BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0299.p (855 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775684.1| ATP-dependent helicase superfamily II protei... 1686 0.0 ref|YP_001020714.1| helicase [Methylibium petroleiphilum PM1] >g... 1069 0.0 ref|YP_004157763.1| dead/h associated domain-containing protein ... 1040 0.0 ref|ZP_07674333.1| helicase domain protein [Ralstonia sp. 5_7_47... 1038 0.0 ref|YP_004474141.1| DEAD/DEAH box helicase [Pseudomonas fulva 12... 1030 0.0 ref|YP_001173155.1| DEAD-box ATP dependent DNA helicase [Pseudom... 1018 0.0 gb|EGH66807.1| helicase domain-containing protein [Pseudomonas s... 1018 0.0 ref|ZP_03399004.1| helicase domain protein [Pseudomonas syringae... 1011 0.0 ref|YP_273640.1| helicase domain-containing protein [Pseudomonas... 1010 0.0 ref|ZP_07261378.1| helicase, C-terminal:DEAD/DEAH box helicase, ... 1006 0.0 >ref|YP_003775684.1| ATP-dependent helicase superfamily II protein [Herbaspirillum seropedicae SmR1] gb|ADJ63776.1| ATP-dependent helicase superfamily II protein [Herbaspirillum seropedicae SmR1] Length = 855 Score = 1686 bits (4365), Expect = 0.0, Method: Compositional matrix adjust. Identities = 849/855 (99%), Positives = 850/855 (99%) Query: 1 MPRNPRSSRASASACAGSAHAAQSALTAAEAWFQRRGWQVFDFQREVWQAAQQGRSGLLH 60 MPRNPRSSRASASACAGSAHAAQSALTAAE WFQRRGWQVFDFQREVWQAAQQGRSGLLH Sbjct: 1 MPRNPRSSRASASACAGSAHAAQSALTAAETWFQRRGWQVFDFQREVWQAAQQGRSGLLH 60 Query: 61 ASTGSGKTYAVWFGALLHAQPSLGQPTQGATTNGLRVLWITPMRALAADTLRALQEPLPE 120 ASTGSGKTYAVWFGALLHAQPSLGQPTQGATTNGLRVLWITPMRALAADTLRALQEPLPE Sbjct: 61 ASTGSGKTYAVWFGALLHAQPSLGQPTQGATTNGLRVLWITPMRALAADTLRALQEPLPE 120 Query: 121 LLPHWQAGMRTGDTGSSERARQMKALPQALVTTPESLSLLLSQADARQRFGKLDAVIVDE 180 LLPHWQAGMRTGDTGSSERARQMKALPQ LVTTPESLSLLLSQADARQRFGKLDAVIVDE Sbjct: 121 LLPHWQAGMRTGDTGSSERARQMKALPQVLVTTPESLSLLLSQADARQRFGKLDAVIVDE 180 Query: 181 WHELMGNKRGVQVQLALARLRRWRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRG 240 WHELMGNKRGVQVQLALARLRRWRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRG Sbjct: 181 WHELMGNKRGVQVQLALARLRRWRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRG 240 Query: 241 QQRKRILIDTLLPPQPARFAWAGHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNL 300 QQRKRILIDTLLPPQPARFAWAGHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNL Sbjct: 241 QQRKRILIDTLLPPQPARFAWAGHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNL 300 Query: 301 LEARPDWAGLIALHHGSLDREVREWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIG 360 LEARPDWAGLIALHHGSLDREVREWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIG Sbjct: 301 LEARPDWAGLIALHHGSLDREVREWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIG 360 Query: 361 SPRGVARLLGGAGRSGHAPGRVSRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPL 420 SPRGVARLL AGRSGHAPGRVSRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPL Sbjct: 361 SPRGVARLLQRAGRSGHAPGRVSRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPL 420 Query: 421 DVLVQHLVTIALGGGFRPDELFDEVRRAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQ 480 DVLVQHLVTIALGGGFRPDELFDEVR+AWSYRALREDQWQWALDFVVRGGQSLTAYPEYQ Sbjct: 421 DVLVQHLVTIALGGGFRPDELFDEVRQAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQ 480 Query: 481 RVQADAEGIYRVPQPAIATRHRLNIGTIVADASLHVQYLKGGRIGTIEEGFIARLRPGDR 540 RVQADAEGIYRVPQPAIATRHRLNIGTIVADASLHVQYLKGGRIGTIEEGFIARLRPGDR Sbjct: 481 RVQADAEGIYRVPQPAIATRHRLNIGTIVADASLHVQYLKGGRIGTIEEGFIARLRPGDR 540 Query: 541 FLFGGRVLEFVRVHEMTAWVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARF 600 FLFGGRVLEFVRVHEMTAWVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARF Sbjct: 541 FLFGGRVLEFVRVHEMTAWVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARF 600 Query: 601 DGPEMQAVEPLLALQHAWSALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAW 660 DGPEMQAVEPLLALQHAWSALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAW Sbjct: 601 DGPEMQAVEPLLALQHAWSALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAW 660 Query: 661 RLARQQAASFSIAVNDYGFELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELS 720 RLARQQAASFSIAVNDYGFELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELS Sbjct: 661 RLARQQAASFSIAVNDYGFELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELS 720 Query: 721 QRRFREIARIAGLVSQGYPGQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQE 780 QRRFREIARIAGLVSQGYPGQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQE