BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0206.p (138 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774116.1| biopolymer transport ExbD/TolR protein [Herb... 280 7e-74 ref|YP_004754517.1| biopolymer transport protein ExbD/TolR [Coll... 242 1e-62 ref|YP_001098672.1| putative biopolymer transport protein ExbD [... 220 6e-56 ref|YP_001352053.1| biopolymer transport protein ExbD [Janthinob... 207 3e-52 ref|ZP_08274159.1| Biopolymer transport protein ExbD/TolR [Oxalo... 192 1e-47 ref|ZP_02885811.1| Biopolymer transport protein ExbD/TolR [Burkh... 179 1e-43 ref|YP_440219.1| biopolymer ExbD/TolR family transporter [Burkho... 178 3e-43 ref|ZP_02371702.1| transport energizing protein, ExbD/TolR famil... 177 3e-43 ref|YP_106356.1| biopolymer ExbD/TolR family transporter [Burkho... 177 5e-43 ref|ZP_02385545.1| biopolymer transport protein, ExbD/TolR famil... 177 6e-43 >ref|YP_003774116.1| biopolymer transport ExbD/TolR protein [Herbaspirillum seropedicae SmR1] gb|ADJ62208.1| biopolymer transport ExbD/TolR protein [Herbaspirillum seropedicae SmR1] Length = 138 Score = 280 bits (715), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 137/138 (99%), Positives = 138/138 (100%) Query: 1 MAMGSLSDSDDDFNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVKP 60 MAMGSLSDSDDDFNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVKP Sbjct: 1 MAMGSLSDSDDDFNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVKP 60 Query: 61 ESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVMSA 120 ESINLSIDASGNVFWNEEKIDSGELS+RIAAAAQKQPQPELHLRAERTTQYEKVAQVMSA Sbjct: 61 ESINLSIDASGNVFWNEEKIDSGELSVRIAAAAQKQPQPELHLRAERTTQYEKVAQVMSA 120 Query: 121 AQSGGLAKIGFVTDPDKK 138 AQSGGLAKIGFVTDPDKK Sbjct: 121 AQSGGLAKIGFVTDPDKK 138 >ref|YP_004754517.1| biopolymer transport protein ExbD/TolR [Collimonas fungivorans Ter331] gb|AEK63694.1| Biopolymer transport protein ExbD/TolR [Collimonas fungivorans Ter331] Length = 139 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 115/138 (83%), Positives = 125/138 (90%) Query: 1 MAMGSLSDSDDDFNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVKP 60 M MGSLSDSDDDFNPEINTTPLVDVMLVLLIIFI+TIPVMNHAVKIDLP+A++QPDQ KP Sbjct: 2 MGMGSLSDSDDDFNPEINTTPLVDVMLVLLIIFIMTIPVMNHAVKIDLPRATNQPDQTKP 61 Query: 61 ESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVMSA 120 E+INLSIDA G +FWN+E +D EL+ RIA AAQKQPQPELHLRA RT QYEKVAQVM+A Sbjct: 62 ENINLSIDADGKLFWNDEVVDRNELNARIAVAAQKQPQPELHLRAARTVQYEKVAQVMAA 121 Query: 121 AQSGGLAKIGFVTDPDKK 138 AQSGGL KIGFVTDPD K Sbjct: 122 AQSGGLGKIGFVTDPDAK 139 >ref|YP_001098672.1| putative biopolymer transport protein ExbD [Herminiimonas arsenicoxydans] emb|CAL60543.1| Biopolymer transport protein exbD1 [Herminiimonas arsenicoxydans] Length = 137 Score = 220 bits (560), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 105/138 (76%), Positives = 125/138 (90%), Gaps = 1/138 (0%) Query: 1 MAMGSLSDSDDDFNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVKP 60 M+MGSLSD DDDFNPEINTTPLVDVMLVLLIIFI+TIPVMNHAVK+DLP+A++QP++VKP Sbjct: 1 MSMGSLSD-DDDFNPEINTTPLVDVMLVLLIIFIMTIPVMNHAVKLDLPRAANQPNEVKP 59 Query: 61 ESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVMSA 120 E+INLSIDA+G V+WN E +D +L+ R+A AA+ PQPELHLRAERTT YEKVAQVM+A Sbjct: 60 ETINLSIDAAGKVYWNNEILDESQLAARVADAAKVTPQPELHLRAERTTPYEKVAQVMAA 119 Query: 121 AQSGGLAKIGFVTDPDKK 138 AQSGGL+K+GFVT+ KK Sbjct: 120 AQSGGLSKMGFVTEAPKK 137 >ref|YP_001352053.1| biopolymer transport protein ExbD [Janthinobacterium sp. Marseille] gb|ABR89029.1| biopolymer transport protein ExbD [Janthinobacterium sp. Marseille] Length = 136 