BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0249.p (542 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum... 1030 0.0 ref|YP_004154959.1| ABC transporter [Variovorax paradoxus EPS] >... 625 e-177 ref|YP_004846474.1| ribose ABC transporter ATP-binding protein [... 610 e-172 ref|ZP_03699692.1| ABC transporter related protein [Lutiella nit... 609 e-172 ref|YP_003704664.1| ABC transporter-like protein [Truepera radio... 600 e-169 ref|YP_322687.1| ABC transporter-like protein [Anabaena variabil... 580 e-163 ref|YP_001868587.1| ABC transporter [Nostoc punctiforme PCC 7310... 576 e-162 ref|ZP_07110766.1| Ribose import ATP-binding protein rbsA [Oscil... 575 e-162 ref|YP_004116312.1| ABC transporter-like protein [Pantoea sp. At... 566 e-159 ref|YP_003502324.1| ribose import ATP-binding protein rbsA 2 [Es... 553 e-155 >ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62247.1| ABC-type sugar transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 521 Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/521 (99%), Positives = 519/521 (99%) Query: 22 MTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQ 81 MTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQ Sbjct: 1 MTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQ 60 Query: 82 GEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAM 141 GEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAM Sbjct: 61 GEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAM 120 Query: 142 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE 201 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE Sbjct: 121 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE 180 Query: 202 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMV 261 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGEL RDEIDSERIVQMMV Sbjct: 181 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMV 240 Query: 262 GRSLSEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTE 321 GRSLSEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTE Sbjct: 241 GRSLSEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTE 300 Query: 322 LARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATM 381 LARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATM Sbjct: 301 LARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATM 360 Query: 382 NVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAP 441 NVASRHTRLGLVRSRSL GVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAP Sbjct: 361 NVASRHTRLGLVRSRSLGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAP 420 Query: 442 KVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMIT 501 KVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMIT Sbjct: 421 KVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMIT 480 Query: 502 GELAGAAITQENIMRLATDTNVPRTAPASHSSPTPLAPSHG 542 GELAGAAITQENIMRLATDTNVPRTAPASHSSPTPLAPSHG Sbjct: 481 GELAGAAITQENIMRLATDTNVPRTAPASHSSPTPLAPSHG 521 >ref|YP_004154959.1| ABC