BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0274.p (1286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774185.1| transmembrane protein [Herbaspirillum serope... 2553 0.0 ref|YP_003777406.1| transmembrane protein [Herbaspirillum serope... 2156 0.0 ref|YP_004750720.1| putative transmembrane protein [Collimonas f... 1777 0.0 ref|ZP_07677455.1| type VI secretion protein IcmF [Ralstonia sp.... 1578 0.0 ref|ZP_06842757.1| type VI secretion protein IcmF [Burkholderia ... 1571 0.0 ref|YP_001888657.1| type VI secretion protein IcmF [Burkholderia... 1559 0.0 ref|ZP_04968136.1| conserved hypothetical protein [Burkholderia ... 1559 0.0 ref|ZP_02413185.1| hypothetical protein Bpse14_20270 [Burkholder... 1558 0.0 ref|ZP_04887054.1| conserved hypothetical protein [Burkholderia ... 1558 0.0 ref|ZP_02887539.1| type VI secretion protein IcmF [Burkholderia ... 1557 0.0 >ref|YP_003774185.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62277.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1291 Score = 2553 bits (6617), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1275/1291 (98%), Positives = 1277/1291 (98%), Gaps = 5/1291 (0%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW Sbjct: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 Query: 61 KVRRAAGKLGEVLEQQATQSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGSAA 120 KVRRAAGKLGEVLEQQATQSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGSAA Sbjct: 61 KVRRAAGKLGEVLEQQATQSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGSAA 120 Query: 121 LYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILLDT 180 LYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILLDT Sbjct: 121 LYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILLDT 180 Query: 181 AGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLRQR 240 AGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLRQR Sbjct: 181 AGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLRQR 240 Query: 241 VQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAYDRKRSGQEVVS 300 VQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAYDRKRSGQEVVS Sbjct: 241 VQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAYDRKRSGQEVVS 300 Query: 301 FFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFEENPF 360 FFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFEENPF Sbjct: 301 FFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFEENPF 360 Query: 361 QFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQREIFSQHGFFLHNLFKQVI 420 QFKPVFRGFYFTSAVQEGATVSASSQRIADRFGL LEHKPQREIFSQHGFFLHNLFKQVI Sbjct: 361 QFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLALEHKPQREIFSQHGFFLHNLFKQVI 420 Query: 421 FADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADMDKAVK 480 FADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADMDKAVK Sbjct: 421 FADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADMDKAVK 480 Query: 481 LQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYFSGIKE 540 LQEKRLDLQSRFEALEILQDRIEQLDRYRASRP+SVGMGLYQGDLLERKLREEYFSGIKE Sbjct: 481 LQEKRLDLQSRFEALEILQDRIEQLDRYRASRPISVGMGLYQGDLLERKLREEYFSGIKE 540 Query: 541 IMLKPVASNIESYLMEVNANAARLEPMSRPPQSGGITPVADNGAQAASALRTYKDSSATS 600 IMLKPVASNIESYLMEVNANAARLEPMSRPPQSGGITPVADNGAQAASALRTYKDSSATS Sbjct: 541 IMLKPVASNIESYLMEVNANAARLEPMSRPPQSGGITPVADNGAQAASALRTYKDSSATS 600 Query: 601 VEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETNRGTMPREQMIRSAERLISFS 660 VEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETNRGTMPREQMIRSAERLISFS Sbjct: 601 VEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETNRGTMPREQMIRSAERLISFS 660 Query: 661 LEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVYADVKARAATRFASMTVARIV 720 LEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVYADVKARAATRFASMTVARIV Sbjct: 661 LEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVYADVKARAATRFASMTVARIV 720 Query: 721 GDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQSADWVLKTSAKDDLTLEGSP 780 GDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQSADWVLKTSAKDDLTLEGSP Sbjct: 721 GDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQSADWVLKTSAKDDLTLEGSP 780 Query: 781 EQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNAMNRLGDPITSPMKKVINTVY 840 EQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNAMNRLGDPITSPMKKVINTVY Sbjct: 781 EQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNAMNRLGDPITSPMKKVINTVY 840 Query: 841 DETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPTQFNADGTTAIPMGPVGREFS 900 DETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPTQFNADGTTAIPMGPVGREFS Sbjct: 841 DETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPTQFNADGTTAIPMGPVGREFS 900 Query: 901 GVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDTGPGAKQLMQQTLEGNGSELSD 960 GVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDTGPGAKQLMQQTLEGNGSELSD Sbjct: 901 GVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDTGPGAKQLMQQTLEGNGSELSD 960 Query: 961 SLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRPTEGEVNKIWRAQVYEPFQSNL 1020 SLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRPTEGEVNKIWRAQVYEPFQSNL Sbjct: 961 SLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRPTEGEVNKIWRAQVYEPFQSNL 1020 Query: 1021 AAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGPLVVRRGDTLSPRKWADMGINL 1080 AAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGPLVVRRGDTLSPRKWADMGINL Sbjct: 1021 AAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGPLVVRRGDTLSPRKWADMGINL 1080 Query: 1081 SPAITSNFASWISAP-GGGEANGGANSAQTVFQIQPQPAPGALEYTIEIDGQQLRYRNTQ 1139 SPAITSNFASWISAP GGG+ANGGANSAQTVFQIQPQPAPGALEYTIEIDGQQLRYRNTQ Sbjct: 1081 SPAITSNFASWISAPGGGGDANGGANSAQTVFQIQPQPAPGALEYTIEIDGQQLRYRNTQ 1140 Query: 1140 AQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRFGLERLINSAQRKRKDNGVFELS 1199 AQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRFGLERLINSAQRKRKDNGVFELS Sbjct: 1141 AQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRFGLERLINSAQRKRKDNGVFELS 1200 Query: 1200 WTNEGVTVVVNLKIISSAEVSGTANGPARGTASLRGLKLPETIAG----GAPAPTPAGAA 1255 WTNEGVTVVVNLKIISSAEVSGTANGPARGTASLRGLKLPETIAG AP PAGAA Sbjct: 1201 WTNEGVTVVVNLKIISSAEVSGTANGPARGTASLRGLKLPETIAGGAPAPVLAPAPAGAA 1260 Query: 1256 PMQPMQPAQPMATDAAAPQSNNQPTITGVKQ 1286 PMQP QPMATDAAAPQSNNQPTITGVKQ Sbjct: 1261 GTAPMQPGQPMATDAAAPQSNNQPTITGVKQ 1291 >ref|YP_003777406.