BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0194.p (347 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774103.1| translation factor SUA5 [Herbaspirillum sero... 677 0.0 ref|YP_001354532.1| hypothetical protein mma_2842 [Janthinobacte... 433 e-119 ref|YP_001100848.1| putative Sua5/YciO/YrdC/YwlC family protein ... 426 e-117 ref|YP_004754429.1| Sua5 YciO YrdC YwlC family protein [Collimon... 410 e-112 ref|ZP_08274951.1| Sua5 YciO YrdC YwlC family protein [Oxalobact... 410 e-112 ref|ZP_04579195.1| translation factor SUA5 [Oxalobacter formigen... 407 e-111 ref|ZP_04576127.1| translation factor SUA5 [Oxalobacter formigen... 392 e-107 ref|YP_004417206.1| hypothetical protein PT7_2042 [Pusillimonas ... 360 1e-97 ref|YP_582662.1| putative translation factor (SUA5) [Cupriavidus... 360 2e-97 ref|ZP_04963768.1| Sua5/YciO/YrdC/YwlC family protein [Burkholde... 360 2e-97 >ref|YP_003774103.1| translation factor SUA5 [Herbaspirillum seropedicae SmR1] gb|ADJ62195.1| translation factor (SUA5) protein [Herbaspirillum seropedicae SmR1] Length = 347 Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/347 (98%), Positives = 343/347 (98%) Query: 1 MNDKSASSPAIDAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPA 60 MNDKSASS AIDAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPA Sbjct: 1 MNDKSASSSAIDAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPA 60 Query: 61 NHPVIVHVSPESDIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGV 120 NHPVIVHVSPE+DIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGV Sbjct: 61 NHPVIVHVSPEADIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGV 120 Query: 121 RCPAHPVAQALLREFRGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGG 180 RCPAHPVAQALLREFRGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDA SLVDYVLDGG Sbjct: 121 RCPAHPVAQALLREFRGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDAGSLVDYVLDGG 180 Query: 181 QSEVGIESTIVDLSRIDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHY 240 QSEVGIESTIVDLSRIDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHY Sbjct: 181 QSEVGIESTIVDLSRIDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHY 240 Query: 241 APHTPVVQVAPDELDAVLEKLAALGKKVALIARLQRSGLVSVTRAMPDTADAYAHDLYAA 300 APHTPVVQVAP+EL VLEKLAALGKKVALIARLQRSGLVSVTRAMPDTADAYAHDLYAA Sbjct: 241 APHTPVVQVAPEELATVLEKLAALGKKVALIARLQRSGLVSVTRAMPDTADAYAHDLYAA 300 Query: 301 LRDMDHTGADLIVVEALPLSGQWQGVNDRLRRAAFDSQGLLARLFQA 347 LRDMDHTGADLIVVEALPLSGQWQGVNDRLRRAAFDSQGLLARLFQA Sbjct: 301 LRDMDHTGADLIVVEALPLSGQWQGVNDRLRRAAFDSQGLLARLFQA 347 >ref|YP_001354532.1| hypothetical protein mma_2842 [Janthinobacterium sp. Marseille] gb|ABR89845.1| Uncharacterized conserved protein, putative