BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0218.p (479 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774126.1| transmembrane NAD(P) transhydrogenase subuni... 945 0.0 ref|YP_002982505.1| NAD(P)(+) transhydrogenase [Ralstonia picket... 798 0.0 ref|YP_004685086.1| NAD(P) transhydrogenase subunit beta [Cupria... 795 0.0 ref|YP_004754279.1| NAD(P) transhydrogenase subunit beta [Collim... 777 0.0 ref|ZP_07676028.1| NAD(P) transhydrogenase, beta subunit [Ralsto... 776 0.0 ref|YP_001900527.1| NAD(P)(+) transhydrogenase [Ralstonia picket... 775 0.0 ref|YP_299910.1| NAD(P) transhydrogenase subunit beta [Ralstonia... 774 0.0 ref|YP_293524.1| NAD(P) transhydrogenase, beta subunit [Ralstoni... 772 0.0 ref|YP_725367.1| NAD(P) transhydrogenase subunit beta [Ralstonia... 762 0.0 emb|CCA81588.1| NAD(P) transhydrogenase subunit beta [blood dise... 761 0.0 >ref|YP_003774126.1| transmembrane NAD(P) transhydrogenase subunit beta [Herbaspirillum seropedicae SmR1] gb|ADJ62218.1| transmembrane NAD(P) transhydrogenase (beta subunit) protein [Herbaspirillum seropedicae SmR1] Length = 479 Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/478 (99%), Positives = 477/478 (99%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGEGG 60 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGEGG Sbjct: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGEGG 60 Query: 61 NPSGDIGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAAVAEP 120 NPSGDIGYLLVAGGVIVGGG+GAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAAVAEP Sbjct: 61 NPSGDIGYLLVAGGVIVGGGIGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAAVAEP 120 Query: 121 WALGISAHGQLIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVNFAGQ 180 WALGISAHGQLIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVNFAGQ Sbjct: 121 WALGISAHGQLIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVNFAGQ 180 Query: 181 HFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVSMLNSY 240 HFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVSMLNSY Sbjct: 181 HFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVSMLNSY 240 Query: 241 SGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGEAAAAGG 300 SGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGG+AAAAGG Sbjct: 241 SGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGDAAAAGG 300 Query: 301 GAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNGVTVKYA 360 GAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNGVTVKYA Sbjct: 301 GAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNGVTVKYA 360 Query: 361 IHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPAAKDLKS 420 IHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPAAKD KS Sbjct: 361 IHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPAAKDPKS 420 Query: 421 PIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMVKAV 478 PIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMVKAV Sbjct: 421 PIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMVKAV 478 >ref|YP_002982505.1| NAD(P)(+) transhydrogenase [Ralstonia pickettii 12D] gb|ACS63833.1| NAD(P)(+) transhydrogenase (AB-specific) [Ralstonia pickettii 12D] Length = 486 Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/486 (84%), Positives = 439/486 (90%), Gaps = 7/486 (1%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGE-- 58 MSMNLVTLLYL+AS+CFIQALKGLSHP TARRGN+FG+ GM IA +TT+ALI K+K E Sbjct: 1 MSMNLVTLLYLLASVCFIQALKGLSHPTTARRGNAFGMTGMAIAAVTTIALIYKLKAEMF 60 Query: 59 GGNPSG-DIGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAAV 117 G SG G++L+ G++VGGG+GAY+AR+VEMTKMPELVAAMHSLIGLAAVCIA AAV Sbjct: 61 AGTESGASTGFILIFAGLVVGGGIGAYVARTVEMTKMPELVAAMHSLIGLAAVCIATAAV 120 Query: 118 AEPWALGISAHGQ-LIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVN 176 AEP A GI+ G ++P+GNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPV Sbjct: 121 AEPSAFGITVAGDNVLPLGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVQ 180 Query: 177 FAGQHFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVSM 236 FAGQH LNLLLAVAM+GFGI+F L+Q+WLPFIIM AIAF LGVLIIIPIGGADMPVVVSM Sbjct: 181 FAGQHMLNLLLAVAMLGFGILFFLSQSWLPFIIMTAIAFVLGVLIIIPIGGADMPVVVSM 240 Query: 237 LNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGF--GGE 294 LNSYSGWAAAGIGFSLNN MLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGF Sbjct: 241 LNSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGSEAS 300 Query: 295 AAAAGGGAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNG 354 A AA GG+ QQR VKSGS DDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKL+ G Sbjct: 301 AGAAAGGSGQQRPVKSGSPDDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLSDKG 360 Query: 355 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPA 414 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDIN EF QADVVLVLGANDVVNPA Sbjct: 361 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINGEFGQADVVLVLGANDVVNPA 420 Query: 415 AK-DLKSPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIED 473 AK D KSPIAGMPILEAYKAKT+IVNKRSM AGYAGLDNELFYMDKTMMVFGDAKKV+ED Sbjct: 421 AKNDPKSPIAGMPILEAYKAKTIIVNKRSMNAGYAGLDNELFYMDKTMMVFGDAKKVVED 480 Query: 474 MVKAVH 479 MVK+V Sbjct: 481 MVKSVE 486 >ref|YP_004685086.1| NAD(P) transhydrogenase subunit beta [Cupriavidus necator N-1] gb|AEI76605.1| NAD(P) transhydrogenase subunit beta [Cupriavidus necator N-1] Length = 489 Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/485 (83%), Positives = 439/485 (90%), Gaps = 8/485 (1%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGE-- 58 +SMN+VTL YL AS+CFIQALKGLSHP TARRGN+FG+AGM++A LTT+ALI K+K E Sbjct: 4 LSMNMVTLSYLGASVCFIQALKGLSHPTTARRGNTFGMAGMLVAALTTVALIFKLKSELL 63 Query: 59 --GGNPSGD-IGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVA 115 G +PS G L+ ++VGGG+GAY+A+ V+MTKMPELVAAMHSLIGLAAV I+VA Sbjct: 64 SGGADPSAPGTGLALILAALVVGGGIGAYVAKKVQMTKMPELVAAMHSLIGLAAVFISVA 123 Query: 116 AVAEPWALGISAHG-QLIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAP 174 AVAEP A GI+A G IP+GNR+ELFIG FVGAITFSGSVIAFGKL+G+YKFRLFQGAP Sbjct: 124 AVAEPAAFGITAAGSHDIPLGNRIELFIGCFVGAITFSGSVIAFGKLAGRYKFRLFQGAP 183 Query: 175 VNFAGQHFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVV 234 V FAGQH+LNLLLAVAM+GFGI F LTQ W+PF++M A+AF LGVLIIIPIGGADMPVVV Sbjct: 184 VVFAGQHWLNLLLAVAMVGFGIAFFLTQAWMPFLVMLALAFVLGVLIIIPIGGADMPVVV 243 Query: 235 SMLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGE 294 SMLNSYSGWAAAGIGFSLNN MLIIAGSLVGSSGAILSYIMC+AMNRSFFNVILGGFG + Sbjct: 244 SMLNSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVILGGFGSD 303 Query: 295 AAAAGGGA-QQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHN 353 AAAA G A Q QRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTE LTH Sbjct: 304 AAAASGPAGQAQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEVLTHR 363 Query: 354 GVTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNP 413 GVTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEF QADVVLVLGANDVVNP Sbjct: 364 GVTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFGQADVVLVLGANDVVNP 423 Query: 414 AAK-DLKSPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIE 472 AAK D KSPIAGMPILEAYKAKT+IVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKV+E Sbjct: 424 AAKNDPKSPIAGMPILEAYKAKTIIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVVE 483 Query: 473 DMVKA 477 DM+KA Sbjct: 484 DMLKA 488 >ref|YP_004754279.1| NAD(P) transhydrogenase subunit beta [Collimonas fungivorans Ter331] gb|AEK63456.1| NAD(P) transhydrogenase subunit beta [Collimonas fungivorans