BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0283.p (147 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774192.1| hypothetical protein Hsero_0765 [Herbaspiril... 310 4e-83 ref|YP_003774194.1| hypothetical protein Hsero_0767 [Herbaspiril... 138 2e-31 gb|AAW76763.1| hypothetical protein XOO3509 [Xanthomonas oryzae ... 97 6e-19 ref|YP_452339.1| hypothetical protein XOO_3310 [Xanthomonas oryz... 97 8e-19 ref|YP_452341.1| hypothetical protein XOO_3312 [Xanthomonas oryz... 97 1e-18 ref|YP_202149.1| hypothetical protein XOO3510 [Xanthomonas oryza... 96 1e-18 ref|ZP_05133303.1| conserved hypothetical protein [Stenotrophomo... 85 4e-15 ref|YP_452340.1| hypothetical protein XOO_3311 [Xanthomonas oryz... 82 2e-14 ref|YP_452338.1| hypothetical protein XOO_3309 [Xanthomonas oryz... 80 9e-14 ref|ZP_03697951.1| conserved hypothetical protein [Lutiella nitr... 78 3e-13 >ref|YP_003774192.1| hypothetical protein Hsero_0765 [Herbaspirillum seropedicae SmR1] gb|ADJ62284.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 161 Score = 310 bits (795), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 147/147 (100%), Positives = 147/147 (100%) Query: 1 LLLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD 60 LLLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD Sbjct: 15 LLLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD 74 Query: 61 ICCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEVK 120 ICCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEVK Sbjct: 75 ICCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEVK 134 Query: 121 VFVTSLATWHPDYPLQGKDVELKSVLH 147 VFVTSLATWHPDYPLQGKDVELKSVLH Sbjct: 135 VFVTSLATWHPDYPLQGKDVELKSVLH 161 >ref|YP_003774194.1| hypothetical protein Hsero_0767 [Herbaspirillum seropedicae SmR1] gb|ADJ62286.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 165 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 1/144 (0%) Query: 1 LLLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD 60 L +LA++ GC +AE+ T++ YNH I +F+ Q KGG ++ GG++ G GGG Sbjct: 18 LAMLAIVSGCSNAEAPAARMTLNLVPYNHMTDGIANFDVQVKGGSKSGGGYLHAGSGGGS 77 Query: 61 -ICCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEV 119 ICC S+P +W P LT +V A +G I++EVP+P Y + AGHL +HFLR+GEV Sbjct: 78 MICCVSIPEKWQPGLTAKVTAEVYRSSGEKYDIAKEVPIPEYTREQAGHLSVHFLRDGEV 137 Query: 120 KVFVTSLATWHPDYPLQGKDVELK 143 K+FVT A WHPDYPL+G++ ELK Sbjct: 138 KIFVTRYALWHPDYPLKGREAELK 161 >gb|AAW76763.1| hypothetical protein XOO3509 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 202 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 74/143 (51%), Gaps = 16/143 (11%) Query: 1 LLLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD 60 L LL L C ES G N YNHTD I F + GGF+ GGG Sbjct: 63 LGLLPCLAACGQ-ESVGVNLV----GYNHTDKDIGHFTVD-----GSEGGFLQANRGGGG 112 Query: 61 I-CCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEV 119 CC +P W P +TV V W D R +P+PRYA G + +HFLRNG++ Sbjct: 113 FACCIDIPKPWKPGMTVTV--GWTDDYDE-NYQERRLPVPRYAKY--GDMAVHFLRNGQI 167 Query: 120 KVFVTSLATWHPDYPLQGKDVEL 142 KVFVT A WHPDYPL+GK+ EL Sbjct: 168 KVFVTMYALWHPDYPLKGKEAEL 190 >ref|YP_452339.1| hypothetical protein XOO_3310 [Xanthomonas oryzae pv. oryzae MAFF 311018] ref|YP_202148.6| hypothetical protein XOO3509 [Xanthomonas oryzae pv. oryzae KACC10331] dbj|BAE70065.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 154 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 74/143 (51%), Gaps = 16/143 (11%) Query: 1 LLLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD 60 L LL L C ES G N YNHTD I F + GGF+ GGG Sbjct: 15 LGLLPCLAACGQ-ESVGVNLV----GYNHTDKDIGHFTVD-----GSEGGFLQANRGGGG 64 Query: 61 I-CCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEV 119 CC +P W P +TV V W D R +P+PRYA G + +HFLRNG++ Sbjct: 65 FACCIDIPKPWKPGMTVTV--GWTDDYDE-NYQERRLPVPRYAKY--GDMAVHFLRNGQI 119 Query: 120 KVFVTSLATWHPDYPLQGKDVEL 142 KVFVT A WHPDYPL+GK+ EL Sbjct: 120 KVFVTMYALWHPDYPLKGKEAEL 142 >ref|YP_452341.1| hypothetical protein XOO_3312 [Xanthomonas oryzae pv. oryzae MAFF 311018] dbj|BAE70067.