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65498.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1266 Score = 2156 bits (5587), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1065/1250 (85%), Positives = 1145/1250 (91%), Gaps = 2/1250 (0%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 MQRLW LSDTR L ++GF ALAA LFIGA LELA W AV+ LL WL Y+RW Sbjct: 1 MQRLWKILSDTRVLTLLGFMALAAVLFIGAEQLELAPIWPAVLFCALLLAWLALRRYQRW 60 Query: 61 KVRRAAGKLGEVLEQQATQSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGSAA 120 K +RAA KL VLEQQA Q + S+ A+ ++VAALR RMLEAINTIKTSKLGQKSG+AA Sbjct: 61 KAQRAATKLENVLEQQAAQPLPVDSEAARHDDVAALRQRMLEAINTIKTSKLGQKSGAAA 120 Query: 121 LYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILLDT 180 LYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILLDT Sbjct: 121 LYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILLDT 180 Query: 181 AGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLRQR 240 AGRYSVYEEDR EWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLRQR Sbjct: 181 AGRYSVYEEDRREWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLRQR 240 Query: 241 VQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAYDRKRSGQEVVS 300 VQELTEKLEVFAPVYVVFTK DLITGFNEFFLD+ER ERDRVWGATLAYDRK SGQEV + Sbjct: 241 VQELTEKLEVFAPVYVVFTKTDLITGFNEFFLDSERGERDRVWGATLAYDRKHSGQEVSN 300 Query: 301 FFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFEENPF 360 FFDERFDELYAGLKEMSLA+M+VKRGEN+APGVLTFPLEFS+ KGVLRSFV TLFEENPF Sbjct: 301 FFDERFDELYAGLKEMSLANMAVKRGENLAPGVLTFPLEFSAFKGVLRSFVTTLFEENPF 360 Query: 361 QFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQREIFSQHGFFLHNLFKQVI 420 QFKPVFRGFYFTSA+QEGAT+ AS+QRIADRFGL LE +PQRE+ S+ GFFLHNLFKQVI Sbjct: 361 QFKPVFRGFYFTSALQEGATLGASAQRIADRFGLTLEDQPQREVLSKQGFFLHNLFKQVI 420 Query: 421 FADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADMDKAVK 480 FADKQLVAQYTSR KIRMRY TFFAA+A+LG LLGGWSWSYMGNRQL+ANVQADMDKA+K Sbjct: 421 FADKQLVAQYTSRNKIRMRYLTFFAALAMLGALLGGWSWSYMGNRQLVANVQADMDKAIK 480 Query: 481 LQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYFSGIKE 540 LQEKRLDLQSRFEALEILQDRIEQLDRYR+ RP+S+ +GLYQGDLLERKLREEYF+GIKE Sbjct: 481 LQEKRLDLQSRFEALEILQDRIEQLDRYRSHRPVSIDLGLYQGDLLERKLREEYFAGIKE 540 Query: 541 IMLKPVASNIESYLMEVNANAARLEPMSRPPQSGGITPVADNGAQAASALRTYKDSSATS 600 IMLKPVAS+IE+YL+EVNAN+++LEPMSRPPQ+ + DN A +ALRTYKDSSAT+ Sbjct: 541 IMLKPVASSIENYLIEVNANSSKLEPMSRPPQADSLATTGDNNIHAGNALRTYKDSSATN 600 Query: 601 VEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETNRGTMPREQMIRSAERLISFS 660 VEDAYNALKTYLML+DKSRAE+SHLNDQITRFWRGWLETNRGTMPREQMIRSAERLISFS Sbjct: 601 VEDAYNALKTYLMLSDKSRAEASHLNDQITRFWRGWLETNRGTMPREQMIRSAERLISFS 660 Query: 661 LEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVYADVKARAATRFASMTVARIV 720 LEQI+DPSWPT +NKLTLVDQ RENLR VVRGMPARERVYADVKARAATRFASMTVARIV Sbjct: 661 LEQIDDPSWPTTENKLTLVDQTRENLRHVVRGMPARERVYADVKARAATRFASMTVARIV 720 Query: 721 GDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQSADWVLKTSAKDDLTLEGSP 780 GDKDRELVMGSYAIPGTFTR+AWEKFV++AFKEAANKELQSADWVLKTS+K+DLTLEGSP Sbjct: 721 GDKDRELVMGSYAIPGTFTRNAWEKFVEDAFKEAANKELQSADWVLKTSSKEDLTLEGSP 780 Query: 781 EQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNAMNRLGDPITSPMKKVINTVY 840 EQIQKALV+QYK+EYAREWQKFLQGVSIVEL NLDDATNAMNRLGDP+TSP+ KVI+TVY Sbjct: 781 EQIQKALVSQYKSEYAREWQKFLQGVSIVELHNLDDATNAMNRLGDPLTSPINKVISTVY 840 Query: 841 DETSWDNPSLVDAGLANAKSGFMGWFKETILRRS--PAPAPTQFNADGTTAIPMGPVGRE 898 DETSWDNPSL+ +GLA A G GWFKET+LRRS P PAP Q N DG AIPMGPV RE Sbjct: 841 DETSWDNPSLIGSGLATASRGLSGWFKETVLRRSPAPPPAPPQLNTDGGAAIPMGPVARE 900 Query: 899 FSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDTGPGAKQLMQQTLEGNGSEL 958 F+GVARLVVSKDK SL++ Y++NLSKLRTRLNTIKNQGDTGPGAKQLMQQTL+G+GSEL Sbjct: 901 FAGVARLVVSKDKGNSLMRGYMENLSKLRTRLNTIKNQGDTGPGAKQLMQQTLDGSGSEL 960 Query: 959 SDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRPTEGEVNKIWRAQVYEPFQS 1018 SD+LKFVDEEMLPGLNDQQKT LRPLLVRPLVQGFNALV PTEGE+NKIWRAQVYEPFQ+ Sbjct: 961 SDALKFVDEEMLPGLNDQQKTTLRPLLVRPLVQGFNALVHPTEGELNKIWRAQVYEPFQN 1020 Query: 1019 NLAAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGPLVVRRGDTLSPRKWADMGI 1078 NLA KYPFSP+SKIEANSGEI TVFGE+GAISKFVTTAMGPLVVRRGDTLSPRKWADMGI Sbjct: 1021 NLATKYPFSPSSKIEANSGEINTVFGESGAISKFVTTAMGPLVVRRGDTLSPRKWADMGI 1080 Query: 1079 NLSPAITSNFASWISAPGGGEANGGANSAQTVFQIQPQPAPGALEYTIEIDGQQLRYRNT 1138 LSPAIT++FA WIS G A GGA AQTVFQIQPQPAPGALEYTIEIDGQQLRYRNT Sbjct: 1081 TLSPAITTSFADWISTHGSTGAGGGAGDAQTVFQIQPQPAPGALEYTIEIDGQQLRYRNT 1140 Query: 1139 QAQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRFGLERLINSAQRKRKDNGVFEL 1198 QAQW NF+WPNPQG+PGARVTA TYDGRT+EVASQPGRFGLERLIN+AQRKRKDNG FEL Sbjct: 1141 QAQWVNFVWPNPQGSPGARVTAVTYDGRTVEVASQPGRFGLERLINTAQRKRKDNGAFEL 1200 Query: 1199 SWTNEGVTVVVNLKIISSAEVSGTANGPARGTASLRGLKLPETIAGGAPA 1248 SWTNEGVTV+V+LKIISSAEVSG +G ARGTA LRGLKLPETIAGG A Sbjct: 1201 SWTNEGVTVMVSLKIISSAEVSGNGSGTARGTAGLRGLKLPETIAGGGSA 1250 >ref|YP_004750720.1| putative transmembrane protein [Collimonas fungivorans Ter331] gb|AEK59897.1| putative transmembrane protein [Collimonas fungivorans Ter331] Length = 1310 Score = 1777 bits (4602), Expect = 0.0, Method: Compositional matrix adjust. Identities = 855/1268 (67%), Positives = 1028/1268 (81%), Gaps = 21/1268 (1%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 MQR+W FL++TRTL ++GF ALA FLF+ A L++ W V L LL W LYR+ Sbjct: 1 MQRIWQFLTNTRTLAVVGFVALACFLFLAADALQIDGIWVVVFLVAILLVWGLVVLYRKQ 60 Query: 61 KVRRAAGKLGEVLEQQATQSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGSAA 120 + + A+ +LE QA + S R+E +R RMLEAI+TIK SKLG+KSG+ A Sbjct: 61 RTKTASKDFSSMLEGQAEKGSDKPS-VVGRDETETIRKRMLEAISTIKNSKLGEKSGATA 119 Query: 121 LYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILLDT 180 LYELPWYM+IGNPAAGKSTA+ANSGLQFP ADK IV GVGGTRNCDWFFTTDGILLDT Sbjct: 120 LYELPWYMIIGNPAAGKSTAVANSGLQFPLADKNSNIVQGVGGTRNCDWFFTTDGILLDT 179 Query: 181 AGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLRQR 240 AGRYSV+EEDR EWFSFLGLLK++R +APINGIIIAVS+AEL GNRPEF INLAKNLRQR Sbjct: 180 AGRYSVHEEDRAEWFSFLGLLKKHRSRAPINGIIIAVSVAELAGNRPEFGINLAKNLRQR 239 Query: 241 VQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAYDRKRSGQEVVS 300 VQELTEKLEVFAPVYV+FTKADLITGF EFF+D +R E+DRVWGATL Y RK S Q+V++ Sbjct: 240 VQELTEKLEVFAPVYVMFTKADLITGFTEFFVDMDRGEKDRVWGATLPYSRKTSSQDVLA 299 Query: 301 FFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFEENPF 360 +FDERFDEL+ GLKE+SLA+M++ RG+ + PGVLTFPLEF+++K LR+F+ATLFEENPF Sbjct: 300 YFDERFDELFEGLKEISLANMALSRGDRLPPGVLTFPLEFAAVKSSLRAFIATLFEENPF 359 Query: 361 QFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQREIFSQHGFFLHNLFKQVI 420 QFKPVFRGFYFTSA+QEG+ +S SS+RIA+RF L L+ + EI S+HGFFL NLF++VI Sbjct: 360 QFKPVFRGFYFTSALQEGSGLSTSSERIAERFDLKLQPLERPEIHSKHGFFLLNLFRKVI 419 Query: 421 FADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADMDKAVK 480 FADK LV+QY SR K R+RY FFAA A +G+ L GWSWSY+GNRQL ANVQAD+DKA+K Sbjct: 420 FADKDLVSQYASRHKTRLRYTMFFAATAFVGLALAGWSWSYIGNRQLTANVQADLDKAIK 479 Query: 481 LQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYFSGIKE 540 LQEKRLDLQSRFEA+EILQDRIEQL +Y RPLSVG GLYQG+LLE+KLREEYF+G+K+ Sbjct: 480 LQEKRLDLQSRFEAMEILQDRIEQLQKYDNHRPLSVGFGLYQGELLEQKLREEYFAGVKD 539 Query: 541 IMLKPVASNIESYLMEVNANAARLEPMSRPPQ-----------SGGITPVADNGAQAASA 589 IMLKPV +NIES+L E+NA+A LEPMSRP Q + A A A + Sbjct: 540 IMLKPVTANIESFLSEMNAHAGSLEPMSRPVQLVAGAAQPAAGAAAAASTAAAQAANAGS 599 Query: 590 LRTYKDSSATSVEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETNRGTMPREQM 649 + YKDSS T+VED YNALKTYLML+D+SRAESSHLNDQ+TRFWRGWLE+NRG M REQM Sbjct: 600 TQQYKDSSPTNVEDGYNALKTYLMLSDRSRAESSHLNDQLTRFWRGWLESNRGNMTREQM 659 Query: 650 IRSAERLISFSLEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVYADVKARAAT 709 IRSAERL+SF L Q++DPSWPTI++KLTLVDQ+R+NLRRVVRGM AR+RVYAD+KARA+T Sbjct: 660 IRSAERLMSFYLSQVSDPSWPTIESKLTLVDQSRDNLRRVVRGMAARDRVYADIKARAST 719 Query: 710 RFASMTVARIVGDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQSADWVLKTS 769 RF S+TVA IVGD+D+EL++GSYAIPGTFTRDAWEKFVQ AFKEAANKELQSADWVLKT+ Sbjct: 720 RFPSITVASIVGDQDKELIVGSYAIPGTFTRDAWEKFVQGAFKEAANKELQSADWVLKTA 779 Query: 770 AKDDLTLEGSPEQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNAMNRLGDPIT 829 + DDLTLEGSPEQIQKALVTQYKTEYA+EWQKF+QG +I +L D+A AMNR GDP T Sbjct: 780 SSDDLTLEGSPEQIQKALVTQYKTEYAKEWQKFMQGANIADLGGFDNAVKAMNRFGDPST 839 Query: 830 SPMKKVINTVYDETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPTQFNADGT-- 887 SP+ K + VY +TSWDNPSL++ GL A+SGF+ WFK+TILR++P+ N + + Sbjct: 840 SPINKFVTAVYQQTSWDNPSLLNTGLGRAQSGFIAWFKQTILRQAPSGVNVNVNLNTSTD 899 Query: 888 -TAIPMGPVGREFSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDTGPGAKQL 946 TA PMGPVG+EF+GVAR+V +KDK+ +L++ Y+++LSKLRTR N IKNQGDTGPGA QL Sbjct: 900 PTAAPMGPVGKEFAGVARMVTAKDKDATLMRGYMESLSKLRTRFNQIKNQGDTGPGANQL 959 Query: 947 MQQTLEGNGSELSDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRPTEGEVNK 1006 MQQTL G+GSEL+D+LK+VDE+ML G++D QK +RP+LVRPL+Q F ++PTE E+N+ Sbjct: 960 MQQTLNGSGSELADALKYVDEQMLVGMSDSQKQAIRPILVRPLIQAFAVTIKPTEAEMNR 1019 Query: 1007 IWRAQVYEPFQSNLAAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGPLVVRRGD 1066 W AQVY PF+ LA KYPF+ NSKIEA S EIG FG +G+I+KFV ++MGPLVVRRGD Sbjct: 1020 TWLAQVYSPFEKTLAEKYPFAANSKIEATSAEIGQTFGPDGSIAKFVNSSMGPLVVRRGD 1079 Query: 1067 TLSPRKWADMGINLSPAITSNFASWIS----APGGGEANGGANSAQTVFQIQPQPAPGAL 1122 TL+ + WADMGI LSP + S+FA W++ + + G AQTVFQIQ PA G Sbjct: 1080 TLAAKTWADMGITLSPTMVSSFARWVAPLGASSAAAGGSAGGADAQTVFQIQALPAGGTT 1139 Query: 1123 EYTIEIDGQQLRYRNTQAQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRFGLERL 1182 EYTIEIDGQQLRYRNTQAQWTNF+WPNPQG GAR+TA T+DGRT+E+A+QPGRFGLERL Sbjct: 1140 EYTIEIDGQQLRYRNTQAQWTNFVWPNPQGVAGARITAVTFDGRTVEIANQPGRFGLERL 1199 Query: 1183 INSAQRKRKDNGVFELSWTNEGVTVVVNLKIISSAEVSGTA-NGPARGTASLRGLKLPET 1241 IN+A RKRKD G FELSWTNE +TV +NLKIISS +VS + +G A+ RG++LPET Sbjct: 1200 INTAVRKRKD-GNFELSWTNENITVPINLKIISSPQVSAKSPDGGAQQGQGFRGMRLPET 1258 Query: 1242 IAGGAPAP 1249 I G A +P Sbjct: 1259 IVGTAASP 1266 >ref|ZP_07677455.1| type VI secretion protein IcmF [Ralstonia sp. 5_7_47FAA] gb|EFP64188.1| type VI secretion protein IcmF [Ralstonia sp. 5_7_47FAA] Length = 1316 Score = 1578 bits (4087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 785/1281 (61%), Positives = 982/1281 (76%), Gaps = 38/1281 (2%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 MQR +FL+++RTL I+G L FL + A T E+ L W + L + L WL +L++RW Sbjct: 1 MQRFLNFLTNSRTLSILGVIVLTIFLLLMAQTFEVGLVWVGIALGVLLALWLLTYLWKRW 60 Query: 61 KVRRAAGKLGEVLEQQATQSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGSAA 120 + R+A+ KL VLEQ AT A+ D +REEV ALR R+ EA+ TIK SKLGQ SGSAA Sbjct: 61 RARQASNKLEGVLEQ-ATADKTATPD--KREEVEALRVRLAEAVKTIKRSKLGQMSGSAA 117 Query: 121 LYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILLDT 180 LYELPWY+VIGNPAAGKSTA+ NSGLQFPFADKGG ++ G+GGTRNCDWFFTT+GILLDT Sbjct: 118 LYELPWYIVIGNPAAGKSTAVLNSGLQFPFADKGGAVIQGIGGTRNCDWFFTTEGILLDT 177 Query: 181 AGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLRQR 240 AGRYSV+EEDR EW FL LLKRYR +APINGI++ VS++ELT NRPEFAINLAKNLRQR Sbjct: 178 AGRYSVHEEDRREWLGFLDLLKRYRPKAPINGIVVTVSVSELTQNRPEFAINLAKNLRQR 237 Query: 241 VQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAYDRKRSGQEVVS 300 VQELTE+LEVFAPVYV+FTKADLITGF EFF D+E+ ERDRVWGATL ++ S +V + Sbjct: 238 VQELTERLEVFAPVYVMFTKADLITGFTEFFGDSEKQERDRVWGATLPFE-PDSKPDVAA 296 Query: 301 FFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFEENPF 360 FD+RFDEL GLKE+S+A +++ R ++PG+L+FPLEF+SIK LR+F+ TLF+ENPF Sbjct: 297 VFDQRFDELCDGLKEISVAQIALHRNNKLSPGLLSFPLEFASIKPTLRAFLMTLFDENPF 356 Query: 361 QFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQ-REIFSQHGFFLHNLFKQV 419 Q+KPVFRGFYFTSA+QEGAT S S++RIA RFGL ++ + RE+FS++GFFL +LF +V Sbjct: 357 QYKPVFRGFYFTSALQEGATNSVSAERIARRFGLSMDGAARPREVFSKNGFFLRDLFSKV 416 Query: 420 IFADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADMDKAV 479 IFADKQ V Q+ S K R+R ATFFA + LGV+LGGW+WSYMGNR L ANVQAD+DK V Sbjct: 417 IFADKQTVRQFASPAKTRLRIATFFALVLALGVMLGGWTWSYMGNRTLTANVQADLDKIV 476 Query: 480 KLQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYFSGIK 539 K+Q+ R+DLQ+R EAL+ILQDRIEQLDRYR PL++ +GLYQGD L+ KL +EY++G++ Sbjct: 477 KMQQNRVDLQARLEALDILQDRIEQLDRYRNDHPLALSLGLYQGDTLQHKLLDEYYNGLR 536 Query: 540 EIMLKPVASNIESYLMEVNANAARLEPMSRPPQSGGITPVADNG---------------- 583 ++MLKPV IE++L EVNA+ +L PM RPP++G + + Sbjct: 537 QVMLKPVGGAIETFLAEVNAHPDQLAPMVRPPETGAVMTTSVTTATATVGGASGASGAAA 596 Query: 584 --------AQAASALRTYKDSSATSVEDAYNALKTYLMLADKSRAESSHLNDQITRFWRG 635 A A++ + Y D+S T+VED YNALKTYLML+DK E +HL DQITRFWRG Sbjct: 597 NAPAAPNQATASTGAKRYTDASPTNVEDGYNALKTYLMLSDKRHVEVAHLTDQITRFWRG 656 Query: 636 WLETNRGTMPREQMIRSAERLISFSLEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPA 695 WLE NR MPREQMIRSAER +SF L ++ND +WP ++ L+LVDQ RENLRRVVRGMPA Sbjct: 657 WLEDNRRNMPREQMIRSAERNLSFFLARVNDDNWPLLEGNLSLVDQTRENLRRVVRGMPA 