transporter [Variovorax paradoxus EPS] gb|ADU36848.1| ABC transporter related protein [Variovorax paradoxus EPS] Length = 512 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 323/500 (64%), Positives = 393/500 (78%), Gaps = 8/500 (1%) Query: 27 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILL 86 +L+M GI K FGAT AL DMHL +RPGEIHALMGENGAGKSTLMK+LSGV+ PD G+I L Sbjct: 14 VLEMSGIHKRFGATRALHDMHLQVRPGEIHALMGENGAGKSTLMKILSGVYQPDAGQIRL 73 Query: 87 DGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRTD 146 G PVA+R P + AGINLIYQEL++A +++VA NVFMG+E R L L+D A M T+ Sbjct: 74 AGEPVAIRSPAHGQRAGINLIYQELSIARHLTVAENVFMGNEPRAALWLVDRARMLRETE 133 Query: 147 AVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNV 206 VL+QLGA FGA AGRLSIAEQQQVEIARALVH+ RI+IMDEPTAALS+RET LF V Sbjct: 134 RVLQQLGAQFGADWPAGRLSIAEQQQVEIARALVHKGRILIMDEPTAALSDRETAHLFRV 193 Query: 207 VRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVGRSLS 266 +R+LRD G+AIIYISHRMAEV ALADRVTVLRDG V +LARDEID +RIVQMMVGR+L+ Sbjct: 194 MRQLRDAGIAIIYISHRMAEVTALADRVTVLRDGCHVADLARDEIDEQRIVQMMVGRALT 253 Query: 267 EFYQHQRIAPADAAQLP--TVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTELAR 324 +FYQH+ + P ++++R ++G + RP+S V AGEVLG AGLVGAGR+ELAR Sbjct: 254 DFYQHR------GQRKPGRVMLELRDVSGPRNRPSSLKVHAGEVLGLAGLVGAGRSELAR 307 Query: 325 LLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNVA 384 L GAD R+GG IL++G+PV + +P A+R G+ YVPEDRKGQGLFLQ++ N +NV Sbjct: 308 LAVGADARTGGTILVDGKPVDVRRPLDAIRLGLGYVPEDRKGQGLFLQLSALTNVAINVL 367 Query: 385 SRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKVL 444 RH G++ +L + R AI RLNVK++ P+ VG LSGGNQQK+LLARWLEI P+VL Sbjct: 368 PRHAVAGVLNHGALDRLTRQAIARLNVKISGPQGIVGALSGGNQQKLLLARWLEIQPRVL 427 Query: 445 ILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMITGEL 504 ILDEPTRGVD+ AKSEIY+++ L+ GVAVVVISSELPE++G+CDRVLVMREG I GEL Sbjct: 428 ILDEPTRGVDVGAKSEIYKIIGELSEAGVAVVVISSELPEIVGVCDRVLVMREGAIAGEL 487 Query: 505 AGAAITQENIMRLATDTNVP 524 AG ITQENI++LA + P Sbjct: 488 AGDRITQENIIQLAVNAPEP 507 >ref|YP_004846474.1| ribose ABC transporter ATP-binding protein [Pseudogulbenkiania sp. NH8B] dbj|BAK76060.1| ribose ABC transporter, ATP-binding protein [Pseudogulbenkiania sp. NH8B] Length = 497 Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust. Identities = 314/492 (63%), Positives = 381/492 (77%), Gaps = 4/492 (0%) Query: 28 LQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLD 87 L+M GI K FGA AL + LT E+ ALMGENGAGKSTLMK+LSGV+ PD+GEI LD Sbjct: 6 LEMMGIGKRFGANKALDQVRLTAYRHEVLALMGENGAGKSTLMKILSGVYQPDEGEIRLD 65 Query: 88 GRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRTDA 147 G+PV + P +RAAGINLIYQELAVAPN++VA N+FMG+E R R G IDH AM R + Sbjct: 66 GKPVRIASPADARAAGINLIYQELAVAPNLTVAENIFMGAEPRARFGRIDHDAMNRRAEE 125 Query: 148 VLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVV 207 VL +LGA F A+ A RL IA+QQQVEIARAL+H SR++I+DEPTAALS+RE+E+LF V+ Sbjct: 126 