BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0207.p (243 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774117.1| biopolymer transport transmembrane protein [... 485 e-135 ref|YP_004754516.1| MotA/TolQ/ExbB proton channel family protein... 411 e-113 ref|YP_001352054.1| biopolymer transport protein ExbB [Janthinob... 405 e-111 ref|YP_001098673.1| biopolymer transport ExbB protein [Herminiim... 402 e-110 ref|ZP_08274158.1| MotA/TolQ/ExbB proton channel family protein ... 365 3e-99 ref|YP_997826.1| MotA/TolQ/ExbB proton channel [Verminephrobacte... 289 3e-76 emb|CBA26518.1| Biopolymer transport protein exbB [Curvibacter p... 288 4e-76 ref|YP_004234424.1| MotA/TolQ/ExbB proton channel [Acidovorax av... 287 9e-76 ref|ZP_01915858.1| MotA/TolQ/ExbB proton channel [Limnobacter sp... 285 3e-75 ref|ZP_08875527.1| MotA/TolQ/ExbB proton channel [Verminephrobac... 284 7e-75 >ref|YP_003774117.1| biopolymer transport transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62209.1| biopolymer transport transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 243 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD Sbjct: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60 Query: 61 TTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 TTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS Sbjct: 61 TTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 Query: 121 GKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 GKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL Sbjct: 121 GKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV 240 GLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV Sbjct: 181 GLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV 240 Query: 241 GRA 243 GRA Sbjct: 241 GRA 243 >ref|YP_004754516.1| MotA/TolQ/ExbB proton channel family protein [Collimonas fungivorans Ter331] gb|AEK63693.1| MotA/TolQ/ExbB proton channel family protein [Collimonas fungivorans Ter331] Length = 246 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 204/245 (83%), Positives = 224/245 (91%), Gaps = 7/245 (2%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60 MEVSPYGLE+LW+QGDFV K VAVLL+AMSIASWYVI+TKALQ+LR ++A+ AAGHQFWD Sbjct: 1 MEVSPYGLEALWSQGDFVIKSVAVLLVAMSIASWYVILTKALQILRFQRAAHAAGHQFWD 60 Query: 61 TTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 TT+LPEG+ATLG +NPFAEVA+AGV++M HH AHKGHLHDQLSVSDWVTLSLRQAIDE S Sbjct: 61 TTSLPEGIATLGTENPFAEVAQAGVSSMRHHAAHKGHLHDQLSVSDWVTLSLRQAIDEVS 120 Query: 121 GKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 GKLQ GMAVLASVGSTAPFVGLFGTVWGIYHALVSIGT+GQASIDKVAGPVGEALIMTAL Sbjct: 121 GKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTSGQASIDKVAGPVGEALIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGED-----GQPNGGKA 235 GLAVAIPATFGYNALVRGNKTI+AKLNKFGFDLHALFVTG+R++ + G NG A Sbjct: 181 GLAVAIPATFGYNALVRGNKTIIAKLNKFGFDLHALFVTGSRSSSNEADHANGSNNG--A 238 Query: 236 KLTAV 240 KL AV Sbjct: 239 KLVAV 243 >ref|YP_001352054.