BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0267.p (893 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774174.1| ClpA/B-type chaperone protein [Herbaspirillu... 1804 0.0 ref|YP_003777410.1| ClpA/B-type chaperone ATPase [Herbaspirillum... 1444 0.0 ref|YP_004750730.1| ClpB protein [Collimonas fungivorans Ter331]... 1382 0.0 ref|ZP_05135429.1| type VI secretion ATPase, ClpV1 family [Steno... 1306 0.0 ref|YP_285380.1| AAA ATPase, central region:Clp, N terminal [Dec... 1288 0.0 ref|YP_202114.1| ClpB [Xanthomonas oryzae pv. oryzae KACC10331] ... 1286 0.0 ref|ZP_02242346.1| ClpB [Xanthomonas oryzae pv. oryzicola BLS256] 1286 0.0 ref|YP_001914857.1| type VI secretion ATPase, ClpV1 family [Xant... 1283 0.0 ref|YP_004157794.1| type VI secretion ATPase, clpv1 family [Vari... 1242 0.0 ref|NP_522310.1| putative CLPA/B-type chaperone protein [Ralston... 1240 0.0 >ref|YP_003774174.1| ClpA/B-type chaperone protein [Herbaspirillum seropedicae SmR1] gb|ADJ62266.1| ClpA/B-type chaperone protein [Herbaspirillum seropedicae SmR1] Length = 893 Score = 1804 bits (4673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 889/893 (99%), Positives = 891/893 (99%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 MGINLKSLISKLNDSSR+ATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG Sbjct: 1 MGINLKSLISKLNDSSRLATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL Sbjct: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQADEQQG 180 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASA+ASAAADGQADEQQG Sbjct: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASASASAAADGQADEQQG 180 Query: 181 GDPVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPILT 240 GDPVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPILT Sbjct: 181 GDPVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPILT 240 Query: 241 GEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVIDE 300 GEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVIDE Sbjct: 241 GEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVIDE 300 Query: 301 VKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEK 360 VKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEK Sbjct: 301 VKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEK 360 Query: 361 DAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISGRQ 420 DAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISGRQ Sbjct: 361 DAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISGRQ 420 Query: 421 LPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRLGE 480 LPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRLGE Sbjct: 421 LPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRLGE 480 Query: 481 LQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALEEANQESASSHDSAAARSELQQLL 540 LQAQHAQAIAEQTELQQRWEQER LNGRIQAARAALEEANQESASS DSAAARSELQQLL Sbjct: 481 LQAQHAQAIAEQTELQQRWEQERELNGRIQAARAALEEANQESASSQDSAAARSELQQLL 540 Query: 541 AQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLGLDALLKERVLGQP 600 AQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLGLDALLKERVLGQP Sbjct: 541 AQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLGLDALLKERVLGQP 600 Query: 601 QATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINM 660 QATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINM Sbjct: 601 QATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINM 660 Query: 661 SEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVF 720 SEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVF Sbjct: 661 SEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVF 720 Query: 721 DKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAELPTPDELDVLIRPQLVKA 780 DKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAELPTPDELDVLIRPQLVKA Sbjct: 721 DKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAELPTPDELDVLIRPQLVKA 780 Query: 781 FKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAENHKAEFSYDKALVEAVLARCT 840 FKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAENHKAEFSYDKALVEAVLARCT Sbjct: 781 FKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAENHKAEFSYDKALVEAVLARCT 840 Query: 841 EVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKVSAGKKGDFKYTIQ 893 EVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKVSAGKKGDFKYTIQ Sbjct: 841 EVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKVSAGKKGDFKYTIQ 893 >ref|YP_003777410.1| ClpA/B-type chaperone ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65502.1| ClpA/B-type chaperone ATPase protein [Herbaspirillum seropedicae SmR1] Length = 889 Score = 1444 bits (3739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 