VLARLGARFSATTPAHRLGIADQQQVEIARALIHDSRVLILDEPTAALSDRESERLFEVI 185 Query: 208 RRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVGRSLSE 267 +LRD+G+A+IYISHRM EV LADR+ VLRDGS+VG + R E +++VQMMVGR L + Sbjct: 186 HQLRDDGIALIYISHRMEEVNRLADRIAVLRDGSYVGSMTRAESTPQKVVQMMVGRPLDD 245 Query: 268 FYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTELARLLF 327 FYQH+ ++ P ++V+ L ++RPAS VRAGEVLG AGLVGAGRTELARL+F Sbjct: 246 FYQHK----SEVGAGPVRLEVQDLGSHRVRPASLKVRAGEVLGLAGLVGAGRTELARLIF 301 Query: 328 GADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNVASRH 387 GAD R+ G ILL+GR V I +P A+R GI Y+PEDRKGQGLFLQ++ AN TMNV RH Sbjct: 302 GADARTSGRILLDGREVSIREPLDAIRLGIGYLPEDRKGQGLFLQLSATANTTMNVLGRH 361 Query: 388 TRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKVLILD 447 R G++ +L+ + + AI RL VKV+ E VG LSGGNQQK+LLARWL I PKVLILD Sbjct: 362 ARAGVLDHPALKKLTQQAIDRLAVKVSGTEGIVGGLSGGNQQKLLLARWLAIKPKVLILD 421 Query: 448 EPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMITGELAGA 507 EPTRGVDI AK EIY++VH LA+QGVAV+ ISSELPEVIG+C RVLVMREG + GELAG Sbjct: 422 EPTRGVDIGAKVEIYRIVHELAAQGVAVICISSELPEVIGLCHRVLVMREGSLAGELAGE 481 Query: 508 AITQENIMRLAT 519 A+TQE IM LAT Sbjct: 482 AVTQEAIMTLAT 493 >ref|ZP_03699692.1| ABC transporter related protein [Lutiella nitroferrum 2002] gb|EEG07374.1| ABC transporter related protein [Lutiella nitroferrum 2002] Length = 497 Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust. Identities = 313/492 (63%), Positives = 381/492 (77%), Gaps = 4/492 (0%) Query: 28 LQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLD 87 L+M GI K FGA AL + LT E+ ALMGENGAGKSTLMK+LSGV+ PD+GEI LD Sbjct: 6 LEMMGIGKRFGANKALDQVRLTAYRHEVLALMGENGAGKSTLMKILSGVYQPDEGEIRLD 65 Query: 88 GRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRTDA 147 G+PV + P +RAAGINLIYQELAVAPN++VA N+FMG+E R R G IDH AM R + Sbjct: 66 GKPVRIASPADARAAGINLIYQELAVAPNLTVAENIFMGAEPRARFGRIDHEAMNRRAEE 125 Query: 148 VLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVV 207 VL +LGA F A+ A RL IA+QQQVEIARAL+H SR++I+DEPTAALS+RE+E+LF V+ Sbjct: 126 VLARLGARFSATTPAHRLGIADQQQVEIARALIHDSRVLILDEPTAALSDRESERLFEVI 185 Query: 208 RRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVGRSLSE 267 +LRD+G+A+IYISHRM EV LADR+ VLRDG +VG + R E +++VQMMVGR L++ Sbjct: 186 HQLRDDGIALIYISHRMEEVNRLADRIAVLRDGCYVGSMTRAESTPQKVVQMMVGRPLND 245 Query: 268 FYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTELARLLF 327 FYQH+ ++ P ++V+ L ++RPAS VRAGEVLG AGLVGAGRTELARL+F Sbjct: 246 FYQHK----SEVGAGPVRLEVQDLGSHRVRPASLKVRAGEVLGLAGLVGAGRTELARLIF 301 Query: 328 GADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNVASRH 387 GAD R+ G ILL+GR V I +P A+R GI Y+PEDRKGQGLFLQ++ AN TMNV RH Sbjct: 302 GADARTSGRILLDGREVAIREPLDAIRLGIGYLPEDRKGQGLFLQLSATANTTMNVLGRH 361 Query: 388 TRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKVLILD 447 R G++ +L+ + + AI RL VKV+ E VG LSGGNQQK+LLARWL I PKVLILD Sbjct: 362 ARAGVLDHPALKKLTQQAIDRLAVKVSGTEGIVGGLSGGNQQKLLLARWLAIKPKVLILD 421 