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille] gb|ABR90101.1| biopolymer transport protein ExbB [Janthinobacterium sp. Marseille] Length = 242 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 199/243 (81%), Positives = 220/243 (90%), Gaps = 1/243 (0%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60 MEVSPYGLESLW+QGDFVTKGVAVLL+AMSIASWYVI TKALQL++ R+A+ AAGH+FWD Sbjct: 1 MEVSPYGLESLWSQGDFVTKGVAVLLVAMSIASWYVIATKALQLMQYRRAARAAGHEFWD 60 Query: 61 TTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 T+L EG ATLG NPFA++A+AGVTAM HH AHKGHLHDQLSVSDW+TLSLRQAIDE S Sbjct: 61 ATSLTEGTATLGNGNPFADIAEAGVTAMRHHEAHKGHLHDQLSVSDWITLSLRQAIDETS 120 Query: 121 GKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 KLQ+GMAVLASVGSTAPFVGLFGTVWGIYHALV+IGT+GQASIDKVAGPVGEALIMTAL Sbjct: 121 AKLQSGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGPVGEALIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV 240 GLAVAIPATFGYNALVRGNK+++AK+NKFGFDLHALFVTG+R A + P AKL AV Sbjct: 181 GLAVAIPATFGYNALVRGNKSVIAKMNKFGFDLHALFVTGSR-ANDTNTPGASGAKLVAV 239 Query: 241 GRA 243 G A Sbjct: 240 GGA 242 >ref|YP_001098673.1| biopolymer transport ExbB protein [Herminiimonas arsenicoxydans] emb|CAL60544.1| Biopolymer transport exbB protein [Herminiimonas arsenicoxydans] Length = 242 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 198/243 (81%), Positives = 218/243 (89%), Gaps = 1/243 (0%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60 MEVSPYGLESLW+QGDFVTKGVA+LL+AMSIASWYVI TKALQL++ R+A+ AAGH+FWD Sbjct: 1 MEVSPYGLESLWSQGDFVTKGVAILLVAMSIASWYVIATKALQLMQYRRAARAAGHEFWD 60 Query: 61 TTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 T+L EG ATLG NPFA +A+AGVTAM HH AHKGHLHD+LSVSDW+TLSLRQAIDE S Sbjct: 61 ATSLSEGTATLGSGNPFASIAEAGVTAMRHHEAHKGHLHDELSVSDWITLSLRQAIDETS 120 Query: 121 GKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 KLQ GMAVLASVGSTAPFVGLFGTVWGIYHALV+IGT+GQASIDKVAGPVGEALIMTAL Sbjct: 121 AKLQTGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQASIDKVAGPVGEALIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDGQPNGGKAKLTAV 240 GLAVAIPATFGYNALVRGNK+++AK+NKFGFDLHALFVTGAR A + P AKL AV Sbjct: 181 GLAVAIPATFGYNALVRGNKSLIAKMNKFGFDLHALFVTGAR-ANDTNTPGASGAKLVAV 239 Query: 241 GRA 243 G A Sbjct: 240 GGA 242 >ref|ZP_08274158.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32371.1| MotA/TolQ/ExbB proton channel family protein [Oxalobacteraceae bacterium IMCC9480] Length = 238 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 175/230 (76%), Positives = 205/230 (89%), Gaps = 1/230 (0%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60 MEVSPYGLESLW QGD V K VA+LL+AMS+ASW+VIIT+ +QLLRLR+++A G +FWD Sbjct: 1 MEVSPYGLESLWQQGDIVIKAVALLLIAMSVASWFVIITRGVQLLRLRRSAALVGLRFWD 60 Query: 61 TTNLPEGVATLGQDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEAS 120 +++ +GV LG+DNPFAE+A+AG AM+HH H+GHLHDQLS SDWVT+SLRQ ID+A+ Sbjct: 61 