Ter331] Length = 478 Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/480 (88%), Positives = 446/480 (92%), Gaps = 3/480 (0%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGEGG 60 MSMNLVTLLYLIAS+CFIQALKGLSHP++ARRGN+FG+AGM IAV+TT+ALIVK+K E Sbjct: 1 MSMNLVTLLYLIASVCFIQALKGLSHPSSARRGNAFGMAGMAIAVVTTIALIVKLKAE-- 58 Query: 61 NPSGDIGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAAVAEP 120 + +G+ LVAGGV+VGGG+GA LA+ VEMTKMPELVAAMHSLIGLAAVCIAVAAV+EP Sbjct: 59 SQGAGLGFWLVAGGVVVGGGIGAMLAKRVEMTKMPELVAAMHSLIGLAAVCIAVAAVSEP 118 Query: 121 WALGISAHGQLIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVNFAGQ 180 WA GI+AHG+ +P GNR+ELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPV+F GQ Sbjct: 119 WAFGIAAHGEALPTGNRIELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVSFRGQ 178 Query: 181 HFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVSMLNSY 240 HF+NLLLAVAMIG GIIFVLTQ WLPFI+MA IAF LGVLIIIPIGGADMPVVVSMLNSY Sbjct: 179 HFINLLLAVAMIGLGIIFVLTQAWLPFILMALIAFILGVLIIIPIGGADMPVVVSMLNSY 238 Query: 241 SGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVIL-GGFGGEAAAAG 299 SGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVIL G G AAA G Sbjct: 239 SGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGDAAAATG 298 Query: 300 GGAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNGVTVKY 359 G AQQQR VKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTH GV VKY Sbjct: 299 GAAQQQRPVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHKGVIVKY 358 Query: 360 AIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPAAKDLK 419 AIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDIN EFAQADVVLVLGANDVVNPAAKD K Sbjct: 359 AIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINGEFAQADVVLVLGANDVVNPAAKDPK 418 Query: 420 SPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMVKAVH 479 S IAGMPILE YKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMVKAV Sbjct: 419 SSIAGMPILEVYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMVKAVE 478 >ref|ZP_07676028.1| NAD(P) transhydrogenase, beta subunit [Ralstonia sp. 5_7_47FAA] gb|EFP65366.1| NAD(P) transhydrogenase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 486 Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/486 (84%), Positives = 440/486 (90%), Gaps = 7/486 (1%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGE-- 58 MSMNLVTLLYL+AS+CFIQALKGLSHP TARRGN+FG+ GM IA +TT+ALI K+K E Sbjct: 1 MSMNLVTLLYLLASVCFIQALKGLSHPTTARRGNAFGMTGMAIAAVTTIALIYKLKAEMF 60 Query: 59 GGNPSG-DIGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAAV 117 G SG G++L+ G++VGGG+GAY+AR+VEMTKMPELVAAMHSLIGLAAVCIAVAAV Sbjct: 61 AGTESGTSTGFILIFAGLVVGGGIGAYVARTVEMTKMPELVAAMHSLIGLAAVCIAVAAV 120 Query: 118 AEPWALGISAHGQ-LIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVN 176 AEP A GI+ G ++P+GNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPV Sbjct: 121 AEPSAFGITVAGDNVLPLGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVQ 180 Query: 177 FAGQHFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVSM 236 FAGQH LNLLLAVAM+GFGI+F L+Q+WLPFIIM AIAF LGVLIIIPIGGADMPVVVSM Sbjct: 181 FAGQHMLNLLLAVAMLGFGILFFLSQSWLPFIIMTAIAFVLGVLIIIPIGGADMPVVVSM 240 Query: 237 LNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGF--GGE 294 LNSYSGWAAAGIGFSLNN MLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGF Sbjct: 241 LNSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGSEAS 300 Query: 295 AAAAGGGAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNG 354 A AA GG+ QQR VKSGS DDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKL+ G Sbjct: 301 AGAAAGGSGQQRPVKSGSPDDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLSDKG 360 Query: 355 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPA 414 