Query: 448 EPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMITGELAGA 507 EPTRGVDI AK EIY++VH LA+QGVAV+ ISSELPEVIG+C RVLVMREG + GELAG Sbjct: 422 EPTRGVDIGAKVEIYRIVHELAAQGVAVICISSELPEVIGLCHRVLVMREGSLAGELAGE 481 Query: 508 AITQENIMRLAT 519 A+TQE IM LAT Sbjct: 482 AVTQEAIMTLAT 493 >ref|YP_003704664.1| ABC transporter-like protein [Truepera radiovictrix DSM 17093] gb|ADI14121.1| ABC transporter related protein [Truepera radiovictrix DSM 17093] Length = 511 Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust. Identities = 301/496 (60%), Positives = 382/496 (77%), Gaps = 5/496 (1%) Query: 24 QTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGE 83 + P+L+MRG+ K F AL + L++ GEIHALMGENGAGKSTLMK+L+G + D GE Sbjct: 15 RAPVLEMRGVSKRFPGVKALDGVDLSVYAGEIHALMGENGAGKSTLMKILAGAYTADAGE 74 Query: 84 ILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRS 143 ILLDG+ V++R P ++ G+ LIYQEL +APN++VA N+FMGSEL R L+ A M+ Sbjct: 75 ILLDGQSVSIRSPQDAKRLGVTLIYQELNLAPNLTVAENIFMGSEL-ARGALVRRAEMQR 133 Query: 144 RTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQL 203 R VLR L A FG LAG+LSIAEQQQVEIARAL+H+SR+++MDEPT ALS+RETE+L Sbjct: 134 RAGEVLRTLAASFGPQTLAGKLSIAEQQQVEIARALLHKSRVLVMDEPTTALSDRETERL 193 Query: 204 FNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVGR 263 F V+RRL+ EGLAIIYISHRMAEVY LADRV+VLRDG++VG LAR E+ S R+VQ+MVGR Sbjct: 194 FAVIRRLKAEGLAIIYISHRMAEVYELADRVSVLRDGAYVGTLARAELSSSRLVQLMVGR 253 Query: 264 SLSEFYQHQRIAPADAAQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTELA 323 L EFY+H+R + V++VR LAGGK++P SF +RAGE++G AGLVGAGRTELA Sbjct: 254 PLKEFYRHERAT----GRAEVVLEVRGLAGGKVKPTSFALRAGEIVGLAGLVGAGRTELA 309 Query: 324 RLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNV 383 RL+FGADP+S G++ L GRPV + P A+RAGI YVPE+RK QGLFL+++ N TMNV Sbjct: 310 RLIFGADPKSAGELHLSGRPVRVSSPEDAVRAGIGYVPENRKEQGLFLELSARENITMNV 369 Query: 384 ASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKV 443 ++ R G++ R+LR AI LNV+VA T LSGGNQQK+L+ARWLEI P+V Sbjct: 370 LAQDGRAGVLNFRALRARTAKAIGDLNVRVASQATKALSLSGGNQQKLLVARWLEIGPRV 429 Query: 444 LILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMITGE 503 L+LDEPTRGVD+ AK EIY++++ LA++GVA++ ISSELPE+IG+ DRVLVMREG + GE Sbjct: 430 LLLDEPTRGVDVGAKGEIYRIMNELAARGVAILFISSELPEIIGMSDRVLVMREGALAGE 489 Query: 504 LAGAAITQENIMRLAT 519 L I+QE IM LAT Sbjct: 490 LRAGEISQEAIMTLAT 505 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 15/225 (6%) Query: 48 LTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLDGRPVALRDPGASRAAGINLI 107 +R GEI L G GAG++ L +++ G GE+ L GRPV + P + AGI + Sbjct: 287 FALRAGEIVGLAGLVGAGRTELARLIFGADPKSAGELHLSGRPVRVSSPEDAVRAGIGYV 346 Query: 108 ---------YQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRTDAVLRQLGAGFGA 158 + EL+ NI++ NV R G+++ A+R+RT + L + Sbjct: 347 PENRKEQGLFLELSARENITM--NVLAQD---GRAGVLNFRALRARTAKAIGDLNVRVAS 401 Query: 159 -SDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVRRLRDEGLAI 217 + A LS QQ++ +AR L