BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0201.p (190 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774110.1| signal peptide protein [Herbaspirillum serop... 394 e-108 ref|YP_001098664.1| putative signal peptide [Herminiimonas arsen... 291 3e-77 ref|YP_001352046.1| hypothetical protein mma_0356 [Janthinobacte... 285 2e-75 ref|YP_004754294.1| putative signal peptide protein [Collimonas ... 274 4e-72 ref|ZP_07676039.1| YceI [Ralstonia sp. 5_7_47FAA] >gi|308919716|... 263 1e-68 ref|YP_001900516.1| YceI family protein [Ralstonia pickettii 12J... 263 1e-68 ref|YP_002982494.1| YceI family protein [Ralstonia pickettii 12D... 261 3e-68 ref|YP_003905720.1| YceI family protein [Burkholderia sp. CCGE10... 260 7e-68 ref|ZP_00943788.1| Hypothetical exported protein [Ralstonia sola... 259 1e-67 ref|YP_003751464.1| hypothetical protein RPSI07_0794 [Ralstonia ... 258 2e-67 >ref|YP_003774110.1| signal peptide protein [Herbaspirillum seropedicae SmR1] emb|CAM32615.1| Signal peptide protein [Herbaspirillum seropedicae] gb|ADJ62202.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 190 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/190 (100%), Positives = 190/190 (100%) Query: 1 MKLNHLLLALVAAGAAMSANAADTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLD 60 MKLNHLLLALVAAGAAMSANAADTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLD Sbjct: 1 MKLNHLLLALVAAGAAMSANAADTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLD 60 Query: 61 RAAKTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKGNIKFNGDKPATVEG 120 RAAKTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKGNIKFNGDKPATVEG Sbjct: 61 RAAKTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKGNIKFNGDKPATVEG 120 Query: 121 ELTLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETKL 180 ELTLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETKL Sbjct: 121 ELTLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETKL 180 Query: 181 AIQVEAVKTN 190 AIQVEAVKTN Sbjct: 181 AIQVEAVKTN 190 >ref|YP_001098664.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL60535.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 189 Score = 291 bits (746), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 138/191 (72%), Positives = 160/191 (83%), Gaps = 3/191 (1%) Query: 1 MKLNHLLLALVAAGAAMSANAADTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLD 60 MK L+ L+AA A ++ A TY+IDPSHTYPSFEADHMG+S+WRGKFDKTSG+V LD Sbjct: 1 MKSKIALICLLAASA--TSAFAQTYTIDPSHTYPSFEADHMGISVWRGKFDKTSGSVVLD 58 Query: 61 RAAKTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKGN-IKFNGDKPATVE 119 RAAKTG++D+ +DA SIDFGHAKMNEHAKS D+F+V K+PTA YK IKF+GDKP +V+ Sbjct: 59 RAAKTGSLDLVVDATSIDFGHAKMNEHAKSKDLFNVEKFPTATYKSKAIKFDGDKPVSVD 118 Query: 120 GELTLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETK 179 GELTL GVTKPVTL +NKF CIQHPMLKREVCG DASATFNR+DFG+ YG YGFS E K Sbjct: 119 GELTLLGVTKPVTLAINKFKCIQHPMLKREVCGADASATFNRSDFGLTYGINYGFSPEVK 178 Query: 180 LAIQVEAVKTN 190 LAIQVEAVK + Sbjct: 179 LAIQVEAVKAD 189 >ref|YP_001352046.1| hypothetical protein mma_0356 [Janthinobacterium sp. Marseille] gb|ABR88459.