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDIN EF QADVVLVLGANDVVNPA Sbjct: 361 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINGEFGQADVVLVLGANDVVNPA 420 Query: 415 AK-DLKSPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIED 473 AK D KSPIAGMPILEAYKAKT+IVNKRSM AGYAGLDNELFYMDKTMMVFGDAKKV+ED Sbjct: 421 AKNDPKSPIAGMPILEAYKAKTIIVNKRSMNAGYAGLDNELFYMDKTMMVFGDAKKVVED 480 Query: 474 MVKAVH 479 MVK+V Sbjct: 481 MVKSVE 486 >ref|YP_001900527.1| NAD(P)(+) transhydrogenase [Ralstonia pickettii 12J] gb|ACD28095.1| NAD(P)(+) transhydrogenase (AB-specific) [Ralstonia pickettii 12J] Length = 486 Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/486 (84%), Positives = 439/486 (90%), Gaps = 7/486 (1%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGE-- 58 MSMNLVTLLYL+AS+CFIQALKGLSHP TARRGN+FG+ GM IA +TT+ALI K+K E Sbjct: 1 MSMNLVTLLYLLASVCFIQALKGLSHPTTARRGNAFGMTGMAIAAVTTVALIYKLKAEMF 60 Query: 59 GGNPSG-DIGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAAV 117 G SG G++L+ G++VGGG+GAY+AR+VEMTKMPELVAAMHSLIGLAAVCIAVAAV Sbjct: 61 AGTESGTSTGFILIFAGLVVGGGIGAYVARTVEMTKMPELVAAMHSLIGLAAVCIAVAAV 120 Query: 118 AEPWALGISAHGQ-LIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVN 176 AEP A GI+ G ++P+GNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPV Sbjct: 121 AEPSAFGITMAGDNVLPLGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVQ 180 Query: 177 FAGQHFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVSM 236 FAGQH LNLLLAVAM+GFGI+F L+Q+WLPFIIM AIAF LGVLIIIPIGGADMPVVVSM Sbjct: 181 FAGQHMLNLLLAVAMLGFGILFFLSQSWLPFIIMTAIAFVLGVLIIIPIGGADMPVVVSM 240 Query: 237 LNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGF--GGE 294 LNSYSGWAAAGIGFSLNN MLIIAGSLVGSSGAILSYIMC+AMNRSFFNVILGGF Sbjct: 241 LNSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVILGGFGSEAS 300 Query: 295 AAAAGGGAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNG 354 A AA GG QQR VKSGS DDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKL+ G Sbjct: 301 AGAAAGGGGQQRPVKSGSPDDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLSDKG 360 Query: 355 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPA 414 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDIN EF QADVVLVLGANDVVNPA Sbjct: 361 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINGEFGQADVVLVLGANDVVNPA 420 Query: 415 AK-DLKSPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIED 473 AK D KSPIAGMPILEAYKAKT+IVNKRSM AGYAGLDNELFYMDKTMMVFGDAKKV+ED Sbjct: 421 AKNDPKSPIAGMPILEAYKAKTIIVNKRSMNAGYAGLDNELFYMDKTMMVFGDAKKVVED 480 Query: 474 MVKAVH 479 MVK+V Sbjct: 481 MVKSVE 486 >ref|YP_299910.1| NAD(P) transhydrogenase subunit beta [Ralstonia eutropha JMP134] gb|AAZ65066.1| NAD(P) transhydrogenase, beta subunit [Ralstonia eutropha JMP134] Length = 489 Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/486 (82%), Positives = 436/486 (89%), Gaps = 7/486 (1%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGE-- 58 +SMN VTL YL AS+CFIQALKGLSHPA+AR+GN+FG+ GM +A LTT+ALI+K+K E Sbjct: 4 LSMNTVTLFYLGASVCFIQALKGLSHPASARKGNAFGMIGMAVAALTTVALILKLKNEFL 63 Query: 59 --GGNPSGDIGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAA 116 G + G L+ G++VGGG+GAY+A+ VEMTKMPELVAAMHSLIGLAAVCIAVAA Sbjct: 64 AAGNGTTAGSGLALILAGLVVGGGIGAYVAKKVEMTKMPELVAAMHSLIGLAAVCIAVAA 123 Query: 117 VAEPWALGISAHG-QLIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPV 175 VAEP A GI+ G IP+GNR+ELFIG FVGAITFSGSVIAFGKL+G+YKFRLFQGAPV Sbjct: 124 VAEPSAFGIAPAGSHEIPMGNRIELFIGCFVGAITFSGSVIAFGKLAGRYKFRLFQGAPV 183 Query: 176 NFAGQHFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVS 235 FAGQH LNL LAVAM+GFGI F +TQ W PF++M AIAF LGVLIIIPIGGADMPVVVS Sbjct: 184 VFAGQHMLNLALAVAMVGFGIAFFMTQEWTPFLVMLAIAFVLGVLIIIPIGGADMPVVVS 243 Query: 236 MLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGEA 295 MLNSYSGWAAAGIGFSLNN MLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFG +A Sbjct: 244 MLNSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGSDA 303 Query: 296 -AAAGGGAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNG 354 A+A GG+Q QRNVKSGSADDA+FLMGNAETVIIVPGYGLAVARAQHALKELTEKLT G Sbjct: 304 GASAAGGSQVQRNVKSGSADDASFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTEKG 363 Query: 355 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPA 414 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEF QADVVLVLGANDVVNP+ Sbjct: 364 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFGQADVVLVLGANDVVNPS 423 Query: 415 AK-DLKSPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIED 473 AK D KSPIAGMPILEAYKAKT+IVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKV+ED Sbjct: 424 AKTDPKSPIAGMPILEAYKAKTIIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVVED 483 Query: 474 MVKAVH 479 MVKAV Sbjct: 484 MVKAVE 489 >ref|YP_293524.1| NAD(P) transhydrogenase, beta subunit [Ralstonia eutropha JMP134] ref|YP_299480.1| NAD(P) transhydrogenase subunit beta [Ralstonia eutropha JMP134] gb|AAZ64636.1| NAD(P) transhydrogenase, beta subunit [Ralstonia eutropha JMP134] gb|AAZ65667.1| NAD(P) transhydrogenase, beta subunit [Ralstonia eutropha JMP134] Length = 488 Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/484 (83%), Positives = 435/484 (89%), Gaps = 7/484 (1%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGE-- 58 +SMN VTL YL AS+CFIQALKGLSHPA+AR+GN+FG+ GM +A LTT+ALI+K+K E Sbjct: 4 LSMNTVTLFYLGASVCFIQALKGLSHPASARKGNAFGMIGMAVAALTTVALILKLKNEFL 63 Query: 59 --GGNPSGDIGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAA 116 G + G L+ G++VGGG+GAY+A+ VEMTKMPELVAAMHSLIGLAAVCIAVAA Sbjct: 64 AAGSGTTAGSGLALILAGLVVGGGIGAYVAKKVEMTKMPELVAAMHSLIGLAAVCIAVAA 123 Query: 117 VAEPWALGISAHG-QLIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPV 175 VAEP A GI+ G IP+GNR+ELFIG FVGAITFSGSVIAFGKL+G+YKFRLFQGAPV Sbjct: 124 VAEPSAFGIAPAGSHEIPMGNRIELFIGCFVGAITFSGSVIAFGKLAGRYKFRLFQGAPV 183 Query: 176 NFAGQHFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVS 235 FAGQH LNL LAVAM+GFGI F +TQ W PF++M AIAF LGVLIIIPIGGADMPVVVS Sbjct: 184 VFAGQHMLNLALAVAMVGFGIAFFMTQEWTPFLVMLAIAFVLGVLIIIPIGGADMPVVVS 243 Query: 236 MLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGEA 295 MLNSYSGWAAAGIGFSLNN MLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFG +A Sbjct: 244 MLNSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGSDA 303 Query: 296 -AAAGGGAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNG 354 A+A GG+Q QRNVKSGSADDA+FLMGNAETVIIVPGYGLAVARAQHALKELTEKLT G Sbjct: 304 GASAAGGSQVQRNVKSGSADDASFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTEKG 363 Query: 355 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPA 414 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEF QADVVLVLGANDVVNP+ Sbjct: 364 VTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFGQADVVLVLGANDVVNPS 423 Query: 415 AK-DLKSPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIED 473 AK D KSPIAGMPILEAYKAKT+IVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKV+ED Sbjct: 424 AKTDPKSPIAGMPILEAYKAKTIIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVVED 483 Query: 474 MVKA 477 MVKA Sbjct: 484 MVKA 487 >ref|YP_725367.1| NAD(P) transhydrogenase subunit beta [Ralstonia eutropha H16] emb|CAJ91999.1| NAD(P) transhydrogenase subunit beta [Ralstonia eutropha H16] Length = 490 Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/485 (82%), Positives = 432/485 (89%), Gaps = 8/485 (1%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGE-- 58 +SMN+VTL YL AS+CFIQALKGLSHP TARRGN FG+AGMV+A LTT+ALI K+K Sbjct: 4 LSMNMVTLSYLGASVCFIQALKGLSHPTTARRGNVFGMAGMVVAALTTVALIFKLKSGLF 