724/896 (80%), Positives = 792/896 (88%), Gaps = 10/896 (1%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 MGINL+SLI KLN+++R+ATERAA+LC++ YEVDLEHLFLALLE PQ+DFSLI RRSG Sbjct: 1 MGINLRSLICKLNETARLATERAATLCVSCSHYEVDLEHLFLALLEQPQSDFSLIARRSG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 I D LQADLEHEIS F+ GN RTPVLS HL+TLFE+GWLIASL+ PS+RS HLLLAL Sbjct: 61 IDTDGLQADLEHEISTFREGNARTPVLSPHLRTLFENGWLIASLEESNPSVRSAHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQA-DEQQ 179 LTQ++L+QLAYRGSKLFA+FK+DE+KH+L +LTEGSVE+ A+ GQ D + Sbjct: 121 LTQSDLSQLAYRGSKLFAKFKIDEIKHNLHRLTEGSVESAAIGKT-------GQGGDRES 173 Query: 180 GGDPVGEMRA--GGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNP 237 GGDP+GE++ G+ ALDQYTT LTQRAR+GKIDPV+GRD EIRQAVDILLRRRQNNP Sbjct: 174 GGDPMGELKQLRIGKMTALDQYTTQLTQRARDGKIDPVIGRDAEIRQAVDILLRRRQNNP 233 Query: 238 ILTGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGV 297 ILTGEAGVGKTAVVEGLALRIAQ DVP+ LQGVEIHTLDMGLLQAGASVKGEFE+RLK V Sbjct: 234 ILTGEAGVGKTAVVEGLALRIAQGDVPKPLQGVEIHTLDMGLLQAGASVKGEFESRLKTV 293 Query: 298 IDEVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKY 357 IDEVKKS +PIILFIDEAHTMIGA GQAGQ+DAANLLKPALARGELRTIAATTWSEYKKY Sbjct: 294 IDEVKKSAYPIILFIDEAHTMIGAAGQAGQSDAANLLKPALARGELRTIAATTWSEYKKY 353 Query: 358 FEKDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYIS 417 FEKDAALARRFQVIKVEEP E+VACAMLRAM PLME+HFGVRVYDEA+ EAVRLSHRYIS Sbjct: 354 FEKDAALARRFQVIKVEEPGEDVACAMLRAMVPLMEQHFGVRVYDEAVVEAVRLSHRYIS 413 Query: 418 GRQLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATR 477 GRQLPDKAISVLDTACAKVALG++ATPA LEGVTRRLERL EI+AL RE SG+ H R Sbjct: 414 GRQLPDKAISVLDTACAKVALGRDATPALLEGVTRRLERLDTEISALRREAASGSQHEER 473 Query: 478 LGELQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALEEANQESASSHDSAAARSELQ 537 L L QH A+AE+ +LQ RWEQER LN RIQ ARA LE A + AAR+EL+ Sbjct: 474 LASLLDQHVCAVAERHDLQLRWEQERELNERIQQARATLENPGTGDARGGNVDAARAELK 533 Query: 538 QLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLGLDALLKERVL 597 QLL +L++ QG+ PMVP+QVDGHVVAEIVA WTGIPLGKMVKDEI+TVL LDALL+ERVL Sbjct: 534 QLLDELRQRQGDAPMVPIQVDGHVVAEIVAAWTGIPLGKMVKDEIQTVLDLDALLQERVL 593 Query: 598 GQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLIT 657 GQPQAT+AVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLIT Sbjct: 594 GQPQATSAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLIT 653 Query: 658 INMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFF 717 INMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAH DVLELFF Sbjct: 654 INMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHADVLELFF 713 Query: 718 QVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAELPTPDELDVLIRPQL 777 QVFDKGVMDD EGREIDFKNTIIILTSNVAS+Q+MQACLNKS ELPTP+ELD LIRPQL Sbjct: 714 QVFDKGVMDDAEGREIDFKNTIIILTSNVASAQMMQACLNKSQEELPTPEELDTLIRPQL 773 Query: 778 VKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAENHKAEFSYDKALVEAVLA 837 +K FKPAFLGRLKV+PYYPI+D VL +IIKLKL RIA R+AENH+ EFSYDKALVEAVL Sbjct: 774 IKTFKPAFLGRLKVVPYYPIADVVLVEIIKLKLARIAKRVAENHRVEFSYDKALVEAVLG 833 Query: 838 RCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKVSAGKKGDFKYTIQ 893 RCTEVDSGARNVDNIL+G+LLP +AESVL RMAEG I RIKVSA KKGDFKYTIQ Sbjct: 834 RCTEVDSGARNVDNILSGTLLPAVAESVLVRMAEGVEIRRIKVSASKKGDFKYTIQ 889 >ref|YP_004750730.1| ClpB protein [Collimonas fungivorans Ter331] gb|AEK59907.1| ClpB protein [Collimonas fungivorans Ter331] Length = 899 Score = 1382 bits (3577), Expect = 0.0, Method: Compositional matrix adjust. Identities = 696/906 (76%), Positives = 778/906 (85%), Gaps = 20/906 (2%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 M INLK+LISKLND+SR+A ERAA++C+ RGQYEVD+EHLFLALLE P++DF++I R+SG Sbjct: 1 MSINLKTLISKLNDTSRLAAERAANICVGRGQYEVDIEHLFLALLEQPKSDFAVIARKSG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 IS +L++DL+ EI +FKNGN RTPV S HL LFEH WLIASLD + IRSGHLLLAL Sbjct: 61 ISLAALESDLQGEIDRFKNGNARTPVFSPHLPKLFEHAWLIASLDNQSGRIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQA-DEQQ 179 LT+ +L QLAYRGSKLF +FK+D+LKHDL KLTEGS E+ A+ DG A E + Sbjct: 121 LTEPDLVQLAYRGSKLFIKFKLDDLKHDLEKLTEGSQES-------AAVNGDGTAATEDE 173 Query: 180 GGDPVGEMRA-GGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPI 238 GGDPV ++ +TP+LD++TTNLTQRAREGK+DPV+GRD EIRQ +DIL+RRRQNNPI Sbjct: 174 GGDPVQDLTGEASKTPSLDKFTTNLTQRAREGKVDPVIGRDTEIRQTIDILMRRRQNNPI 233 Query: 239 LTGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVI 298 LTGEAGVGKTAVVEGLALRIAQ DVP LQGVE+HTLDMGLLQAGASVKGEFENRLK VI Sbjct: 234 LTGEAGVGKTAVVEGLALRIAQKDVPDVLQGVEVHTLDMGLLQAGASVKGEFENRLKSVI 293 Query: 299 DEVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYF 358 DEVKKS H IILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYF Sbjct: 294 DEVKKSSHAIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYF 353 Query: 359 EKDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISG 418 EKDAALARRFQV+KVEEP+EE+ACAMLR MAPLMEKHFGVRV+DEAITEAVRLSHRYISG Sbjct: 354 EKDAALARRFQVVKVEEPSEELACAMLRGMAPLMEKHFGVRVFDEAITEAVRLSHRYISG 413 Query: 419 RQLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRL 478 RQLPDKAISVLDTACAKVALGQNATPA +E + ++L+RL AE+ +LERE+ +G HA RL Sbjct: 414 RQLPDKAISVLDTACAKVALGQNATPALIENIVKKLDRLVAELNSLERESNAGGKHAERL 473 Query: 479 GELQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALE-------EANQESASSHDSAA 531 EL+ + AE ++RWE+E+ L RI+AAR LE A +E A AA Sbjct: 474 KELRELQSTLNAELAIHRERWEKEKTLTDRIKAARTELEAIPAAEQTAAEEGAKPSKKAA 533 Query: 532 ARS----ELQQLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLG 587 S EL +L+ +LK QGETPMVPVQVDG VVAEIVA WTGIPLGKMVKDEIKTV+ Sbjct: 534 KDSKENQELAKLIEELKTLQGETPMVPVQVDGLVVAEIVASWTGIPLGKMVKDEIKTVIN 593 Query: 588 LDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADV 647 L ALL ERVLGQP A AVAQRVRTSRANLDDP KPKGVFLFVGPSGVGKTETALALADV Sbjct: 594 LGALLHERVLGQPHAIEAVAQRVRTSRANLDDPNKPKGVFLFVGPSGVGKTETALALADV 653 Query: 648 LYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEK 707 LYGGERKL+TINMSEYQEAH+VSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEK Sbjct: 654 LYGGERKLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEK 713 Query: 708 AHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAELPTPD 767 AHPDVLELFFQVFDKGV+DD EGREIDFKNTIIILTSNVASS +MQ+CLNK+AAELP+ D Sbjct: 714 AHPDVLELFFQVFDKGVLDDAEGREIDFKNTIIILTSNVASSLIMQSCLNKAAAELPSTD 773 Query: 768 ELDVLIRPQLVKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAENHKAEFSY 827 +L+ IRPQLVKAFKPAFLGRLKVIPYYPISD+VL +II LKLGRI RIA NHKAEFSY Sbjct: 774 DLEQAIRPQLVKAFKPAFLGRLKVIPYYPISDDVLVEIINLKLGRIQKRIAINHKAEFSY 833 Query: 828 DKALVEAVLARCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKVSAGKKGD 887 D+ LVEAVLARCTEVDSGARNVDNILNG+LLPEIAE+VLA+MAEG I++IKV+A K+G Sbjct: 834 DEPLVEAVLARCTEVDSGARNVDNILNGTLLPEIAETVLAKMAEGGSIAKIKVTANKQGQ 893 Query: 888 FKYTIQ 893 FKY I+ Sbjct: 894 FKYAIK 899 >ref|ZP_05135429.1| type VI secretion ATPase, ClpV1 family [Stenotrophomonas sp. SKA14] gb|EED39490.1| type VI secretion ATPase, ClpV1 family [Stenotrophomonas sp. SKA14] Length = 917 Score = 1306 bits (3379), Expect = 0.0, Method: Compositional matrix adjust. Identities = 670/918 (72%), Positives = 753/918 (82%), Gaps = 28/918 (3%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 M INLK+LISKL+D+ R A ERAA+LCMARG YEVDLEHLFLALLE PQ+DF LI RRSG Sbjct: 1 MSINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRSG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 I P+SL+ DL EISQFK GN+RTPV S H+ LFEH WLIASLD E IRSGHLLLAL Sbjct: 61 ILPESLERDLNDEISQFKTGNSRTPVFSQHIPKLFEHAWLIASLDSETTRIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQADEQQG 180 LT+ +LAQLAYRGSKLF RFK DELKHD AKLTEGS EA A ++AA G+A E +G Sbjct: 121 LTEPDLAQLAYRGSKLFVRFKRDELKHDFAKLTEGSQEAVQTVRFADASAA-GEAGEDEG 179 Query: 181 GDPVGEMRAG-GRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPIL 239 P GE + G +TPALDQ+TTNLTQRAR+GKIDPV+GRDGEIRQ +DIL+RRRQNNPIL Sbjct: 180 AVP-GEAKGGLSKTPALDQFTTNLTQRARDGKIDPVIGRDGEIRQVIDILMRRRQNNPIL 238 Query: 240 TGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVID 299 TGEAGVGKTAVVEGLA RIA DVP LQGVE+HTLDMGLLQAGASVKGEFENRLK VID Sbjct: 239 TGEAGVGKTAVVEGLARRIADKDVPDVLQGVELHTLDMGLLQAGASVKGEFENRLKNVID 298 Query: 300 EVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFE 359 EVKKSPHPIILFIDEAHTMIGAGG AGQNDAANLLKPALARGELRTIAATTW EYKKYFE Sbjct: 299 EVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWGEYKKYFE 358 Query: 360 KDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISGR 419 KDAALARRFQV+KVEEP+E +A AMLR M LME HF +RV DEA+TEAVRLSHRYISGR Sbjct: 359 KDAALARRFQVVKVEEPSEALAAAMLRGMVGLMEAHFNIRVLDEAVTEAVRLSHRYISGR 418 Query: 420 QLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGAS-HATRL 478 QLPDKA+SVLDTACAKVALGQ+ATPA +E + L+RL AEI+AL+RET G+ H RL Sbjct: 419 QLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLQAEISALQRETAGGSDQHGERL 478 Query: 479 GELQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALEEANQESASSHDS--------- 529 EL AQ A+A A T ++R +ER L GRI R +E+ S S Sbjct: 479 AELHAQQAEAQAVLTSNEERLGRERDLAGRIAVLRQQMEQGEAASGDPEPSNDDNEGDVA 538 Query: 530 ----AAAR-----------SELQQLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPL 574 AA R +EL +L A+L+E QGETPMVP+QVDG VVAEIV+ WTG+PL Sbjct: 539 VAKPAAKRGKAKAELSPQHAELARLQAELRELQGETPMVPLQVDGTVVAEIVSAWTGVPL 598 Query: 575 GKMVKDEIKTVLGLDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSG 634 G+MVKDEI+TV L LL ERV+GQ A A+AQRVRT+ A L+DP KP+GVF+FVGPSG Sbjct: 599 GRMVKDEIRTVRTLGNLLVERVIGQDHALDAIAQRVRTATAKLEDPNKPRGVFMFVGPSG 658 Query: 635 VGKTETALALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRR 694 VGKTETALALAD+LYGGERKL+TINMSEYQEAH+VSGLKGSPPGYVGYGEGGVLTEAVRR Sbjct: 659 VGKTETALALADILYGGERKLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRR 718 Query: 695 NPYSVVLLDEVEKAHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQA 754 NPYSVVLLDEVEKAHPDVLE+FFQVFDKG+MDD EGREIDF+NT+IILTSN+ SSQ+MQA Sbjct: 719 NPYSVVLLDEVEKAHPDVLEMFFQVFDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQA 778 Query: 755 CLNKSAAELPTPDELDVLIRPQLVKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIA 814 CLNK A E+P + L +RP L++ FKPAFLGRLKV+PYYPI+D+VL QII LKLGRI Sbjct: 779 CLNKPAEEIPGAEALSDALRPVLMRTFKPAFLGRLKVVPYYPINDDVLAQIITLKLGRIR 838 Query: 815 NRIAENHKAEFSYDKALVEAVLARCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQG 874 +R+ NHKA FS+D +LVEAVLARCTEVDSGARNVD+ILNG+LLPEIAESVLA MAEG Sbjct: 839 DRVIANHKATFSWDDSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGNR 898 Query: 875 ISRIKVSAGKKGDFKYTI 892 I+ IKV+AGKKGDFKY + Sbjct: 899 INAIKVTAGKKGDFKYKV 916 >ref|YP_285380.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica RCB] gb|AAZ46910.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica RCB] Length = 899 Score = 1288 bits (3334), Expect = 0.0, Method: Compositional matrix adjust. Identities = 654/904 (72%), Positives = 744/904 (82%), Gaps = 16/904 (1%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 M +LK+LISKLN + R A ERAASLCM+RG YEVDLEHL +A+LENP D +I +R G Sbjct: 1 MSTSLKTLISKLNSTCRQAAERAASLCMSRGNYEVDLEHLLIAILENPGADLLVIGKRCG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 ISP L+ +L EI +FK GNTRTPV S+H+ LFE WLIASLD P IRSGHLLLAL Sbjct: 61 ISPTGLERELNQEIDRFKTGNTRTPVFSTHILKLFEQAWLIASLDARLPRIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQADEQQG 180 LT+ EL+QLA+RGSKL + ++DELKH+ ++TEGS EA +A AASA ++D Sbjct: 121 LTEPELSQLAFRGSKLLGKVRLDELKHNFDQMTEGSAEAAEVAGLAASAEGGDESDPLLA 180 Query: 181 GDPVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPILT 240 G P GG+TPALDQ+TTNLTQRAR+GK+DPV+GRD EIRQ +DIL+RRRQNNPILT Sbjct: 181 GSP-----QGGKTPALDQFTTNLTQRARDGKVDPVIGRDSEIRQVIDILMRRRQNNPILT 235 Query: 241 GEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVIDE 300 GEAGVGKTAVVEGLALRIAQDDVP L GVE+HTLDMGLLQAGASVKGEFENRLK VIDE Sbjct: 236 GEAGVGKTAVVEGLALRIAQDDVPPPLLGVELHTLDMGLLQAGASVKGEFENRLKNVIDE 295 Query: 301 VKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEK 360 VKKS PIILFIDEAHTMIGAGGQ+GQNDAANLLKPALARGELRT+AATTW+EYKKYFEK Sbjct: 296 VKKSVKPIILFIDEAHTMIGAGGQSGQNDAANLLKPALARGELRTVAATTWAEYKKYFEK 355 Query: 361 DAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISGRQ 420 DAALARRFQ +KVEEPTE +A AMLR M PLMEKHFG+RV DEA+TEAVRLSHRYISGRQ Sbjct: 356 DAALARRFQGVKVEEPTEILASAMLRGMVPLMEKHFGIRVLDEAVTEAVRLSHRYISGRQ 415 Query: 421 LPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRLGE 480 LPDKAISVLDTACAKVALGQ+ATPA ++ +RL R AE+AALERE SGA H TR+ E Sbjct: 416 LPDKAISVLDTACAKVALGQSATPALIDEADKRLLRERAELAALEREAASGAWHDTRIKE 475 Query: 481 LQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALEEANQE-SASSHDSAAAR------ 533 L+AQ + ++ + + R+E+E+ L R+ R LE A+ A AR Sbjct: 476 LKAQISAIESDLSIFKTRFEEEKTLVNRVLELRGQLENGEVAVDAAPKPKARARKKGEGE 535 Query: 534 ----SELQQLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLGLD 589 SEL + LA+L+E QGE+PMVP+QVDGHVVAEI+A WTGIPLGKMVK+EI TVL L Sbjct: 536 AVGDSELDKALARLRELQGESPMVPLQVDGHVVAEIIAAWTGIPLGKMVKNEINTVLNLK 595 Query: 590 ALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLY 649 LLKERV+GQ A AVAQRVRT+RA L+DP KPKGVF+FVGPSGVGKTETALALAD+LY Sbjct: 596 PLLKERVIGQDHALEAVAQRVRTARAYLEDPNKPKGVFMFVGPSGVGKTETALALADILY 655 Query: 650 GGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAH 709 GGERKL+TINMSEYQEAH+VSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAH Sbjct: 656 GGERKLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAH 715 Query: 710 PDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAELPTPDEL 769 PDVLELFFQVFDKGV+DD EGREIDF+NT+IILTSNV S+Q+MQ+CLNK A ELP D L Sbjct: 716 PDVLELFFQVFDKGVLDDAEGREIDFRNTLIILTSNVGSTQIMQSCLNKPAEELPEADAL 775 Query: 770 DVLIRPQLVKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAENHKAEFSYDK 829 +RP L K+FKPAFLGR+KV+PYYPISD+VL II+LKLGRI +RIA NHKAEF +D Sbjct: 776 ADALRPILFKSFKPAFLGRMKVVPYYPISDDVLVSIIELKLGRIRDRIAANHKAEFIWDD 835 Query: 830 ALVEAVLARCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKVSAGKKGDFK 889 LVEAVLARCTEVDSGARNVD+ILNG+LLPEIAE