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 101/137 (73%), Positives = 119/137 (86%), Gaps = 1/137 (0%) Query: 1 MAMGSLSDSDDDFNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVKP 60 MAMGSLSD +DDFNPEINTTPLVDVMLVLLIIFI+TIPVMNHAVK+DLP A++QP+ VKP Sbjct: 1 MAMGSLSD-EDDFNPEINTTPLVDVMLVLLIIFIMTIPVMNHAVKLDLPHAANQPNDVKP 59 Query: 61 ESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVMSA 120 E+IN+SIDA+G V+WN E +D ++ RIA AA+ PQPELHLRA+R T YEKVAQVM+A Sbjct: 60 ETINVSIDAAGQVYWNNEVLDQSQMLSRIADAAKVTPQPELHLRADRLTPYEKVAQVMAA 119 Query: 121 AQSGGLAKIGFVTDPDK 137 AQSGGL K+GFVT+ K Sbjct: 120 AQSGGLTKMGFVTEAPK 136 >ref|ZP_08274159.1| Biopolymer transport protein ExbD/TolR [Oxalobacteraceae bacterium IMCC9480] gb|EGF32372.1| Biopolymer transport protein ExbD/TolR [Oxalobacteraceae bacterium IMCC9480] Length = 138 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/138 (80%), Positives = 123/138 (89%) Query: 1 MAMGSLSDSDDDFNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVKP 60 MAMGSLSD DDDFNPEINTTPLVDVMLVLL+IFI+TIPVMNH+VKIDLP+ASSQPD KP Sbjct: 1 MAMGSLSDQDDDFNPEINTTPLVDVMLVLLVIFIMTIPVMNHSVKIDLPRASSQPDVAKP 60 Query: 61 ESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVMSA 120 ESINL+IDA+G V WN E ID +L RIA AAQ QPQPELHLRAERTTQYEKVAQVM+A Sbjct: 61 ESINLAIDAAGQVHWNTEVIDERQLQARIATAAQAQPQPELHLRAERTTQYEKVAQVMAA 120 Query: 121 AQSGGLAKIGFVTDPDKK 138 AQ+GGL+KIGF+T+P K Sbjct: 121 AQAGGLSKIGFMTEPVSK 138 >ref|ZP_02885811.1| Biopolymer transport protein ExbD/TolR [Burkholderia graminis C4D1M] ref|YP_004227653.1| Biopolymer transport protein ExbD/TolR [Burkholderia sp. CCGE1001] gb|EDT08717.1| Biopolymer transport protein ExbD/TolR [Burkholderia graminis C4D1M] gb|ADX54593.1| Biopolymer transport protein ExbD/TolR [Burkholderia sp. CCGE1001] Length = 139 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 88/139 (63%), Positives = 105/139 (75%), Gaps = 1/139 (0%) Query: 1 MAMGSLSDSDDD-FNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVK 59 MAM + DDD EIN TPLVDVMLVLLI+F++TIPV+ HAVKIDLP ASSQ + K Sbjct: 1 MAMSPFAGDDDDGLMNEINMTPLVDVMLVLLIVFMVTIPVIRHAVKIDLPHASSQKEDTK 60 Query: 60 PESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVMS 119 P + +++DA GNV WN++K+D +LS +IA AAQ PQPELHL A+R YEKVAQVMS Sbjct: 61 PAQVTVAVDADGNVLWNDKKVDEAQLSAKIAEAAQANPQPELHLDADRKVPYEKVAQVMS 120 Query: 120 AAQSGGLAKIGFVTDPDKK 138 AAQ+GGL KIGFVT P K Sbjct: 121 AAQAGGLTKIGFVTQPKGK 139 >ref|YP_440219.1| biopolymer ExbD/TolR family transporter [Burkholderia thailandensis E264] gb|ABC34510.1| biopolymer transport protein, ExbD/TolR family [Burkholderia thailandensis E264] Length = 142 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 86/137 (62%), Positives = 110/137 (80%), Gaps = 2/137 (1%) Query: 1 MAMG-SLSDSDDD-FNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQV 58 MAM S D DDD EIN TPLVDVMLVLLIIF++TIP M+HAVKIDLP+ASSQP +V Sbjct: 1 MAMNTSFGDDDDDSLMNEINMTPLVDVMLVLLIIFLVTIPAMHHAVKIDLPRASSQPVEV 60 Query: 59 KPESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVM 118 KP++I+++I++ G V W++ +++ +L RIA AAQ PQPELHLRA+R YE+VA+VM Sbjct: 61 KPKTIDVAIESDGTVLWDDHPVNAADLQARIAQAAQTSPQPELHLRADRKVAYERVAEVM 120 Query: 119 SAAQSGGLAKIGFVTDP 135 SAAQ+GGL K+GFVT+P Sbjct: 121 SAAQAGGLTKLGFVTEP 137 >ref|ZP_02371702.1| transport energizing protein, ExbD/TolR family [Burkholderia thailandensis TXDOH] Length = 142 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 86/137 (62%), Positives = 110/137 (80%), Gaps = 2/137 (1%) Query: 1 MAMG-SLSDSDDD-FNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQV 58 MAM S D DDD EIN TPLVDVMLVLLIIF++TIP M+HAVKIDLP+ASSQP +V Sbjct: 1 MAMNTSFGDDDDDGLMNEINMTPLVDVMLVLLIIFLVTIPAMHHAVKIDLPRASSQPVEV 60 Query: 59 KPESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVM 118 KP++I+++I++ G V W++ +++ +L RIA AAQ PQPELHLRA+R YE+VA+VM Sbjct: 61 KPKTIDVAIESDGTVLWDDHPVNAADLQARIAQAAQTSPQPELHLRADRKVAYERVAEVM 120 Query: 119 SAAQSGGLAKIGFVTDP 135 SAAQ+GGL K+GFVT+P Sbjct: 121 SAAQAGGLTKLGFVTEP 137 >ref|YP_106356.1| biopolymer ExbD/TolR family transporter [Burkholderia mallei ATCC 23344] ref|YP_337082.1| biopolymer ExbD/TolR family transporter [Burkholderia pseudomallei 1710b] ref|YP_001024895.1| ExbD/TolR family transport energizing protein [Burkholderia mallei NCTC 10229] ref|YP_001061617.1| ExbD/TolR family transport energizing protein [Burkholderia pseudomallei 668] ref|YP_001079236.1| ExbD/TolR family transport energizing protein [Burkholderia mallei NCTC 10247] ref|ZP_01769707.1| transport energizing protein, ExbD/TolR family [Burkholderia pseudomallei 305] ref|ZP_02450288.1| transport energizing protein, ExbD/TolR family [Burkholderia pseudomallei 91] ref|ZP_04521341.1| biopolymer transport protein exbD1 [Burkholderia pseudomallei MSHR346] ref|ZP_04891888.1| transport energizing protein, ExbD/TolR family [Burkholderia pseudomallei 1655] ref|ZP_04909700.1| transport energizing protein, ExbD/TolR family [Burkholderia mallei FMH] gb|AAU45829.1| biopolymer transport protein, ExbD/TolR family [Burkholderia mallei ATCC 23344] gb|ABA52063.1| biopolymer transport protein, ExbD/TolR family [Burkholderia pseudomallei 1710b] gb|ABN86151.1| transport energizing protein, ExbD/TolR family [Burkholderia pseudomallei 668] gb|ABO03604.1| transport energizing protein, ExbD/TolR family [Burkholderia mallei NCTC 10247] gb|EBA45745.1| transport energizing protein, ExbD/TolR family [Burkholderia pseudomallei 305] gb|EDK52657.1| transport energizing protein, ExbD/TolR family [Burkholderia mallei FMH] gb|EDU06578.1| transport energizing protein, ExbD/TolR family [Burkholderia pseudomallei 1655] gb|EEP50255.1| biopolymer transport protein exbD1 [Burkholderia pseudomallei MSHR346] gb|ABM99326.2| transport energizing protein, ExbD/TolR family [Burkholderia mallei NCTC 10229] Length = 142 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 86/137 (62%), Positives = 109/137 (79%), Gaps = 2/137 (1%) Query: 1 MAMG-SLSDSDDD-FNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQV 58 MAM S D DDD EIN TPLVDVMLVLLIIF++TIP M+HAVKIDLP+ASSQP +V Sbjct: 1 MAMNTSFGDDDDDGLMNEINMTPLVDVMLVLLIIFLVTIPAMHHAVKIDLPRASSQPVEV 60 Query: 59 KPESINLSIDASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVM 118 KP++I+++I++ G V W++ + + +L RIA AAQ PQPELHLRA+R YE+VA+VM Sbjct: 61 KPKTIDVAIESDGTVLWDDHPVSAADLQARIAQAAQTNPQPELHLRADRKVAYERVAEVM 120 Query: 119 SAAQSGGLAKIGFVTDP 135 SAAQ+GGL K+GFVT+P Sbjct: 121 SAAQAGGLTKLGFVTEP 137 >ref|ZP_02385545.1| biopolymer transport protein, ExbD/TolR family [Burkholderia thailandensis Bt4] ref|ZP_05589107.1| biopolymer ExbD/TolR family transporter [Burkholderia thailandensis E264] Length = 140 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 81/128 (63%), Positives = 105/128 (82%) Query: 8 DSDDDFNPEINTTPLVDVMLVLLIIFIITIPVMNHAVKIDLPKASSQPDQVKPESINLSI 67 D DD EIN TPLVDVMLVLLIIF++TIP M+HAVKIDLP+ASSQP +VKP++I+++I Sbjct: 8 DDDDSLMNEINMTPLVDVMLVLLIIFLVTIPAMHHAVKIDLPRASSQPVEVKPKTIDVAI 67 Query: 68 DASGNVFWNEEKIDSGELSLRIAAAAQKQPQPELHLRAERTTQYEKVAQVMSAAQSGGLA 127 ++ G V W++ +++ +L RIA AAQ PQPELHLRA+R YE+VA+VMSAAQ+GGL Sbjct: 68 ESDGTVLWDDHPVNAADLQARIAQAAQTSPQPELHLRADRKVAYERVAEVMSAAQAGGLT 127 Query: 128 KIGFVTDP 135 K+GFVT+P Sbjct: 128 KLGFVTEP 135