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 189 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 136/191 (71%), Positives = 159/191 (83%), Gaps = 3/191 (1%) Query: 1 MKLNHLLLALVAAGAAMSANAADTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLD 60 MK L+ L+AAGA S+ A TY+IDPSHTYPSFEADHMG+S+WRGKF+KTSGTV LD Sbjct: 1 MKSKLALICLLAAGA--SSAFAQTYTIDPSHTYPSFEADHMGISVWRGKFEKTSGTVVLD 58 Query: 61 RAAKTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKG-NIKFNGDKPATVE 119 RAAKTG+++I ID SIDFGHAKMNEHAKS D+F+V K+PTA YK +IKF+GDKP +V+ Sbjct: 59 RAAKTGSLEIVIDTNSIDFGHAKMNEHAKSKDIFNVEKFPTATYKSKSIKFDGDKPVSVD 118 Query: 120 GELTLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETK 179 GELTL GVTKPVTL +NKF CIQHPMLKREVCG DASA F R+DFG++Y YGFS + K Sbjct: 119 GELTLLGVTKPVTLNINKFKCIQHPMLKREVCGADASAEFKRSDFGLNYALNYGFSPDVK 178 Query: 180 LAIQVEAVKTN 190 LAIQVEAVK + Sbjct: 179 LAIQVEAVKAD 189 >ref|YP_004754294.1| putative signal peptide protein [Collimonas fungivorans Ter331] gb|AEK63471.1| putative signal peptide protein [Collimonas fungivorans Ter331] Length = 190 Score = 274 bits (701), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 138/191 (72%), Positives = 160/191 (83%), Gaps = 2/191 (1%) Query: 1 MKLNHLLLALVAAGAAMSANAADTYSIDPSHTYPSFEADHMGVSIWRGKFDKTSGTVTLD 60 MKL ++ +L+AA AA + AADTY+IDP+HTYPSF ADHMG+S WRGKF+KTSG+VTLD Sbjct: 1 MKLKLIIASLLAASAASAFAAADTYTIDPNHTYPSFTADHMGISFWRGKFEKTSGSVTLD 60 Query: 61 RAAKTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKG-NIKFNGDKPATVE 119 RAAKTG+VDI IDA+S+DFGHAKMNEHA D+FDV KYP YKG ++KF+GDKP V+ Sbjct: 61 RAAKTGSVDIRIDASSLDFGHAKMNEHASGPDIFDVKKYPDVTYKGTSVKFDGDKPVAVD 120 Query: 120 GELTLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETK 179 GELTLHGVTKPVTLT+N F CIQHPMLKREVCG DASA+FNR+DFGI YG FS E K Sbjct: 121 GELTLHGVTKPVTLTINSFKCIQHPMLKREVCGADASASFNRSDFGITYGLPM-FSPEVK 179 Query: 180 LAIQVEAVKTN 190 LAIQVE +KTN Sbjct: 180 LAIQVEGIKTN 190 >ref|ZP_07676039.1| YceI [Ralstonia sp. 5_7_47FAA] gb|EFP65377.1| YceI [Ralstonia sp. 5_7_47FAA] Length = 198 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 122/169 (72%), Positives = 139/169 (82%), Gaps = 2/169 (1%) Query: 24 TYSIDPSHTYPSFEADHMG-VSIWRGKFDKTSGTVTLDRAAKTGTVDITIDAASIDFGHA 82 TY +DPSHTYPSFEADHMG +S WRGKF+K+SGTVTLDRAAKTG++D+T+ SIDFG A Sbjct: 24 