R++++DEPT + +++ ++ L G+AI Sbjct: 402 QATKALSLSGGNQQKLLVARWLEIGPRVLLLDEPTRGVDVGAKGEIYRIMNELAARGVAI 461 Query: 218 IYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVG 262 ++IS + E+ ++DRV V+R+G+ GEL EI E I+ + G Sbjct: 462 LFISSELPEIIGMSDRVLVMREGALAGELRAGEISQEAIMTLATG 506 >ref|YP_322687.1| ABC transporter-like protein [Anabaena variabilis ATCC 29413] sp|Q3MB44.1|RBSA_ANAVT RecName: Full=Ribose import ATP-binding protein RbsA gb|ABA21792.1| monosaccharide ABC transporter ATP-binding protein, CUT2 family [Anabaena variabilis ATCC 29413] Length = 517 Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust. Identities = 291/508 (57%), Positives = 381/508 (75%), Gaps = 10/508 (1%) Query: 16 DFIPVDMTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSG 75 DF P T TP+L+M+GI K F AL ++LTI PGE+HALMGENGAGKSTLMK+L+G Sbjct: 8 DFSP-PATATPVLEMQGIAKRFHGVPALQGVNLTIYPGEVHALMGENGAGKSTLMKILAG 66 Query: 76 VHAPDQGEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGL 135 + D+GEI ++G+ V + DPG +R AGINLIYQEL VAPN++V N+FMGSEL TR Sbjct: 67 AYIADEGEIRINGKGVKITDPGTARQAGINLIYQELNVAPNLTVTENIFMGSEL-TRGQF 125 Query: 136 IDHAAMRSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAAL 195 +D AM VL LGA F +D+ G L+IAEQQQVEIARAL SRI++MDEPTAAL Sbjct: 126 LDRKAMELEAQQVLASLGASFAPTDIVGTLAIAEQQQVEIARALKDNSRILVMDEPTAAL 185 Query: 196 SERETEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSER 255 S+RETE+LF V+R+LR++G+AIIYISHRM E+YALADR++VLRDG ++G L R+EI +R Sbjct: 186 SDRETERLFEVIRKLRNDGIAIIYISHRMEEIYALADRISVLRDGQYIGSLTREEISPQR 245 Query: 256 IVQMMVGRSLSEFYQHQRIAPADAAQLPTVMQVRALAGG-KIRPASFDVRAGEVLGFAGL 314 +VQMMVGRS+ +FY+HQR + P V++VR ++ G K++PASF +RAGE+LG AGL Sbjct: 246 LVQMMVGRSMQDFYEHQRQSNPG----PVVLEVRNISDGRKVQPASFQLRAGEILGLAGL 301 Query: 315 VGAGRTELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMA 374 VGAGRTE++RL+FGAD + G++ L G+ + I P A+ GI YVPEDRK QGLFL+M+ Sbjct: 302 VGAGRTEVSRLIFGADRKVSGEVFLNGKKLEIHSPSDAIAVGIGYVPEDRKDQGLFLEMS 361 Query: 375 VAANATMNVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLA 434 N +N + LG+V S+ +A A++ ++++A+ E LSGGNQQK+LLA Sbjct: 362 SRKNIGLNRLKQDANLGIVNWGSVNKIATDAVENFHIRLANLEIRAVDLSGGNQQKLLLA 421 Query: 435 RWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLV 494 RWL I P+VL+LDEPTRGVDI AKSEIY+++ L++QGVA++++SSELPE++G+ DRVLV Sbjct: 422 RWLAINPRVLMLDEPTRGVDIGAKSEIYRIISDLSAQGVAILMVSSELPEIVGLSDRVLV 481 Query: 495 MREGMITGEL---AGAAITQENIMRLAT 519 MREG + GEL G ITQENIM AT Sbjct: 482 MREGQLVGELDNSIGKEITQENIMHYAT 509 >ref|YP_001868587.1| ABC transporter [Nostoc punctiforme PCC 73102] gb|ACC83644.1| ABC transporter related [Nostoc punctiforme PCC 73102] Length = 518 Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust. Identities = 288/512 (56%), Positives = 383/512 (74%), Gaps = 16/512 (3%) Query: 14 FPDFIPVDMTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVL 73 FPD P + TP+L+M+GI K F AL +++LTI PGE+HALMGENGAGKSTLMK+L Sbjct: 9 FPD-AP---STTPVLEMQGITKRFHGVSALQNVNLTIYPGEVHALMGENGAGKSTLMKIL 