BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0292.p (220 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774263.1| DedA DSG-1 transmembrane protein [Herbaspiri... 439 e-121 ref|YP_004754217.1| DedA protein [Collimonas fungivorans Ter331]... 324 5e-87 ref|YP_002006535.1| hypothetical protein RALTA_A2543 [Cupriavidu... 300 1e-79 ref|YP_296973.1| hypothetical protein Reut_A2768 [Ralstonia eutr... 293 1e-77 ref|YP_001098756.1| DedA family protein [Herminiimonas arsenicox... 293 1e-77 emb|CCA79691.1| putative integral membrane protein DedA (dedA) [... 291 4e-77 ref|YP_003751567.1| hypothetical protein RPSI07_0908 [Ralstonia ... 291 5e-77 emb|CBJ37008.1| putative integral membrane protein DedA (dedA) [... 288 3e-76 ref|YP_003744780.1| integral membrane protein deda (deda) [Ralst... 288 4e-76 ref|ZP_07676131.1| DedA family protein [Ralstonia sp. 5_7_47FAA]... 287 1e-75 >ref|YP_003774263.1| DedA DSG-1 transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62355.1| DedA DSG-1 transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 220 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 220/220 (100%), Positives = 220/220 (100%) Query: 1 MDYLQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 60 MDYLQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF Sbjct: 1 MDYLQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 60 Query: 61 CATGAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKH 120 CATGAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKH Sbjct: 61 CATGAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKH 120 Query: 121 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVV 180 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVV Sbjct: 121 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVV 180 Query: 181 QQNLNTLVLIGIVAAVFPIVLGGLWQIWRKLRGKRKVSNA 220 QQNLNTLVLIGIVAAVFPIVLGGLWQIWRKLRGKRKVSNA Sbjct: 181 QQNLNTLVLIGIVAAVFPIVLGGLWQIWRKLRGKRKVSNA 220 >ref|YP_004754217.1| DedA protein [Collimonas fungivorans Ter331] gb|AEK63394.1| DedA protein [Collimonas fungivorans Ter331] Length = 215 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 147/213 (69%), Positives = 183/213 (85%) Query: 1 MDYLQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 60 MD++Q +D+++HVDK LG LI++YGALIY VLFLIVFCETGLVVLPFLPGD+LLFI G F Sbjct: 1 MDFMQFVDIILHVDKSLGFLIKEYGALIYIVLFLIVFCETGLVVLPFLPGDTLLFIGGAF 60 Query: 61 CATGAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKH 120 CA G M+IW LM LL+VAA GNTLNYWIG +G +VYTH+YRWL+ +AL+KTHAFYE H Sbjct: 61 CANGEMNIWALMGLLIVAATTGNTLNYWIGSLIGHKVYTHDYRWLDKKALQKTHAFYEHH 120 Query: 121 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVV 180 GGKTI+++RF PIVRTFAPF+AGVS M+F++FQ FN+ GA +WVVGLV GY FGNIPV+ Sbjct: 121 GGKTIILSRFVPIVRTFAPFVAGVSEMTFSKFQFFNITGALIWVVGLVSAGYFFGNIPVI 180 Query: 181 