 Query: 126 NSIKVPEDLNKGKRVSVQVGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTG 185 +I P DLN GK+VSVQVGTKSV +L+D +P V+RVEVEKNQ MF+L+ GR +A VTG Sbjct: 126 TTIHAPADLN-GKKVSVQVGTKSVSFLRDTYPQVQRVEVEKNQEMFNLVEIGRADAAVTG 184 Query: 186 RPAAVEYARTQPLVRVLDKGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYTALTDK 245 +PAA++Y +T+ +R++++ LTTE YG A+RK ELT LN AL ++ +GTY LT K Sbjct: 185 KPAAMQYVKTRGGLRMVEQPLTTEEYGMAVRKDMPELTRALNAALVKVKADGTYAKLTQK 244 Query: 246 WFGKS 250 WFG + Sbjct: 245 WFGTA 249 >ref|YP_547891.1| extracellular solute-binding protein [Polaromonas sp. JS666] gb|ABE42993.1| amino acid ABC transporter substrate-binding protein, PAAT family [Polaromonas sp. JS666] Length = 249 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 139/227 (61%), Positives = 182/227 (80%), Gaps = 1/227 (0%) Query: 24 AAHANGEVIRVGTDATFPPMEFVKDGKRTGFDVELIEALAKTMGKKVQWIDIDFKGLIPG 83 +AHA +RVGTDATFPPMEFV++GKRTGFDVEL+EA+AK MGK+V+W+DIDFKGLIPG Sbjct: 21 SAHAQDNALRVGTDATFPPMEFVENGKRTGFDVELVEAIAKAMGKQVEWVDIDFKGLIPG 80 Query: 84 LVSNRFDIAASAIYMTDERRKVVNFSDPYYRGGLAVLVRRDDNSIKVPEDLNKGKRVSVQ 143 L+S RFD+A SAIY+TDER+KVV+F++ YY GGL + + + +IK DL +GK+V+VQ Sbjct: 81 LMSKRFDMAVSAIYITDERKKVVDFTNSYYAGGLVAMTKEGNTAIKKLADL-EGKKVTVQ 139 Query: 144 VGTKSVGYLKDNFPGVERVEVEKNQAMFDLLATGRVNAVVTGRPAAVEYARTQPLVRVLD 203 VGTKSVGYL++++P V+R+EVEKNQ MF+L+ GR +A VTG+PAA +Y RT+P +RVL+ Sbjct: 140 VGTKSVGYLQEHYPKVQRIEVEKNQEMFNLVDIGRADAAVTGKPAAFQYVRTRPGLRVLE 199 Query: 204 KGLTTELYGFALRKSDTELTAQLNKALQTLRMNGTYTALTDKWFGKS 250 + LTTE YG ALRK ELT +N A+ L+ +GTY A+ KWF S Sbjct: 200 EQLTTEEYGMALRKDTPELTRAVNGAIAKLKADGTYAAIVKKWFSNS 246