TYQLDPSHTYPSFEADHMGGLSKWRGKFEKSSGTVTLDRAAKTGSIDVTVQTDSIDFGLA 83 Query: 83 KMNEHAKSADMFDVAKYPTAQYKGNI-KFNGDKPATVEGELTLHGVTKPVTLTLNKFNCI 141 KMNEHAKSA++FDVAKYPTA +KGN KF GD P EG+LTLHGVTKP L ++ F CI Sbjct: 84 KMNEHAKSAEIFDVAKYPTATFKGNFTKFKGDVPTEAEGQLTLHGVTKPAKLQIDAFKCI 143 Query: 142 QHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETKLAIQVEAVKTN 190 QHPMLKREVCG DA TF R DFG+DYG YGF+METKL IQVE VK + Sbjct: 144 QHPMLKREVCGADAEMTFKRDDFGVDYGKAYGFNMETKLKIQVEGVKQD 192 >ref|YP_001900516.1| YceI family protein [Ralstonia pickettii 12J] gb|ACD28084.1| YceI family protein [Ralstonia pickettii 12J] Length = 198 Score = 263 bits (671), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 129/192 (67%), Positives = 149/192 (77%), Gaps = 2/192 (1%) Query: 1 MKLNHLLLALVAAGAAMSANAADTYSIDPSHTYPSFEADHMG-VSIWRGKFDKTSGTVTL 59 MKL L+ AL A A + A TY +DPSHTYPSFEADHMG +S WRGKF+K+SGTVTL Sbjct: 1 MKLRTLVAALSAIAATAAFAAPATYQLDPSHTYPSFEADHMGGLSKWRGKFEKSSGTVTL 60 Query: 60 DRAAKTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKGNI-KFNGDKPATV 118 DRAAKTG++D+T+ SIDFG AKMNEHAKSA++FDVAKYPTA +KGN KF GD P Sbjct: 61 DRAAKTGSIDVTVQTDSIDFGLAKMNEHAKSAEIFDVAKYPTATFKGNFTKFKGDVPTEA 120 Query: 119 EGELTLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMET 178 EG+LTLHGVTKP L ++ F C+QHPMLKREVCG DA F R DFG+DYG YGF+MET Sbjct: 121 EGQLTLHGVTKPAKLEIDAFKCMQHPMLKREVCGADAEMKFKRDDFGVDYGKAYGFNMET 180 Query: 179 KLAIQVEAVKTN 190 KL IQVE VK + Sbjct: 181 KLKIQVEGVKQD 192 >ref|YP_002982494.1| YceI family protein [Ralstonia pickettii 12D] gb|ACS63822.1| YceI family protein [Ralstonia pickettii 12D] Length = 198 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 121/169 (71%), Positives = 138/169 (81%), Gaps = 2/169 (1%) Query: 24 TYSIDPSHTYPSFEADHMG-VSIWRGKFDKTSGTVTLDRAAKTGTVDITIDAASIDFGHA 82 TY +DPSHTYPSFEADHMG +S WRGKF+K+SGTVTLDRAAKTG++D+T+ SIDFG A Sbjct: 24 TYQLDPSHTYPSFEADHMGGLSKWRGKFEKSSGTVTLDRAAKTGSIDVTVQTDSIDFGLA 83 Query: 83 KMNEHAKSADMFDVAKYPTAQYKGNI-KFNGDKPATVEGELTLHGVTKPVTLTLNKFNCI 141 KMNEHAKSA++FDV KYPTA +KGN KF GD P EG+LTLHGVTKP L ++ F CI Sbjct: 84 KMNEHAKSAEIFDVTKYPTATFKGNFTKFKGDVPTEAEGQLTLHGVTKPAKLQIDAFKCI 143 Query: 142 QHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETKLAIQVEAVKTN 190 QHPMLKREVCG DA TF R DFG+DYG YGF+METKL IQVE VK + Sbjct: 144 QHPMLKREVCGADAEMTFKRDDFGVDYGKAYGFNMETKLKIQVEGVKQD 192 >ref|YP_003905720.1| YceI family protein [Burkholderia sp. CCGE1003] gb|ADN56429.1| YceI family protein [Burkholderia sp. CCGE1003] Length = 188 Score = 260 bits (665), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 123/186 (66%), Positives = 153/186 (82%), Gaps = 7/186 (3%) Query: 10 LVAAGA-----AMSANAADTYSIDPSHTYPSFEADHMG-VSIWRGKFDKTSGTVTLDRAA 63 L+AAGA ++ A AADTY +DP+HTYPSFEADH G +S+WRGKF K+SGTVTLDRAA