QQNLNTLVLIGIVAAVFPIVLGGLWQIWRKLRG 213 + +LNT+VLIG+ AAV P+ LGGLW+ ++K+RG Sbjct: 181 RDHLNTIVLIGVGAAVVPVALGGLWKFYKKMRG 213 >ref|YP_002006535.1| hypothetical protein RALTA_A2543 [Cupriavidus taiwanensis LMG 19424] emb|CAQ70474.1| conserved hypothetical protein, dedA family; putative integral membrane protein [Cupriavidus taiwanensis LMG 19424] Length = 221 Score = 300 bits (767), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 145/213 (68%), Positives = 181/213 (84%), Gaps = 3/213 (1%) Query: 4 LQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCAT 63 LQL+D+LVHVDKYLG +I+QYG +YA+LFLIVF ETGLVVLPFLPGDSLLFIAG FCAT Sbjct: 5 LQLIDMLVHVDKYLGTVIDQYGHWVYAILFLIVFAETGLVVLPFLPGDSLLFIAGAFCAT 64 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKHGGK 123 GAM+ W L+ LL+VAA++GNT+NY +G W+G +V+ H +R+L+ +ALR+TH FYE+HGGK Sbjct: 65 GAMNEWGLIGLLLVAAISGNTVNYMVGNWIGPKVFDHQWRFLDQDALRRTHDFYERHGGK 124 Query: 124 TIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQN 183 T+V+ARF PIVRTFAPF+AGVS M+FARFQ+FNV+GA WVVGLV GY FGN+P V+Q Sbjct: 125 TLVMARFVPIVRTFAPFVAGVSQMTFARFQMFNVIGALAWVVGLVFAGYFFGNLPFVKQY 184 Query: 184 LNTLVLIGIVAAVFPIVLGGLWQIWRKLRGKRK 216 LN +VL GI AAV P+VLGGLW++ +RG R+ Sbjct: 185 LNLIVLAGIGAAVVPLVLGGLWKL---VRGNRR 214 >ref|YP_296973.1| hypothetical protein Reut_A2768 [Ralstonia eutropha JMP134] gb|AAZ62129.1| DedA [Ralstonia eutropha JMP134] Length = 212 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 139/212 (65%), Positives = 177/212 (83%), Gaps = 3/212 (1%) Query: 9 VLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCATGAMDI 68 +L+HVDKYLG +I+QYGA +YA+LFLIVF ETGLVVLPFLPGDSLLFIAG FCATGAM+ Sbjct: 1 MLLHVDKYLGTVIQQYGAWVYAILFLIVFAETGLVVLPFLPGDSLLFIAGAFCATGAMNE 60 Query: 69 WLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKHGGKTIVIA 128 W+L+ LL+ AA++GNT+NYW+G W+G +V+ H +R+L+ +ALR+TH FYE+HGGKT+V+A Sbjct: 61 WVLIGLLLAAAISGNTVNYWVGSWIGPKVFDHQWRFLDQKALRRTHDFYERHGGKTLVMA 120 Query: 129 RFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQNLNTLV 188 RF PIVRTFAPF+AGVS M+FARFQ FNV+GA WV GLV GY FGN+P ++Q LN +V Sbjct: 121 RFVPIVRTFAPFVAGVSQMTFARFQFFNVIGAMAWVAGLVFAGYFFGNLPFIKQYLNLIV 180 Query: 189 LIGIVAAVFPIVLGGLWQIWRKLRGKRKVSNA 220 L GI AAV P+VLGGL WR +RG ++ + + Sbjct: 181 LAGIGAAVVPLVLGGL---WRLVRGNKRSTPS 209 >ref|YP_001098756.1| DedA family protein [Herminiimonas arsenicoxydans] emb|CAL60627.1| Protein DedA [Herminiimonas arsenicoxydans] Length = 213 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 138/212 (65%), Positives = 179/212 (84%) Query: 1 MDYLQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTF 60 MD++Q D+++HVDKYLG I QYGALIY VLF I+FCETGLVV PFLPGD+LLFIAG F Sbjct: 1 MDFMQFFDMILHVDKYLGTFIAQYGALIYLVLFTIIFCETGLVVFPFLPGDTLLFIAGAF 60 Query: 61 CATGAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKH 120 CA+G M++WLL++LL+VAA+ GNT+NYWIG +G++V+TH+YRWL+ AL+KTH+FYE H Sbjct: 61 CASGGMNLWLLLSLLIVAAILGNTVNYWIGQRIGEKVFTHDYRWLDRAALQKTHSFYENH 120 Query: 121 GGKTIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVV 180 GGKT+++ARF PIVRTFAPF+AGVS M+F RFQ FNV GA LWV LVV GYLFGNIP++ Sbjct: 121 GGKTLILARFLPIVRTFAPFVAGVSKMTFVRFQFFNVTGAVLWVALLVVGGYLFGNIPII 180 Query: 181 QQNLNTLVLIGIVAAVFPIVLGGLWQIWRKLR 212 + +LNT+VL+G+ AA P+ LG LW++ ++ + Sbjct: 181 RDHLNTIVLVGVGAAAIPVALGALWKLAQRFK 212 >emb|CCA79691.1| putative integral membrane protein DedA (dedA) [blood disease bacterium R229] emb|CCA84885.1| putative integral membrane protein DedA (dedA) [Ralstonia syzygii R24] Length = 218 Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 137/210 (65%), Positives = 177/210 (84%) Query: 4 LQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCAT 63 +QL+D+++HVDK LG+LI+QYGA +Y +LF IVF ETGLVVLPFLPGD+LLFIAG CAT Sbjct: 5 MQLIDIVLHVDKSLGMLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCAT 64 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKHGGK 123 G MD WLL+ LLV AAV GNT+NY++G W+G +V+ + R+L+ EAL KTHAFYE+HGGK Sbjct: 65 GQMDAWLLIALLVTAAVTGNTVNYFVGSWIGPKVFDGHIRFLDHEALLKTHAFYERHGGK 124 Query: 124 TIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQN 183 T+V+ARF P+VRTFAPF+AGVS M+FA+FQLFN++GA LWV LV+ G FGN+PV++ + Sbjct: 125 TLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLWVAILVLSGEAFGNVPVIRDH 184 Query: 184 LNTLVLIGIVAAVFPIVLGGLWQIWRKLRG 213 LNT+VLIG+ AAV P+VLGGLW++ R+ R Sbjct: 185 LNTIVLIGLAAAVVPLVLGGLWKLLRRRRA 214 >ref|YP_003751567.1| hypothetical protein RPSI07_0908 [Ralstonia solanacearum PSI07] emb|CBJ50268.1| putative integral membrane protein DedA (dedA) [Ralstonia solanacearum PSI07] Length = 218 Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 137/210 (65%), Positives = 177/210 (84%) Query: 4 LQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCAT 63 +QL+D+++HVDK LG+LI+QYGA +Y +LF IVF ETGLVVLPFLPGD+LLFIAG CAT Sbjct: 5 MQLIDIVLHVDKSLGMLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCAT 64 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKHGGK 123 G MD WLL+ LLV AAV GNT+NY++G W+G +V+ + R+L+ EAL KTHAFYE+HGGK Sbjct: 65 GQMDAWLLIALLVTAAVMGNTVNYFVGSWIGPKVFDGHIRFLDHEALLKTHAFYERHGGK 124 Query: 124 TIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQN 183 T+V+ARF P+VRTFAPF+AGVS M+FA+FQLFN++GA LWV LV+ G FGN+PV++ + Sbjct: 125 TLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLWVAILVLSGEAFGNVPVIRDH 184 Query: 184 LNTLVLIGIVAAVFPIVLGGLWQIWRKLRG 213 LNT+VLIG+ AAV P+VLGGLW++ R+ R Sbjct: 185 LNTIVLIGLAAAVVPLVLGGLWKLLRRRRA 214 >emb|CBJ37008.1| putative integral membrane protein DedA (dedA) [Ralstonia solanacearum CMR15] Length = 218 Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 136/209 (65%), Positives = 176/209 (84%) Query: 4 LQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCAT 63 +QLLD+++HVDK LG+LI+QYGA +Y +LF IVF ETGLVVLPFLPGD+LLFIAG CAT Sbjct: 5 MQLLDIVLHVDKSLGMLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCAT 64 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKHGGK 123 G MD WLL+ LLV AAV GNT+NY++G W+G +V+ + R+L+ EAL KTHAFYE+HGGK Sbjct: 65 GQMDAWLLIALLVTAAVTGNTVNYFVGTWIGPKVFDGHIRFLDHEALLKTHAFYERHGGK 124 Query: 124 TIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQN 183 T+V+ARF P+VRTFAPF+AGVS M+FA+FQLFN++GA LWV LV+ G FG +PV++ + Sbjct: 125 TLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLWVATLVLSGEAFGTVPVIRDH 184 Query: 184 LNTLVLIGIVAAVFPIVLGGLWQIWRKLR 212 LNT+VL+G+ AAV P+VLGGLW++ R+ R Sbjct: 185 LNTIVLVGLGAAVVPLVLGGLWKLLRRRR 213 >ref|YP_003744780.1| integral membrane protein deda (deda) [Ralstonia solanacearum CFBP2957] emb|CBJ42142.1| putative integral membrane protein DedA (dedA) [Ralstonia solanacearum CFBP2957] Length = 218 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 135/210 (64%), Positives = 175/210 (83%) Query: 4 LQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCAT 63 +QLLD+++HVDK LG+LI+QYGA +Y +LF IVF ETGLVVLPFLPGD+LLFIAG CAT Sbjct: 5 MQLLDIVLHVDKSLGMLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCAT 64 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKHGGK 123 G MD WLL+ LLV AAV GNT+NY++G W+G +V+ + R+L+ EAL KTHAFYE+HGGK Sbjct: 65 GQMDTWLLIALLVTAAVTGNTVNYFVGTWIGPKVFDGHIRFLDHEALLKTHAFYERHGGK 124 Query: 124 TIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQN 183 T+V+ARF P+VRTFAPF+AGVS M+FA+FQLFN++GA LWV LV+ G FG +PV++ + Sbjct: 125 TLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLWVALLVLCGEAFGTVPVIRDH 184 Query: 184 LNTLVLIGIVAAVFPIVLGGLWQIWRKLRG 213 LNT+VL+G+ AAV P+ LGGLW++ R+ R Sbjct: 185 LNTIVLVGLAAAVVPLALGGLWKLLRRRRA 214 >ref|ZP_07676131.1| DedA family protein [Ralstonia sp. 5_7_47FAA] gb|EFP65469.1| DedA family protein [Ralstonia sp. 5_7_47FAA] Length = 219 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 133/210 (63%), Positives = 177/210 (84%) Query: 4 LQLLDVLVHVDKYLGVLIEQYGALIYAVLFLIVFCETGLVVLPFLPGDSLLFIAGTFCAT 63 +QL+D+++HVDK LG+LI+QYGA +Y +LF IVF ETGLVVLPFLPGD+LLFIAG CAT Sbjct: 5 MQLVDIVLHVDKSLGLLIQQYGAWVYVLLFAIVFAETGLVVLPFLPGDTLLFIAGAMCAT 64 Query: 64 GAMDIWLLMTLLVVAAVAGNTLNYWIGGWVGQRVYTHNYRWLNPEALRKTHAFYEKHGGK 123 G MD WLL+ LLV+AA GNT+NY++G W+G +V+ + R+L+ EAL KTH FYE+HGGK Sbjct: 65 GQMDAWLLIVLLVIAATTGNTVNYFVGSWIGPKVFDGHIRFLDHEALMKTHGFYERHGGK 124 Query: 124 TIVIARFTPIVRTFAPFIAGVSAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQN 183 T+V+ARF P+VRTFAPF+AGVS M+FA+FQLFN++GA LWV LV+ G FGN+PV++ + Sbjct: 125 TLVMARFIPVVRTFAPFVAGVSKMTFAKFQLFNMIGAVLWVAILVLSGEAFGNVPVIRDH 184 Query: 184 LNTLVLIGIVAAVFPIVLGGLWQIWRKLRG 213 LNT+VLIG+ AA+ P++LGGLW++ ++ RG Sbjct: 185 LNTIVLIGLGAAIVPLMLGGLWKLLKRRRG 214