translation factor [Janthinobacterium sp. Marseille] Length = 340 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 225/338 (66%), Positives = 268/338 (79%), Gaps = 4/338 (1%) Query: 10 AIDAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPANHPVIVHVS 69 ++D A+ AAR LE+G LVAFPTETVYGLG DAENPAA+A IYAAKGRP+NHPVIVH++ Sbjct: 5 SLDWPAIRDAARRLEQGELVAFPTETVYGLGADAENPAAVANIYAAKGRPSNHPVIVHLA 64 Query: 70 PESDIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGVRCPAHPVAQ 129 PE+D+ YWA SV +A++LIA FWPGPLTLILKRA HIPDAV+GGQDS+G+RCP+HPVAQ Sbjct: 65 PEADLNYWAQSVSPDAQKLIAVFWPGPLTLILKRAVHIPDAVSGGQDSIGLRCPSHPVAQ 124 Query: 130 ALLREFRGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGGQSEVGIEST 189 ALLR F+ GKGG+A PSANKFGHVSPTTA+HV EFG DA SL+ +LDGGQSEVGIEST Sbjct: 125 ALLRAFKDGKGGVAAPSANKFGHVSPTTAQHVHNEFGGDAGSLLTCILDGGQSEVGIEST 184 Query: 190 IVDLSRIDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHYAPHTPVVQV 249 IVD+SR H VLLRPG ISAE+I AV+G A+PD +APRASGTL++HYAP TPVV V Sbjct: 185 IVDMSR--GHA-VLLRPGHISAEQIAAVIGYLPASPDQAAPRASGTLESHYAPLTPVVLV 241 Query: 250 APDELDAVLEKLAALGKKVALIAR-LQRSGLVSVTRAMPDTADAYAHDLYAALRDMDHTG 308 + L AVL+KL G++ AL+ + LV+ + ++PDT AYAHDLYAALR MD Sbjct: 242 DGEHLLAVLQKLNLRGRRAALMQYAVDAMPLVAASISLPDTPIAYAHDLYAALRAMDDVH 301 Query: 309 ADLIVVEALPLSGQWQGVNDRLRRAAFDSQGLLARLFQ 346 AD+IVV+ P W GVNDRLRRAA DS G+L RL + Sbjct: 302 ADVIVVQTPPTDVAWSGVNDRLRRAAHDSAGILQRLLE 339 >ref|YP_001100848.1| putative Sua5/YciO/YrdC/YwlC family protein [Herminiimonas arsenicoxydans] emb|CAL62727.1| Conserved hypothetical protein, putative translation factor [Herminiimonas arsenicoxydans] Length = 339 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 224/341 (65%), Positives = 260/341 (76%), Gaps = 10/341 (2%) Query: 10 AIDAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPANHPVIVHVS 69 ++D A+ AAR LERG LVAFPTETVYGLG DAENP A+A IY AKGRP+NHPVIVH++ Sbjct: 4 SLDLTAIADAARRLERGELVAFPTETVYGLGADAENPLAVAKIYQAKGRPSNHPVIVHLA 63 Query: 70 PESDIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGVRCPAHPVAQ 129 PE+DI YWA V EAR+LIA+FWPGPLTLILKRA HIPD VAGGQDS+G+RCP+HPVAQ Sbjct: 64 PEADIAYWAKDVSPEARQLIAAFWPGPLTLILKRANHIPDTVAGGQDSIGLRCPSHPVAQ 123 Query: 130 ALLREFRGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGGQSEVGIEST 189 ALLR F+ GKGGIA PSANKFGHVSPTTA+HVR+EF D + L+ VLDGGQSEVGIEST Sbjct: 124 ALLRNFKQGKGGIAAPSANKFGHVSPTTAQHVRDEFVDDTNGLLTCVLDGGQSEVGIEST 183 Query: 190 IVDLSRIDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHYAPHTPVVQV 249 IVD+SR VLLRPG ISA +I AVLGV PDA+APRASGTL+AHYAPHTPVV + Sbjct: 184 IVDMSRGRA---VLLRPGHISAAQIGAVLGVAPLLPDAAAPRASGTLEAHYAPHTPVVLL 240 Query: 250 APDELDAVLEKLAALGKKVALIARLQRSGLVSVTRA----MPDTADAYAHDLYAALRDMD 