BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0262.p (163 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774170.1| hypothetical protein Hsero_0743 [Herbaspiril... 335 1e-90 ref|YP_003777414.1| hypothetical protein Hsero_4035 [Herbaspiril... 330 3e-89 ref|YP_004753864.1| hypothetical protein CFU_3217 [Collimonas fu... 270 4e-71 ref|YP_004751346.1| hypothetical Protein CFU_0688 [Collimonas fu... 268 2e-70 ref|YP_004750734.1| putative cytoplasmic protein USSDB7A [Collim... 266 1e-69 gb|AEG71709.1| secretion system protein (evpc-like), hemolysin-c... 178 2e-43 ref|ZP_00945137.1| Hypothetical Protein RRSL_01735 [Ralstonia so... 178 3e-43 ref|YP_003748012.1| secretion system protein C [Ralstonia solana... 177 5e-43 ref|ZP_07677469.1| type VI secretion system effector, Hcp1 famil... 175 2e-42 ref|NP_522306.1| hypothetical protein RS01963 [Ralstonia solanac... 174 3e-42 >ref|YP_003774170.1| hypothetical protein Hsero_0743 [Herbaspirillum seropedicae SmR1] emb|CAP19682.1| hypothetical protein HS279.0505 [Herbaspirillum seropedicae] gb|ADJ62262.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 163 Score = 335 bits (860), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 163/163 (100%), Positives = 163/163 (100%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF Sbjct: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG Sbjct: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 Query: 121 EILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 EILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI Sbjct: 121 EILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 >ref|YP_003777414.1| hypothetical protein Hsero_4035 [Herbaspirillum seropedicae SmR1] emb|CAP19687.1| hypothetical protein HS284.0971 [Herbaspirillum seropedicae] gb|ADJ65506.1| Conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 163 Score = 330 bits (847), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 160/163 (98%), Positives = 162/163 (99%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVY+QIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF Sbjct: 1 MAIDVYIQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG Sbjct: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 Query: 121 EILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 EILNETVGLKYSTVKWKYTQQK+ GGTAGNTSGGWDLSTNKVI Sbjct: 121 EILNETVGLKYSTVKWKYTQQKQGGGTAGNTSGGWDLSTNKVI 163 >ref|YP_004753864.1| hypothetical protein CFU_3217 [Collimonas fungivorans Ter331] gb|AEK63041.1| hypothetical protein CFU_3217 [Collimonas fungivorans Ter331] Length = 163 Score = 270 bits (691), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 136/162 (83%), Positives = 147/162 (90%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVYLQIDGIKGESTDD+HKDWIECK+V WEVLQPKSATAST GGHTAERCEHKDIV Sbjct: 1 MAIDVYLQIDGIKGESTDDIHKDWIECKSVQWEVLQPKSATASTAGGHTAERCEHKDIVI 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 TK+ADLASPLLLQN SSGKTIPKAKFEF+RADGKGER+RYFEIEL N++IS V PS+ G Sbjct: 61 TKLADLASPLLLQNCSSGKTIPKAKFEFLRADGKGERIRYFEIELENLLISDVAPSVTEG 120 Query: 121 EILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKV 162 +L+ETV LKYS VKWKYTQQK GG+ GNTSGGWDLSTNKV Sbjct: 121 SVLSETVSLKYSKVKWKYTQQKIAGGSGGNTSGGWDLSTNKV 162 >ref|YP_004751346.1| hypothetical Protein CFU_0688 [Collimonas fungivorans Ter331] gb|AEK60523.1| Hypothetical Protein CFU_0688 [Collimonas fungivorans Ter331] Length = 163 Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 133/163 (81%), Positives = 149/163 (91%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVYLQIDGIKGESTD HKDWIECK+V WEVLQPKSATASTGGGHTAERCEHKDIV Sbjct: 1 MAIDVYLQIDGIKGESTDSAHKDWIECKSVQWEVLQPKSATASTGGGHTAERCEHKDIVL 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 TK+ADLA+PLLLQN SSGKTIPKAKFEF+RADGKG+R++YFEIEL N++IS V PS++ G Sbjct: 61 TKIADLATPLLLQNCSSGKTIPKAKFEFLRADGKGDRIKYFEIELVNLLISDVTPSVQEG 120 Query: 121 EILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 ++L+ETV LKYS VKWKYTQQK GG+ GNTSGGWDLSTNKV+ Sbjct: 121 DVLSETVSLKYSQVKWKYTQQKIGGGSGGNTSGGWDLSTNKVV 163 >ref|YP_004750734.1| putative cytoplasmic protein USSDB7A [Collimonas fungivorans Ter331] gb|AEK59911.1| Putative cytoplasmic protein USSDB7A [Collimonas fungivorans Ter331] Length = 163 Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/163 (80%), Positives = 149/163 (91%) Query: 1 MAIDVYLQIDGIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVF 60 MAIDVYLQIDGIKGESTD HKDWIECK+V WEVLQPKSATASTGGGHTAERCEHKDIV Sbjct: 1 MAIDVYLQIDGIKGESTDSAHKDWIECKSVQWEVLQPKSATASTGGGHTAERCEHKDIVV 60 Query: 61 TKVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESG 120 TK+ADLA+PLLLQN SSGKTIPKAKFEF+RADGKG+R++YFEIEL N++IS V PS++ G Sbjct: 61 TKIADLATPLLLQNCSSGKTIPKAKFEFLRADGKGDRIKYFEIELVNLLISDVTPSVQEG 120 Query: 121 EILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTNKVI 163 ++L+E++ LKYS VKWKYTQQK GG+ GNTSGGWDLSTNKV+ Sbjct: 121 DVLSESISLKYSQVKWKYTQQKIGGGSGGNTSGGWDLSTNKVV 163 >gb|AEG71709.1| secretion system protein (evpc-like), hemolysin-coregulated protein [Ralstonia solanacearum Po82] Length = 167 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 83/159 (52%), Positives = 109/159 (68%), Gaps = 2/159 (1%) Query: 4 DVYLQID--GIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVFT 61 D+Y++ D IKGES D HKDWIE + ++QP+SATAST GGHTAERCEH+D+VFT Sbjct: 3 DIYVKFDSPAIKGESQDKDHKDWIEVNSWSQSIVQPRSATASTAGGHTAERCEHRDMVFT 62 Query: 62 KVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESGE 121 K D+ SPLL Q++S G T + EF RADG+G RV+Y EI+L N ++S V + + Sbjct: 63 KDLDVVSPLLYQHASGGTTFGEVSIEFFRADGEGNRVKYLEIKLKNAILSEVDSQVAAQG 122 Query: 122 ILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTN 160 I +T L+Y+ V+WKYTQQK GG GN+ G W L+ N Sbjct: 123 IPTDTFSLRYAAVQWKYTQQKSAGGQGGNSQGAWSLTKN 161 >ref|ZP_00945137.1| Hypothetical Protein RRSL_01735 [Ralstonia solanacearum UW551] gb|EAP72341.1| Hypothetical Protein RRSL_01735 [Ralstonia solanacearum UW551] emb|CAQ36652.1| protein of unknown function duf796 [Ralstonia solanacearum MolK2] Length = 167 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 83/159 (52%), Positives = 109/159 (68%), Gaps = 2/159 (1%) Query: 4 DVYLQID--GIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVFT 61 D+Y++ D IKGES D HKDWIE + ++QP+SATAST GGHTAERCEH+D+VFT Sbjct: 3 DIYVKFDSPAIKGESQDKDHKDWIEVNSWSQSIVQPRSATASTAGGHTAERCEHRDMVFT 62 Query: 62 KVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESGE 121 K D+ SPLL Q++S G T + EF RADG+G RV+Y EI+L N ++S V + + Sbjct: 63 KDLDVVSPLLYQHASGGTTFGEVTIEFFRADGEGNRVKYLEIKLKNAILSEVDSQVAAQG 122 Query: 122 ILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTN 160 I +T L+Y+ V+WKYTQQK GG GN+ G W L+ N Sbjct: 123 IPTDTFSLRYAAVQWKYTQQKSAGGQGGNSQGAWSLTKN 161 >ref|YP_003748012.1| secretion system protein C [Ralstonia solanacearum CFBP2957] emb|CBJ53615.1| secretion system protein (EvpC-like), Hemolysin-coregulated protein [Ralstonia solanacearum CFBP2957] Length = 167 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 82/159 (51%), Positives = 110/159 (69%), Gaps = 2/159 (1%) Query: 4 DVYLQID--GIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVFT 61 D+Y++ D IKGES D HKDWIE + ++QP+SATAST GGHTAERCEH+D+VFT Sbjct: 3 DIYVKFDSPAIKGESQDKDHKDWIEVNSWSQSIVQPRSATASTAGGHTAERCEHRDMVFT 62 Query: 62 KVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESGE 121 K D+ SPLL Q++S G T + EF RADG+G RV+Y E++L N ++S V + + Sbjct: 63 KDLDVVSPLLYQHASGGTTFGEVTIEFFRADGEGNRVKYLEVKLKNAILSEVDSQVVAQG 122 Query: 122 ILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTN 160 I +T L+Y++V+WKYTQQK GG GN+ G W L+ N Sbjct: 123 IPTDTFSLRYASVQWKYTQQKSAGGQGGNSQGAWSLTKN 161 >ref|ZP_07677469.1| type VI secretion system effector, Hcp1 family [Ralstonia sp. 5_7_47FAA] gb|EFP64202.1| type VI secretion system effector, Hcp1 family [Ralstonia sp. 5_7_47FAA] Length = 167 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 82/159 (51%), Positives = 108/159 (67%), Gaps = 2/159 (1%) Query: 4 DVYLQID--GIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVFT 61 D+Y++ D IKGES D HKDWIE + + QP+SATAST GGHTAERCEH+D+VFT Sbjct: 3 DIYVKFDSPAIKGESQDKDHKDWIEINSWSQAISQPRSATASTAGGHTAERCEHRDMVFT 62 Query: 62 KVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESGE 121 K D+ SPLL Q++S G T + EF RADG+G RV+Y E++L N ++S V + + Sbjct: 63 KDLDVVSPLLYQHASGGTTFGEVTIEFFRADGEGNRVKYLEVKLKNAILSEVDSQVVAQG 122 Query: 122 ILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTN 160 I +T L+Y+ V+WKYTQQK GG GN+ G W L+ N Sbjct: 123 IPTDTFSLRYAAVQWKYTQQKSAGGQGGNSQGAWSLTKN 161 >ref|NP_522306.1| hypothetical protein RS01963 [Ralstonia solanacearum GMI1000] emb|CAD17896.1| hypothetical protein of unknown function duf796 [Ralstonia solanacearum GMI1000] Length = 167 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 80/159 (50%), Positives = 109/159 (68%), Gaps = 2/159 (1%) Query: 4 DVYLQID--GIKGESTDDLHKDWIECKTVDWEVLQPKSATASTGGGHTAERCEHKDIVFT 61 D+Y++ D IKGES D HK+WIE + ++QP+SATAST GGHTAERCEH+D+VF+ Sbjct: 3 DIYVKFDSPAIKGESQDKDHKEWIEVNSWSQSIIQPRSATASTAGGHTAERCEHRDMVFS 62 Query: 62 KVADLASPLLLQNSSSGKTIPKAKFEFMRADGKGERVRYFEIELTNVMISSVKPSIESGE 121 K D+ SPLL Q++S G T + EF RADG+G RV+Y E++L N ++S V + + Sbjct: 63 KDLDVVSPLLYQHASGGTTFGEVTIEFFRADGEGNRVKYLEVKLKNAILSEVDSQVAAEG 122 Query: 122 ILNETVGLKYSTVKWKYTQQKKDGGTAGNTSGGWDLSTN 160 I +T L+Y+ V+WKYTQQK GG GN+ G W L+ N Sbjct: 123 IPTDTFSLRYAAVQWKYTQQKSAGGQGGNSQGAWSLTKN 161