BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0170.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774078.1| nitrate/sulfonate/bicarbonate ABC transporte... 659 0.0 ref|ZP_08504077.1| ABC-type nitrate/sulfonate/bicarbonate transp... 463 e-128 ref|YP_001354306.1| ABC-type nitrate/sulfonate/bicarbonate trans... 459 e-127 ref|ZP_08184182.1| ABC transporter, substrate-binding protein, a... 439 e-121 ref|NP_641201.1| sulfonate-binding protein [Xanthomonas axonopod... 425 e-117 ref|ZP_06704675.1| sulfonate binding protein [Xanthomonas fuscan... 421 e-116 ref|ZP_06730980.1| sulfonate binding protein [Xanthomonas fuscan... 418 e-115 ref|ZP_03265700.1| aliphatic sulfonates family ABC transporter, ... 414 e-113 ref|ZP_08405107.1| aliphatic sulfonate ABC transporter periplasm... 412 e-113 ref|YP_001347062.1| hypothetical protein PSPA7_1678 [Pseudomonas... 410 e-112 >ref|YP_003774078.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62170.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/328 (99%), Positives = 328/328 (100%) Query: 1 MHRRDFLRLAPAALGVTALGGIPLLSSAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLK 60 MHRRDFLRLAPAALGVTALGGIPLLSSAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLK Sbjct: 1 MHRRDFLRLAPAALGVTALGGIPLLSSAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLK 60 Query: 61 AQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL 120 AQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL Sbjct: 61 AQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL 120 Query: 121 AVGKESPVKSISELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE 180 AVGKESPVKSI+ELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE Sbjct: 121 AVGKESPVKSINELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE 180 Query: 181 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYE 240 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYE Sbjct: 181 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYE 240 Query: 241 RARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAAPILLEE 300 RARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAAPILLEE Sbjct: 241 RARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAAPILLEE 300 Query: 301 DLVKSGTDLPRTINALIDPSYAQGVVRA 328 DLVKSGTDLPRTINALIDPSYAQGVVRA Sbjct: 301 DLVKSGTDLPRTINALIDPSYAQGVVRA 328 >ref|ZP_08504077.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Methyloversatilis universalis FAM5] gb|EGK72625.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Methyloversatilis universalis FAM5] Length = 331 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 219/300 (73%), Positives = 260/300 (86%) Query: 27 SAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLKAQGTEVKWVLSQGSNRALEYLNSDSV 86 +A PK IRLDYAYYSP SLVL++FGWLE+ +K G EVKW LSQGSNRALE+LNS ++ Sbjct: 28 AAGDAPKEIRLDYAYYSPTSLVLKRFGWLEQAVKPAGIEVKWTLSQGSNRALEFLNSGAI 87 Query: 87 DFGSTAGLAALLARANGNPVKAVYIYSRPEWTALAVGKESPVKSISELKGKKIAATKGTD 146 DFGSTAGLAA+L+RANGNP+++VY+YSRPEWTALAV