BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0276.p (85 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774187.1| hypothetical protein Hsero_0760 [Herbaspiril... 165 2e-39 ref|ZP_05134248.1| paar motif family protein [Stenotrophomonas s... 109 1e-22 ref|YP_002257522.1| hypothetical protein RSIPO_03827 [Ralstonia ... 104 4e-21 gb|EGC98890.1| hypothetical protein B1M_39331 [Burkholderia sp. ... 103 1e-20 ref|YP_452350.1| hypothetical protein XOO_3321 [Xanthomonas oryz... 103 1e-20 ref|YP_285399.1| PAAR [Dechloromonas aromatica RCB] >gi|71847433... 102 1e-20 ref|YP_003749669.1| hypothetical protein RPSI07_mp0689 [Ralstoni... 102 1e-20 ref|YP_001912491.1| paar motif family [Xanthomonas oryzae pv. or... 102 2e-20 emb|CBJ40382.1| conserved hypothethical protein with PAAR_motif ... 102 2e-20 ref|NP_522326.1| hypothetical protein RS01943 [Ralstonia solanac... 102 2e-20 >ref|YP_003774187.1| hypothetical protein Hsero_0760 [Herbaspirillum seropedicae SmR1] gb|ADJ62279.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 85 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 85/85 (100%), Positives = 85/85 (100%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPRHGSTTIASGDPTMIIDG 60 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPRHGSTTIASGDPTMIIDG Sbjct: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPRHGSTTIASGDPTMIIDG 60 Query: 61 APVARDGDKTACGAVLIASQATTSV 85 APVARDGDKTACGAVLIASQATTSV Sbjct: 61 APVARDGDKTACGAVLIASQATTSV 85 >ref|ZP_05134248.1| paar motif family protein [Stenotrophomonas sp. SKA14] gb|EED38309.1| paar motif family protein [Stenotrophomonas sp. SKA14] Length = 86 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/85 (62%), Positives = 68/85 (80%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPRHGSTTIASGDPTMIIDG 60 M++P IV+GDK SHGG+V+ +G T + GK VARVGD+ C HG+T+I SGD T++IDG Sbjct: 1 MARPFIVVGDKLSHGGSVVAGTGQTDINGKAVARVGDRAVCAVHGATSIVSGDATVVIDG 60 Query: 61 APVARDGDKTACGAVLIASQATTSV 85 PVARDGD+TACGA L+ASQATT + Sbjct: 61 QPVARDGDRTACGATLMASQATTGL 85 >ref|YP_002257522.1| hypothetical protein RSIPO_03827 [Ralstonia solanacearum IPO1609] emb|CAQ36670.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] emb|CAQ59408.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] gb|AEG71726.1| conserved hypothetical protein [Ralstonia solanacearum Po82] Length = 89 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 3/86 (3%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPR--HGSTT-IASGDPTMI 57 M++P I+LGDKT HGG VI ASG T+ GGK +A VGDKV+CP+ HG TT I +GDPT++ Sbjct: 1 MTRPFILLGDKTDHGGVVITASGNTIAGGKGIACVGDKVTCPKSGHGGTTVIVTGDPTVV 60 Query: 58 IDGAPVARDGDKTACGAVLIASQATT 83 IDG AR GDKTACGA L+ASQ TT Sbjct: 61 IDGRLAARHGDKTACGATLLASQGTT 86 >gb|EGC98890.1| hypothetical protein B1M_39331 [Burkholderia sp. TJI49] Length = 86 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/83 (63%), Positives = 61/83 (73%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPRHGSTTIASGDPTMIIDG 60 M++P IVLGDK SHGGTV AS + +GGK +AR DKV+CP HG IA GD T IIDG Sbjct: 1 MTRPFIVLGDKHSHGGTVTSASTLADIGGKGIARRNDKVTCPVHGPNYIAEGDDTAIIDG 60 Query: 61 APVARDGDKTACGAVLIASQATT 83 + ARDG KTACGA LIA Q+TT Sbjct: 61 SGAARDGYKTACGATLIAGQSTT 83 >ref|YP_452350.1| hypothetical protein XOO_3321 [Xanthomonas oryzae pv. oryzae MAFF 311018] dbj|BAE70076.