64 Query: 74 SGVHAPDQGEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRL 133 +G + D+GEI ++G+P+ + DP +R AGINLIYQEL VAPN++V N+FMGSELR R Sbjct: 65 AGAYIADEGEIRINGQPLKITDPATARKAGINLIYQELNVAPNLTVTENMFMGSELR-RG 123 Query: 134 GLIDHAAMRSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTA 193 +D AM+ + VL LGA F A + G LSIAEQQQVEIARAL +SR+++MDEPTA Sbjct: 124 QFLDRKAMQLEAEQVLDSLGANFTAQTIVGTLSIAEQQQVEIARALKDKSRVLVMDEPTA 183 Query: 194 ALSERETEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDS 253 ALS+RE++ LF V+R+LR +G+AIIYISHRM E+YALADR++VLRDG ++G L R EI Sbjct: 184 ALSDRESDHLFEVIRKLRSDGIAIIYISHRMEEIYALADRISVLRDGQYIGSLTRSEISP 243 Query: 254 ERIVQMMVGRSLSEFYQHQR-IAPADAAQLPTVMQVRALAGG--KIRPASFDVRAGEVLG 310 +R+VQMMVGRS+ +FY+HQR + P P V++VR ++ KI PASF++ AGE+LG Sbjct: 244 QRLVQMMVGRSMQDFYEHQRQMNPG-----PVVLEVRNMSDARKKIEPASFELHAGEILG 298 Query: 311 FAGLVGAGRTELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLF 370 AGLVGAGRTEL+RL+FGAD ++ G++ L G+ + I+ P A+ AGI YVPEDRK QGLF Sbjct: 299 LAGLVGAGRTELSRLIFGADRKASGEVFLNGKKLEINTPSDAIAAGIGYVPEDRKDQGLF 358 Query: 371 LQMAVAANATMNVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQK 430 L+M+ N +N + + G+V S+ ++ A++ N+++A+ E LSGGNQQK Sbjct: 359 LEMSARKNIAINTLKQDAKGGIVNWPSVNRLSTEAVENFNIRLANLEIRALDLSGGNQQK 418 Query: 431 VLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICD 490 +LLARWL I P+VL+LDEPTRGVDI AKSEIY+++ LA+QGVA++++SSEL E++G+ D Sbjct: 419 LLLARWLAIKPRVLMLDEPTRGVDIGAKSEIYRIMSELAAQGVAILMVSSELSEIVGMSD 478 Query: 491 RVLVMREGMITGELAGA---AITQENIMRLAT 519 RVLVMREG + GEL G+ ITQE IM AT Sbjct: 479 RVLVMREGQLVGELDGSLGKEITQEKIMHYAT 510 >ref|ZP_07110766.1| Ribose import ATP-binding protein rbsA [Oscillatoria sp. PCC 6506] emb|CBN55924.1| Ribose import ATP-binding protein rbsA [Oscillatoria sp. PCC 6506] Length = 541 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 293/525 (55%), Positives = 377/525 (71%), Gaps = 35/525 (6%) Query: 26 PLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEIL 85 P+L+M+GI K+F AL D++LTI PGE+HALMGENGAGKSTLMK+L+G + D+GEI Sbjct: 13 PILEMQGITKTFNGFNALQDVNLTIYPGEVHALMGENGAGKSTLMKILAGAYIADRGEIR 72 Query: 86 LDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRT 145 +DG+ + + +PG +R GI +IYQEL +APN++VA N+FMGSEL LID +AMR + Sbjct: 73 IDGQAIRMTNPGQARELGIAIIYQELNLAPNLTVAENIFMGSELTKGGALIDQSAMRIKA 132 Query: 146 DAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFN 205 VL L A F A DL LSIAEQQQVEIARAL RSRI++MDEPTAALS+RETE+LF Sbjct: 133 SQVLENLDASFDAGDLVSTLSIAEQQQVEIARALKDRSRILVMDEPTAALSDRETEKLFE 192 Query: 206 VVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVGRSL 265 VV RLR EG+AIIYISHRM E+YALADRV+V+RDG ++G L + EI +ER+V+MMVGR L Sbjct: 193 VVHRLRKEGIAIIYISHRMEEIYALADRVSVIRDGGYIGSLEKSEISAERLVEMMVGRPL 252 Query: 266 SEFYQHQRIAPADAAQLPTVMQVRALAG--GKIRPASFDVRAGEVLGFAGLVGAGRTELA 323 + Y+H+R + V++V L+ K++ ASF + AGE++G AGLVGAGRTELA Sbjct: 253 