Sbjct: 2 LIAAGALASCVSLGAFAADTYQLDPTHTYPSFEADHFGGLSVWRGKFTKSSGTVTLDRAA 61 Query: 64 KTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKG-NIKFNGDKPATVEGEL 122 KTGTV++T+DAAS+ G+ K+++H K A+ FDVAK+PTA YKG +I+F+GDKPA V G L Sbjct: 62 KTGTVEVTVDAASVSTGNTKLDDHLKEAEFFDVAKFPTATYKGTSIRFDGDKPAEVVGSL 121 Query: 123 TLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETKLAI 182 TLHGVTKP+ L + F C+ HPMLKREVCG +ASA FNRAD+G+D+G+KYGFSMETKL I Sbjct: 122 TLHGVTKPLNLKIESFKCMPHPMLKREVCGVEASAQFNRADYGMDFGSKYGFSMETKLHI 181 Query: 183 QVEAVK 188 Q E +K Sbjct: 182 QAEGIK 187 >ref|ZP_00943788.1| Hypothetical exported protein [Ralstonia solanacearum UW551] ref|YP_002260677.1| hypothetical protein RSIPO_02475 [Ralstonia solanacearum IPO1609] gb|EAP73639.1| Hypothetical exported protein [Ralstonia solanacearum UW551] emb|CAQ62617.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 198 Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 119/169 (70%), Positives = 137/169 (81%), Gaps = 2/169 (1%) Query: 24 TYSIDPSHTYPSFEADHMG-VSIWRGKFDKTSGTVTLDRAAKTGTVDITIDAASIDFGHA 82 TY +DPSHTYPSFEADHMG +S WRGKF+K+SGTVTLDRAAK GT+D+T+ SIDFG A Sbjct: 24 TYQLDPSHTYPSFEADHMGGLSKWRGKFEKSSGTVTLDRAAKAGTIDVTVQTDSIDFGFA 83 Query: 83 KMNEHAKSADMFDVAKYPTAQYKGNI-KFNGDKPATVEGELTLHGVTKPVTLTLNKFNCI 141 KMNEHAK AD+FDVAKYPTA +KG KF GD P EG+LTLHGVTKPV L ++ F C+ Sbjct: 84 KMNEHAKGADLFDVAKYPTATFKGTFTKFKGDAPTEAEGQLTLHGVTKPVKLEIDAFKCM 143 Query: 142 QHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMETKLAIQVEAVKTN 190 QHPMLKREVCG DA FNR +FG+DYG +YGF METKL IQVE +K + Sbjct: 144 QHPMLKREVCGADAEMKFNRDEFGLDYGKQYGFKMETKLKIQVEGLKQD 192 >ref|YP_003751464.1| hypothetical protein RPSI07_0794 [Ralstonia solanacearum PSI07] emb|CBJ50155.1| Conserved protein of unknown function, YceI like family [Ralstonia solanacearum PSI07] emb|CCA81604.1| conserved hypothetical protein, YceI like family [blood disease bacterium R229] Length = 198 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 124/192 (64%), Positives = 144/192 (75%), Gaps = 2/192 (1%) Query: 1 MKLNHLLLALVAAGAAMSANAADTYSIDPSHTYPSFEADHMG-VSIWRGKFDKTSGTVTL 59 MKL L+ AL A + A TY +DPSHTYPSFEADHMG +S WRGKF+K+SG VTL Sbjct: 1 MKLRTLVAALSTVAATAAFAAPVTYQLDPSHTYPSFEADHMGGLSKWRGKFEKSSGVVTL 60 Query: 60 DRAAKTGTVDITIDAASIDFGHAKMNEHAKSADMFDVAKYPTAQYKGNI-KFNGDKPATV 118 DR AK GT+D+T+ SIDFG AKMNEHAKSAD+FDVAKYPTA +KG KF GD P Sbjct: 61 DREAKAGTIDVTVQTDSIDFGFAKMNEHAKSADLFDVAKYPTATFKGTFTKFKGDTPTEA 120 Query: 119 EGELTLHGVTKPVTLTLNKFNCIQHPMLKREVCGGDASATFNRADFGIDYGAKYGFSMET 178 EG+LTLHGVTKPV + ++ F C+ HPMLKREVCG DA FNR FG+DYG +YGF MET Sbjct: 121 EGQLTLHGVTKPVKMEIDAFKCMPHPMLKREVCGADAEMKFNRDAFGLDYGKQYGFKMET 180 Query: 179 KLAIQVEAVKTN 190 KL IQVE +K + Sbjct: 181 KLKIQVEGLKQD 192