VLARMAEG + RIKV AGK G+FK Sbjct: 836 KLVEAVLARCTEVDSGARNVDHILNGTLLPEIAEVVLARMAEGAAVERIKVGAGKSGEFK 895 Query: 890 YTIQ 893 Y I+ Sbjct: 896 YAIK 899 >ref|YP_202114.1| ClpB [Xanthomonas oryzae pv. oryzae KACC10331] ref|YP_452317.1| putative ClpA/B-type chaperone protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gb|AAW76729.1| ClpB [Xanthomonas oryzae pv. oryzae KACC10331] dbj|BAE70043.1| putative ClpA/B-type chaperone protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 909 Score = 1286 bits (3329), Expect = 0.0, Method: Compositional matrix adjust. Identities = 665/914 (72%), Positives = 745/914 (81%), Gaps = 28/914 (3%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 M INLK+LISKL+D+ R A ERAA+LCMARG YEVDLEHLFLALLE PQ+DF LI RR G Sbjct: 1 MSINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRCG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 ISP++L+ DL E+ +FK GNTRTPV S HL TLFEH WLIASLD E IRSGHLLLAL Sbjct: 61 ISPETLERDLSEEVGRFKAGNTRTPVFSQHLPTLFEHAWLIASLDSETTRIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQADEQQG 180 LT+ +L+QLAYRGSK F + K+D LKHD A+LTEGS EA + A GQAD G Sbjct: 121 LTEPDLSQLAYRGSKQFVKIKLDALKHDFARLTEGSQEA----GQSLRFADAGQAD--VG 174 Query: 181 GDPVGEMRA-----GG--RTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRR 233 GDPV + GG +TPALDQ+TTNL QRAR+ +IDPV+GRDGEIRQ +DIL+RRR Sbjct: 175 GDPVDGLAGAPDGKGGLTKTPALDQFTTNLVQRARDAQIDPVIGRDGEIRQVIDILMRRR 234 Query: 234 QNNPILTGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENR 293 QNNPILTGEAGVGKTAVVEGLA RIA+ DVP LQGVE+H LDMGLLQAGASVKGEFENR Sbjct: 235 QNNPILTGEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENR 294 Query: 294 LKGVIDEVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSE 353 LK VIDEVKKSPHPIILFIDEAHTMIGAGG AGQNDAANLLKPALARGELRTIAATTWSE Sbjct: 295 LKNVIDEVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWSE 354 Query: 354 YKKYFEKDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSH 413 YKKYFEKDAALARRFQV+KVEEP+E +A AMLR M PLMEKHFG+RV DEA+TEAVRLSH Sbjct: 355 YKKYFEKDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFGIRVMDEAVTEAVRLSH 414 Query: 414 RYISGRQLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGAS 473 RYISGRQLPDKA+SVLDTACAKVALGQ+ATPA +E + L+RLAAE+AAL RET GA Sbjct: 415 RYISGRQLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLAAELAALNRETSGGAR 474 Query: 474 HA-TRLGELQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALEEANQESASSHDS--- 529 H R+ EL A + Q R +ER L RI A RA LE A + + Sbjct: 475 HHDARVAELLQAQESARKVLADNQTRLVRERELAERIVALRAQLEAAPAAHEPAAAAKPA 534 Query: 530 -----------AAARSELQQLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMV 578 + ++L LLA+L E QGETPMVP+QVDG VVAEIV+ WTG+PLG+MV Sbjct: 535 RGAAKQATAAASPQHAQLDALLAELGELQGETPMVPLQVDGGVVAEIVSAWTGVPLGRMV 594 Query: 579 KDEIKTVLGLDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKT 638 KDEI+TV LD+LL ERV+GQ A AA+AQRVRT+ A L+DP KP+GVFLFVGPSGVGKT Sbjct: 595 KDEIRTVRNLDSLLGERVIGQDHALAAIAQRVRTATAKLEDPNKPRGVFLFVGPSGVGKT 654 Query: 639 ETALALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYS 698 ETALALAD+LYGGERKLITINMSEYQEAH+VSGLKGSPPGYVGYGEGGVLTEAVRRNPYS Sbjct: 655 ETALALADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYS 714 Query: 699 VVLLDEVEKAHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNK 758 VVLLDEVEKAHPDVLE+FFQVFDKGVMDD EGREIDF+NT+IILTSNV SSQ+MQACLNK Sbjct: 715 VVLLDEVEKAHPDVLEMFFQVFDKGVMDDAEGREIDFRNTLIILTSNVGSSQIMQACLNK 774 Query: 759 SAAELPTPDELDVLIRPQLVKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIA 818 A E+P D L +RP L+++FKPAFLGRLKV+PYYPISD+VL QII LKLGRI +R+A Sbjct: 775 PAEEIPAADALAEALRPILMRSFKPAFLGRLKVVPYYPISDDVLAQIIALKLGRIRDRLA 834 Query: 819 ENHKAEFSYDKALVEAVLARCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRI 878 NHKA F +D++LVEAVLARCTEVDSGARNVD+ILNG+LLPEIAESVLA MAEG I+ I Sbjct: 835 ANHKAAFHWDQSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGGNINAI 894 Query: 879 KVSAGKKGDFKYTI 892 KV AGK G FKY + Sbjct: 895 KVGAGKNGAFKYKL 908 >ref|ZP_02242346.1| ClpB [Xanthomonas oryzae pv. oryzicola BLS256] Length = 910 Score = 1286 bits (3328), Expect = 0.0, Method: Compositional matrix adjust. Identities = 663/915 (72%), Positives = 744/915 (81%), Gaps = 29/915 (3%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 M INLK+LISKL+D+ R A ERAA+LCMARG YEVDLEHLFLALLE PQ+DF LI RR G Sbjct: 1 MSINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRCG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 ISP++L+ DL E+ +FK GNTRTPV S HL TLFEH WLIASLD E IRSGHLLLAL Sbjct: 61 ISPETLERDLSEEVGRFKAGNTRTPVFSQHLPTLFEHAWLIASLDSETTRIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQADEQQG 180 LT+ +L+QLAYRGSK F + K+D LKHD A+LTEGS EA + A GQAD G Sbjct: 121 LTEPDLSQLAYRGSKQFVKIKLDALKHDFARLTEGSQEA----GQSLRFADAGQAD--VG 174 Query: 181 GDPVGEMRA-----GG--RTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRR 233 GDPV + GG +TPALDQ+TTNL QRAR+ +IDPV+GRDGEIRQ +DIL+RRR Sbjct: 175 GDPVDGLAGVPDGKGGLTKTPALDQFTTNLVQRARDAQIDPVIGRDGEIRQVIDILMRRR 234 Query: 234 QNNPILTGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENR 293 QNNPILTGEAGVGKTAVVEGLA RIA+ DVP LQGVE+H LDMGLLQAGASVKGEFENR Sbjct: 235 QNNPILTGEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENR 294 Query: 294 LKGVIDEVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSE 353 LK VIDEVKKSPHPIILFIDEAHTMIGAGG AGQNDAANLLKPALARGELRTIAATTWSE Sbjct: 295 LKNVIDEVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWSE 354 Query: 354 YKKYFEKDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSH 413 YKKYFEKDAALARRFQV+KVEEP+E +A AMLR M PLMEKHFG+RV DEA+TEAVRLSH Sbjct: 355 YKKYFEKDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFGIRVMDEAVTEAVRLSH 414 Query: 414 RYISGRQLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGAS 473 RYISGRQLPDKA+SVLDTACAKVALGQ+ATPA +E + L+RLAAE+AAL RET GA Sbjct: 415 RYISGRQLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLAAELAALNRETSGGAR 474 Query: 474 HA-TRLGELQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALEEANQESASSHDS--- 529 H R+ EL A + Q R +ER L RI A RA LE + + + Sbjct: 475 HHDARVAELLQAQESARKVLADNQTRLVRERELAERIVALRAQLEAVPAAAEPAAAAAKP 534 Query: 530 ------------AAARSELQQLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKM 577 + ++L LLA+L E QGETPMVP+QVDG VVAEIV+ WTG+PLG+M Sbjct: 535 ARGAAKQATAAASPQHAQLDALLAELGELQGETPMVPLQVDGGVVAEIVSAWTGVPLGRM 594 Query: 578 VKDEIKTVLGLDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGK 637 VKDEI+TV LD+LL ERV+GQ A AA++QRVRT+ A L+DP KP+GVFLFVGPSGVGK Sbjct: 595 VKDEIRTVRNLDSLLGERVIGQDHALAAISQRVRTATAKLEDPNKPRGVFLFVGPSGVGK 654 Query: 638 TETALALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPY 697 TETALALAD+LYGGERKLITINMSEYQEAH+VSGLKGSPPGYVGYGEGGVLTEAVRRNPY Sbjct: 655 TETALALADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPY 714 Query: 698 SVVLLDEVEKAHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLN 757 SVVLLDEVEKAHPDVLE+FFQVFDKGVMDD EGREIDF+NT+IILTSNV SSQ+MQACLN Sbjct: 715 SVVLLDEVEKAHPDVLEMFFQVFDKGVMDDAEGREIDFRNTLIILTSNVGSSQIMQACLN 774 Query: 758 KSAAELPTPDELDVLIRPQLVKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRI 817 K A E+P D L +RP L+++FKPAFLGRLKV+PYYPISD+VL QII LKLGRI R+ Sbjct: 775 KPAEEIPAADALAEALRPILMRSFKPAFLGRLKVVPYYPISDDVLAQIIALKLGRIRERV 834 Query: 818 AENHKAEFSYDKALVEAVLARCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISR 877 A NHKA F +D++LVEAVLARCTEVDSGARNVD+ILNG+LLPEIAESVLA MAEG I+ Sbjct: 835 ATNHKAAFQWDQSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGGNINA 894 Query: 878 IKVSAGKKGDFKYTI 892 IKV AGK G FKY + Sbjct: 895 IKVGAGKNGAFKYKL 909 >ref|YP_001914857.1| type VI secretion ATPase, ClpV1 family [Xanthomonas oryzae pv. oryzae PXO99A] gb|ACD60325.1| type VI secretion ATPase, ClpV1 family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 910 Score = 1283 bits (3321), Expect = 0.0, Method: Compositional matrix adjust. Identities = 664/915 (72%), Positives = 745/915 (81%), Gaps = 29/915 (3%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 M INLK+LISKL+D+ R A ERAA+LCMARG YEVDLEHLFLALLE PQ+DF LI RR G Sbjct: 1 MSINLKTLISKLDDTCRQAAERAANLCMARGNYEVDLEHLFLALLEQPQSDFVLIARRCG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 ISP++L+ DL E+ +FK GNTRTPV S HL TLFEH WLIASLD E IRSGHLLLAL Sbjct: 61 ISPETLERDLSEEVGRFKAGNTRTPVFSQHLPTLFEHAWLIASLDSETTRIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQADEQQG 180 LT+ +L+QLAYRGSK F + K+D LKHD A+LTEGS EA + A GQAD G Sbjct: 121 LTEPDLSQLAYRGSKQFVKIKLDALKHDFARLTEGSQEA----GQSLRFADAGQAD--VG 174 Query: 181 GDPVGEMRA-----GG--RTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRR 233 GDPV + GG +TPALDQ+TTNL QRAR+ +IDPV+GRDGEIRQ +DIL+RRR Sbjct: 175 GDPVDGLAGVPDGKGGLTKTPALDQFTTNLVQRARDAQIDPVIGRDGEIRQVIDILMRRR 234 Query: 234 QNNPILTGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENR 293 QNNPILTGEAGVGKTAVVEGLA RIA+ DVP LQGVE+H LDMGLLQAGASVKGEFENR Sbjct: 235 QNNPILTGEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENR 294 Query: 294 LKGVIDEVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSE 353 LK VIDEVKKSPHPIILFIDEAHTMIGAGG AGQNDAANLLKPALARGELRTIAATTWSE Sbjct: 295 LKNVIDEVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAATTWSE 354 Query: 354 YKKYFEKDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSH 413 YKKYFEKDAALARRFQV+KVEEP+E +A