ASSMAQGVERLGRDNPFAELAQAGSAAMAHHATHQGHLHDQLSKSDWVTMSLRQGIDDAA 120 Query: 121 GKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTAL 180 G+LQ GMAVLASVGSTAPFVGLFGTVWGIYHALV+IGT+GQA IDKVAGPVGE+LIMTAL Sbjct: 121 GRLQQGMAVLASVGSTAPFVGLFGTVWGIYHALVAIGTSGQAGIDKVAGPVGESLIMTAL 180 Query: 181 GLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDGQP 230 GLAVAIPATFGYNALVRGNK+ LA+LNKFGFDLHA FVTGAR +G+D P Sbjct: 181 GLAVAIPATFGYNALVRGNKSTLAQLNKFGFDLHAWFVTGAR-SGQDTPP 229 >ref|YP_997826.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2] gb|ABM58808.1| MotA/TolQ/ExbB proton channel [Verminephrobacter eiseniae EF01-2] Length = 239 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 144/230 (62%), Positives = 175/230 (76%), Gaps = 5/230 (2%) Query: 4 SPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWDTTN 63 S +G+ ++W QGDFVT+ VA +LLAMS+ASW VI+ KAL L+R K A A FW + + Sbjct: 3 SQFGIANVWIQGDFVTRAVATMLLAMSLASWIVILLKALDLIRFNK-QARAAQDFWHSED 61 Query: 64 LPEGVATLGQD--NPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEASG 121 G+ LG D NPF ++A+ G A +HH + HLHDQL +SDWVT LR ID + Sbjct: 62 FAAGLTQLGTDPHNPFLQLAREGREATAHHRNTQAHLHDQLDMSDWVTRCLRNCIDAFTA 121 Query: 122 KLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTALG 181 +LQ+G+A+LASVGSTAPF+GLFGTVWGIYHAL+SIGT+GQ++IDKVAGP+GEALIMTALG Sbjct: 122 RLQSGLAILASVGSTAPFIGLFGTVWGIYHALLSIGTSGQSTIDKVAGPIGEALIMTALG 181 Query: 182 LAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGAR--AAGEDGQ 229 LAVAIPA GYNALVRGNK+IL LN F DLHA FVTGAR AAG G+ Sbjct: 182 LAVAIPAVLGYNALVRGNKSILGSLNSFAHDLHAYFVTGARVSAAGAPGK 231 >emb|CBA26518.1| Biopolymer transport protein exbB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 239 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 143/227 (62%), Positives = 174/227 (76%), Gaps = 3/227 (1%) Query: 4 SPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWDTTN 63 S GL +LW QGD+VTK VAVLLL MS+ASW VI+ K L +L+ K+ AA FW + Sbjct: 3 SQLGLITLWTQGDWVTKSVAVLLLGMSLASWIVILIKTLDILKF-KSLAARTEYFWHSAE 61 Query: 64 LPEGVATLG--QDNPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEASG 121 EG+ TLG DNPF ++A+AG A +HH + LHD L +SDW++ SLR +ID+++ Sbjct: 62 FEEGIDTLGAPTDNPFVQLARAGQEATAHHRNTQTQLHDALDISDWISRSLRNSIDDSTA 121 Query: 122 KLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTALG 181 + Q+G+AVLASVGSTAPFVGLFGTVWGIYHAL+ IG +GQA+IDKVAGP+GEALIMTALG Sbjct: 122 RFQSGLAVLASVGSTAPFVGLFGTVWGIYHALMGIGASGQATIDKVAGPIGEALIMTALG 181 Query: 182 LAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDG 228 LAVAIPA GYNALVRGNK+IL KLN+F DLHA FVTGAR + G Sbjct: 182 LAVAIPAVLGYNALVRGNKSILTKLNRFAHDLHAYFVTGARVSNSQG 228 >ref|YP_004234424.