716 Query: 696 RERVYADVKARAATRFASMTVARIVGDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAA 755 RER YA++KARA+TR+A MTVARIVGD LV GSYA+PGTFT++AW +VQ A KEAA Sbjct: 717 RERAYAEIKARASTRYAPMTVARIVGDTGAGLVAGSYAVPGTFTKEAWLGYVQPAIKEAA 776 Query: 756 NKELQSADWVLKTSAKDDLTLEGSPEQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLD 815 NKELQ+ DWVL +A+DDLTLEGSPEQIQKALVT YKTEYAREWQ+F+QGV+I + + D Sbjct: 777 NKELQTKDWVLNVAARDDLTLEGSPEQIQKALVTMYKTEYAREWQRFMQGVAIQDFSSFD 836 Query: 816 DATNAMNRLGDPITSPMKKVINTVYDETSWDNPSLVDAGLANAKSGFMGWFKETILRRSP 875 A MN LGDP SP++KV++T Y++TSWDNPS+ +AGL AKSG +GWFK+ R++P Sbjct: 837 QAVTGMNLLGDPTNSPIRKVLDTAYEQTSWDNPSMFNAGLKQAKSGVLGWFKQLFARQTP 896 Query: 876 APAPTQFNADGTT---AIPMGPVGREFSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNT 932 + + G AIPMGPVG+EFSG+AR+VV +D + SLL+ Y+D+LSK+RTR N Sbjct: 897 SQVNVNLDVGGNADAGAIPMGPVGKEFSGLARVVVMRD-DKSLLRGYMDSLSKVRTRFNQ 955 Query: 933 IKNQGDTGPGAKQLMQQTLEGNGSELSDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQG 992 IKNQGD GPGA+QLMQQTL+GNGSEL+D+LK+VDE+ML G+ D ++ LRPLLVRPL+Q Sbjct: 956 IKNQGDPGPGARQLMQQTLDGNGSELADTLKYVDEQMLTGMTDSERATLRPLLVRPLLQS 1015 Query: 993 FNALVRPTEGEVNKIWRAQVYEPFQSNLAAKYPFSPNSKIEANSGEIGTVFGENGAISKF 1052 + +RP EVNK+W AQVY+PF + LA KYPF+PN+KIEA++ EIG VFG +GAI+KF Sbjct: 1016 YAVAIRPATTEVNKVWNAQVYQPFATTLADKYPFAPNAKIEASAAEIGQVFGPDGAIAKF 1075 Query: 1053 VTTAMGPLVVRRGDTLSPRKWADMGINLSPAITSNFASWIS----APGGGEANGGANSAQ 1108 +T +GPL VRRGD ++ R W D+GI P T+ F WI+ GG A + Q Sbjct: 1076 ASTTIGPLSVRRGDMIASRTWGDLGIAFVPEFTTGFTRWIAPLTGGAAGGAGGAAAAAPQ 1135 Query: 1109 TVFQIQPQPAPGALEYTIEIDGQQLRYRNTQAQWTNFIWPNPQGTPGARVTAQTYDGRTI 1168 TVFQI P P+ GA EYTIEIDGQQLRYRNT QW NF+WPNPQGTPGARVTA T+DGRT+ Sbjct: 1136 TVFQILPVPSQGATEYTIEIDGQQLRYRNTPPQWANFVWPNPQGTPGARVTATTFDGRTV 1195 Query: 1169 EVASQPGRFGLERLINSAQRKRKDNGVFELSWTNEGVTVVVNLKIISSAEVSGTANGPAR 1228 E+ ++PGRFGLERLI +AQRKR+ +G F+LSWT + +TV ++L+IISS + GT + Sbjct: 1196 ELLNEPGRFGLERLIATAQRKRRPDGAFDLSWTKDNLTVSISLRIISSPQAGGTTASDSP 1255 Query: 1229 GTASLRGLKLPETIAGGAPAP 1249 LRGL+LP +IA A AP Sbjct: 1256 QGQGLRGLRLPTSIA-DASAP 1275 >ref|ZP_06842757.1| type VI secretion protein IcmF [Burkholderia sp. Ch1-1] gb|EFG69716.1| type VI secretion protein IcmF [Burkholderia sp. Ch1-1] Length = 1293 Score = 1571 bits (4067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 763/1259 (60%), Positives = 975/1259 (77%), Gaps = 28/1259 (2%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 M+R + L+ TRTL IIG ALAA LFIGA TL++ L W AV+L + WL W RR Sbjct: 1 MRRFLNVLTHTRTLSIIGLLALAAVLFIGADTLQIDLMWPAVVLGTVVALWLLVWAVRRL 60 Query: 61 KVRRAAGKLGEVLEQQATQSVAA--SSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGS 118 + RRA KLGE+LEQQA + A + A++ E+ LRTR++EA+ TIKTSK+GQ SG Sbjct: 61 RARRANRKLGEMLEQQAEKQTEAGPAPTPARQAELDVLRTRLVEAVKTIKTSKIGQVSGG 120 Query: 119 AALYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILL 178 +ALYELPWY+VIGNPAAGKS+A+ NSGLQFPFADK +VHG+GGTRNCDWFFTT+GILL Sbjct: 121 SALYELPWYIVIGNPAAGKSSAVLNSGLQFPFADKNNAVVHGIGGTRNCDWFFTTEGILL 180 Query: 179 DTAGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLR 238 DTAGRYSV+EEDR EW FLGLLKR+R +APINGII+ SIAELTG++PEFAINLAKNLR Sbjct: 181 DTAGRYSVHEEDRTEWLGFLGLLKRFRPKAPINGIIVTASIAELTGSKPEFAINLAKNLR 240 Query: 239 QRVQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAY--DRKRSGQ 296 QRVQELTEKLEVFAPVYV+FTKADLITGF EFF ++R E DRVWGATL Y D KR Sbjct: 241 QRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSGSDRHEYDRVWGATLPYEPDEKR--- 297 Query: 297 EVVSFFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFE 356 +VV FDE F+ELY GLKE+S+A MS+ RG ++PG L+FPLEFS+IK LR+F+ATLFE Sbjct: 298 DVVGLFDEHFEELYDGLKEISIAQMSISRGNKLSPGQLSFPLEFSTIKPALRAFLATLFE 357 Query: 357 ENPFQFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQ-REIFSQHGFFLHNL 415 NPFQ+KP+FRGFYFTSA+QEG T SA++ RIA+RFGL E P+ FS++GFFL +L Sbjct: 358 TNPFQYKPIFRGFYFTSALQEGETSSAAATRIANRFGLSAESLPKPHSAFSKNGFFLRDL 417 Query: 416 FKQVIFADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADM 475 F +VIFAD+Q V Q+ S K RMRYATFF +A L + LGGW+WS + N+QL ANVQAD+ Sbjct: 418 FSKVIFADRQTVRQFASPAKTRMRYATFFGFVAALALALGGWTWSTVNNQQLTANVQADL 477 Query: 476 DKAVKLQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYF 535 D V+LQ+ R DLQSR +A+++L+DRI+QL+++R +PL+V +GLYQGD LE++L EY+ Sbjct: 478 DNVVRLQQNRNDLQSRLQAMDVLEDRIDQLEQFRRDKPLAVSLGLYQGDRLEQRLLTEYY 537 Query: 536 SGIKEIMLKPVASNIESYLMEVNANAARLEPMSRPPQSGGITPVADNGAQAASALR-TYK 594 +G+++I+L PV+ N+ S+L +VNA+ +L P++R P + I PV+ + A +A++ Y Sbjct: 538 NGVRQILLDPVSQNLASFLKDVNAHPDQLAPLNRAPDAAAI-PVSTHSAMSANSQGGLYS 596 Query: 595 DSSATSVEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETNRGTMPREQMIRSAE 654 D+S T+VEDAYNALKTYLML+DK E++HL DQ+ RFWRGWLETNRG MPR++MIRSAE Sbjct: 597 DASPTNVEDAYNALKTYLMLSDKRHVETAHLTDQVARFWRGWLETNRGNMPRDEMIRSAE 656 Query: 655 RLISFSLEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVYADVKARAATRFASM 714 R+I+F L +++D WP ID L LVDQ RENLRRVVRGMPAR+RVY ++KARA+TRFA M Sbjct: 657 RMITFYLSRVSDDDWPMIDQNLGLVDQTRENLRRVVRGMPARQRVYEEIKARASTRFAPM 716 Query: 715 TVARIVGDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQSADWVLKTSAKDDL 774 T+ARIVG+ + LV GSYAIPGTFTR+AW ++VQ A ++AA KELQ+ DWVL TSA DDL Sbjct: 717 TIARIVGENNTALVAGSYAIPGTFTREAWFQYVQPAIRDAATKELQAKDWVLNTSAHDDL 776 Query: 775 TLEGSPEQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNAMNRLGDPITSPMKK 834 TLEGSPEQIQKALV YKTEYA WQKF+QG+++ + A +AMNRLGDP SP++K Sbjct: 777 TLEGSPEQIQKALVAMYKTEYAMHWQKFMQGIAVQSFGSFGQAVDAMNRLGDPQDSPIRK 836 Query: 835 VINTVYDETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPT-QFNAD-----GTT 888 V+ T YD+TSWDNPSL +A L A++G WFK R APT Q NA+ Sbjct: 837 VLETAYDQTSWDNPSLFNANLKRAQTGVTSWFKNWFSR-----APTGQLNANIDINGNPV 891 Query: 889 AIPMGPVGREFSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDTGPGAKQLMQ 948 +PMGP+G+EFS + R+VVS D NGS+L+ Y+D LSK+RTR N IKNQGD GPGA+QLMQ Sbjct: 892 EMPMGPIGQEFSALGRIVVSGD-NGSMLKGYMDTLSKVRTRFNVIKNQGDPGPGARQLMQ 950 Query: 949 QTLEGNGSELSDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRPTEGEVNKIW 1008 QTL+G+GSEL+DSLK+VDE+ML GL D Q+ LRPLLVRPL+ + +++P EVNK+W Sbjct: 951 QTLDGSGSELADSLKYVDEQMLTGLTDSQRKALRPLLVRPLMAAYAVVIQPASVEVNKVW 1010 Query: 1009 RAQVYEPFQSNLAAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGPLVVRRGDTL 1068 AQVY+ FQ +LA KYPF+ ++K+EA +GEI VFG +GAI++FV T +GPL VRRGDTL Sbjct: 1011 NAQVYQTFQGSLANKYPFASDAKVEAGAGEIAQVFGPDGAIARFVGTTLGPLAVRRGDTL 