Sbjct: 721 QRRFREIARIAGLVSQGYPGQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQE 780 Query: 781 LELERLRSTLAELRARTLTLVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELES 840 LEL RLRSTLAELRARTLTLVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELES Sbjct: 781 LELARLRSTLAELRARTLTLVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELES 840 Query: 841 AADASAGKTAARRRP 855 AADASAGKTAARRRP Sbjct: 841 AADASAGKTAARRRP 855 >ref|YP_001020714.1| helicase [Methylibium petroleiphilum PM1] gb|ABM94479.1| helicase [Methylibium petroleiphilum PM1] Length = 825 Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust. Identities = 562/818 (68%), Positives = 652/818 (79%), Gaps = 7/818 (0%) Query: 28 AAEAWFQRRGWQVFDFQREVWQAAQQGRSGLLHASTGSGKTYAVWFGALLHAQPSLGQPT 87 A + WF RGWQ F FQR VW AA +G SGLLHA+TG+GKTYAVWF AL A L Q Sbjct: 10 ALDGWFAARGWQPFAFQRRVWAAAARGHSGLLHATTGAGKTYAVWFAALGRA---LQQRA 66 Query: 88 QGAT-TNGLRVLWITPMRALAADTLRALQEPLPELLPHWQAGMRTGDTGSSERARQMKAL 146 G + GLRVLW+TPMRALAADT RAL+ PL EL+P W+ G+RTGDT SSERARQ K+ Sbjct: 67 AGTDDSRGLRVLWLTPMRALAADTQRALEAPLSELMPGWRVGLRTGDTPSSERARQAKSP 126 Query: 147 PQALVTTPESLSLLLSQADARQRFGKLDAVIVDEWHELMGNKRGVQVQLALARLRRWRPQ 206 P ALVTTPESLSL+LSQADA +R +D VIVDEWHELMGNKRGVQ QLALARLR W+P+ Sbjct: 127 PAALVTTPESLSLMLSQADAARRLQHVDMVIVDEWHELMGNKRGVQTQLALARLRHWQPR 186 Query: 207 MVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRGQQRKRILIDTLLPPQPARFAWAGHLG 266 +VVWGLSATLGNL ++ Q LLG D AQGVLV+G+ KR+++DTL+PP P+RF W GHLG Sbjct: 187 LVVWGLSATLGNLPRARQVLLG-DADAQGVLVQGRLPKRVVVDTLVPPNPSRFPWGGHLG 245 Query: 267 LQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNLLEARPDWAGLIALHHGSLDREVREWV 326 ++ML V+ EID ++TLVFTNTRSQAE+WYQ LL+ARPDWAG++ALHHGSLD +R WV Sbjct: 246 IEMLQPVIDEIDRHSTTLVFTNTRSQAEIWYQKLLDARPDWAGVLALHHGSLDPALRGWV 305 Query: 327 EQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIGSPRGVARLLGGAGRSGHAPGRVSRAT 386 E+GL+ GRLKAVV TSSLDLGVDF PVERVLQIGSP+GVARLL AGRSGHAPGRVSR T Sbjct: 306 EEGLKSGRLKAVVSTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRVSRLT 365 Query: 387 LVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPLDVLVQHLVTIALGGGFRPDELFDEVR 446 LVPT+SLEL+EAAAA AVAA ++E R P+ PLDVLVQHLVT+ALGGGFR +L EVR Sbjct: 366 LVPTHSLELLEAAAAIRAVAARRIESRRAPDKPLDVLVQHLVTVALGGGFRASDLLAEVR 425 Query: 447 RAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQRVQADAEGIYRVPQPAIATRHRLNIG 506 R +YR L + +WQWALDFV RGGQSL YPEY+RV D +G+YRVP AI RHR+ IG Sbjct: 426 RTDAYRTLTDVEWQWALDFVARGGQSLVVYPEYRRVLPDDDGMYRVPDAAIGRRHRMGIG 485 Query: 507 TIVADASLHVQYLKGGRIGTIEEGFIARLRPGDRFLFGGRVLEFVRVHEMTAWVRRSSSG 566 TIV+DA++ V+++ G R+G+IEE FIARLR GD FLFGGR LEFVR HEMTA+VR ++ Sbjct: 486 TIVSDAAMQVRFVNGTRLGSIEESFIARLRRGDHFLFGGRRLEFVRSHEMTAFVRPATGR 545 Query: 567 SGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARFDGPEMQAVEPLLALQHAWSALPTGQR 626 GAVPRWQGG+MPLSS LAHA L+RL+QAA+ RF GPEM+A+ PLL LQ WSALP Sbjct: 546 RGAVPRWQGGQMPLSSELAHAALERLQQAARDRFPGPEMRALRPLLELQARWSALPAADV 605 Query: 627 LVVEALKSREGHHLFFYPFAGRLVHMGLASLLAWRLARQQAASFSIAVNDYGFELLGAQQ 686 LV E ++SREG HLF YPFAGRLVH+GLA+LLA+R+ +Q ASFSIAVNDYGFELL A Sbjct: 606 LVAETMRSREGQHLFLYPFAGRLVHVGLAALLAYRVGARQPASFSIAVNDYGFELLSATP 665 Query: 687 APLEQLAA--HQAQTLFSDHDLLQDVLSSLNATELSQRRFREIARIAGLVSQGYPGQHKS 744 L A AQ L + LL+DVL+ LNATELS+RRFREIAR+AGLV QGYPGQ +S Sbjct: 666 VDWSALLATPEAAQRLLTTDALLEDVLAGLNATELSRRRFREIARVAGLVFQGYPGQARS 725 Query: 745 ARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQELELERLRSTLAELRARTLTLVRLQ 804 ARQLQASS+LFF+VF++HDA NLLL QA+REVLEQELEL RLR TL L R L L+ Sbjct: 726 ARQLQASSSLFFDVFQRHDAGNLLLGQAEREVLEQELELGRLRETLTALTQRRLAFFELR 785 Query: 805 RPTPFALPLMVERFREKLSTEKLADRVARMLRELESAA 842 R TPF PLMVER RE LSTE L DRVAR+LRELE AA Sbjct: 786 RATPFGFPLMVERLREALSTEALTDRVARLLRELERAA 823 >ref|YP_004157763.1| dead/h associated domain-containing protein [Variovorax paradoxus EPS] gb|ADU39652.1| DEAD/H associated domain protein [Variovorax paradoxus EPS] Length = 916 Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/852 (61%), Positives = 657/852 (77%), Gaps = 18/852 (2%) Query: 1 MPRNPRSSRASASACAGSAHAAQSALTAAEAWFQRRGWQVFDFQREVWQAAQQGRSGLLH 60 +P R + S G + ++AL A WF RGW F FQR+VW+A +G+SG+LH Sbjct: 29 LPVEGRVPPSQPSPGRGRSKTVKAALYA---WFVARGWTPFKFQRDVWKAIAEGKSGMLH 85 Query: 61 ASTGSGKTYAVWFGAL-LHAQPSLGQPTQGATTNGLRVLWITPMRALAADTLRALQEPLP 119 A+TG+GKTYAVW GAL + +Q + T + L VLW+TPMRALAADTLRAL++PL Sbjct: 86 ATTGAGKTYAVWLGALQVFSQAR--KETARPSAPPLTVLWLTPMRALAADTLRALKQPLE 143 Query: 120 EL---LPHWQAGMRTGDTGSSERARQMKALPQALVTTPESLSLLLSQADARQRFGKLDAV 176 L + W AG R+GDT S+ER+ Q + LP LVTTPESLSLLL++ADA G++ V Sbjct: 144 VLGAEVHPWSAGARSGDTSSAERSAQNERLPTVLVTTPESLSLLLARADASVVLGRVKMV 203 Query: 177 IVDEWHELMGNKRGVQVQLALARLRRWRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGV 236 +VDEWHEL+GNKRGVQVQLALARL+RW P + VWG+SATLGNL++++ +LLG + GV Sbjct: 204 VVDEWHELLGNKRGVQVQLALARLKRWNPGLAVWGMSATLGNLQEAMHSLLGHED---GV 260 Query: 237 LVRGQQRKRILIDTLLPPQPARFAWAGHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELW 296 LV+GQ K+++ID+LLP + RF W GHLGL MLP V+ EI +S++TLVFTNTRSQAE+W Sbjct: 261 LVQGQVPKKLVIDSLLPGRAERFPWGGHLGLTMLPQVIEEIAASSTTLVFTNTRSQAEIW 320 Query: 297 YQNLLEARPDWAGLIALHHGSLDREVREWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERV 356 YQ +LEARP+WAG IALHHGSLDR VREWVE GL+ G LKAVVCTSSLDLGVDF PVERV Sbjct: 321 YQAMLEARPEWAGTIALHHGSLDRAVREWVELGLKSGELKAVVCTSSLDLGVDFLPVERV 380 Query: 357 LQIGSPRGVARLLGGAGRSGHAPGRVSRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVP 416 LQIGSP+GVARLL AGRSGHAPGR SR TLVPT+S+E+VE AAA+ A+A G +E R P Sbjct: 381 LQIGSPKGVARLLQRAGRSGHAPGRPSRITLVPTHSIEMVEGAAARTAIAEGHIEARHSP 440 Query: 417 EAPLDVLVQHLVTIALGGGFRPDELFDEVRRAWSYRALREDQWQWALDFVVRGGQSLTAY 476 + PLDVLVQHLVT+ALGGGF PD+L+DEVR +Y +L + WQW LDFV +GG SL AY Sbjct: 441 DQPLDVLVQHLVTVALGGGFVPDDLYDEVRGTAAYASLSRESWQWCLDFVSQGGPSLAAY 500 Query: 477 PEYQRVQADAEGIYRVPQPAIATRHRLNIGTIVADASLHVQYLKGGRIGTIEEGFIARLR 536 P+Y+RV DAEG++RVP +A RHR+NIGTIV+DAS+ VQYL G +IG++EEGF+AR++ Sbjct: 501 PDYKRVVPDAEGVWRVPDARLARRHRMNIGTIVSDASMAVQYLGGAKIGSVEEGFVARMK 560 Query: 537 PGDRFLFGGRVLEFVRVHEMTAWVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAA 596 PGD FLFGGR+LE VR+H+MTAWVRR++ AVPRW GGRMPLS+TLA AV+ +L +A Sbjct: 561 PGDCFLFGGRLLELVRIHDMTAWVRRATGKRAAVPRWNGGRMPLSNTLADAVVQQLARAG 620 Query: 597 QARFDGPEMQAVEPLLALQHAWSALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLAS 656 +A +D PE+Q V PLL +Q WSALPT Q L+ E LK+REG HLF YPFAGR VH+GLAS Sbjct: 621 EAHYDSPELQCVRPLLEIQQQWSALPTPQTLLAETLKTREGSHLFLYPFAGRHVHLGLAS 680 Query: 657 LLAWRLARQQAASFSIAVNDYGFELLGAQQAPLEQLAAHQAQTLFSDHD------LLQDV 710 LLAWR+A+ +A +FSIAVNDYGFELL A + L + D D LL +V Sbjct: 681 LLAWRVAQHEARTFSIAVNDYGFELLSATEVDWPALLPQVLRLPEGDGDTDAHTALLHEV 740 Query: 711 LSSLNATELSQRRFREIARIAGLVSQGYPGQHKSARQLQASSALFFEVFRKHDANNLLLT 770 L+SLNA EL+QRRFREIAR++GL+ QGYPG+ +S+RQLQASS+LF+EVFRK+D +N LL Sbjct: 741 LASLNAGELAQRRFREIARVSGLIFQGYPGEKRSSRQLQASSSLFWEVFRKYDPSNKLLL 800 Query: 771 QAQREVLEQELELERLRSTLAELRARTLTLVRLQRPTPFALPLMVERFREKLSTEKLADR 830 QA++E+L QELE+ RLR++L + + L L L+RPTPF+ PLMVE FREKLS E +ADR Sbjct: 801 QAEKELLSQELEIGRLRASLERMATQQLVLKPLERPTPFSFPLMVELFREKLSNENVADR 860 Query: 831 VARMLRELESAA 842 +ARM+ +LE AA Sbjct: 861 IARMVEQLEKAA 872 >ref|ZP_07674333.1| helicase domain protein [Ralstonia sp. 5_7_47FAA] gb|EFP67449.1| helicase domain protein [Ralstonia sp. 5_7_47FAA] Length = 871 Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/836 (63%), Positives = 633/836 (75%), Gaps = 9/836 (1%) Query: 23 QSALTAAEAWFQRRGWQVFDFQREVWQAAQQGRSGLLHASTGSGKTYAVWFGALLHAQPS 82 + AL + WF RGW FQR VW A +G SGLLHA+TG+GKTYAVW GAL Sbjct: 3 EPALPDLDTWFDARGWTPMPFQRTVWSAMARGESGLLHATTGAGKTYAVWLGALQR---- 58 Query: 83 LGQPTQGATTNGLRVLWITPMRALAADTLRALQEPLPELLPHWQAGMRTGDTGSSERARQ 142 L Q + L VLW+TPMRALAADT RAL E +L PHW G+RTGDTGS+ERA Q Sbjct: 59 LAQVRSRSGAPPLSVLWLTPMRALAADTTRALTEAAQDLAPHWTLGLRTGDTGSAERAAQ 118 Query: 143 MKALPQALVTTPESLSLLLSQADARQRFGKLDAVIVDEWHELMGNKRGVQVQLALARLRR 202 + LP ALVTTPESLSLLL++ADAR+ G + V+VDEWHEL+GNKRGVQVQLALARLR Sbjct: 119 SRRLPTALVTTPESLSLLLARADAREALGSVRVVVVDEWHELVGNKRGVQVQLALARLRT 178 Query: 203 WRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRGQQRKRILIDTLLPPQPARFAWA 262 W P+++VWGLSATLGNL +++ AL G LV+G KR+ IDTLLP RF WA Sbjct: 179 WSPELIVWGLSATLGNLSEAMDALGDAATPTPGTLVQGHLPKRMEIDTLLPDGVGRFPWA 238 Query: 263 GHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNLLEARPDWAGLIALHHGSLDREV 322 GHLG+ MLP V+ E++S+++ LVF NTRSQAELWYQ ++ ARP+WAGLIALHHGSLDR Sbjct: 239 GHLGMAMLPHVLEELESASTALVFLNTRSQAELWYQAVINARPEWAGLIALHHGSLDRAT 298 Query: 323 REWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIGSPRGVARLLGGAGRSGHAPGRV 382 R+WVE GL+ G+LKAV CTSSLDLGVDF PVERVLQIGSP+GVARLL AGRSGHAPGR Sbjct: 299 RDWVETGLKQGKLKAVFCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRP 358 Query: 383 SRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPLDVLVQHLVTIALGGGFRPDELF 442 SR T+VPT+SLELVE AAA+ A +GQVE R P PLDVLVQHLVT+ALGGGF PD L Sbjct: 359 SRVTVVPTHSLELVEGAAARAAAMSGQVEARTSPHKPLDVLVQHLVTVALGGGFVPDALL 418 Query: 443 DEVRRAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQRVQADAEGIYRVPQPAIATRHR 502 EVRRAW+YR L +D+WQWALDFV +GG SLTAYP+Y+RV D GI+RVP +A RHR Sbjct: 419 QEVRRAWAYRDLHDDEWQWALDFVRQGGHSLTAYPDYRRVMPDEHGIWRVPDARLARRHR 478 Query: 503 LNIGTIVADASLHVQYLK---GGRIGTIEEGFIARLRPGDRFLFGGRVLEFVRVHEMTAW 559 ++IGTIV+DA++ V++ GG +G+IEEGFIARLRPGD FLF GR+LE VRV +MTA+ Sbjct: 479 MSIGTIVSDATMTVRWWHASGGGALGSIEEGFIARLRPGDNFLFAGRLLELVRVQDMTAY 538 Query: 560 VRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARFDGPEMQAVEPLLALQHAWS 619 VRR++ AVPRW GGRMPLS+ L+HAV+ +L+ AA ARFD PEMQA PLL LQ WS Sbjct: 539 VRRATGKRAAVPRWNGGRMPLSNELSHAVVAQLDAAAHARFDSPEMQAARPLLELQARWS 598 Query: 620 ALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAWRLARQQAASFSIAVNDYGF 679 ALPT LV E L SREG HLF YPFAGR H+GLASLL WR A + A+FS+A NDYG Sbjct: 599 ALPTTATLVAETLHSREGWHLFLYPFAGRHAHLGLASLLGWRAANRTPATFSLAFNDYGL 658 Query: 680 ELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELSQRRFREIARIAGLVSQGYP 739 ELL A P++ A + LF+ H L+ DVL+SLNA EL+QRRFREIAR++GLV QGYP Sbjct: 659 ELLSA--TPIDWPALLASGELFATHTLMPDVLASLNAGELAQRRFREIARVSGLVFQGYP 716 Query: 740 GQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQELELERLRSTLAELRARTLT 799 G HKSARQLQASS LF+EVFR+HD NLLL+QA+ EVL QEL+L+R+ + L +R L Sbjct: 717 GAHKSARQLQASSGLFYEVFRRHDPGNLLLSQAETEVLRQELDLDRIEAALVRMRGLQLQ 776 Query: 800 LVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELESAADASAGKTAARRRP 855 L L+RP+PF+ PLMVERFRE+LSTEKLADR+ARML E E AA A RP Sbjct: 777 LCALKRPSPFSFPLMVERFREQLSTEKLADRIARMLAEAERAAGPEPTDPDAAARP 832 >ref|YP_004474141.1| DEAD/DEAH box helicase [Pseudomonas fulva 12-X] gb|AEF22047.1| DEAD/H associated domain protein [Pseudomonas fulva 12-X] Length = 859 Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 547/826 (66%), Positives = 650/826 (78%), Gaps = 15/826 (1%) Query: 26 LTAAEAWFQRRGWQVFDFQREVWQAAQQGRSGLLHASTGSGKTYAVWFGALL----HAQP 81 ++ A W QR GW+ FDFQ+EVWQA G+SGLLHASTG+GKTYAVW AL A P Sbjct: 1 MSLASTWLQRNGWKAFDFQKEVWQAVADGQSGLLHASTGAGKTYAVWLAALNRFAGKASP 60 Query: 82 SLGQPTQGATTNG-LRVLWITPMRALAADTLRALQEPLPELLPHWQAGMRTGDTGSSERA 140 ++ A L VLWITPMRALAADT RALQ P+ L W GMRTGDTGS+ER Sbjct: 61 KKAPVSKRAPPAAPLTVLWITPMRALAADTQRALQAPVDGLELPWTVGMRTGDTGSAERQ 120 Query: 141 RQMKALPQALVTTPESLSLLLSQADARQRFGKLDAVIVDEWHELMGNKRGVQVQLALARL 200 RQ + LP ALVTTPESL+LLL+ ADA+ +F + ++VDEWHEL+GNKRGVQ+QLALARL Sbjct: 121 RQARRLPTALVTTPESLTLLLTGADAKNQFAHVGMLVVDEWHELLGNKRGVQLQLALARL 180 Query: 201 RRWRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRGQQRKRILIDTLLPPQPARFA 260 R+W PQ+VVWGLSATLGN +L+ LL PD G LVRG+Q + LIDTLLPP RF Sbjct: 181 RQWNPQLVVWGLSATLGNQPHALEVLL-PD--GNGRLVRGEQGGKPLIDTLLPPAVERFP 237 Query: 261 WAGHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNLLEARPDWAGLIALHHGSLDR 320 WAGHLGL++LP VV E+D S+ +LVFTNTRSQ+ELWYQ LLEARPDWAGLIALHHGSL R Sbjct: 238 WAGHLGLRLLPQVVEELDKSSVSLVFTNTRSQSELWYQALLEARPDWAGLIALHHGSLAR 297 Query: 321 EVREWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIGSPRGVARLLGGAGRSGHAPG 380 EVR+WVE GL+ G+LKAVVCTSSLDLGVDF PVERVLQIGS +GVARLL AGRSGHAPG Sbjct: 298 EVRDWVENGLKQGKLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLLQRAGRSGHAPG 357 Query: 381 RVSRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPLDVLVQHLVTIALGGGFRPDE 440 R SRATLVPT+++EL+EAAA QDAVAAG++E R P PLDVLVQHLV++ALGGGFRPDE Sbjct: 358 RTSRATLVPTHAVELLEAAALQDAVAAGRIEARESPHQPLDVLVQHLVSMALGGGFRPDE 417 Query: 441 LFDEVRRAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQRVQADAEGIYRVPQPAIATR 500 L E+R W+YR L E QW+WAL FV +GG+SL+AYP+YQRV+ DAEG++RVP P +A R Sbjct: 418 LLHEIRSTWAYRDLDEAQWRWALAFVRQGGESLSAYPDYQRVEPDAEGVWRVPSPRLARR 477 Query: 501 HRLNIGTIVADASLHVQY----LKGGRIGTIEEGFIARLRPGDRFLFGGRVLEFVRVHEM 556 HR+++GTIV+DASL V++ GG +G++EEGFIARLRPGD FLFGGR LE VRV M Sbjct: 478 HRMSVGTIVSDASLTVKWWSKGGGGGSLGSVEEGFIARLRPGDVFLFGGRPLELVRVENM 537 Query: 557 TAWVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARFDGPEMQAVEPLLALQH 616 TA+V+RS++G +VPRW GGRMPLS+TL+ A++ R +AAQ RF+GPEM+ ++PLL +Q Sbjct: 538 TAYVKRSAAGKASVPRWNGGRMPLSNTLSEALVARFGEAAQGRFEGPEMRLLQPLLEVQA 597 Query: 617 AWSALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAWRLARQQAASFSIAVND 676 WSALP+ L+ E L SREG HLF YPFAGR VH+GLASLLAWRL +++ SFSIAVND Sbjct: 598 NWSALPSPGTLLAETLHSREGWHLFLYPFAGRNVHLGLASLLAWRLGQRRPLSFSIAVND 657 Query: 677 YGFELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELSQRRFREIARIAGLVSQ 736 YG ELL A + QL + LF + DLL DVL+SLNA EL+QRRFREIARIAGLV Sbjct: 658 YGLELLCASEVEWGQLLDGE---LFDERDLLHDVLASLNAGELAQRRFREIARIAGLVFG 714 Query: 737 GYPGQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQELELERLRSTLAELRAR 796 GYPG KS RQ+QASS LFF+VFR++D NLLLTQA EVL QEL+++ LR TLA++RA Sbjct: 715 GYPGAGKSLRQVQASSGLFFDVFRQYDPGNLLLTQAHDEVLSQELDVQLLRHTLADMRAA 774 Query: 797 TLTLVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELESAA 842 L L L+R TP A PLMVERFRE+LS+EKLADR+ARML ELE AA Sbjct: 775 RLNLHALRRATPLAFPLMVERFRERLSSEKLADRIARMLGELERAA 820 >ref|YP_001173155.1| DEAD-box ATP dependent DNA helicase [Pseudomonas stutzeri A1501] gb|ABP80313.1| ATP-dependent helicase, DEAD box family [Pseudomonas stutzeri A1501] Length = 898 Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/822 (65%), Positives = 639/822 (77%), Gaps = 10/822 (1%) Query: 25 ALTAAEAWFQRRGWQVFDFQREVWQAAQQGRSGLLHASTGSGKTYAVWFGALLHAQPSLG 84 A + A WF R WQ F FQ+EVWQA G SGLLHA+TGSGKTYAVW GAL Sbjct: 42 AESLAAGWFASRAWQPFPFQQEVWQAIGDGESGLLHATTGSGKTYAVWLGALNRFATKAP 101 Query: 85 QPTQGATTNGLRVLWITPMRALAADTLRALQEPLPELLPHWQAGMRTGDTGSSERARQMK 144 PT L VLWITPMRALAADT RALQ PL +L W G+RTGDT +ERARQ + Sbjct: 102 SPTATDKPAPLTVLWITPMRALAADTARALQAPLDDLGIGWSIGLRTGDTSGAERARQGR 161 Query: 145 ALPQALVTTPESLSLLLSQADARQRFGKLDAVIVDEWHELMGNKRGVQVQLALARLRRWR 204 LP ALVTTPESL+LLL++ADARQ F L ++VDEWHEL+GNKRGVQ+QLALARLR+W Sbjct: 162 RLPSALVTTPESLTLLLTRADARQAFAGLRMLVVDEWHELLGNKRGVQLQLALARLRQWM 221 Query: 205 PQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRGQQRKRILIDTLLPPQPARFAWAGH 264 P+++VWGLSATLGN +L LL P G LV+G+ K + +DTLLPP RF WAGH Sbjct: 222 PELIVWGLSATLGNQPHALDVLLHP---GSGRLVQGKVDKDLRVDTLLPPSIERFPWAGH 278 Query: 265 LGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNLLEARPDWAGLIALHHGSLDREVRE 324 LGL+MLP VV EIDS+ +TLVFTNTRSQ+E+WYQ LL+ARPDWAGLIALHHGSL REVR+ Sbjct: 279 LGLRMLPQVVEEIDSAATTLVFTNTRSQSEIWYQALLDARPDWAGLIALHHGSLAREVRD 338 Query: 325 WVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIGSPRGVARLLGGAGRSGHAPGRVSR 384 WVE GL+ G LKAVVCTSSLDLGVDF PVERVLQIGSP+GVARL+ AGRSGHAPGR SR Sbjct: 339 WVELGLKQGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRTSR 398 Query: 385 ATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPLDVLVQHLVTIALGGGFRPDELFDE 444 TLVPT+S+E+VEAAAAQ A+A ++E R P PLDVLVQHLV++ALGGGFRPDEL+ E Sbjct: 399 VTLVPTHSVEVVEAAAAQVAIAERRIEARSAPHRPLDVLVQHLVSMALGGGFRPDELYAE 458 Query: 445 VRRAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQRVQADAEGIYRVPQPAIATRHRLN 504 VR+AWSYR L ++ WQWAL FV GG SLTAYP+YQRV+ D G+++VP +A RHR++ Sbjct: 459 VRQAWSYRELTDEHWQWALAFVRHGGHSLTAYPDYQRVEPDETGLWKVPSRRVALRHRMS 518 Query: 505 IGTIVADASLHVQYL-KGG---RIGTIEEGFIARLRPGDRFLFGGRVLEFVRVHEMTAWV 560 IGTIV+DASL V++ KGG +G++EEGFIARLRPGD FLFGGR+LE VRV MTA+V Sbjct: 519 IGTIVSDASLTVKFWAKGGSGRSLGSVEEGFIARLRPGDNFLFGGRLLELVRVENMTAYV 578 Query: 561 RRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARFDGPEMQAVEPLLALQHAWSA 620 R++ AVPRW GGRMPLSS LA AV+++L A++ +F PEM+ VEPLL +Q WSA Sbjct: 579 SRATGKKAAVPRWNGGRMPLSSELADAVVEQLGAASREQFTTPEMRLVEPLLRVQMDWSA 638 Query: 621 LPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAWRLARQQAASFSIAVNDYGFE 680 LPT L+ E +KSREG HLF YPFAGR VH+GLASLLAWR+ ++Q +FSIAVNDYGFE Sbjct: 639 LPTKTTLLAEVMKSREGWHLFLYPFAGRHVHLGLASLLAWRMGQRQPLTFSIAVNDYGFE 698 Query: 681 LLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELSQRRFREIARIAGLVSQGYPG 740 LL A + + LFS++DLL DVL+SLNA+EL++RRFREIARIAGLV GYPG Sbjct: 699 LLSATEVDWLHWLTPE---LFSENDLLHDVLASLNASELARRRFREIARIAGLVFSGYPG 755 Query: 741 QHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQELELERLRSTLAELRARTLTL 800 KSARQLQASS LFF+VFR++D NLLLTQA+ EVL QELE+ERL+ TL L+ R L + Sbjct: 756 AQKSARQLQASSGLFFDVFRQYDPGNLLLTQAEEEVLRQELEVERLQHTLQRLQQRRLDV 815 Query: 801 VRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELESAA 842 +++R TP A PLMVERFRE +++EKLADR+ RM+ EL+ AA Sbjct: 816 HQVRRATPLAFPLMVERFRESMTSEKLADRIRRMVAELDKAA 857 >gb|EGH66807.1| helicase domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 830 Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/824 (64%), Positives = 645/824 (78%), Gaps = 17/824 (2%) Query: 29 AEAWFQRRGWQVFDFQREVWQAAQQGRSGLLHASTGSGKTYAVWFGAL-----LHAQPSL 83 A WF RGW+ F FQ+EVW+A + G+SGLLHASTGSGKTYAVWF AL +A + Sbjct: 8 ARRWFLARGWKPFAFQKEVWEAVKNGKSGLLHASTGSGKTYAVWFAALNRFANANALTAD 67 Query: 84 GQPTQGATTNG-LRVLWITPMRALAADTLRALQEPLPELLPHWQAGMRTGDTGSSERARQ 142 +P + L VLWITPMRALAADT RAL+ PL EL W G+RTGDT SERARQ Sbjct: 68 DKPRKRKPPAAPLSVLWITPMRALAADTARALEAPLAELDIAWSVGLRTGDTSGSERARQ 127 Query: 143 MKALPQALVTTPESLSLLLSQADARQRFGKLDAVIVDEWHELMGNKRGVQVQLALARLRR 202 + LP AL+TTPESL+LLL++ADA+ L V+VDEWHEL+GNKRGVQ+QLALARLRR Sbjct: 128 SRRLPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQLALARLRR 187 Query: 203 WRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRGQQRKRILIDTLLPPQPARFAWA 262 W PQ++VWG+SATLGN E + Q L+G GV V+G+ K++L+DTLLPP RF WA Sbjct: 188 WNPQLIVWGISATLGNQEHAEQVLIGDG----GVTVQGKTAKQLLVDTLLPPSIERFPWA 243 Query: 263 GHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNLLEARPDWAGLIALHHGSLDREV 322 GH+GL+MLP VVAE+DSS S LVFTNTR+Q+E+WYQ LLEARPDWAGLIALHHGSL REV Sbjct: 244 GHMGLRMLPQVVAEVDSSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLAREV 303 Query: 323 REWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIGSPRGVARLLGGAGRSGHAPGRV 382 R+WVE+ L+DG LKAVVCTSSLDLGVDF PVERVLQIGSP+GVARL+ AGRSGHAPGR Sbjct: 304 RDWVERALKDGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRP 363 Query: 383 SRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPLDVLVQHLVTIALGGGFRPDELF 442 SR TLVPT+SLELVEAAAA DAVAA +E R P PLDVLVQHLV++ALGGGF PDEL Sbjct: 364 SRVTLVPTHSLELVEAAAAHDAVAARMIEPRESPHQPLDVLVQHLVSMALGGGFLPDELL 423 Query: 443 DEVRRAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQRVQADAEGIYRVPQPAIATRHR 502 EVR AW+YR L ++QW WAL FV GG SLTAYP+Y+R + D +G++RVP +A RHR Sbjct: 424 VEVRSAWAYRDLSDEQWHWALAFVRNGGHSLTAYPDYRRAEPDEDGVWRVPDARLARRHR 483 Query: 503 LNIGTIVADASLHVQYLKG----GRIGTIEEGFIARLRPGDRFLFGGRVLEFVRVHEMTA 558 +++GTIV++A+++++Y K G +G++EEGFIARL+PGD FLFGGR+LE VRV MTA Sbjct: 484 MSVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVENMTA 543 Query: 559 WVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARFDGPEMQAVEPLLALQHAW 618 +V+R++ AVPRW GGRMPLSS LA+AV+++ + AA+ F+ PEMQA++PLL +Q W Sbjct: 544 YVKRATGKKAAVPRWNGGRMPLSSELANAVVEKFDAAARGEFNSPEMQAIKPLLEVQQQW 603 Query: 619 SALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAWRLARQQAASFSIAVNDYG 678 S LP L+ E LKSREG HLF YPFAGR VH+GL SLLAWRL+R + +FSIAVNDYG Sbjct: 604 SGLPQRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRHRPLTFSIAVNDYG 663 Query: 679 FELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELSQRRFREIARIAGLVSQGY 738 ELL A + ++ + A Q LFS+ DLL D+++SLNA EL+ RRFREIARI+GLV GY Sbjct: 664 LELLSASE--IDWVQALQGD-LFSETDLLADIIASLNAGELALRRFREIARISGLVFSGY 720 Query: 739 PGQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQELELERLRSTLAELRARTL 798 PG KS RQLQASS LFFEVF+++DA N+LLTQA++EVL QEL+L+RL TL ++ +R L Sbjct: 721 PGAAKSNRQLQASSGLFFEVFKQYDAENMLLTQAEQEVLRQELDLQRLELTLRQINSRRL 780 Query: 799 TLVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELESAA 842 L ++R TP A PL+VERFRE LS+EKLADR+ARM+R+LE AA Sbjct: 781 DLHAIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAA 824 >ref|ZP_03399004.1| helicase domain protein [Pseudomonas syringae pv. tomato T1] gb|EEB57976.1| helicase domain protein [Pseudomonas syringae pv. tomato T1] Length = 830 Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/828 (63%), Positives = 638/828 (77%), Gaps = 25/828 (3%) Query: 29 AEAWFQRRGWQVFDFQREVWQAAQQGRSGLLHASTGSGKTYAVWFGAL----------LH 78 A WF RGW+ F FQ+EVW A + G SGLLHASTGSGKTYAVWF AL Sbjct: 8 ARRWFLARGWKPFAFQKEVWAAVKNGESGLLHASTGSGKTYAVWFAALNRFANANTLTAD 67 Query: 79 AQPSLGQPTQGATTNGLRVLWITPMRALAADTLRALQEPLPELLPHWQAGMRTGDTGSSE 138 +P +P L VLWITPMRALAADT RAL+ PL EL W G+RTGDT SE Sbjct: 68 DKPRKRKPPAAP----LSVLWITPMRALAADTARALEAPLAELDIAWSVGLRTGDTSGSE 123 Query: 139 RARQMKALPQALVTTPESLSLLLSQADARQRFGKLDAVIVDEWHELMGNKRGVQVQLALA 198 RARQ + LP AL+TTPESL+LLL++ADA+ L V+VDEWHEL+GNKRGVQ+QLALA Sbjct: 124 RARQSRRLPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQLALA 183 Query: 199 RLRRWRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRGQQRKRILIDTLLPPQPAR 258 RLR W PQ++VWG+SATLGN E + Q L+G GV V+G+ K++L+DTLLPP R Sbjct: 184 RLRHWNPQLIVWGISATLGNQEHAQQVLIGDG----GVTVQGKIVKQLLVDTLLPPAIER 239 Query: 259 FAWAGHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNLLEARPDWAGLIALHHGSL 318 F WAGH+GL+MLP