305 +++ L++L A GK+VAL + S +V A +P YAHDLYAALR MD Sbjct: 241 EREQMHEALQQLHAHGKRVAL---MHHSFTATVPAAASIFLPAQPALYAHDLYAALRAMD 297 Query: 306 HTGADLIVVEALPLSGQWQGVNDRLRRAAFDSQGLLARLFQ 346 AD+I+VE+ P W GVNDRLRRAA DS G+L L Q Sbjct: 298 DAHADVIMVESPPGDEAWNGVNDRLRRAAHDSSGILLTLLQ 338 >ref|YP_004754429.1| Sua5 YciO YrdC YwlC family protein [Collimonas fungivorans Ter331] gb|AEK63606.1| Sua5 YciO YrdC YwlC family protein [Collimonas fungivorans Ter331] Length = 344 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 231/338 (68%), Positives = 271/338 (80%), Gaps = 3/338 (0%) Query: 8 SPAIDAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPANHPVIVH 67 SP ID A+ AAR LE G LVAFPTETVYGLG DAEN AA+A+IYAAKGRP+NHPVIVH Sbjct: 3 SPVIDLQAIRLAARKLEAGALVAFPTETVYGLGADAENAAAVASIYAAKGRPSNHPVIVH 62 Query: 68 VSPESDIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGVRCPAHPV 127 V+PE+DI YW SVP +A+ LIA+FWPGPLTLIL RAAHIPD V+GGQ SVG+RCP+HPV Sbjct: 63 VAPEADIAYWVESVPPQAQALIAAFWPGPLTLILPRAAHIPDQVSGGQSSVGLRCPSHPV 122 Query: 128 AQALLREFRGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGGQSEVGIE 187 AQALLREF+GGKGGIAGPSANKFGHVSPTTA+HVR+EF ++ DS + +LDGGQSEVGIE Sbjct: 123 AQALLREFKGGKGGIAGPSANKFGHVSPTTAQHVRDEFDTEGDSPIACILDGGQSEVGIE 182 Query: 188 STIVDLSRIDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHYAPHTPVV 247 STI+DLSRI HGPVLLRPG ISA +I AVLGV + DA+APRASGTL++HYAP TPV+ Sbjct: 183 STIIDLSRIAAHGPVLLRPGHISAAQIGAVLGVAVQAADAAAPRASGTLESHYAPRTPVL 242 Query: 248 QVAPDELDAVLEKLAALGKKVALIA-RLQRSGLVSVTRAMPDTAD--AYAHDLYAALRDM 304 V +L +L+++ G+ +ALI+ +G+ + P TA+ AYAHDLYAALR+M Sbjct: 243 LVPSAQLAGILQQMHQAGQNLALISYSAPAAGMPPLAAQFPMTAEAQAYAHDLYAALRNM 302 Query: 305 DHTGADLIVVEALPLSGQWQGVNDRLRRAAFDSQGLLA 342 DH ADLIVVEA P WQGVNDRLRRAA DS +LA Sbjct: 303 DHAAADLIVVEAPPSGLAWQGVNDRLRRAAHDSSAVLA 340 >ref|ZP_08274951.1| Sua5 YciO YrdC YwlC family protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31576.1| Sua5 YciO YrdC YwlC family protein [Oxalobacteraceae bacterium IMCC9480] Length = 333 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 218/332 (65%), Positives = 265/332 (79%), Gaps = 9/332 (2%) Query: 16 VMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPANHPVIVHVSPESDIG 75 ++ AA LE+G LVAFPTETVYGLG DAENPAAIA IYAAKGRP+NHPVIVH++PE+D G Sbjct: 9 ILRAAGLLEQGRLVAFPTETVYGLGADAENPAAIARIYAAKGRPSNHPVIVHLAPEADPG 68 Query: 76 YWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGVRCPAHPVAQALLREF 135 YW +++P EA+ LI +FWPGPLTLIL RAAHIP AVAGGQ+S+GVRCP+HPVAQALLR F Sbjct: 69 YWVSAIPNEAQALIDAFWPGPLTLILPRAAHIPAAVAGGQNSIGVRCPSHPVAQALLRAF 128 Query: 136 RGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGGQSEVGIESTIVDLSR 195 +GGKGGIA PSANKFGHVSPT A+HVR+EF D