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX45857.1| MotA/TolQ/ExbB proton channel [Acidovorax avenae subsp. avenae ATCC 19860] Length = 238 Score = 287 bits (735), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 142/228 (62%), Positives = 172/228 (75%), Gaps = 3/228 (1%) Query: 4 SPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWDTTN 63 S +G+ ++W QGDFVT+ VAVLLL MS+ASW VI+ KAL +++ +K A A FW + + Sbjct: 3 SHFGIANVWIQGDFVTRAVAVLLLGMSLASWIVILIKALDIIKFKK-HARAARDFWHSED 61 Query: 64 LPEGVATLGQD--NPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEASG 121 G+ LG D NPF +A G A +HH K HLHD L VSDW+T SLR IDE + Sbjct: 62 FAAGMEKLGSDADNPFRHLALEGREATAHHRNTKAHLHDSLDVSDWITRSLRNCIDEFTA 121 Query: 122 KLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTALG 181 +LQ+G+A+LASVGSTAPF+GLFGTVWGIYHALV+IGT+GQ++IDKVAGP+GEALIMTALG Sbjct: 122 RLQSGLAILASVGSTAPFIGLFGTVWGIYHALVAIGTSGQSTIDKVAGPIGEALIMTALG 181 Query: 182 LAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGARAAGEDGQ 229 LAVAIPA GYNALVRGNK+IL LN F DLHA FVTGAR + Q Sbjct: 182 LAVAIPAVLGYNALVRGNKSILNGLNSFAHDLHAYFVTGARVSAPADQ 229 >ref|ZP_01915858.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105] gb|EDM82887.1| MotA/TolQ/ExbB proton channel [Limnobacter sp. MED105] Length = 239 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 141/223 (63%), Positives = 179/223 (80%), Gaps = 3/223 (1%) Query: 1 MEVSPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWD 60 ME +PYG+ ++WAQGD+V K VA+LLL MSIASWYVIIT++++L RLRK + A +FW Sbjct: 1 MENNPYGIAAMWAQGDWVIKSVALLLLIMSIASWYVIITRSIRLYRLRK-NVGAVDKFWH 59 Query: 61 TTNLPEGVATLGQD--NPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDE 118 T + EG+ LG+D NPF +A G A++HH+ +K LH Q+S++DW++ +LR A+DE Sbjct: 60 THSFAEGLQVLGKDTGNPFHHMAIEGQAAVNHHSTNKDDLHGQISLADWLSEALRGAMDE 119 Query: 119 ASGKLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMT 178 A+ KLQ+G+++LASVGSTAPFVGLFGTVWGIYHALV IG +GQASIDKVAGPVGEALIMT Sbjct: 120 AAEKLQSGLSILASVGSTAPFVGLFGTVWGIYHALVGIGVSGQASIDKVAGPVGEALIMT 179 Query: 179 ALGLAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGA 221 A GLAVAIPA GYNAL R NK +L+KLN+F LHA F+TG+ Sbjct: 180 AFGLAVAIPAVLGYNALTRANKGLLSKLNRFARQLHAYFLTGS 222 >ref|ZP_08875527.1| MotA/TolQ/ExbB proton channel [Verminephrobacter sp. At4] Length = 238 Score = 284 bits (727), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 143/227 (62%), Positives = 175/227 (77%), Gaps = 5/227 (2%) Query: 4 SPYGLESLWAQGDFVTKGVAVLLLAMSIASWYVIITKALQLLRLRKASAAAGHQFWDTTN 63 S +G+ ++W QGDFVT+ VA+ LL MS+A+W VI+ K L ++R +K + AA FW + N Sbjct: 3 SQFGIANVWIQGDFVTRTVAIGLLLMSLATWIVILVKTLDIIRFKKHARAA-RDFWHSEN 61 Query: 64 LPEGVATLGQD--NPFAEVAKAGVTAMSHHTAHKGHLHDQLSVSDWVTLSLRQAIDEASG 121 L G++ LG NPF ++A G A +HH + HLHD L VSDWVT LR IDE + Sbjct: 62 LASGLSQLGTTPANPFLQLALEGHEATAHHRNTRAHLHDSLDVSDWVTRCLRNCIDEFTT 121 Query: 122 KLQAGMAVLASVGSTAPFVGLFGTVWGIYHALVSIGTTGQASIDKVAGPVGEALIMTALG 181 +LQ+G+A+LASVGSTAPFVGLFGTVWGIYHAL+SIG++GQA+IDKVAGP+GEALIMTALG Sbjct: 122 RLQSGLAILASVGSTAPFVGLFGTVWGIYHALLSIGSSGQATIDKVAGPIGEALIMTALG 181 Query: 182 LAVAIPATFGYNALVRGNKTILAKLNKFGFDLHALFVTGAR--AAGE 226 LAVAIPA GYNALVRGNK+IL LN+F DLHA FVTGAR AAGE Sbjct: 182 LAVAIPAVLGYNALVRGNKSILGSLNRFAHDLHAYFVTGARVSAAGE 228