AMLR M PLMEKHFG+RV DEA+TEAVRLSH Sbjct: 355 YKKYFEKDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFGIRVMDEAVTEAVRLSH 414 Query: 414 RYISGRQLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGAS 473 RYISGRQLPDKA+SVLDTACAKVALGQ+ATPA +E + L+RLAAE+AAL RET GA Sbjct: 415 RYISGRQLPDKAVSVLDTACAKVALGQSATPAIIEDTRKHLDRLAAELAALNRETSGGAR 474 Query: 474 HA-TRLGELQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALEEA------------- 519 H R+ EL A + Q R +ER L RI A RA LE Sbjct: 475 HHDARVAELLQAQESARKVLADNQTRLVRERELAERIVALRAQLEAVPAAAEPAAVAAKP 534 Query: 520 --NQESASSHDSAAARSELQQLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKM 577 ++ ++ ++L LLA+L E QGETPMVP+QVDG VVAEIV+ WTG+PLG+M Sbjct: 535 ARGAAKQATAAASPQHAQLDALLAELGELQGETPMVPLQVDGGVVAEIVSAWTGVPLGRM 594 Query: 578 VKDEIKTVLGLDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGK 637 VKDEI+TV LD+LL ERV+GQ A AA+AQRVRT+ A L+DP KP+GVFLFVGPSGVGK Sbjct: 595 VKDEIRTVRNLDSLLGERVIGQDHALAAIAQRVRTATAKLEDPNKPRGVFLFVGPSGVGK 654 Query: 638 TETALALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPY 697 TETALALAD+LYGGERKLITINMSEYQEAH+VSGLKGSPPGYVGYGEGGVLTEAVRRNPY Sbjct: 655 TETALALADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPY 714 Query: 698 SVVLLDEVEKAHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLN 757 SVVLLDEVEKAHPDVLE+FFQVFDKGVMDD EGREIDF+NT+IILTSNV SSQ+MQACLN Sbjct: 715 SVVLLDEVEKAHPDVLEMFFQVFDKGVMDDAEGREIDFRNTLIILTSNVGSSQIMQACLN 774 Query: 758 KSAAELPTPDELDVLIRPQLVKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRI 817 K A E+P D L +RP L+++FKPAFLGRLKV+PYYPISD+VL QII LKLGRI +R+ Sbjct: 775 KPAEEIPAADALAEALRPILMRSFKPAFLGRLKVVPYYPISDDVLAQIIALKLGRIRDRV 834 Query: 818 AENHKAEFSYDKALVEAVLARCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISR 877 A NHKA F +D++LVEAVLARCTEVDSGARNVD+ILNG+LLPEIAESVLA MAEG I+ Sbjct: 835 ATNHKAAFHWDQSLVEAVLARCTEVDSGARNVDHILNGTLLPEIAESVLAAMAEGGNINA 894 Query: 878 IKVSAGKKGDFKYTI 892 IKV AGK G FKY + Sbjct: 895 IKVGAGKNGAFKYKL 909 >ref|YP_004157794.1| type VI secretion ATPase, clpv1 family [Variovorax paradoxus EPS] gb|ADU39683.1| type VI secretion ATPase, ClpV1 family [Variovorax paradoxus EPS] Length = 906 Score = 1242 bits (3214), Expect = 0.0, Method: Compositional matrix adjust. Identities = 641/912 (70%), Positives = 740/912 (81%), Gaps = 27/912 (2%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 M +LK+LI+KLN S+R+AT+RAA+LC+A G YEVDLEHLFLALLE D + ++R + Sbjct: 1 MSTSLKTLITKLNASARMATQRAANLCLANGHYEVDLEHLFLALLEQTDNDLARVLRANR 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 IS ++Q+DLE EI FKNGNTRTPV S HLQ LF+ WL+ASLD IRSGHLLLAL Sbjct: 61 ISATAIQSDLEREIQTFKNGNTRTPVFSQHLQQLFQQAWLLASLDAHVAQIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQADEQQG 180 LT+ +LAQLA RGS LFA+ ++++LKHD KLT+GS EA A A AS A + D QQ Sbjct: 121 LTEPDLAQLAQRGSPLFAKIRLEDLKHDFDKLTDGSSEA---AEAGASGGAATEGDAQQA 177 Query: 181 GDPVGEMRAG--GRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPI 238 P + AG G+TPALDQ+TTNLTQRA++G +DPV+GRD EIRQ +DIL+RRRQNNPI Sbjct: 178 --PADALAAGVPGKTPALDQFTTNLTQRAKDGALDPVIGRDTEIRQVIDILMRRRQNNPI 235 Query: 239 LTGEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVI 298 LTGEAGVGKTAVVEGLALRIA +DVP++L+ V +HTLDMGLLQAGASVKGEFENRLK VI Sbjct: 236 LTGEAGVGKTAVVEGLALRIATEDVPESLRAVALHTLDMGLLQAGASVKGEFENRLKNVI 295 Query: 299 DEVKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYF 358 EVKKSPHPI+LFIDEAHTMIGAGGQAGQ+DAANLLKPALARGELRTIAATTW EYKKYF Sbjct: 296 AEVKKSPHPIVLFIDEAHTMIGAGGQAGQSDAANLLKPALARGELRTIAATTWGEYKKYF 355 Query: 359 EKDAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISG 418 EKDAALARRFQV+KVEEP+E +A AMLR M PLMEKHF +RV DEAITEAVRLSHRYISG Sbjct: 356 EKDAALARRFQVVKVEEPSETLAAAMLRGMVPLMEKHFNIRVLDEAITEAVRLSHRYISG 415 Query: 419 RQLPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRL 478 RQLPDKA+SVLDTACAKVALGQ+ATPA +E R LER+ AE AAL R+T +G H RL Sbjct: 416 RQLPDKAVSVLDTACAKVALGQSATPALIEEANRGLERIEAESAALVRDTAAGGRHEVRL 475 Query: 479 GELQAQHAQAIAEQTELQQRWEQERALNGRIQAARAALEEA------------------N 520 EL + + AE QQR +E AL RI+A RA +E+ Sbjct: 476 AELAEKKSALQAELAASQQRLAEENALVERIRALRAQRDESAAQPEAAPAEKAPARAASR 535 Query: 521 QESASSHDSAAARSELQQLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKD 580 ++SA+S D R +L LLA+L+ QG TPMVP+QVDGHVVAEIV+ WTG+PLG+MVKD Sbjct: 536 KKSATSADPE--RDQLDALLAELRALQGTTPMVPLQVDGHVVAEIVSAWTGVPLGRMVKD 593 Query: 581 EIKTVLGLDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTET 640 EIKTV LD LL ERV+GQ A AAVAQRVRT+ A L+DP KP+GVF+FVGPSGVGKTET Sbjct: 594 EIKTVRALDTLLAERVIGQDHALAAVAQRVRTASARLEDPNKPRGVFMFVGPSGVGKTET 653 Query: 641 ALALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVV 700 ALALAD+LYGGE+KLITINMSEYQEAH+VSGLKGSPPGYVGYGEGGVLTEAVRR PYSVV Sbjct: 654 ALALADILYGGEKKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRQPYSVV 713 Query: 701 LLDEVEKAHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSA 760 LLDEVEKAHPDVLE+FFQVFDKG+MDD EGREIDF+NT+IILTSN+ SSQ+MQACLNK+ Sbjct: 714 LLDEVEKAHPDVLEMFFQVFDKGMMDDAEGREIDFRNTLIILTSNIGSSQIMQACLNKAD 773 Query: 761 AELPTPDELDVLIRPQLVKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAEN 820 E P PD L +RP L+KAFKPAFLGR+KV P+YPI+D VLEQII LKLGRI +RIA N Sbjct: 774 DERPAPDALADALRPVLMKAFKPAFLGRMKVAPFYPITDAVLEQIIALKLGRIRDRIATN 833 Query: 821 HKAEFSYDKALVEAVLARCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKV 880 HKA F +D ALVEAVLARCTEVDSGARNVD+ILNG+LLPEIAE+VL RMA+ +++IK Sbjct: 834 HKAVFEWDDALVEAVLARCTEVDSGARNVDHILNGTLLPEIAEAVLTRMADETPLAKIKA 893 Query: 881 SAGKKGDFKYTI 892 S K G+F+Y I Sbjct: 894 SCAKSGEFRYRI 905 >ref|NP_522310.1| putative CLPA/B-type chaperone protein [Ralstonia solanacearum GMI1000] emb|CAD17900.1| putative clpa/b-type chaperone protein [Ralstonia solanacearum GMI1000] Length = 905 Score = 1240 bits (3209), Expect = 0.0, Method: Compositional matrix adjust. Identities = 646/914 (70%), Positives = 728/914 (79%), Gaps = 30/914 (3%) Query: 1 MGINLKSLISKLNDSSRIATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG 60 M LK+LI+KLN +SR A ERAASLCMARG YEVDLEHLFLALLEN ++DF++ R SG Sbjct: 1 MATPLKTLIAKLNATSRQAAERAASLCMARGNYEVDLEHLFLALLENRRSDFAVAARASG 60 Query: 61 ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL 120 I P +LQ DLE E+ +F+ GNTRTP S +L LFEH WLIASLD + IRSGHLLLAL Sbjct: 61 IDPAALQRDLEAEVGRFQTGNTRTPAFSPYLPKLFEHAWLIASLDSQITRIRSGHLLLAL 120 Query: 121 LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASAAASAAADGQADEQQG 180 LT+ LA LA RGS+LF RF+V+ LKHD ++T GS E A ADG A + Sbjct: 121 LTEPSLAALAERGSRLFGRFEVERLKHDFERMTTGSDE-----QEQAVDFADGTAVQTDD 175 Query: 181 GDPVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPILT 240 G A G TPALDQ+T +LTQ AREG+IDPV+GRD EIRQ VDIL+RRRQNNPILT Sbjct: 176 GR-TAPAAALGATPALDQFTVDLTQAAREGRIDPVIGRDAEIRQVVDILMRRRQNNPILT 234 Query: 241 GEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVIDE 300 GEAGVGKTAVVEGLALR+A +DVP L+GV + TLDMGLLQAGASVKGEFENRLK VIDE Sbjct: 235 GEAGVGKTAVVEGLALRVAANDVPPPLRGVTLRTLDMGLLQAGASVKGEFENRLKNVIDE 294 Query: 301 VKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEK 360 VKKSP PIILFIDEAHT+IGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEK Sbjct: 295 VKKSPKPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEK 354 Query: 361 DAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISGRQ 420 DAALARRFQV+KV+EP+E +A AMLR MAPLME+HFGVRV DEAITEAVRLSHRYISGRQ Sbjct: 355 DAALARRFQVVKVDEPSEPLAAAMLRGMAPLMERHFGVRVLDEAITEAVRLSHRYISGRQ 414 Query: 421 LPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRLGE 480 LPDKA+SVLDTACAKVALGQ+ATP +E + LERL EIAAL+RE +GA+H RL Sbjct: 415 LPDKAVSVLDTACAKVALGQSATPGAIEDDQKLLERLLGEIAALQREQSAGAAHDARLEA 474 Query: 481 LQAQHA---QAIAEQTELQQRWEQERALNGRIQAARAALEE--------------ANQE- 522 LQA+ A Q IA+ TE R +ERAL RIQA R A E AN + Sbjct: 475 LQAKRAELEQRIAQNTE---RLARERALVARIQALREARESDAAQAGAQDAEPVAANSDV 531 Query: 523 ---SASSHDSAAARSELQQLLAQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVK 579 S +A A EL LLA+L+ QGE PMVP+QVDGHVV+EIV+ WTGIPLG+MVK Sbjct: 532 VALSPKRARAADAPDELATLLAELRALQGEAPMVPLQVDGHVVSEIVSAWTGIPLGRMVK 591 Query: 580 DEIKTVLGLDALLKERVLGQPQATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTE 639 DE++TVL L LL RV+GQ A A+AQRVRT+ ANL+DP KP+GVFLF GPSGVGKTE Sbjct: 592 DELRTVLNLKPLLAARVIGQDHALDAIAQRVRTASANLEDPNKPRGVFLFAGPSGVGKTE 651 Query: 640 TALALADVLYGGERKLITINMSEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSV 699 TALALAD+LYGGERKLITINMSEYQEAH+VSGLKGSPPGYVGYGEGGVLTEAVRRNPYSV Sbjct: 652 TALALADILYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSV 711 Query: 700 VLLDEVEKAHPDVLELFFQVFDKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKS 759 VLLDEVEKAHPDVLE+FFQVFDKG MDD EGR IDF+NTIIILTSNV SS +MQACLN+ Sbjct: 712 VLLDEVEKAHPDVLEMFFQVFDKGEMDDAEGRPIDFRNTIIILTSNVGSSAIMQACLNQP 771 Query: 760 AAELPTPDELDVLIRPQLVKAFKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAE 819 A LP D L +RP L KAFKPAFLGR KV+PYYPI+D+VL +II LKLGRI +R+A Sbjct: 772 AEALPDADTLAETLRPVLYKAFKPAFLGRTKVVPYYPIADDVLAEIITLKLGRIRDRVAA 831 Query: 820 NHKAEFSYDKALVEAVLARCTEVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIK 879 NHKA F +D ALVE+VLARCTEVD+GAR VD+ILNG+LLPEIAE+VL RMAEG + +IK Sbjct: 832 NHKATFQWDNALVESVLARCTEVDAGARAVDHILNGTLLPEIAEAVLTRMAEGGSVEKIK 891 Query: 880 VSAGKKGDFKYTIQ 893 VS GK G+FKY I Sbjct: 892 VSVGKTGEFKYRIN 905