VD +LDGGQSEVGIES+I+DLSR Sbjct: 129 KGGKGGIAAPSANKFGHVSPTIAQHVRDEF---TDGSVDLILDGGQSEVGIESSIIDLSR 185 Query: 196 IDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHYAPHTPVVQVAPDELD 255 +D+HGPVLLRPG+I+A ++ VLGV A PDA+APRASGTL+AHYAP TPV +A +L Sbjct: 186 LDSHGPVLLRPGRITALQLAQVLGVAPAAPDAAAPRASGTLEAHYAPRTPVAMIASADLP 245 Query: 256 AVLEKLAALGKKVALI--ARLQRSGLVSVTRAMPDTADAYAHDLYAALRDMDHTGADLIV 313 +L++LAA G++VAL+ + Q +G + +P + YAH LYA LR +D ADLI+ Sbjct: 246 QILQQLAAAGRRVALLHWSDSQHAGALQ----LPSSPAGYAHGLYAGLRLLDMADADLIL 301 Query: 314 VEALPLSGQWQGVNDRLRRAAFDSQGLLARLF 345 +EA P S WQ +NDRLRRAA DS G+L RL Sbjct: 302 IEAPPGSADWQAINDRLRRAAHDSAGILERLL 333 >ref|ZP_04579195.1| translation factor SUA5 [Oxalobacter formigenes OXCC13] gb|EEO30168.1| translation factor SUA5 [Oxalobacter formigenes OXCC13] Length = 342 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/335 (62%), Positives = 260/335 (77%), Gaps = 8/335 (2%) Query: 16 VMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPANHPVIVHVSPESDIG 75 V AAR LE G LVAFPTETVYGLG DAEN A AAI+A K RPANHP+IVHV+P++DIG Sbjct: 9 VRAAARMLESGQLVAFPTETVYGLGADAENAVATAAIFALKNRPANHPLIVHVAPDADIG 68 Query: 76 YWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGVRCPAHPVAQALLREF 135 YW++ +P EA++LI +FWPGPLTLILK+AAHIP AVAGGQDS+G+RCP+HPVAQALLR F Sbjct: 69 YWSSYIPDEAKKLIDAFWPGPLTLILKKAAHIPAAVAGGQDSIGLRCPSHPVAQALLRAF 128 Query: 136 RGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGGQSEVGIESTIVDLSR 195 +GGKGGIAGPSAN+FGHVSPT AEHVREEFG D + +L+GGQSEVGIESTI+DLSR Sbjct: 129 KGGKGGIAGPSANRFGHVSPTRAEHVREEFGDDPR--LAAILEGGQSEVGIESTILDLSR 186 Query: 196 IDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHYAPHTPVVQVAPDELD 255 I+T GPVLLRPG+I + +I V+G PDA+APRASGTL +HYAP TPVV V +L Sbjct: 187 IETAGPVLLRPGKIHSLQIAEVIGRMPEMPDAAAPRASGTLASHYAPLTPVVIVPEKDLT 246 Query: 256 AVLEKLAALGKKVAL-----IARLQRSGLVSVTRAMPDTADAYAHDLYAALRDMDHTGAD 310 +VL++L +VAL ++ ++ LV T + + D Y+H LYA+LR++D AD Sbjct: 247 SVLKQLEKKNIRVALLHYSSLSSDRKQPLVKQT-GLFCSPDVYSHQLYASLRELDRHRAD 305 Query: 311 LIVVEALPLSGQWQGVNDRLRRAAFDSQGLLARLF 345 +I+VEA P + W+GVNDRLRRAA++ QG+L + Sbjct: 306 VILVEATPDTEAWKGVNDRLRRAAYNGQGILEKWL 340 >ref|ZP_04576127.1| translation factor SUA5 [Oxalobacter formigenes HOxBLS] gb|EEO27089.1| translation factor SUA5 [Oxalobacter formigenes HOxBLS] Length = 344 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 202/341 (59%), Positives = 256/341 (75%), Gaps = 14/341 (4%) Query: 12 DAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPANHPVIVHVSPE 71 +A ++ AAR LE G LVAFPTETVYGLGGDAENPAA+AAIYA K RPA+HP+IVHV+ Sbjct: 3 NADDILAAARILESGRLVAFPTETVYGLGGDAENPAAVAAIYALKNRPASHPLIVHVASG 62 Query: 72 SDIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGVRCPAHPVAQAL 131 SDI YW+ +P EAR+L+A+FWPGPLTLILKRA+H+ VAGGQDSVG+RCP+HPVAQAL Sbjct: 63 SDIAYWSDRIPDEARKLMAAFWPGPLTLILKRASHVLPDVAGGQDSVGLRCPSHPVAQAL 122 Query: 132 LREFRGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGGQSEVGIESTIV 191 L F+ G+GG+A PSAN+FGHVSPT A+HVR+EFG D + +LDGGQSEVGIESTI+ Sbjct: 123 LGLFKQGRGGVAAPSANRFGHVSPTMAQHVRDEFGDDPR--LGAILDGGQSEVGIESTIL 180 Query: 192 DLSRIDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHYAPHTPVVQVAP 251 DLSRI+T GPVLLRPG+I A +I V+G+ PD APRASGTL +HYAP TPV + Sbjct: 181 DLSRIETAGPVLLRPGKIGASQIAEVIGMMPKVPDNGAPRASGTLASHYAPRTPVAVIPS 240 Query: 252 DELDAVLEKLAALGKKVALI--------ARLQRSGLVSVTRAMPDTADAYAHDLYAALRD 303 D+L +L +L G +VAL+ ++ +G V + A D Y+H LYA+LR Sbjct: 241 DKLLQLLVRLEENGHRVALLHYSSLPASRKMSLAGEVGLYCA----PDVYSHQLYASLRK 296 Query: 304 MDHTGADLIVVEALPLSGQWQGVNDRLRRAAFDSQGLLARL 344 +D +GAD+I+VEA P + W+GVNDRL+RAA++ G + +L Sbjct: 297 LDRSGADVILVEATPETETWKGVNDRLKRAAYNGLGTIEQL 337 >ref|YP_004417206.1| hypothetical protein PT7_2042 [Pusillimonas sp. T7-7] gb|AEC20582.1| hypothetical protein PT7_2042 [Pusillimonas sp. T7-7] Length = 346 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 201/345 (58%), Positives = 243/345 (70%), Gaps = 14/345 (4%) Query: 1 MNDKSASSPAIDAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPA 60 MN ++ P ++ + AAR L +GGLVAFPTETVYGLG DAENP A+A+IYAAKGRPA Sbjct: 1 MNSPASPVPDMEQQ-LSAAARRLAQGGLVAFPTETVYGLGADAENPQALASIYAAKGRPA 59 Query: 61 NHPVIVHVSPESDIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGV 120 NHPVIVHV+PE+D+GYWAASVP EAR LI +FWPGPLTLIL RA HIP AV+GGQDS+G+ Sbjct: 60 NHPVIVHVAPEADLGYWAASVPAEARALIQAFWPGPLTLILPRAPHIPAAVSGGQDSIGL 119 Query: 121 RCPAHPVAQALLREFR----GGKGGIAGPSANKFGHVSPTTAEHVREEFGS-DADSLVDY 175 RCP+HPVAQALLREF G+GG+A PSANKFG VSPT A HVR EF D L+ Sbjct: 120 RCPSHPVAQALLREFARQKPNGQGGVAAPSANKFGQVSPTHAAHVRTEFPELGTDQLL-- 177 Query: 176 VLDGGQSEVGIESTIVDLSRIDTH-GPVLLRPGQISAERIEAVLGVPLATPDASAPRASG 234 VL+GG SEVGIESTIVD+SR+ GPVLLRPG ISA ++ VLG P A PD AP+ SG Sbjct: 178 VLEGGPSEVGIESTIVDVSRLGLGVGPVLLRPGHISAAQLAEVLGAPPARPDQDAPQVSG 237 Query: 235 TLDAHYAPHTPVVQVAPDE-LDAVLEKLAA--LGKKVALIARLQRSGLVSVTRAMPDTAD 291 +L AHYAPHTP+ + D+ LDA + L G+ ++ + +S + AD Sbjct: 238 SLKAHYAPHTPLQVLPLDQLLDAARQSLPNNLSGRTAVVVFNPELLNTMSDVDTLKCNAD 297 Query: 292 --AYAHDLYAALRDMDHTGADLIVVEALPLSGQWQGVNDRLRRAA 334 YA +LYA LR +D G D I++E P + WQ VNDR+ RAA Sbjct: 298 PAVYARELYALLRRLDEQGYDRILMEQPPRTATWQAVNDRIGRAA 342 >ref|YP_582662.1| putative translation factor (SUA5) [Cupriavidus metallidurans CH34] gb|ABF07393.1| putative translation factor (SUA5) [Cupriavidus metallidurans CH34] Length = 330 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 197/326 (60%), Positives = 230/326 (70%), Gaps = 13/326 (3%) Query: 13 AAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPANHPVIVHVSPES 72 AA + A R LE G LVAFPTETVYGLG DAENP A+A I+AAKGRP+NHPVIVHV + Sbjct: 8 AAELDEAVRLLEAGELVAFPTETVYGLGADAENPEAVARIFAAKGRPSNHPVIVHVVDGA 67 Query: 73 DIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGVRCPAHPVAQALL 132 D+GYW+ VP A++LI +FWPGPLT+ILKRAAHIP AVAGGQDS+G+RCP+HPVAQALL Sbjct: 68 DVGYWSDDVPEAAQKLIDAFWPGPLTIILKRAAHIPAAVAGGQDSIGLRCPSHPVAQALL 127 Query: 133 REFRGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGGQSEVGIESTIVD 192 FR G+GGIA PSANKFG VSPTTAEHVR+EFG YVL+G +VGIES+IVD Sbjct: 128 SRFRRGRGGIAAPSANKFGQVSPTTAEHVRDEFGGSV-----YVLEGDGVDVGIESSIVD 182 Query: 193 LSRIDTHGPVLLRPGQISAERIEAVLGVPLATPDASAPRASGTLDAHYAPHTPVVQVAPD 252 LSR+DT GPVLLRPG I+A + VLG PDA+APRASGTL AHYAP T + D Sbjct: 183 LSRLDTAGPVLLRPGAITAAMMADVLGTMPLPPDAAAPRASGTLKAHYAPRTTLTLAQAD 242 Query: 253 ELDAVLEKLAALGKKVALIARLQRSGLVSVTRAM----PDTADAYAHDLYAALRDMDHTG 308 L L L+A G+ +A + R+ S R P T DAYA +LY LR +D G Sbjct: 243 ALPQYLHGLSADGR----LAWVGRAPATSDPRCTFVEAPATPDAYAQELYRLLRRLDKEG 298 Query: 309 ADLIVVEALPLSGQWQGVNDRLRRAA 334 +V E LP S +W GV DRL RAA Sbjct: 299 FQRLVFEPLPESLEWDGVRDRLGRAA 324 >ref|ZP_04963768.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 406e] gb|EDO83049.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia pseudomallei 406e] Length = 341 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 204/347 (58%), Positives = 245/347 (70%), Gaps = 21/347 (6%) Query: 5 SASSPAIDAAAVMHAARTLERGGLVAFPTETVYGLGGDAENPAAIAAIYAAKGRPANHPV 64 S P A A+ AA L+ G LVAFPTETVYGLG DA+NPAA+A IYAAKGRPANHPV Sbjct: 2 SNDRPFPSAEAIEDAAARLDAGELVAFPTETVYGLGADAQNPAAVARIYAAKGRPANHPV 61 Query: 65 IVHVSPESDIGYWAASVPVEARRLIASFWPGPLTLILKRAAHIPDAVAGGQDSVGVRCPA 124 IVH++P SD GYW ++P +A++LI +FWPGPLTLILKRA HIPDAV+GGQDSVG+RCP+ Sbjct: 62 IVHLAPGSDPGYWVEALPADAKKLIDAFWPGPLTLILKRATHIPDAVSGGQDSVGLRCPS 121 Query: 125 HPVAQALLREF---RGGKGGIAGPSANKFGHVSPTTAEHVREEFGSDADSLVDYVLDGGQ 181 HPVAQALLR F RGG GG+A PSAN+FGHVSPTTA+HVR+EFG D++ +VLDGG Sbjct: 122 HPVAQALLRAFDARRGGHGGVAAPSANRFGHVSPTTAQHVRDEFG---DAV--HVLDGGP 176 Query: 182 SEVGIESTIVDLSRIDTHGPVLLRPGQISAERIEAVLGVPLATP---DASAPRASGTLDA 238 S+VGIESTI+DLSR P LLRPG +S +I VLGV P DA+APRASGTL A Sbjct: 177 SDVGIESTILDLSR---GFPALLRPGHVSPRQIADVLGVAPRLPDGSDATAPRASGTLKA 233 Query: 239 HYAPHTPVVQVAPDELDAVLEKLAALGKKVALIARLQRSGLVSVTR-----AMPDTADAY 293 HYAP TP+ A + L+ +L G+ VAL+AR R+G + A P+ AY Sbjct: 234 HYAPRTPLALAAFERLEPLLAAARDTGEPVALVARASRAGAWAHAAGVHFVAAPEDPAAY 293 Query: 294 AHDLYAALRDMDHTGADLIVVEALPLSGQWQGVNDRLRR--AAFDSQ 338 A +LY LR +D I+VE LP + +W VNDRL R AAFD Q Sbjct: 294 ARELYGLLRALDRAQVARILVEKLPDTAEWTAVNDRLGRAAAAFDVQ 340