BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0174.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774083.1| RecA-regulatory protein [Herbaspirillum sero... 305 1e-81 ref|YP_004754450.1| regulatory protein recX [Collimonas fungivor... 198 3e-49 ref|YP_001354550.1| RecX regulatory protein [Janthinobacterium s... 184 4e-45 ref|YP_001100870.1| RecX family regulatory protein [Herminiimona... 178 3e-43 ref|YP_002258800.1| regulatory protein recx [Ralstonia solanacea... 157 4e-37 emb|CAQ56863.1| regulatory protein recx [Ralstonia solanacearum ... 157 5e-37 ref|YP_003753428.1| recombination regulator RecX (Modulates recA... 155 2e-36 gb|AEG70120.1| recombinase X [Ralstonia solanacearum Po82] 155 2e-36 ref|YP_003746689.1| recombination regulator recx (modulates reca... 155 2e-36 emb|CCA88932.1| recombination regulator RecX (Modulates recA act... 154 3e-36 >ref|YP_003774083.1| RecA-regulatory protein [Herbaspirillum seropedicae SmR1] sp|O86082.2|RECX_HERSE RecName: Full=Regulatory protein recX gb|AAC34592.2| putative regulatory protein RecX [Herbaspirillum seropedicae] gb|ADJ62175.1| RecA-regulatory protein [Herbaspirillum seropedicae SmR1] Length = 154 Score = 305 bits (782), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 153/154 (99%), Positives = 154/154 (100%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE Sbjct: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE Sbjct: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTAWLDEDEPS 154 TRAKQMRFLQQRGFSHRSIREAFQTAWLDED+PS Sbjct: 121 TRAKQMRFLQQRGFSHRSIREAFQTAWLDEDDPS 154 >ref|YP_004754450.1| regulatory protein recX [Collimonas fungivorans Ter331] gb|AEK63627.1| Regulatory protein recX [Collimonas fungivorans Ter331] Length = 156 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 101/144 (70%), Positives = 117/144 (81%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 M +P ISLKARAL+YLS+REHSRLELARKLA YAQEGDDIEALL LE ++ LSQ RFSE Sbjct: 1 MAKPQISLKARALRYLSAREHSRLELARKLARYAQEGDDIEALLDTLEAAKLLSQARFSE 60 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 SL+HRRA RYGN RILSEL HGI+ +A+ D+KA LA+GE RA +V R+KF PA AE Sbjct: 61 SLIHRRAHRYGNSRILSELQSHGIDADALVDIKAGLASGEIARAREVWRKKFKQVPASAE 120 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQ 144 RAKQMRFL QRGFSHR+I+ A + Sbjct: 121 ERAKQMRFLLQRGFSHRAIQAAVK 144 >ref|YP_001354550.1| RecX regulatory protein [Janthinobacterium sp. Marseille] sp|A6T203.1|RECX_JANMA RecName: Full=Regulatory protein recX gb|ABR88295.1| RecX regulatory protein [Janthinobacterium sp. Marseille] Length = 151 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 95/151 (62%), Positives = 115/151 (76%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 M + +SLKARAL+YLS+REHSR EL RKLA +AQEGDD+EALL LE ++FLSQ RFSE Sbjct: 1 MAKLQVSLKARALRYLSAREHSRQELGRKLARHAQEGDDVEALLDTLEAAKFLSQSRFSE 60 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 SLVHRRAAR+GN RILSEL HGI+ +++ D+KA+L + E RA V RKF + E Sbjct: 61 SLVHRRAARFGNSRILSELKSHGIDPDSLTDIKANLESDEFARARAVWERKFGTVATNQE 120 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTAWLDED 151 RAKQMRFL QRGFSHR+I+ A + A DED Sbjct: 121 ERAKQMRFLMQRGFSHRAIQAAMRAAGKDED 151 >ref|YP_001100870.1| RecX family regulatory protein [Herminiimonas arsenicoxydans] sp|A4G8B2.1|RECX_HERAR RecName: Full=Regulatory protein recX emb|CAL62749.1| Regulatory protein RecX [Herminiimonas arsenicoxydans] Length = 151 Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 93/151 (61%), Positives = 114/151 (75%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 M + +SLKARAL+YLS+REHSR ELARKLA YAQEGDDIEALL LE + F+S+ RFSE Sbjct: 1 MAKLQVSLKARALRYLSAREHSRQELARKLARYAQEGDDIEALLDTLEAANFMSEARFSE 60 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 SLV+RRAAR+GN RILSEL H I+ +++ ++KA LA E RA +V RKF +DA Sbjct: 61 SLVNRRAARFGNSRILSELKSHNIDPDSLTEIKAALAQDEVARAREVWTRKFGVAASDAN 120 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTAWLDED 151 RAKQMRFL QRGFSHR+I+ A + +ED Sbjct: 121 GRAKQMRFLLQRGFSHRAIQAAMRAKEENED 151 >ref|YP_002258800.1| regulatory protein recx [Ralstonia solanacearum IPO1609] emb|CAQ60725.1| regulatory protein recx [Ralstonia solanacearum IPO1609] Length = 159 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 83/157 (52%), Positives = 105/157 (66%), Gaps = 3/157 (1%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 +PR P+SLKARAL YLS REHSR EL RKLAP+A+ D++EALL WLE +LS RF+E