VVAE+ SS S LVFTNTR+Q+E+WYQ LLEARPDWAGLIALHHGSL Sbjct: 240 FPWAGHMGLRMLPQVVAEVHSSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSL 299 Query: 319 DREVREWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIGSPRGVARLLGGAGRSGHA 378 REVR+WVE+ L++G LKAVVCTSSLDLGVDF PVERVLQIGSP+GVARL+ AGRSGHA Sbjct: 300 AREVRDWVERALKEGVLKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHA 359 Query: 379 PGRVSRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPLDVLVQHLVTIALGGGFRP 438 PGR SR TLVPT+SLELVEAAAA DAVAA +E R P PLDVLVQHLV++ALGGGF P Sbjct: 360 PGRPSRVTLVPTHSLELVEAAAAHDAVAARMIEPRESPHQPLDVLVQHLVSMALGGGFLP 419 Query: 439 DELFDEVRRAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQRVQADAEGIYRVPQPAIA 498 D+L EVR AW+YR L +DQWQWAL FV GG SLTAYP+Y+R + D G++RVP +A Sbjct: 420 DDLLVEVRSAWAYRDLSDDQWQWALAFVRNGGHSLTAYPDYRRAEPDEHGVWRVPDARLA 479 Query: 499 TRHRLNIGTIVADASLHVQYLKG----GRIGTIEEGFIARLRPGDRFLFGGRVLEFVRVH 554 RHR+++GTIV++A+++++Y K G +G++EEGFIARL+PGD FLFGGR+LE VRV Sbjct: 480 RRHRMSVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVE 539 Query: 555 EMTAWVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARFDGPEMQAVEPLLAL 614 MTA+V+R++ AVPRW GGRMPLSS LA+AV+++ + AA+ F+ PEMQA++PLL + Sbjct: 540 NMTAYVKRATGKKAAVPRWNGGRMPLSSELANAVVEKFDAAARGEFNSPEMQAIKPLLEV 599 Query: 615 QHAWSALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAWRLARQQAASFSIAV 674 Q WS LP L+ E LKSREG HLF YPFAGR VH+GL SLLAWRL+R Q +FSIAV Sbjct: 600 QQQWSGLPQRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRYQPLTFSIAV 659 Query: 675 NDYGFELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELSQRRFREIARIAGLV 734 NDYG ELL A + Q A Q LFS+ DLL D+++SLNA EL+ RRFREIARI+GLV Sbjct: 660 NDYGLELLSASEIDWAQ--ALQGD-LFSETDLLADIIASLNAGELALRRFREIARISGLV 716 Query: 735 SQGYPGQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQELELERLRSTLAELR 794 GYPG KS RQLQASS LFFEVF+++DA N+LLTQA++EVL QEL+L+RL TL ++ Sbjct: 717 FSGYPGAAKSNRQLQASSGLFFEVFKQYDAENMLLTQAEQEVLRQELDLQRLELTLRQIN 776 Query: 795 ARTLTLVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELESAA 842 +RTL L ++R TP A PL+VERFRE LS+EKLADR+ARM+R+LE AA Sbjct: 777 SRTLDLHAIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAA 824 >ref|YP_273640.1| helicase domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gb|AAZ36775.1| helicase domain protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 830 Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/824 (63%), Positives = 641/824 (77%), Gaps = 17/824 (2%) Query: 29 AEAWFQRRGWQVFDFQREVWQAAQQGRSGLLHASTGSGKTYAVWFGAL-----LHAQPSL 83 A WF RGW+ F FQ+EVW A + G SGLLHASTGSGKTYAVWF AL + + Sbjct: 8 ARRWFLARGWKPFAFQKEVWAAVKMGESGLLHASTGSGKTYAVWFAALNRFAKANTLTAD 67 Query: 84 GQP-TQGATTNGLRVLWITPMRALAADTLRALQEPLPELLPHWQAGMRTGDTGSSERARQ 142 +P + L +LWITPMRALAADT RAL+ PL EL W G+RTGDT SERARQ Sbjct: 68 NKPRKRKPPAEPLSILWITPMRALAADTARALEAPLAELDIPWSVGLRTGDTSGSERARQ 127 Query: 143 MKALPQALVTTPESLSLLLSQADARQRFGKLDAVIVDEWHELMGNKRGVQVQLALARLRR 202 + LP AL+TTPESL+LLL++ADA+ L V+VDEWHEL+GNKRGVQ+QLALARLRR Sbjct: 128 SRRLPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQLALARLRR 187 Query: 203 WRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRGQQRKRILIDTLLPPQPARFAWA 262 W PQ++VWG+SATLGN + +LQ L+G GV V+G+ K + +DTLLPP RF WA Sbjct: 188 WNPQLIVWGISATLGNQQHALQVLIGDG----GVTVQGKIVKNLQVDTLLPPSIERFPWA 243 Query: 263 GHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNLLEARPDWAGLIALHHGSLDREV 322 GH+GL+MLP VVAE+DSS S LVFTNTR+Q+E+WYQ LLEARPDWAGLIALHHGSL REV Sbjct: 244 GHMGLRMLPQVVAEVDSSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLAREV 303 Query: 323 REWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIGSPRGVARLLGGAGRSGHAPGRV 382 R+WVE+ L++G LKAVVCTSSLDLGVDF PVERVLQIGSP+GVARL+ AGRSGHAPGR Sbjct: 304 RDWVERALKEGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRP 363 Query: 383 SRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPLDVLVQHLVTIALGGGFRPDELF 442 SR TLVPT+SLELVEAAAA DAVAA +E R P+ PLDVLVQHLV+IALGGGF PDEL Sbjct: 364 SRVTLVPTHSLELVEAAAAHDAVAARLIEPRESPQQPLDVLVQHLVSIALGGGFLPDELL 423 Query: 443 DEVRRAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQRVQADAEGIYRVPQPAIATRHR 502 EVR AW+YR L ++QWQWAL FV GG SLTAYP+Y+R + D +G++RVP +A RHR Sbjct: 424 TEVRSAWAYRDLSDEQWQWALAFVRNGGHSLTAYPDYRRAEPDEQGVWRVPDARLARRHR 483 Query: 503 LNIGTIVADASLHVQYLKG----GRIGTIEEGFIARLRPGDRFLFGGRVLEFVRVHEMTA 558 +++GTIV++A+++++Y