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 86 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/85 (61%), Positives = 63/85 (74%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPRHGSTTIASGDPTMIIDG 60 MS+P IV+GD+ HGG V+ S T V GK VAR+GDKV C HG T IASGD T++IDG Sbjct: 1 MSRPFIVVGDQLDHGGRVVTGSAETDVDGKPVARIGDKVVCNVHGQTEIASGDATVMIDG 60 Query: 61 APVARDGDKTACGAVLIASQATTSV 85 PVAR GDKTACG +LI++Q TT + Sbjct: 61 KPVARHGDKTACGGILISTQGTTGI 85 >ref|YP_285399.1| PAAR [Dechloromonas aromatica RCB] gb|AAZ46929.1| PAAR protein [Dechloromonas aromatica RCB] Length = 88 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 3/87 (3%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPRHGS---TTIASGDPTMI 57 MS+P I+LGDKT HGG VI AS + GK VARVGD+V+CP+ G TTI +GD T + Sbjct: 1 MSRPFILLGDKTDHGGVVITASESSDCNGKGVARVGDQVTCPKRGHGNVTTIVTGDSTAL 60 Query: 58 IDGAPVARDGDKTACGAVLIASQATTS 84 IDG P AR GDKTACGA+LIASQ+ T+ Sbjct: 61 IDGRPAARHGDKTACGAILIASQSLTT 87 >ref|YP_003749669.1| hypothetical protein RPSI07_mp0689 [Ralstonia solanacearum PSI07] emb|CBJ35037.1| conserved hypothethical protein with PAAR_motif [Ralstonia solanacearum PSI07] Length = 89 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 3/86 (3%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPR--HGSTT-IASGDPTMI 57 M++P I+LGDKT HGG VI ASG T GGK +A VGDKV+CP+ HG TT I +GDP ++ Sbjct: 1 MTRPFILLGDKTDHGGVVITASGNTTTGGKGIACVGDKVTCPKSGHGGTTVIVTGDPNVV 60 Query: 58 IDGAPVARDGDKTACGAVLIASQATT 83 IDG AR GDKTACGA L+ASQ TT Sbjct: 61 IDGRQAARHGDKTACGATLLASQGTT 86 >ref|YP_001912491.1| paar motif family [Xanthomonas oryzae pv. oryzae PXO99A] gb|ACD57959.1| paar motif family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 86 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/85 (61%), Positives = 63/85 (74%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPRHGSTTIASGDPTMIIDG 60 MS+P IV+GD+ HGG+V+ S T V GK VAR+GDKV C HG T IASGD T++IDG Sbjct: 1 MSRPFIVVGDQLDHGGSVVTGSAETDVDGKPVARIGDKVVCNVHGQTEIASGDATVMIDG 60 Query: 61 APVARDGDKTACGAVLIASQATTSV 85 PVAR GDKTACG LI++Q TT + Sbjct: 61 KPVARHGDKTACGGTLISTQGTTGI 85 >emb|CBJ40382.1| conserved hypothethical protein with PAAR_motif [Ralstonia solanacearum CMR15] Length = 89 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/86 (63%), Positives = 66/86 (76%), Gaps = 3/86 (3%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPR--HGSTT-IASGDPTMI 57 M++P I+LGDKT HGG VI ASG T GGK +A VGDKV+CP+ HG TT I +GDP ++ Sbjct: 1 MTRPFILLGDKTDHGGVVITASGNTTTGGKGIACVGDKVTCPQSGHGGTTVIVTGDPNVV 60 Query: 58 IDGAPVARDGDKTACGAVLIASQATT 83 IDG AR GDKTACGA L+ASQ+TT Sbjct: 61 IDGRQAARHGDKTACGATLLASQSTT 86 >ref|NP_522326.1| hypothetical protein RS01943 [Ralstonia solanacearum GMI1000] emb|CAD17916.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000] Length = 89 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 3/86 (3%) Query: 1 MSQPVIVLGDKTSHGGTVIQASGVTMVGGKQVARVGDKVSCPR--HGSTT-IASGDPTMI 57 M++P I+LGDKT HGG VI ASG T GGK +A VGDKV+CP+ HG TT I +GDP ++ Sbjct: 1 MTRPFILLGDKTDHGGVVITASGNTTTGGKGIACVGDKVTCPQSGHGGTTVIVTGDPNVV 60 Query: 58 IDGAPVARDGDKTACGAVLIASQATT 83 IDG AR GDKTACGA L+ASQ TT Sbjct: 61 IDGRQAARHGDKTACGATLLASQGTT 86