1070 Query: 1069 SPRKWADMGINLSPAITSNFASWIS---APGGGEANGGANSAQTVFQIQPQPAPGALEYT 1125 + R W DMG+ L+P T+ FA W++ + ++ QTVFQI PQP+ G EYT Sbjct: 1071 TARTWGDMGLALTPDFTNGFARWVAPLAGGAASASAQSSSEPQTVFQILPQPSSGTTEYT 1130 Query: 1126 IEIDGQQLRYRNTQAQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRFGLERLINS 1185 + IDGQQ+RYRNT QWTNF+WPNP G+PGA ++A T+DGRT+++ ++PGR+GLE+LINS Sbjct: 1131 LAIDGQQMRYRNTPPQWTNFVWPNPSGSPGATLSATTFDGRTLQLVNEPGRYGLEKLINS 1190 Query: 1186 AQRKRKDNGVFELSWTNEGVTVVVNLKIISSAEV-SGTANGPARGTASLRGLKLPETIA 1243 AQRKR+ +G F+LSWT VTV V+++IIS+++ SGT++ P + SLRGL+LP ++A Sbjct: 1191 AQRKRRPDGTFDLSWTQGSVTVAVSMRIISTSQASSGTSDAPQQ--QSLRGLRLPSSVA 1247 >ref|YP_001888657.1| type VI secretion protein IcmF [Burkholderia phytofirmans PsJN] gb|ACD19287.1| type VI secretion protein IcmF [Burkholderia phytofirmans PsJN] Length = 1288 Score = 1559 bits (4037), Expect = 0.0, Method: Compositional matrix adjust. Identities = 765/1259 (60%), Positives = 976/1259 (77%), Gaps = 27/1259 (2%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 M+R+ + L+ TRTL IIG ALAA LFIGA TL++ L W A++L + WL W+ RR Sbjct: 1 MRRILNVLTHTRTLSIIGLLALAAVLFIGADTLQIDLMWPAIVLGAVIALWLLVWIVRRL 60 Query: 61 KVRRAAGKLGEVLEQQATQSVAA--SSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGS 118 + RRA KLGE+LEQQA + A + A++ E+ LRTR+++A+ TIKTSK+GQ SG Sbjct: 61 RARRANRKLGEMLEQQAEKQAEAGPAPTPARQAELDVLRTRLVDAVKTIKTSKIGQVSGG 120 Query: 119 AALYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILL 178 +ALYELPWY+VIGNPAAGKS+A+ NSGLQFPFADK ++HG+GGTRNCDWFFTT+GILL Sbjct: 121 SALYELPWYIVIGNPAAGKSSAVLNSGLQFPFADKNNAVIHGIGGTRNCDWFFTTEGILL 180 Query: 179 DTAGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLR 238 DTAGRYSV+EEDR EW FLGLLKR+R +APINGII+ SIAELT ++PEFAINLAKNLR Sbjct: 181 DTAGRYSVHEEDRTEWLGFLGLLKRFRPKAPINGIIVTASIAELTSSKPEFAINLAKNLR 240 Query: 239 QRVQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAY--DRKRSGQ 296 QRVQELTEKLEVFAPVYV+FTKADLITGF EFF +ER E DRVWGATL Y D KR Sbjct: 241 QRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSGSERHEYDRVWGATLPYEPDEKR--- 297 Query: 297 EVVSFFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFE 356 +VV FDE F+ELY GLKE+S+A MS+ RG ++PG L+FPLEFS+IK LR+F+ATLFE Sbjct: 298 DVVGLFDEHFEELYDGLKEISVAQMSINRGNKLSPGQLSFPLEFSTIKPALRAFLATLFE 357 Query: 357 ENPFQFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQ-REIFSQHGFFLHNL 415 NPFQ+KP+FRGFYFTSA+QEG T SA++ RIA+RFGL + P+ FS++GFFL +L Sbjct: 358 TNPFQYKPIFRGFYFTSALQEGETNSAAATRIANRFGLSSDGLPKPHSAFSKNGFFLRDL 417 Query: 416 FKQVIFADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADM 475 F +VIFAD+Q V Q+ S K RMRYATFF +A+L + LGGW+WS + N+QL ANVQAD+ Sbjct: 418 FSKVIFADRQTVKQFASPAKTRMRYATFFGFVAVLALALGGWTWSTVNNQQLTANVQADL 477 Query: 476 DKAVKLQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYF 535 D V+LQ+ R DLQSR +A+++L+DRI+QL+++R RPL+V +GLYQGD LE++L EY+ Sbjct: 478 DNVVRLQQNRNDLQSRLQAMDVLEDRIDQLEQFRRDRPLAVSLGLYQGDRLEQRLLTEYY 537 Query: 536 SGIKEIMLKPVASNIESYLMEVNANAARLEPMSRPPQSGGITPVADNGAQAASALR-TYK 594 +G+++I+L PV+ N+ S+L +VNA+ +L P++R P + I PV+ + A +A++ Y Sbjct: 538 NGVRQILLDPVSQNLASFLKDVNAHPDQLVPLNRAPDAAAI-PVSTHSAMSANSQGGLYS 596 Query: 595 DSSATSVEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETNRGTMPREQMIRSAE 654 D+S T+VEDAYNALKTYLML+DK E++HL DQ+ RFWRGWLETNRG MPR++MIRSAE Sbjct: 597 DASPTNVEDAYNALKTYLMLSDKRHVETAHLTDQVARFWRGWLETNRGNMPRDEMIRSAE 656 Query: 655 RLISFSLEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVYADVKARAATRFASM 714 R+I+F L +++D WP ID L LVDQ RENLRRVVRGMPAR+RVY ++KARA+TRFA M Sbjct: 657 RMITFYLARVSDDDWPMIDQNLGLVDQTRENLRRVVRGMPARQRVYEEIKARASTRFAPM 716 Query: 715 TVARIVGDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQSADWVLKTSAKDDL 774 TVARIVG+ + LV GSYAIPGTFTR+AW ++VQ A ++AA KELQ+ DWVL TSA DDL Sbjct: 717 TVARIVGENNTALVAGSYAIPGTFTREAWFQYVQPAIRDAATKELQAKDWVLNTSAHDDL 776 Query: 775 TLEGSPEQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNAMNRLGDPITSPMKK 834 TLEGSPEQIQKALV YKTEYA WQKF+QG+++ + A +AMNRLGDP SP++K Sbjct: 777 TLEGSPEQIQKALVAMYKTEYAMHWQKFMQGIAVQSFGSFGQAVDAMNRLGDPQDSPIRK 836 Query: 835 VINTVYDETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPT-QFNAD-----GTT 888 V+ T YD+TSWDNPSL +A L A++G W K R APT Q NA+ Sbjct: 837 VLETAYDQTSWDNPSLFNANLKRAQTGVTSWVKNLFSR-----APTGQINANIDINGNPV 891 Query: 889 AIPMGPVGREFSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDTGPGAKQLMQ 948 +PMGP+G+EFS + R+VVS D NGS+L+ Y+D LSK+RTR N IKNQGD GPGA+QLMQ Sbjct: 892 EVPMGPIGQEFSALGRIVVSGD-NGSMLKGYMDTLSKVRTRFNVIKNQGDPGPGARQLMQ 950 Query: 949 QTLEGNGSELSDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRPTEGEVNKIW 1008 QTL+G+GSEL+DSLK+VDE+ML GL D Q+ LRPLLVRPL+ + +++P EVNK+W Sbjct: 951 QTLDGSGSELADSLKYVDEQMLTGLTDSQRKALRPLLVRPLMAAYAVVIQPASVEVNKVW 1010 Query: 1009 RAQVYEPFQSNLAAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGPLVVRRGDTL 1068 AQVY+ FQ++LA KYPF+ ++K+EA +GEI VFG +GAI+KFV T +GPL VRRGDTL Sbjct: 1011 NAQVYQSFQNSLANKYPFASDAKVEAGAGEIAQVFGPDGAIAKFVGTTLGPLAVRRGDTL 1070 Query: 1069 SPRKWADMGINLSPAITSNFASWISAPGGGEANGGANSA----QTVFQIQPQPAPGALEY 1124 + R W DMG+ L+P TS FA W++ GG A A QTVFQI PQP+ G EY Sbjct: 1071 TARTWGDMGLALTPDFTSGFARWVAPLAGGAAGATAGQGSAEPQTVFQILPQPSSGTTEY 1130 Query: 1125 TIEIDGQQLRYRNTQAQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRFGLERLIN 1184 T+ IDGQQ+RYRNT QWTNF+WPNP G+PGA ++A T+DGRT+++ ++PGR+GLE+LIN Sbjct: 1131 TLAIDGQQMRYRNTPPQWTNFVWPNPSGSPGATLSATTFDGRTLQLVNEPGRYGLEKLIN 1190 Query: 1185 SAQRKRKDNGVFELSWTNEGVTVVVNLKIISSAEVSGTANGPARGTASLRGLKLPETIA 1243 SAQRKR+ +G F+LSWT GVTV V+++IIS+++ S ++ A SLRGL+LP ++A Sbjct: 1191 SAQRKRRPDGTFDLSWTQGGVTVAVSMRIISTSQASSGSSD-APQQQSLRGLRLPSSVA 1248 >ref|ZP_04968136.1| conserved hypothetical protein [Burkholderia pseudomallei 406e] gb|EDO87663.1| conserved hypothetical protein [Burkholderia pseudomallei 406e] Length = 1297 Score = 1559 bits (4036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 774/1297 (59%), Positives = 990/1297 (76%), Gaps = 38/1297 (2%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 MQR + L+ RTL I+GFAALAA LFI A L++ L WAAV L +AL WL L+RRW Sbjct: 1 MQRFLNVLTHPRTLTILGFAALAAVLFIAADALQIGLAWAAVALGVALALWLATKLWRRW 60 Query: 61 KVRRAAGKLGEVLEQQAT--QSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGS 118 +VRRA +LG++LEQQA + AA ++ A+R E+ LRTR+ + + TIKTSK+GQ SG Sbjct: 61 RVRRANRQLGDMLEQQAETGKMSAAVAEPAKRAELDVLRTRLADTVKTIKTSKIGQVSGG 120 Query: 119 AALYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILL 178 +ALYELPWY+VIGNPAAGKS+A+ NSGLQFPFADK ++HG+GGTRNCDWFFTT+GILL Sbjct: 121 SALYELPWYIVIGNPAAGKSSAVINSGLQFPFADKNSAVIHGIGGTRNCDWFFTTEGILL 180 Query: 179 DTAGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLR 238 DTAGRYSV+EEDR+EW FL LLKRYR +APINGII+ SIAELTGNRPEFAINLAKNLR Sbjct: 181 DTAGRYSVHEEDRSEWLGFLDLLKRYRPKAPINGIIVTASIAELTGNRPEFAINLAKNLR 240 Query: 239 QRVQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAY--DRKRSGQ 296 QRVQELTEKLEVFAPVYV+FTKADLITGF EFF +R E DRVWGATL Y D KR Sbjct: 241 QRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSSNDRQEYDRVWGATLPYEPDEKR--- 297 Query: 297 EVVSFFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFE 356 +VV+ FD+RF+ELY GLKE+S+A +SV RG ++PG L+FPLEFS+IK LRSF+ATLFE Sbjct: 298 DVVALFDQRFEELYDGLKEISVAQLSVSRGNKLSPGQLSFPLEFSTIKPALRSFLATLFE 357 Query: 357 ENPFQFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQ-REIFSQHGFFLHNL 415 +NPFQ+KP+FRGFYFTSA+QEG T SA++QRIA RFGL + P+ FS++GFFL +L Sbjct: 358 DNPFQYKPIFRGFYFTSALQEGETNSAAAQRIAHRFGLDSQSLPKPHSAFSKNGFFLRDL 417 Query: 416 FKQVIFADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADM 475 F +VIFAD+Q V Q+ S TK R+RYATFF +A L + LGGW+WS +GN+QL++NVQAD+ Sbjct: 418 FSKVIFADRQTVRQFASPTKTRVRYATFFGFVAALALALGGWTWSTIGNQQLVSNVQADL 477 Query: 476 DKAVKLQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYF 535 D +LQ+ R DLQSR +A++IL+DRIEQL+++R +PLSV +GLYQG+ LE+ L EY+ Sbjct: 478 DNVTRLQQNRNDLQSRLQAMDILEDRIEQLEQFRRDKPLSVSLGLYQGNRLEQHLLTEYY 537 Query: 536 SGIKEIMLKPVASNIESYLMEVNANAARLEPMSRPPQSG----GITPVADNGAQAASALR 591 +G+++I+L PV+ N+ S+L +VNA+ +L PM+R P+SG G PV+ + A +A Sbjct: 538 NGVRQILLAPVSDNLASFLKDVNAHPDQLAPMTRAPESGATPAGPMPVSTHPAAPGAAPS 597 Query: 592 T-----------YKDSSATSVEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETN 640 Y D+S T+VEDAYNALKTYLML+DK E +HL DQ+ RFWRGWLETN Sbjct: 598 PAVAQGRQQGGLYNDASPTNVEDAYNALKTYLMLSDKRHVEQAHLTDQVARFWRGWLETN 657 Query: 641 RGTMPREQMIRSAERLISFSLEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVY 700 RG MPR++MIRSAER+I+F L +++D WP I+ L LVDQ RENLRRVVRGMPAR+RVY Sbjct: 658 RGNMPRDEMIRSAERMITFYLSRVSDNDWPMIEANLALVDQTRENLRRVVRGMPARQRVY 717 Query: 701 ADVKARAATRFASMTVARIVGDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQ 760 ++KARA+TRFA MT+ARIVG+ + LV GSYAIPGTFTRDAW ++VQ A ++AA KELQ Sbjct: 718 EEIKARASTRFAPMTIARIVGEGNTGLVAGSYAIPGTFTRDAWFQYVQPAIRDAATKELQ 777 Query: 761 SADWVLKTSAKDDLTLEGSPEQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNA 820 + DWVL T++ DDLTLEGSPEQIQK LV YKTEYA+ WQKF+QG+++ N A +A Sbjct: 778 AKDWVLNTASADDLTLEGSPEQIQKTLVAMYKTEYAQHWQKFMQGIAVQGFGNFTQAVDA 837 Query: 821 MNRLGDPITSPMKKVINTVYDETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPT 880 MN+LGDP SP++KV+ T YD+TSWDNPSL +A + A++G + W K+ R+ Sbjct: 838 MNKLGDPQDSPIRKVLETAYDQTSWDNPSLANATIKKAQTGVVNWVKQWFTRQPGGQIAA 897 Query: 881 QFNADGTTA-IPMGPVGREFSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDT 939 + +G A +PMGP+G+EF G+ R+V + D S+L+ Y+D LSK+RTR N IKNQGD Sbjct: 898 NVDINGNPADVPMGPIGQEFVGLGRIVATHDGT-SMLKGYMDTLSKVRTRFNVIKNQGDP 956 Query: 940 GPGAKQLMQQTLEGNGSELSDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRP 999 GPGA+QLMQQTL+GNGSEL+DSLKFVDE+ML GL D Q+ LRPLLVRPL+Q F +++P Sbjct: 957 GPGARQLMQQTLDGNGSELADSLKFVDEQMLTGLTDSQRKSLRPLLVRPLMQAFAVVIQP 1016 Query: 1000 TEGEVNKIWRAQVYEPFQSNLAAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGP 1059 EVNK+W AQVY+PFQ++LA KYPF+ +K+EA +GEI VFG +G+I+KFV T +GP Sbjct: 1017 ASVEVNKVWNAQVYQPFQNSLANKYPFAAGAKVEAGAGEIAQVFGPDGSIAKFVGTTLGP 1076 Query: 1060 LVVRRGDTLSPRKWADMGINLSPAITSNFASWIS--APGGGEANGGANSAQTVFQIQPQP 1117 L VRRGDTLS R W DMG+ L+P T FA W++ A G + ++ QTVFQ+ PQP Sbjct: 1077 LAVRRGDTLSARTWGDMGLALTPDFTGGFARWVAPLAGGAATSAAASSEPQTVFQVLPQP 1136 Query: 1118 APGALEYTIEIDGQQLRYRNTQAQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRF 1177 + G EYTI IDGQQLRYRNT QWTNF+WPNPQG+PGA ++A T+DGRT+++ ++PGR+ Sbjct: 1137 SSGTTEYTIAIDGQQLRYRNTPPQWTNFVWPNPQGSPGATLSATTFDGRTLQLVNEPGRY 1196 Query: 1178 GLERLINSAQRKRKDNGVFELSWTNEGVTVVVNLKIISSAEVSGTANGPARGTASLRGLK 1237 GLE+LINSAQRKR+ +G F+L+WT V+V V ++IIS+++ +G + P + SLRGL+ Sbjct: 1197 GLEKLINSAQRKRRPDGTFDLTWTQGSVSVSVTMRIISTSQPTGGGDQPQQ--QSLRGLR 1254 Query: 1238 LPETIAGGAPAPTPAGAAPMQPMQPAQPMATDAAAPQ 1274 LP ++A + AG A QP + AAAPQ Sbjct: 1255 LPSSVADAS-----AGGAANATAQP----GSGAAAPQ 1282 >ref|ZP_02413185.1| hypothetical protein Bpse14_20270 [Burkholderia pseudomallei 14] Length = 1297 Score = 1558 bits (4035), Expect = 0.0, Method: Compositional matrix adjust. Identities = 774/1297 (59%), Positives = 990/1297 (76%), Gaps = 38/1297 (2%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 MQR + L+ RTL I+GFAALAA LFI A L++ L WAAV L +AL WL L+RRW Sbjct: 1 MQRFLNVLTHPRTLTIVGFAALAAVLFIAADALQIGLVWAAVALGVALALWLATKLWRRW 60 Query: 61 KVRRAAGKLGEVLEQQAT--QSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGS 118 +VRRA +LG++LEQQA + AA ++ A+R E+ LRTR+ + + TIKTSK+GQ SG Sbjct: 61 RVRRANRQLGDMLEQQAETGKMSAAVAEPAKRAELDVLRTRLADTVKTIKTSKIGQVSGG 120 Query: 119 AALYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILL 178 +ALYELPWY+VIGNPAAGKS+A+ NSGLQFPFADK ++HG+GGTRNCDWFFTT+GILL Sbjct: 121 SALYELPWYIVIGNPAAGKSSAVINSGLQFPFADKNSAVIHGIGGTRNCDWFFTTEGILL 180 Query: 179 DTAGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLR 238 DTAGRYSV+EEDR+EW FL LLKRYR +APINGII+ SIAELTGNRPEFAINLAKNLR Sbjct: 181 DTAGRYSVHEEDRSEWLGFLDLLKRYRPKAPINGIIVTASIAELTGNRPEFAINLAKNLR 240 Query: 239 QRVQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAY--DRKRSGQ 296 QRVQELTEKLEVFAPVYV+FTKADLITGF EFF +R E DRVWGATL Y D KR Sbjct: 241 QRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSSNDRQEYDRVWGATLPYEPDEKR--- 297 Query: 297 EVVSFFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFE 356 +VV+ FD+RF+ELY GLKE+S+A +SV RG ++PG L+FPLEFS+IK LRSF+ATLFE Sbjct: 298 DVVALFDQRFEELYDGLKEISVAQLSVSRGNKLSPGQLSFPLEFSTIKPALRSFLATLFE 357 Query: 357 ENPFQFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQ-REIFSQHGFFLHNL 415 +NPFQ+KP+FRGFYFTSA+QEG T SA++QRIA RFGL + P+ FS++GFFL +L Sbjct: 358 DNPFQYKPIFRGFYFTSALQEGETNSAAAQRIAHRFGLDSQSLPKPHSAFSKNGFFLRDL 417 Query: 416 FKQVIFADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADM 475 F +VIFAD+Q V Q+ S TK R+RYATFF +A L + LGGW+WS +GN+QL++NVQAD+ Sbjct: 418 FSKVIFADRQTVRQFASPTKTRVRYATFFGFVAALALALGGWTWSTIGNQQLVSNVQADL 477 Query: 476 DKAVKLQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYF 535 D +LQ+ R DLQSR +A++IL+DRIEQL+++R +PLSV +GLYQG+ LE+ L EY+ Sbjct: 478 DNVTRLQQNRNDLQSRLQAMDILEDRIEQLEQFRRDKPLSVSLGLYQGNRLEQHLLTEYY 537 Query: 536 SGIKEIMLKPVASNIESYLMEVNANAARLEPMSRPPQSG----GITPVADNGAQAASALR 591 +G+++I+L PV+ N+ S+L +VNA+ +L PM+R P+SG G PV+ + A +A Sbjct: 538 NGVRQILLAPVSDNLASFLKDVNAHPDQLAPMTRAPESGATPAGPMPVSTHPAAPGAAPS 597 Query: 592 T-----------YKDSSATSVEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETN 640 Y D+S T+VEDAYNALKTYLML+DK E +HL DQ+ RFWRGWLETN Sbjct: 598 PAVAQGRQQGGLYNDASPTNVEDAYNALKTYLMLSDKRHVEQAHLTDQVARFWRGWLETN 657 Query: 641 RGTMPREQMIRSAERLISFSLEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVY 700 RG MPR++MIRSAER+I+F L +++D WP I+ L LVDQ RENLRRVVRGMPAR+RVY Sbjct: 658 RGNMPRDEMIRSAERMITFYLSRVSDNDWPMIEANLALVDQTRENLRRVVRGMPARQRVY 717 Query: 701 ADVKARAATRFASMTVARIVGDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQ 760 ++KARA+TRFA MT+ARIVG+ + LV GSYAIPGTFTRDAW ++VQ A ++AA KELQ Sbjct: 718 EEIKARASTRFAPMTIARIVGEGNTGLVAGSYAIPGTFTRDAWFQYVQPAIRDAATKELQ 777 Query: 761 SADWVLKTSAKDDLTLEGSPEQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNA 820 + DWVL T++ DDLTLEGSPEQIQK LV YKTEYA+ WQKF+QG+++ N A +A Sbjct: 778 AKDWVLNTASADDLTLEGSPEQIQKTLVAMYKTEYAQHWQKFMQGIAVQGFGNFTQAVDA 837 Query: 821 MNRLGDPITSPMKKVINTVYDETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPT 880 MN+LGDP SP++KV+ T YD+TSWDNPSL +A + A++G + W K+ R+ Sbjct: 838 MNKLGDPQDSPIRKVLETAYDQTSWDNPSLANATIKKAQTGVVNWVKQWFTRQPGGQIAA 897 Query: 881 QFNADGTTA-IPMGPVGREFSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDT 939 + +G A +PMGP+G+EF G+ R+V + D S+L+ Y+D LSK+RTR N IKNQGD Sbjct: 898 NVDINGNPADVPMGPIGQEFVGLGRIVATHDGT-SMLKGYMDTLSKVRTRFNVIKNQGDP 956 Query: 940 GPGAKQLMQQTLEGNGSELSDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRP 999 GPGA+QLMQQTL+GNGSEL+DSLKFVDE+ML GL D Q+ LRPLLVRPL+Q F +++P Sbjct: 957 GPGARQLMQQTLDGNGSELADSLKFVDEQMLTGLTDSQRKSLRPLLVRPLMQAFAVVIQP 1016 Query: 1000 TEGEVNKIWRAQVYEPFQSNLAAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGP 1059 EVNK+W AQVY+PFQ++LA KYPF+ +K+EA +GEI VFG +G+I+KFV T +GP Sbjct: 1017 ASVEVNKVWNAQVYQPFQNSLANKYPFAAGAKVEAGAGEIAQVFGPDGSIAKFVGTTLGP 1076 Query: 1060 LVVRRGDTLSPRKWADMGINLSPAITSNFASWIS--APGGGEANGGANSAQTVFQIQPQP 1117 L VRRGDTLS R W DMG+ L+P T FA W++ A G + ++ QTVFQ+ PQP Sbjct: 1077 LAVRRGDTLSARTWGDMGLALTPDFTGGFARWVAPLAGGAATSAAASSEPQTVFQVLPQP 1136 Query: 1118 APGALEYTIEIDGQQLRYRNTQAQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRF 1177 + G EYTI IDGQQLRYRNT QWTNF+WPNPQG+PGA ++A T+DGRT+++ ++PGR+ Sbjct: 1137 SSGTTEYTIAIDGQQLRYRNTPPQWTNFVWPNPQGSPGATLSATTFDGRTLQLVNEPGRY 1196 Query: 1178 GLERLINSAQRKRKDNGVFELSWTNEGVTVVVNLKIISSAEVSGTANGPARGTASLRGLK 1237 GLE+LINSAQRKR+ +G F+L+WT V+V V ++IIS+++ +G + P + SLRGL+ Sbjct: 1197 GLEKLINSAQRKRRPDGTFDLTWTQGSVSVSVTMRIISTSQPTGGGDQPQQ--QSLRGLR 1254 Query: 1238 LPETIAGGAPAPTPAGAAPMQPMQPAQPMATDAAAPQ 1274 LP ++A + AG A QP + AAAPQ Sbjct: 1255 LPSSVADAS-----AGGAANATAQP----GSGAAAPQ 1282 >ref|ZP_04887054.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] gb|EDU08038.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] Length = 1297 Score = 1558 bits (4033), Expect = 0.0, Method: Compositional matrix adjust. Identities = 770/1285 (59%), Positives = 983/1285 (76%), Gaps = 34/1285 (2%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 MQR + L+ RTL I+GFAALAA LFI A L++ L WAAV L +AL WL L+RRW Sbjct: 1 MQRFLNVLTHPRTLTIVGFAALAAVLFIAADALQIGLVWAAVALGVALALWLATKLWRRW 60 Query: 61 KVRRAAGKLGEVLEQQAT--QSVAASSDGAQREEVAALRTRMLEAINTIKTSKLGQKSGS 118 +VRRA +LG++LEQQA + AA ++ A+R E+ LRTR+ + + TIKTSK+GQ SG Sbjct: 61 RVRRANRQLGDMLEQQAETGKMSAAVAEPAKRAELDVLRTRLADTVKTIKTSKIGQVSGG 120 Query: 119 AALYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGILL 178 +ALYELPWY+VIGNPAAGKS+A+ NSGLQFPFADK ++HG+GGTRNCDWFFTT+GILL Sbjct: 121 SALYELPWYIVIGNPAAGKSSAVINSGLQFPFADKNSAVIHGIGGTRNCDWFFTTEGILL 180 Query: 179 DTAGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNLR 238 DTAGRYSV+EEDR+EW FL LLKRYR +APINGII+ SIAELTGNRPEFAINLAKNLR Sbjct: 181 DTAGRYSVHEEDRSEWLGFLDLLKRYRPKAPINGIIVTASIAELTGNRPEFAINLAKNLR 240 Query: 239 QRVQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAY--DRKRSGQ 296 QRVQELTEKLEVFAPVYV+FTKADLITGF EFF +R E DRVWGATL Y D KR Sbjct: 241 QRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSSNDRQEYDRVWGATLPYEPDEKR--- 297 Query: 297 EVVSFFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLFE 356 +VV+ FD+RF+ELY GLKE+S+A +SV RG ++PG L+FPLEFS+IK LRSF+ATLFE Sbjct: 298 DVVALFDQRFEELYDGLKEISVAQLSVSRGNKLSPGQLSFPLEFSTIKPALRSFLATLFE 357 Query: 357 ENPFQFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQ-REIFSQHGFFLHNL 415 +NPFQ+KP+FRGFYFTSA+QEG T SA++QRIA RFGL + P+ FS++GFFL +L Sbjct: 358 DNPFQYKPIFRGFYFTSALQEGETNSAAAQRIAHRFGLDSQSLPKPHSAFSKNGFFLRDL 417 Query: 416 FKQVIFADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQADM 475 F +VIFAD+Q V Q+ S TK RMRYATFF +A L + LGGW+WS +GN+QL++NVQAD+ Sbjct: 418 FSKVIFADRQTVRQFASPTKTRMRYATFFGFVAALALALGGWTWSTIGNQQLVSNVQADL 477 Query: 476 DKAVKLQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEYF 535 D +LQ+ R DLQSR +A++IL+DRIEQL+++R +PLSV +GLYQG+ LE+ L EY+ Sbjct: 478 DNVTRLQQNRNDLQSRLQAMDILEDRIEQLEQFRRDKPLSVSLGLYQGNRLEQHLLTEYY 537 Query: 536 SGIKEIMLKPVASNIESYLMEVNANAARLEPMSRPPQSG----GITPVADNG-------- 583 +G+++I+L PV+ N+ S+L +VNA+ +L PM+R P+SG G PV+ + Sbjct: 538 NGVRQILLAPVSDNLASFLKDVNAHPDQLAPMTRAPESGATPAGPMPVSTHPAAPGAAPS 597 Query: 584 ---AQAASALRTYKDSSATSVEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETN 640 AQ Y D+S T+VEDAYNALKTYLML+DK E +HL DQ+ RFWRGWLETN Sbjct: 598 PVVAQGRQQGGLYNDASPTNVEDAYNALKTYLMLSDKRHVEQAHLTDQVARFWRGWLETN 657 Query: 641 RGTMPREQMIRSAERLISFSLEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVY 700 RG MPR++MIRSAER+I+F L +++D WP I+ L LVDQ RENLRRVVRGMPAR+RVY Sbjct: 658 RGNMPRDEMIRSAERMITFYLSRVSDNDWPMIEANLALVDQTRENLRRVVRGMPARQRVY 717 Query: 701 ADVKARAATRFASMTVARIVGDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQ 760 ++KARA+TRFA MT+ARIVG+ + LV GSYAIPGTFTRDAW ++VQ A ++AA KELQ Sbjct: 718 EEIKARASTRFAPMTIARIVGEGNTGLVAGSYAIPGTFTRDAWFQYVQPAIRDAATKELQ 777 Query: 761 SADWVLKTSAKDDLTLEGSPEQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNA 820 + DWVL T++ DDLTLEGSPEQIQK LV YKTEYA+ WQKF+QG+++ N A +A Sbjct: 778 AKDWVLNTASADDLTLEGSPEQIQKTLVAMYKTEYAQHWQKFMQGIAVQGFGNFTQAVDA 837 Query: 821 MNRLGDPITSPMKKVINTVYDETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPT 880 MN+LGDP SP++KV+ T YD+TSWDNPSL +A + A++G + W K+ R+ Sbjct: 838 MNKLGDPQDSPIRKVLETAYDQTSWDNPSLANATIKKAQTGVVNWVKQWFTRQPGGQIAA 897 Query: 881 QFNADGTTA-IPMGPVGREFSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDT 939 + +G A +PMGP+G+EF G+ R+V + D S+L+ Y+D LSK+RTR N IKNQGD Sbjct: 898 NVDINGNPADVPMGPIGQEFVGLGRIVATHDGT-SMLKGYMDTLSKVRTRFNVIKNQGDP 956 Query: 940 GPGAKQLMQQTLEGNGSELSDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRP 999 GPGA+QLMQQTL+GNGSEL+DSLKFVDE+ML GL D Q+ LRPLLVRPL+Q F +++P Sbjct: 957 GPGARQLMQQTLDGNGSELADSLKFVDEQMLTGLTDSQRKSLRPLLVRPLMQAFAVVIQP 1016 Query: 1000 TEGEVNKIWRAQVYEPFQSNLAAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGP 1059 EVNK+W AQVY+PFQ++LA KYPF+ +K+EA +GEI VFG +G+I+KFV T +GP Sbjct: 1017 ASVEVNKVWNAQVYQPFQNSLANKYPFAAGAKVEAGAGEIAQVFGPDGSIAKFVGTTLGP 1076 Query: 1060 LVVRRGDTLSPRKWADMGINLSPAITSNFASWIS--APGGGEANGGANSAQTVFQIQPQP 1117 L VRRGDTLS R W DMG+ L+P T FA W++ A G + ++ QTVFQ+ PQP Sbjct: 1077 LAVRRGDTLSARTWGDMGLALTPDFTGGFARWVAPLAGGAATSAAASSEPQTVFQVLPQP 1136 Query: 1118 APGALEYTIEIDGQQLRYRNTQAQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRF 1177 + G EYTI IDGQQLRYRNT QWTNF+WPNPQG+PGA ++A T+DGRT+++ ++PGR+ Sbjct: 1137 SSGTTEYTIAIDGQQLRYRNTPPQWTNFVWPNPQGSPGATLSATTFDGRTLQLVNEPGRY 1196 Query: 1178 GLERLINSAQRKRKDNGVFELSWTNEGVTVVVNLKIISSAEVSGTANGPARGTASLRGLK 1237 GLE+LINSAQRKR+ +G F+L+WT V+V V ++IIS+++ +G + P + SLRGL+ Sbjct: 1197 GLEKLINSAQRKRRPDGTFDLTWTQGSVSVSVTMRIISTSQPTGGGDQPQQ--QSLRGLR 1254 Query: 1238 LPETIAGGAPAPTPAGAAPMQPMQP 1262 LP ++A + AG A QP Sbjct: 1255 LPSSVADAS-----AGGAANATAQP 1274 >ref|ZP_02887539.1| type VI secretion protein IcmF [Burkholderia graminis C4D1M] gb|EDT06872.1| type VI secretion protein IcmF [Burkholderia graminis C4D1M] Length = 1292 Score = 1557 bits (4032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 760/1260 (60%), Positives = 970/1260 (76%), Gaps = 28/1260 (2%) Query: 1 MQRLWHFLSDTRTLVIIGFAALAAFLFIGASTLELALTWAAVILAIALLCWLGYWLYRRW 60 M+R + L+ RTL IIG ALAA LF+GA TL++ L W A+ L + WL W RR Sbjct: 1 MRRFLNVLTHPRTLSIIGLLALAAVLFVGADTLQIDLMWPAIALGAVVALWLLVWAVRRL 60 Query: 61 KVRRAAGKLGEVLEQQA-TQSVAA--SSDGAQREEVAALRTRMLEAINTIKTSKLGQKSG 117 + RRA KLGE+LEQQA QSV A + A++ E+ LRTR+++A+ TIKTSK+GQ SG Sbjct: 61 RARRANNKLGEMLEQQAEKQSVEAGPAPTPARQAELDVLRTRLVDAVKTIKTSKIGQVSG 120 Query: 118 SAALYELPWYMVIGNPAAGKSTAIANSGLQFPFADKGGKIVHGVGGTRNCDWFFTTDGIL 177 +ALYELPWY+VIGNPAAGKS+A+ NSGLQFPFADK ++HG+GGTRNCDWFFTT+GIL Sbjct: 121 GSALYELPWYIVIGNPAAGKSSAVLNSGLQFPFADKNSAVIHGIGGTRNCDWFFTTEGIL 180 Query: 178 LDTAGRYSVYEEDRNEWFSFLGLLKRYRKQAPINGIIIAVSIAELTGNRPEFAINLAKNL 237 LDTAGRYSV+EEDR EW FLGLLKR+R +APINGII+ SIAELT ++PEFAINLAKNL Sbjct: 181 LDTAGRYSVHEEDRTEWLGFLGLLKRFRPKAPINGIIVTASIAELTSSKPEFAINLAKNL 240 Query: 238 RQRVQELTEKLEVFAPVYVVFTKADLITGFNEFFLDTERSERDRVWGATLAY--DRKRSG 295 RQRVQELTEKLEVFAPVYV+FTKADLITGF EFF +ER E DRVWGATL Y D KR Sbjct: 241 RQRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSGSERHEYDRVWGATLPYEPDEKR-- 298 Query: 296 QEVVSFFDERFDELYAGLKEMSLASMSVKRGENMAPGVLTFPLEFSSIKGVLRSFVATLF 355 +VV FDE F+ELY GLKE+S+A MS+ RG ++PG L+FPLEFS+IK LR+F+ATLF Sbjct: 299 -DVVGLFDEHFEELYDGLKEISVAQMSINRGNKLSPGQLSFPLEFSTIKPALRAFLATLF 357 Query: 356 EENPFQFKPVFRGFYFTSAVQEGATVSASSQRIADRFGLGLEHKPQ-REIFSQHGFFLHN 414 E NPFQ+KP+FRGFYFTSA+QEG T SA++ RIA+RFGL + P+ FS++GFFL + Sbjct: 358 ETNPFQYKPIFRGFYFTSALQEGETNSAAATRIANRFGLSADSMPKPHSAFSKNGFFLRD 417 Query: 415 LFKQVIFADKQLVAQYTSRTKIRMRYATFFAAIAILGVLLGGWSWSYMGNRQLLANVQAD 474 LF +VIFAD+Q V Q+ S K RMRYATFF +A+L + LGGW+WS + N+QL NV+AD Sbjct: 418 LFSKVIFADRQTVRQFASPAKTRMRYATFFGFVAVLALALGGWTWSTINNQQLAENVKAD 477 Query: 475 MDKAVKLQEKRLDLQSRFEALEILQDRIEQLDRYRASRPLSVGMGLYQGDLLERKLREEY 534 +D V+LQ+ R DLQSR +A+++L+DRI+QL+++R +PL+V GLYQGD LE++L EY Sbjct: 478 LDNVVRLQQNRNDLQSRLQAMDVLEDRIDQLEQFRRDKPLAVSFGLYQGDRLEQRLLTEY 537 Query: 535 FSGIKEIMLKPVASNIESYLMEVNANAARLEPMSRPPQSGGITPVADNGAQAASALRTYK 594 ++G+++I+L PV+ N+ S+L +VNA+ +L P++R P + I A N A S Y Sbjct: 538 YNGVRQILLDPVSQNLASFLKDVNAHPDQLTPLNRTPDAAAIPVSAHNAMAANSQGGLYS 597 Query: 595 DSSATSVEDAYNALKTYLMLADKSRAESSHLNDQITRFWRGWLETNRGTMPREQMIRSAE 654 D+S T+VEDAYNALKTYLML+DK E++HL DQ+ RFWRGWLETNRG MPR++MIRSAE Sbjct: 598 DASPTNVEDAYNALKTYLMLSDKRHVETAHLTDQVARFWRGWLETNRGNMPRDEMIRSAE 657 Query: 655 RLISFSLEQINDPSWPTIDNKLTLVDQARENLRRVVRGMPARERVYADVKARAATRFASM 714 R+I+F L +++D WP ID L LVDQ RENLRRVVRGMPAR+RVY ++KARA+TRFA M Sbjct: 658 RMITFYLARVSDDDWPMIDQNLGLVDQTRENLRRVVRGMPARQRVYEEIKARASTRFAPM 717 Query: 715 TVARIVGDKDRELVMGSYAIPGTFTRDAWEKFVQEAFKEAANKELQSADWVLKTSAKDDL 774 T+ARIVG+ + LV GSYAIPGTFTR+AW ++VQ A +EAA KELQ+ DWVL TSA DDL Sbjct: 718 TIARIVGENNTALVAGSYAIPGTFTREAWFQYVQPAIREAATKELQAKDWVLNTSAHDDL 777 Query: 775 TLEGSPEQIQKALVTQYKTEYAREWQKFLQGVSIVELRNLDDATNAMNRLGDPITSPMKK 834 TLEGSPEQIQKALVT YKT+YA WQKF+QG+++ + A +AMNRLGDP SP++K Sbjct: 778 TLEGSPEQIQKALVTMYKTDYAMHWQKFMQGIAVQSFGSFGQAVDAMNRLGDPQDSPIRK 837 Query: 835 VINTVYDETSWDNPSLVDAGLANAKSGFMGWFKETILRRSPAPAPT-QFNAD-----GTT 888 V+ T YD+TSWDNPSL +A L A+SG WFK+ R APT Q NA+ Sbjct: 838 VLETAYDQTSWDNPSLFNANLKRAQSGVTSWFKQWFSR-----APTGQLNANIDINGNPV 892 Query: 889 AIPMGPVGREFSGVARLVVSKDKNGSLLQTYLDNLSKLRTRLNTIKNQGDTGPGAKQLMQ 948 +PMGP+G+EFS + R+V + D NGS+L+ Y+D LSK+RTR N IKNQGD GPGA+QLMQ Sbjct: 893 EMPMGPIGQEFSALGRMVQTGD-NGSMLKGYMDTLSKVRTRFNVIKNQGDPGPGARQLMQ 951 Query: 949 QTLEGNGSELSDSLKFVDEEMLPGLNDQQKTVLRPLLVRPLVQGFNALVRPTEGEVNKIW 1008 QTL+G+GSEL+DSLK+VDE+ML GL D Q+ LRPLLVRPL+ + +++P EVNK+W Sbjct: 952 QTLDGSGSELADSLKYVDEQMLTGLTDSQRKALRPLLVRPLMAAYAVVIQPASVEVNKVW 1011 Query: 1009 RAQVYEPFQSNLAAKYPFSPNSKIEANSGEIGTVFGENGAISKFVTTAMGPLVVRRGDTL 1068 AQVY+ FQ++LA KYPF+ ++K+EA +GEI VFG +G+I+KFV T +GPL VRRGDTL Sbjct: 1012 NAQVYQTFQNSLANKYPFAGDAKVEAGAGEIAQVFGPDGSIAKFVGTTLGPLAVRRGDTL 1071 Query: 1069 SPRKWADMGINLSPAITSNFASWIS----APGGGEANGGANSAQTVFQIQPQPAPGALEY 1124 + R W DMG+ L+P TS FA W++ G A G+ QTVFQI PQP+ G EY Sbjct: 1072 TARTWGDMGLALTPDFTSGFARWVAPLAGGAAGASAGQGSAEPQTVFQILPQPSSGTTEY 1131 Query: 1125 TIEIDGQQLRYRNTQAQWTNFIWPNPQGTPGARVTAQTYDGRTIEVASQPGRFGLERLIN 1184 T+ IDGQQ+RYRNT QWTNF+WPNP G+PGA + A T+DGRT+++ ++PGR+GLE+LIN Sbjct: 1132 TLAIDGQQMRYRNTPPQWTNFVWPNPSGSPGATLNATTFDGRTLQLVNEPGRYGLEKLIN 1191 Query: 1185 SAQRKRKDNGVFELSWTNEGVTVVVNLKIISSAEVS-GTANGPARGTASLRGLKLPETIA 1243 SAQRKR+ +G F+LSWT +TV V+++IIS+++ S G+++ P + SLRGL+LP ++A Sbjct: 1192 SAQRKRRPDGTFDLSWTQGNITVAVSMRIISTSQASGGSSDAPQQ--QSLRGLRLPSSVA 1249