63 Query: 59 --GGNPSGD-IGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVA 115 G +PS G L+ ++VGGG+GAY+A+ V+MTKMPELVAAMHSLIGLAAV I+VA Sbjct: 64 SGGADPSAPGTGLALILAALVVGGGIGAYVAKKVQMTKMPELVAAMHSLIGLAAVFISVA 123 Query: 116 AVAEPWALGISAHG-QLIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAP 174 AVAEP A GI+A G IP+GNR+ELFIG FVGAITFSGSVIAFGKL+G+YKFRLFQGAP Sbjct: 124 AVAEPAAFGITAAGSHDIPLGNRIELFIGCFVGAITFSGSVIAFGKLAGRYKFRLFQGAP 183 Query: 175 VNFAGQHFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVV 234 V FAGQH+LNLLLAVAM+GFGI F LTQ W+PF++M A+AF LGVLIIIPIGGADMPVVV Sbjct: 184 VVFAGQHWLNLLLAVAMVGFGIAFFLTQAWMPFLVMLALAFVLGVLIIIPIGGADMPVVV 243 Query: 235 SMLNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVIL-GGFGG 293 SMLNSYSGWAAAGIGFSLNN MLIIAGSLVG+SGAILSYIMCKAMNRSFFNVIL G G Sbjct: 244 SMLNSYSGWAAAGIGFSLNNPMLIIAGSLVGASGAILSYIMCKAMNRSFFNVILGGFGGD 303 Query: 294 EAAAAGGGAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHN 353 AAA+G Q QRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKL Sbjct: 304 AAAASGPAGQAQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLAEK 363 Query: 354 GVTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNP 413 GVTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEF QADVVLVLGANDVVNP Sbjct: 364 GVTVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFGQADVVLVLGANDVVNP 423 Query: 414 AAK-DLKSPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIE 472 AAK D KSPIAGMPILEAYKAKT+IVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKV+E Sbjct: 424 AAKNDPKSPIAGMPILEAYKAKTIIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVVE 483 Query: 473 DMVKA 477 DM+KA Sbjct: 484 DMLKA 488 >emb|CCA81588.1| NAD(P) transhydrogenase subunit beta [blood disease bacterium R229] Length = 485 Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/485 (84%), Positives = 442/485 (91%), Gaps = 6/485 (1%) Query: 1 MSMNLVTLLYLIASICFIQALKGLSHPATARRGNSFGIAGMVIAVLTTLALIVKIKGE-- 58 MSMNLVTLLYL+AS+CFIQALKGLSHP+TARRGN FG++GM IA +TT+ALIVK+K E Sbjct: 1 MSMNLVTLLYLLASVCFIQALKGLSHPSTARRGNVFGMSGMAIAAVTTIALIVKLKAEMF 60 Query: 59 GGNPSG-DIGYLLVAGGVIVGGGVGAYLARSVEMTKMPELVAAMHSLIGLAAVCIAVAAV 117 G SG G+LL+ G++VGGG+GAY+AR+VEMTKMPELVAAMHSLIGLAAVCIAVAAV Sbjct: 61 AGTESGTSTGFLLIFAGLVVGGGIGAYVARTVEMTKMPELVAAMHSLIGLAAVCIAVAAV 120 Query: 118 AEPWALGISAHGQ-LIPVGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVN 176 AEP A GI+ G ++P+GNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPV Sbjct: 121 AEPAAFGITLAGDNVLPLGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVQ 180 Query: 177 FAGQHFLNLLLAVAMIGFGIIFVLTQNWLPFIIMAAIAFALGVLIIIPIGGADMPVVVSM 236 FAGQH LNLLLA+AM+GFG++F L+Q+WLPFIIM AIAFALGVLIIIPIGGADMPVVVSM Sbjct: 181 FAGQHMLNLLLALAMLGFGLLFFLSQSWLPFIIMTAIAFALGVLIIIPIGGADMPVVVSM 240 Query: 237 LNSYSGWAAAGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGE-A 295 LNSYSGWAAAGIGFSLNN MLIIAGSLVGSSGAILSYIMC+AMNRSFFNV+LGGFG E + Sbjct: 241 LNSYSGWAAAGIGFSLNNPMLIIAGSLVGSSGAILSYIMCRAMNRSFFNVLLGGFGSEVS 300 Query: 296 AAAGGGAQQQRNVKSGSADDAAFLMGNAETVIIVPGYGLAVARAQHALKELTEKLTHNGV 355 A GA QQR VKSGS DDAAFL+GNAETVIIVPGYGLAVARAQHALKELTE L GV Sbjct: 301 TTAVAGAGQQRAVKSGSPDDAAFLLGNAETVIIVPGYGLAVARAQHALKELTELLAEKGV 360 Query: 356 TVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFAQADVVLVLGANDVVNPAA 415 TVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEF QADVVLVLGANDVVNPAA Sbjct: 361 TVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINSEFGQADVVLVLGANDVVNPAA 420 Query: 416 K-DLKSPIAGMPILEAYKAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDM 474 K D KSPIAGMPILEAYKAKT+IVNKRSM AGYAGLDNELFYMDKTMMVFGDAKKV+EDM Sbjct: 421 KNDPKSPIAGMPILEAYKAKTIIVNKRSMNAGYAGLDNELFYMDKTMMVFGDAKKVVEDM 480 Query: 475 VKAVH 479 VKAV Sbjct: 481 VKAVD 485