K G +G++EEGFIARL+PGD FLFGGR+LE VRV MTA Sbjct: 484 MSVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVENMTA 543 Query: 559 WVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARFDGPEMQAVEPLLALQHAW 618 +V+R++ AVPRW GGRMPLSS LA AV+++ + AA+ F PEMQA++PLL +Q W Sbjct: 544 YVKRATGKKAAVPRWNGGRMPLSSELADAVVEKFDAAARGEFTSPEMQAIKPLLEVQQQW 603 Query: 619 SALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAWRLARQQAASFSIAVNDYG 678 S LP L+ E LKSREG HLF YPFAGR VH+GL SLLAWRL+R + +FSIAVNDYG Sbjct: 604 SGLPQRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRHRPLTFSIAVNDYG 663 Query: 679 FELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELSQRRFREIARIAGLVSQGY 738 ELL A + Q A +A LFS+ DLL D+++SLNA EL+ RRFREIARI+GLV GY Sbjct: 664 LELLSASEIDWAQ--ALRAD-LFSETDLLADIIASLNAGELALRRFREIARISGLVFSGY 720 Query: 739 PGQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQELELERLRSTLAELRARTL 798 PG KS RQLQASS LFFEVF+++DA+N+LLTQA++EVL QEL+L+RL TL ++ +R L Sbjct: 721 PGAAKSNRQLQASSGLFFEVFKQYDADNMLLTQAEQEVLRQELDLQRLELTLRQINSRRL 780 Query: 799 TLVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELESAA 842 L ++R TP A PL+VERFRE LS+EKLADR+ARM+R+LE AA Sbjct: 781 DLHAIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAA 824 >ref|ZP_07261378.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Pseudomonas syringae pv. syringae 642] Length = 830 Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/824 (64%), Positives = 638/824 (77%), Gaps = 17/824 (2%) Query: 29 AEAWFQRRGWQVFDFQREVWQAAQQGRSGLLHASTGSGKTYAVWFGAL-----LHAQPSL 83 A WF RGW+ F FQ+EVW A + G SGLLHASTGSGKTYAVWF AL + + Sbjct: 8 ARRWFLARGWKPFAFQKEVWAAVKNGESGLLHASTGSGKTYAVWFAALNRFARANTLTAD 67 Query: 84 GQP-TQGATTNGLRVLWITPMRALAADTLRALQEPLPELLPHWQAGMRTGDTGSSERARQ 142 +P + L VLWITPMRALAADT RAL+ PL EL W G+RTGDT SERARQ Sbjct: 68 NKPRKRKPPAEPLSVLWITPMRALAADTARALEAPLTELDIPWSVGLRTGDTSGSERARQ 127 Query: 143 MKALPQALVTTPESLSLLLSQADARQRFGKLDAVIVDEWHELMGNKRGVQVQLALARLRR 202 + LP AL+TTPESL+LLL++ADA+ L V+VDEWHEL+GNKRGVQ+QLALARLRR Sbjct: 128 SRRLPSALITTPESLTLLLTRADAQVALSTLKMVVVDEWHELIGNKRGVQLQLALARLRR 187 Query: 203 WRPQMVVWGLSATLGNLEQSLQALLGPDQAAQGVLVRGQQRKRILIDTLLPPQPARFAWA 262 W PQ++VWG+SATLGN + + Q L+G GV V+G+ K + +DTLLP RF WA Sbjct: 188 WNPQLIVWGISATLGNQQHAQQVLIGDG----GVTVQGKIVKDLQVDTLLPSSIERFPWA 243 Query: 263 GHLGLQMLPGVVAEIDSSNSTLVFTNTRSQAELWYQNLLEARPDWAGLIALHHGSLDREV 322 GH+GL+MLP VVAE+DSS S LVFTNTR+Q+E+WYQ LLEARPDWAGLIALHHGSL REV Sbjct: 244 GHMGLRMLPQVVAEVDSSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLAREV 303 Query: 323 REWVEQGLRDGRLKAVVCTSSLDLGVDFTPVERVLQIGSPRGVARLLGGAGRSGHAPGRV 382 R+WVE+ L++G LKAVVCTSSLDLGVDF PVERVLQIGSP+GVARL+ AGRSGHAPGR Sbjct: 304 RDWVERALKEGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRP 363 Query: 383 SRATLVPTNSLELVEAAAAQDAVAAGQVEQRPVPEAPLDVLVQHLVTIALGGGFRPDELF 442 SR TLVPT+SLELVEAAAA DAV A +E R P PLDVLVQHLV+IALGGGF PDEL Sbjct: 364 SRVTLVPTHSLELVEAAAAHDAVEARMIEPRESPHQPLDVLVQHLVSIALGGGFLPDELL 423 Query: 443 DEVRRAWSYRALREDQWQWALDFVVRGGQSLTAYPEYQRVQADAEGIYRVPQPAIATRHR 502 EVR AW+YR L ++QWQWAL FV GG SLTAYP+Y+R + D EGI+RVP +A RHR Sbjct: 424 AEVRSAWAYRDLSDEQWQWALAFVRNGGHSLTAYPDYRRAEPDEEGIWRVPDARLARRHR 483 Query: 503 LNIGTIVADASLHVQYLKG----GRIGTIEEGFIARLRPGDRFLFGGRVLEFVRVHEMTA 558 +++GTIV++A+++++Y K G +G++EEGFIARL+PGD FLFGGR+LE VRV MTA Sbjct: 484 MSVGTIVSEATVNLKYWKKGGGGGSLGSVEEGFIARLKPGDGFLFGGRLLELVRVENMTA 543 Query: 559 WVRRSSSGSGAVPRWQGGRMPLSSTLAHAVLDRLEQAAQARFDGPEMQAVEPLLALQHAW 618 +V+R++ AVPRW GGRMPLSS LA AV+++ + AA+ FD PEM+A++PLL +Q W Sbjct: 544 YVKRATGKKAAVPRWNGGRMPLSSELADAVVEKFDAAARGEFDSPEMRAIKPLLEVQRQW 603 Query: 619 SALPTGQRLVVEALKSREGHHLFFYPFAGRLVHMGLASLLAWRLARQQAASFSIAVNDYG 678 S LP L+ E LKSREG HLF YPFAGR VH+GL SLLAWRL+R + +FSIAVNDYG Sbjct: 604 SGLPRRDTLLAETLKSREGWHLFLYPFAGRHVHLGLGSLLAWRLSRHRPLTFSIAVNDYG 663 Query: 679 FELLGAQQAPLEQLAAHQAQTLFSDHDLLQDVLSSLNATELSQRRFREIARIAGLVSQGY 738 ELL A + Q QA LFS+ DLL D+++SLNA EL+ RRFREIARI+GLV GY Sbjct: 664 LELLSASEIDWTQ--TLQAD-LFSETDLLADIIASLNAGELALRRFREIARISGLVFSGY 720 Query: 739 PGQHKSARQLQASSALFFEVFRKHDANNLLLTQAQREVLEQELELERLRSTLAELRARTL 798 PG KS RQLQASS LFFEVF+++DA+N+LLTQA++EVL QEL+L+RL TL ++ +RTL Sbjct: 721 PGAAKSNRQLQASSGLFFEVFKQYDADNMLLTQAEQEVLRQELDLQRLELTLRQINSRTL 780 Query: 799 TLVRLQRPTPFALPLMVERFREKLSTEKLADRVARMLRELESAA 842 L ++R TP A PL+VERFRE LS+EKLADR+ARM+R+LE AA Sbjct: 781 DLHAIKRATPLAFPLLVERFRESLSSEKLADRIARMVRDLEKAA 824