Sbjct: 3 LPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESADEVEALLDWLEGENWLSNARFAE 62 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 S+VHRRA RYG R++ EL H ++ +A+ ++KA L A EA RA V R+F PP D Sbjct: 63 SVVHRRAGRYGTARLMQELKTHQLDDQALGEVKAQLQASEAARAKAVWERRFGRPPVDMA 122 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTA---WLDEDEPS 154 RAKQ+RF+ RGFS + Q A D DEP+ Sbjct: 123 ERAKQVRFMMARGFSRAVVSRIIQGADELLDDSDEPA 159 >emb|CAQ56863.1| regulatory protein recx [Ralstonia solanacearum MolK2] Length = 159 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 83/156 (53%), Positives = 104/156 (66%), Gaps = 3/156 (1%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 +PR P+SLKARAL YLS REHSR EL RKLAP+A+ D++EALL WLE +LS RF+E Sbjct: 3 LPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESADEVEALLDWLEGENWLSNARFAE 62 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 S+VHRRA RYG R++ EL H ++ +A+ ++KA L A EA RA V R+F PP D Sbjct: 63 SVVHRRAGRYGTARLMQELKTHQLDDQALGEVKAQLQASEAARAKAVWERRFGRPPVDMA 122 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTA---WLDEDEP 153 RAKQ+RF+ RGFS + Q A D DEP Sbjct: 123 ERAKQVRFMMARGFSRAVVSRIIQGADELLDDSDEP 158 >ref|YP_003753428.1| recombination regulator RecX (Modulates recA activity) [Ralstonia solanacearum PSI07] emb|CBJ52169.1| recombination regulator RecX (Modulates recA activity) [Ralstonia solanacearum PSI07] emb|CCA80075.1| recombination regulator RecX (Modulates recA activity) [blood disease bacterium R229] Length = 159 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 80/146 (54%), Positives = 99/146 (67%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 +PR P+SLKARAL YLS REHSR EL RKLAP+A+ D++EALL WLE +LS RF+E Sbjct: 3 LPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESADEVEALLDWLEGENWLSNARFAE 62 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 S+VHRRA RYG R++ EL H + EA+ ++KA L A E RA V R+F PPAD Sbjct: 63 SVVHRRAGRYGTARLMQELKTHELGDEALGEVKAQLQASETARAKAVWERRFGRPPADMA 122 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTA 146 RAKQ+RF+ RGFS + Q A Sbjct: 123 ERAKQVRFMMARGFSRAVVSRIIQGA 148 >gb|AEG70120.1| recombinase X [Ralstonia solanacearum Po82] Length = 159 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/156 (53%), Positives = 105/156 (67%), Gaps = 3/156 (1%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 +PR P+SLKARAL YLS REHSR EL RKLAP+A+ D++E LL WLE +LS RF+E Sbjct: 3 LPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESADEVETLLDWLEGENWLSNARFAE 62 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 S+VHRRA RYG R++ EL H ++ +A+ ++KA L A EA RA V R+F PP D Sbjct: 63 SVVHRRAGRYGTARLMQELKTHQLDDQALGEVKAQLQASEAARAKAVWERRFGHPPVDMA 122 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTA--WLDE-DEP 153 RAKQ+RF+ RGFS + Q A LD+ DEP Sbjct: 123 ERAKQVRFMMARGFSRAVVSRIIQGADELLDDGDEP 158 >ref|YP_003746689.1| recombination regulator recx (modulates reca activity) [Ralstonia solanacearum CFBP2957] emb|CBJ44103.1| recombination regulator RecX (Modulates recA activity) [Ralstonia solanacearum CFBP2957] Length = 159 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 79/146 (54%), Positives = 100/146 (68%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 +PR P+SLKARAL YLS REHSR EL RKLAP+A+ D++EALL WLE +LS RF+E Sbjct: 3 LPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESADEVEALLDWLEGENWLSNARFAE 62 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 S+VHRRA RYG R++ EL H ++ +A+ ++KA L A EA RA V R+F PP D Sbjct: 63 SVVHRRAGRYGTARLMQELKTHQLDDQALGEVKAQLQASEAARAKAVWERRFGRPPVDMA 122 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTA 146 RAKQ+RF+ RGFS + Q A Sbjct: 123 ERAKQVRFMVARGFSRAVVSRIIQGA 148 >emb|CCA88932.1| recombination regulator RecX (Modulates recA activity) [Ralstonia syzygii R24] Length = 159 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 80/146 (54%), Positives = 99/146 (67%) Query: 1 MPRPPISLKARALKYLSSREHSRLELARKLAPYAQEGDDIEALLQWLEQSRFLSQERFSE 60 +PR P+SLKARAL YLS REHSR EL RKLAP+A+ D++EALL WLE +LS RF+E Sbjct: 3 LPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESADEVEALLDWLEGENWLSNARFAE 62 Query: 61 SLVHRRAARYGNQRILSELHGHGIEGEAIADLKADLAAGEAERAAQVLRRKFTAPPADAE 120 S+VHRRA RYG R++ EL H + EA+ ++KA L A E RA V R+F PPAD Sbjct: 63 SVVHRRAGRYGTARLMQELKTHELGDEALGEVKAQLQASETARAKAVWARRFGRPPADMV 122 Query: 121 TRAKQMRFLQQRGFSHRSIREAFQTA 146 RAKQ+RF+ RGFS + Q A Sbjct: 123 ERAKQVRFMMARGFSRAVVSRIIQGA 148