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 154 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 73/143 (51%), Gaps = 16/143 (11%) Query: 1 LLLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD 60 L LL L C ES G N YNHTD I F + GGF+ GGG Sbjct: 15 LGLLPCLAACGQ-ESVGVNLV----GYNHTDKDIGHFTVD-----GSEGGFLQANRGGGK 64 Query: 61 I-CCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEV 119 CC +P W P +TV V W D R VP+PRY G + +HFLRNG++ Sbjct: 65 FACCIDIPKPWKPGMTVTV--GWTDDYDE-NYQERRVPVPRYDK--YGDMAVHFLRNGQI 119 Query: 120 KVFVTSLATWHPDYPLQGKDVEL 142 KVFVT A WHPDYPL+GK+ EL Sbjct: 120 KVFVTMYALWHPDYPLKGKEAEL 142 >ref|YP_202149.1| hypothetical protein XOO3510 [Xanthomonas oryzae pv. oryzae KACC10331] gb|AAW76764.1| hypothetical protein XOO3510 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 154 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 73/143 (51%), Gaps = 16/143 (11%) Query: 1 LLLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD 60 L LL L C ES G N YNHTD I F + GGF+ GGG Sbjct: 15 LGLLPCLAACGQ-ESVGVNLV----GYNHTDKDIGHFTVD-----GSEGGFLQANRGGGK 64 Query: 61 I-CCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEV 119 CC +P W P +TV V W D R VP+PRY G + +HFLRNG++ Sbjct: 65 FACCIDIPKPWKPGMTVTV--GWTDDYDE-NYQERRVPVPRY--DKYGDMAVHFLRNGQI 119 Query: 120 KVFVTSLATWHPDYPLQGKDVEL 142 KVFVT A WHPDYPL+GK+ EL Sbjct: 120 KVFVTMYALWHPDYPLKGKEAEL 142 >ref|ZP_05133303.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14] gb|EED37364.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14] Length = 125 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 11/118 (9%) Query: 27 YNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGDICCASVPMQWTPTLTVQVRASWKDGA 86 YNHTD I +F GG +GG GG +CCA +P +WTP + V++ W Sbjct: 4 YNHTDAYIA--QFLVNGG---SGGSADSHSEGGTVCCAMLPDRWTPDMKVEIE--WTTDL 56 Query: 87 GVVQAISREVPLPRYASKDAGHLDIHFLRNGEVKVFVTSLATWHPDYPLQGKDVELKS 144 Q + V +P+Y G+L +HFLRNG+VKVFVT L HPDYPL G + L+ Sbjct: 57 ETFQKTT--VAVPKY--DQLGNLAVHFLRNGQVKVFVTGLVLGHPDYPLTGPEAPLRE 110 >ref|YP_452340.1| hypothetical protein XOO_3311 [Xanthomonas oryzae pv. oryzae MAFF 311018] dbj|BAE70066.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 159 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Query: 2 LLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGDI 61 +L +L+ A G T + YNHTD + F GGF+ GGG Sbjct: 7 VLYGLLLTWISACHGGNTVTTNLVGYNHTDKDVGHFTVDGN-----EGGFLQAHRGGGGF 61 Query: 62 -CCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEVK 120 CC SVP W P L V+V W D R V +P+Y +K G +HFLRNGE+K Sbjct: 62 TCCISVPDPWRPGLKVKV--GWTDDYDE-NYQERVVEIPKYDAKRTGQFSVHFLRNGEIK 118 Query: 121 VFVTSLATWHPDYPLQGKDVEL 142 VFV PDYPL+G + L Sbjct: 119 VFVPLGGLGGPDYPLKGPEAGL 140 >ref|YP_452338.1| hypothetical protein XOO_3309 [Xanthomonas oryzae pv. oryzae MAFF 311018] dbj|BAE70064.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 159 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Query: 2 LLLAMLIGCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGD- 60 +L +L+ A G + YNHTD + F GGF+ GGG Sbjct: 7 VLYGLLLMWISACHGGNTVSTTLVGYNHTDKDVGHFTVDGN-----EGGFLQAHRGGGKF 61 Query: 61 ICCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASKDAGHLDIHFLRNGEVK 120 +CC SVP W P V+V+ W D R V +P+Y +K G +HFLRNGE+K Sbjct: 62 VCCISVPDPWRPG--VKVKVGWTDDYDE-NYQERVVEIPKYDAKRTGQFSVHFLRNGEIK 118 Query: 121 VFVTSLATWHPDYPLQGKDVEL 142 VFV PDYPL+G + L Sbjct: 119 VFVPLGGLGGPDYPLKGPEAGL 140 >ref|ZP_03697951.1| conserved hypothetical protein [Lutiella nitroferrum 2002] gb|EEG09513.1| conserved hypothetical protein [Lutiella nitroferrum 2002] Length = 169 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 67/142 (47%), Gaps = 25/142 (17%) Query: 9 GCKDAESRGENYTMDFGAYNHTDHSIDDFEFQFKGGQRAAGGFVGKGEGGGDICCASVPM 68 GCK+ + + + A NHTD S+ +GG A G GG ++CC VP Sbjct: 23 GCKE-----DTTALSYLAVNHTDKSVLSITINGQGGILNASAM---GGGGKEVCCVVVPS 74 Query: 69 QWTPTLTVQV----RASW---KDGAGVVQA----------ISREVPLPRYASKDAGHLDI 111 +W P LT + W K+G V++ +R VP+P+Y D GH DI Sbjct: 75 KWRPGLTATIGWENDGDWLRDKNGQPVIRDGKKVYVPAPWKTRTVPIPQYTENDMGHFDI 134 Query: 112 HFLRNGEVKVFVTSLATWHPDY 133 HFL N +V V V+ L HPDY Sbjct: 135 HFLPNDQVMVKVSYLYPHHPDY 156