QDLYEHKRQTNPGS----VVLEVTNLSDERKKVKSASFKLHAGEIVGLAGLVGAGRTELA 308 Query: 324 RLLFGADPRSGGDILLEGRPVHIDQPRAAMR--------------------------AGI 357 RL+FGADP+ G+I LEGRP++I +P A++ AGI Sbjct: 309 RLIFGADPKMSGEIKLEGRPLNISEPSNAIKSGIAYVPEDIKEQHPLNISSPDDAIEAGI 368 Query: 358 AYVPEDRKGQGLFLQMAVAANATMNVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPE 417 AYVPEDRK GLFL+M+ N T+NV R + G++ S+SL V AIQ L +++A P Sbjct: 369 AYVPEDRKNLGLFLEMSSGENITLNVLDREAKAGIINSKSLAQVVTDAIQNLGIRLASPS 428 Query: 418 TPVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVV 477 LSGGNQQK+LLARWL I PKVL+LDEPTRGVDI AKSEIY+++ LA+ GVA+++ Sbjct: 429 IRAMDLSGGNQQKLLLARWLAINPKVLLLDEPTRGVDIGAKSEIYRIISDLATNGVAILM 488 Query: 478 ISSELPEVIGICDRVLVMREGMITGELAGAA---ITQENIMRLAT 519 ISSELPE++G+ DRVL+MR G + GE+ G+ ITQENIM AT Sbjct: 489 ISSELPEIVGMSDRVLIMRAGSLVGEVGGSTGEKITQENIMAYAT 533 >ref|YP_004116312.1| ABC transporter-like protein [Pantoea sp. At-9b] gb|ADU69756.1| ABC transporter related protein [Pantoea sp. At-9b] Length = 501 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 285/499 (57%), Positives = 370/499 (74%), Gaps = 6/499 (1%) Query: 22 MTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQ 81 MT TP+L+MR I + FG+ AL + LT+ PGE+HALMGENGAGKSTLMK+L+G + Sbjct: 1 MTATPILEMRAITRRFGSFYALKGVDLTVWPGEVHALMGENGAGKSTLMKILAGAYTASS 60 Query: 82 GEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAM 141 GEIL+DG+P A++ P + AAGI LIYQE+ +APN++VA N+F+GSE+ TR GL+ M Sbjct: 61 GEILIDGQPYAIKGPKEALAAGITLIYQEINLAPNLTVAENIFLGSEI-TRAGLVKRRQM 119 Query: 142 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE 201 V+ +LGA F A+DL RLSIAEQQQVEIARAL SRI++MDEPTAALS RETE Sbjct: 120 AEEAQQVIDRLGAQFNATDLVSRLSIAEQQQVEIARALHRNSRILVMDEPTAALSNRETE 179 Query: 202 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMV 261 QLF +++RLR EG+AIIYISHRMAEVY L+DRV+VLRDG +VG L RD++++ +V+MMV Sbjct: 180 QLFALIKRLRSEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDQLNASELVRMMV 239 Query: 262 GRSLSEFYQHQRIAPADAAQLPTVMQVRALAGGK-IRPASFDVRAGEVLGFAGLVGAGRT 320 GR LS+ + R P A +L V L+ GK + P+S VRAGE++G AGLVGAGR+ Sbjct: 240 GRPLSDLFNKDRTIPFGAIRLA----VNHLSDGKKVYPSSLAVRAGEIVGLAGLVGAGRS 295 Query: 321 ELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANAT 380 ELA+L+FG SGG+I ++G V I PR A+ GI ++ E+RK QGLFL++A N Sbjct: 296 ELAQLIFGVHKPSGGEIWIDGEEVKIHSPREAIAHGIGFLTENRKEQGLFLELAAQENIV 355 Query: 381 MNVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIA 440 M R GL+ R + +A AIQ LN++V H + G LSGGNQQK+L++RW+ IA Sbjct: 356 MATLERDASYGLLNRRKGQKIASEAIQTLNIRVPHAQVRAGGLSGGNQQKLLVSRWVAIA 415 Query: 441 PKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMI 500 P++LILDEPTRGVD+ AKSEIY+++ +LA QGVA+++ISSELPEV+G+ DRV VMREG I Sbjct: 416 PRILILDEPTRGVDVGAKSEIYRMMSQLAQQGVAILMISSELPEVVGMSDRVYVMREGTI 475 Query: 501 TGELAGAAITQENIMRLAT 519 GEL+G I+QENIM LAT Sbjct: 476 AGELSGNEISQENIMTLAT 494 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 118/220 (53%), Gaps = 5/220 (2%) Query: 48 LTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILLDGRPVALRDPGASRAAGINLI 107 L +R GEI L G GAG+S L +++ GVH P GEI +DG V + P + A GI + Sbjct: 276 LAVRAGEIVGLAGLVGAGRSELAQLIFGVHKPSGGEIWIDGEEVKIHSPREAIAHGIGFL 335 Query: 108 YQ---ELAVAPNISVAANVFMGS-ELRTRLGLIDHAAMRSRTDAVLRQLGAGFGASDL-A 162 + E + ++ N+ M + E GL++ + ++ L + + A Sbjct: 336 TENRKEQGLFLELAAQENIVMATLERDASYGLLNRRKGQKIASEAIQTLNIRVPHAQVRA 395 Query: 163 GRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNVVRRLRDEGLAIIYISH 222 G LS QQ++ ++R + RI+I+DEPT + +++ ++ +L +G+AI+ IS Sbjct: 396 GGLSGGNQQKLLVSRWVAIAPRILILDEPTRGVDVGAKSEIYRMMSQLAQQGVAILMISS 455 Query: 223 RMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMVG 262 + EV ++DRV V+R+G+ GEL+ +EI E I+ + G Sbjct: 456 ELPEVVGMSDRVYVMREGTIAGELSGNEISQENIMTLATG 495 >ref|YP_003502324.1| ribose import ATP-binding protein rbsA 2 [Escherichia coli O55:H7 str. CB9615] gb|ADD59341.1| Ribose import ATP-binding protein rbsA 2 [Escherichia coli O55:H7 str. CB9615] Length = 517 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 280/502 (55%), Positives = 368/502 (73%), Gaps = 6/502 (1%) Query: 22 MTQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQ 81 M TP+L+MR I K+FG AL + LT+ PGEIHALMGENGAGKSTLMKVL+G + Sbjct: 12 MNSTPVLEMRNIAKAFGKFYALKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATS 71 Query: 82 GEILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAM 141 GEIL+DG+P +R P + +AGI LIYQE+ +APN+SVA N+F+GSEL + GL+ M Sbjct: 72 GEILIDGKPFHIRTPKDALSAGITLIYQEMQLAPNLSVAENIFLGSEL-SHGGLVQRKEM 130 Query: 142 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE 201 + V+ +LGA F ASD L+IAEQQQVEIARAL SRI++MDEPTAALS RET Sbjct: 131 LVQAQKVIDRLGAQFNASDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETH 190 Query: 202 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELARDEIDSERIVQMMV 261 +LF ++ RLRDEG+AIIYISHRMAEVY L+DRV+VLRDG +VG L RD +++ +V+MMV Sbjct: 191 RLFELIMRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDNLNAGELVRMMV 250 Query: 262 GRSLSEFYQHQRIAPADAAQLPTVMQVRALA-GGKIRPASFDVRAGEVLGFAGLVGAGRT 320 GR LS+ + +R P A+L V L GGK++P+S VR+GE++G AGLVGAGR+ Sbjct: 251 GRPLSDLFNKERDIPLGKARL----NVHHLTDGGKVQPSSLLVRSGEIVGLAGLVGAGRS 306 Query: 321 ELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANAT 380 ELA+L+FG +GG I ++G PV I PR A+ GI ++ E+RK QGLFL+MA A N T Sbjct: 307 ELAQLIFGVRKATGGMIEVDGEPVVIHSPREAIDLGIGFLTENRKEQGLFLEMAAAENIT 366 Query: 381 MNVASRHTRLGLVRSRSLRGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIA 440 M R R G++ + + ++ AI+ LN++V H + G LSGGNQQK+L++RW+ I Sbjct: 367 MATLERDARWGMLNRKKAQTISDDAIKLLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIG 426 Query: 441 PKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMI 500 P++L+LDEPTRGVD+ AKSEIY++++ +A +GVA+++ISSELPE++G+ DRV VMREG I Sbjct: 427 PRILLLDEPTRGVDVGAKSEIYRIMNEMARKGVAILMISSELPEIVGMSDRVYVMREGSI 486 Query: 501 TGELAGAAITQENIMRLATDTN 522 GEL G ITQENIM LAT N Sbjct: 487 AGELNGKNITQENIMTLATGVN 508