K+S +KS++ELKGK+IAATKGTD Sbjct: 88 DFGSTAGLAAVLSRANGNPIRSVYVYSRPEWTALAVPKDSTIKSVAELKGKRIAATKGTD 147 Query: 147 PYLFLLRALHENGLKKSDVEIVHLQHADGRAALEQGRVAAWAGLDPHLAASELEAGSRLI 206 PYLFLLR+LHE GL ++DVEIVHLQH DGR ALEQ RV AWAGLDPHLAASELEAGS+LI Sbjct: 148 PYLFLLRSLHEAGLSRNDVEIVHLQHPDGRVALEQKRVDAWAGLDPHLAASELEAGSKLI 207 Query: 207 YRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYERARSWIIAHPDETVALLSEESKLSAP 266 YRNVNFNTYGFLNVS+ F HPDQVK VIAAYERAR W+IA+PDE +L+EE+KL+ P Sbjct: 208 YRNVNFNTYGFLNVSEKFLKAHPDQVKTVIAAYERARRWVIANPDEAAKILAEEAKLNLP 267 Query: 267 VARLQLKRNDFSQPQIGREHIEALRAAAPILLEEDLVKSGTDLPRTINALIDPSYAQGVV 326 VA+ QLKR DFS P+IGREH +ALRAAAPIL+EE+LV+ GTD+ + + LIDPS+A V+ Sbjct: 268 VAQAQLKRTDFSNPRIGREHHDALRAAAPILVEEELVRKGTDVAKVVTELIDPSHAAAVL 327 >ref|YP_001354306.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component [Janthinobacterium sp. Marseille] gb|ABR90065.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component [Janthinobacterium sp. Marseille] Length = 332 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 221/326 (67%), Positives = 272/326 (83%), Gaps = 2/326 (0%) Query: 1 MHRRDFLRLAPAALGVTALG-GIPLLSSAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDL 59 M RR F++ A L + L + L + AA P+ IRLDYAYYSP SLVL+ FGWLEE + Sbjct: 1 MDRRFFIK-NTALLTLAGLSTSVSLSAHAAAAPEEIRLDYAYYSPTSLVLKHFGWLEEQV 59 Query: 60 KAQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTA 119 K+ G +VKW LSQGSNRALEYL+++S+DFGSTAGLAA+L+RANGNP+K+VY+YSRPEWTA Sbjct: 60 KSSGIKVKWTLSQGSNRALEYLSANSIDFGSTAGLAAVLSRANGNPIKSVYVYSRPEWTA 119 Query: 120 LAVGKESPVKSISELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAAL 179 L V K+SP+K++++LKGKKIAATKGTDPYLFLLR L NGLKKSDVEIVHLQHADGRAAL Sbjct: 120 LLVPKDSPIKTVADLKGKKIAATKGTDPYLFLLRTLKVNGLKKSDVEIVHLQHADGRAAL 179 Query: 180 EQGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAY 239 E GR+ AWAGLDPH+A+SEL+AGSRL+YRNV FNTYGFLNV++ FA ++P+QVK+V+ AY Sbjct: 180 ESGRIDAWAGLDPHMASSELQAGSRLLYRNVAFNTYGFLNVTEDFAKKYPEQVKQVLQAY 239 Query: 240 ERARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAAPILLE 299 ERAR WI+A+P E + ++E+K+S VA++QL R DFS P IGREH EAL+AAAPILL+ Sbjct: 240 ERARLWILANPREASQIQADEAKISLAVAKVQLNRTDFSNPYIGREHREALQAAAPILLQ 299 Query: 300 EDLVKSGTDLPRTINALIDPSYAQGV 325 EDLVK GTDL + IN LIDPS+ Q + Sbjct: 300 EDLVKKGTDLNKVINDLIDPSFVQSL 325 >ref|ZP_08184182.1| ABC transporter, substrate-binding protein, aliphatic sulfonates family [Xanthomonas gardneri ATCC 19865] gb|EGD18195.1| ABC transporter, substrate-binding protein, aliphatic sulfonates family [Xanthomonas gardneri ATCC 19865] Length = 334 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 223/328 (67%), Positives = 261/328 (79%), Gaps = 8/328 (2%) Query: 1 MHRRDFLRLAPAALGVTALGGIPLLSSA--AQP----PKVIRLDYAYYSPPSLVLRKFGW 54 M RR+ L+ L ALG PLLS A AQ PK +RLDYAYYSP SLVL+ FGW Sbjct: 1 MKRRNLLKFG--TLAGVALGTSPLLSRATLAQANGAVPKQLRLDYAYYSPTSLVLKHFGW 58 Query: 55 LEEDLKAQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSR 114 LE+ LKAQGT+VKWVLS GSNRALEYL +S+DFGSTAGLA+LLARANGNP+KAVYIYSR Sbjct: 59 LEQALKAQGTQVKWVLSAGSNRALEYLGGNSIDFGSTAGLASLLARANGNPIKAVYIYSR 118 Query: 115 PEWTALAVGKESPVKSISELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHAD 174 PEW ALAVGK SP++ ++ELKGK+IAATKGTD YLFLLRAL + GL K+ VEIVHLQH D Sbjct: 119 PEWIALAVGKNSPIRQLTELKGKRIAATKGTDAYLFLLRALRQAGLSKNAVEIVHLQHPD 178 Query: 175 GRAALEQGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKR 234 GR ALE+G V AW+GLDPHLAAS++EAG+RLIYRNV FN+ GFLNVS++FAA +PDQ+ Sbjct: 179 GRTALERGDVDAWSGLDPHLAASQIEAGTRLIYRNVAFNSRGFLNVSETFAAAYPDQIPL 238 Query: 235 VIAAYERARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAA 294 VI AYE+AR W IAHPDE AL++ E++LS VA LQL+R D P IG E AL++AA Sbjct: 239 VIQAYEKARKWAIAHPDELAALIATEARLSLQVATLQLQRTDLRNPVIGPEERAALQSAA 298 Query: 295 PILLEEDLVKSGTDLPRTINALIDPSYA 322 PILLEE LV+ GTDL + + ALIDPSYA Sbjct: 299 PILLEEGLVRPGTDLTKVLAALIDPSYA 326 >ref|NP_641201.1| sulfonate-binding protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM35737.1| sulfonate binding protein [Xanthomonas axonopodis pv. citri str. 306] Length = 334 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 221/336 (65%), Positives = 262/336 (77%), Gaps = 10/336 (2%) Query: 1 MHRRDFLRLAPAALGVTALGGIPLLSSAA------QPPKVIRLDYAYYSPPSLVLRKFGW 54 M RR+ L+ L ALG PLLS A PK +R+DYAYYSP SLVL+ FGW Sbjct: 1 MKRRNLLKFG--TLAGVALGAPPLLSGTAFAQTKGAVPKQLRMDYAYYSPTSLVLKHFGW 58 Query: 55 LEEDLKAQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSR 114 LEE LKAQGT+VKWVLS GSNRALEYL +S+DFGSTAGLA+LLARANGNP+KAVYIYSR Sbjct: 59 LEETLKAQGTQVKWVLSAGSNRALEYLGGNSIDFGSTAGLASLLARANGNPIKAVYIYSR 118 Query: 115 PEWTALAVGKESPVKSISELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHAD 174 PEW ALAVGK SP++ ++ELKGK+IAATKGTD YLFLLRAL + GL KS V+IVHLQH D Sbjct: 119 PEWIALAVGKNSPIRQLTELKGKRIAATKGTDAYLFLLRALRQAGLSKSAVDIVHLQHPD 178 Query: 175 GRAALEQGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKR 234 GR ALE+G V AW+GLDPHLAAS++EAGSRLIYRN FN+ GFLNVS++FA+ +P+Q+ Sbjct: 179 GRTALERGDVDAWSGLDPHLAASQIEAGSRLIYRNTAFNSRGFLNVSETFASAYPEQIPL 238 Query: 235 VIAAYERARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAA 294 VI AYE+AR+W IAHP E AL++ E++LS VA LQL+R D P IG E AL++AA Sbjct: 239 VIQAYEKARTWAIAHPGELAALIAAEARLSPQVATLQLQRTDLRNPVIGPEERAALQSAA 298 Query: 295 PILLEEDLVKSGTDLPRTINALIDPSYAQ--GVVRA 328 PILLEE LV+ GTDL + + LIDPSYA+ GV RA Sbjct: 299 PILLEEGLVRPGTDLGKVLAGLIDPSYAKRAGVARA 334 >ref|ZP_06704675.1| sulfonate binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gb|EFF43732.1| sulfonate binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 334 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 219/336 (65%), Positives = 262/336 (77%), Gaps = 10/336 (2%) Query: 1 MHRRDFLRLAPAALGVTALGGIPLLSSAA------QPPKVIRLDYAYYSPPSLVLRKFGW 54 M RR+ L+ L ALG PLLS A P+ +R+DYAYYSP SLVL+ FGW Sbjct: 1 MKRRNLLKFG--TLAGVALGAPPLLSGTAFAQTKGAVPEQLRMDYAYYSPTSLVLKHFGW 58 Query: 55 LEEDLKAQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSR 114 LEE LKAQGT+VKWVLS GSNRALEYL +S+DFGSTAGLA+LLARANGNP+KAVYIYSR Sbjct: 59 LEETLKAQGTQVKWVLSAGSNRALEYLGGNSIDFGSTAGLASLLARANGNPIKAVYIYSR 118 Query: 115 PEWTALAVGKESPVKSISELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHAD 174 PEW ALAVG+ SP++ ++ELKGK+IAATKGTD YLFLLRAL + GL KS V+IVHLQH D Sbjct: 119 PEWIALAVGRNSPIRQLTELKGKRIAATKGTDAYLFLLRALRQAGLSKSAVDIVHLQHPD 178 Query: 175 GRAALEQGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKR 234 GR ALE+G V AW+GLDPHLAAS++EAGSRLIYRN FN+ GFLNVS++FA+ +P+Q+ Sbjct: 179 GRTALERGDVDAWSGLDPHLAASQIEAGSRLIYRNTAFNSRGFLNVSETFASAYPEQIPL 238 Query: 235 VIAAYERARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAA 294 VI AYE+AR W IAHP E AL++ E++LS VA LQL+R D P IG E AL++AA Sbjct: 239 VIQAYEKARKWAIAHPGELAALIAAEARLSPQVATLQLQRTDLRNPVIGPEERAALQSAA 298 Query: 295 PILLEEDLVKSGTDLPRTINALIDPSYAQ--GVVRA 328 PILLEE LV+ GTDL + + ALIDPSYA+ GV +A Sbjct: 299 PILLEEGLVRPGTDLGKVLAALIDPSYAKRAGVAQA 334 >ref|ZP_06730980.1| sulfonate binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gb|EFF47923.1| sulfonate binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 334 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 218/336 (64%), Positives = 261/336 (77%), Gaps = 10/336 (2%) Query: 1 MHRRDFLRLAPAALGVTALGGIPLLSSAA------QPPKVIRLDYAYYSPPSLVLRKFGW 54 M RR+ L+ L ALG PLLS A P+ +R+DYAYYSP SLVL+ FGW Sbjct: 1 MKRRNLLKFG--TLAGVALGAPPLLSGTAFAQTKGAVPEQLRMDYAYYSPTSLVLKHFGW 58 Query: 55 LEEDLKAQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSR 114 LEE LKAQGT+VKWVLS GSN ALEYL +S+DFGSTAGLA+LLARANGNP+KAVYIYSR Sbjct: 59 LEETLKAQGTQVKWVLSAGSNHALEYLGGNSIDFGSTAGLASLLARANGNPIKAVYIYSR 118 Query: 115 PEWTALAVGKESPVKSISELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHAD 174 PEW ALAVG+ SP++ ++ELKGK+IAATKGTD YLFLLRAL + GL KS V+IVHLQH D Sbjct: 119 PEWIALAVGRNSPIRQLTELKGKRIAATKGTDAYLFLLRALRQAGLSKSAVDIVHLQHPD 178 Query: 175 GRAALEQGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKR 234 GR ALE+G V AW+GLDPHLAAS++EAGSRLIYRN FN+ GFLNVS++FA+ +P+Q+ Sbjct: 179 GRTALERGDVDAWSGLDPHLAASQIEAGSRLIYRNTAFNSRGFLNVSETFASAYPEQIPL 238 Query: 235 VIAAYERARSWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAA 294 VI AYE+AR W IAHP E AL++ E++LS VA LQL+R D P IG E AL++AA Sbjct: 239 VIQAYEKARKWAIAHPGELAALIAAEARLSPQVATLQLQRTDLRNPVIGPEERAALQSAA 298 Query: 295 PILLEEDLVKSGTDLPRTINALIDPSYAQ--GVVRA 328 PILLEE LV+ GTDL + + ALIDPSYA+ GV +A Sbjct: 299 PILLEEGLVRPGTDLGKVLAALIDPSYAKRAGVAQA 334 >ref|ZP_03265700.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Burkholderia sp. H160] gb|EEA02672.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Burkholderia sp. H160] Length = 359 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 198/321 (61%), Positives = 254/321 (79%), Gaps = 2/321 (0%) Query: 6 FLRLAPAALGVTALGGIPLLSSAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLKAQGTE 65 +L+ A AAL V G ++ A P + ++LDYAYYSP SLV+++ GWLE++ A T+ Sbjct: 33 WLKTAAAALAVGLFGAAH--TAHAAPLEELKLDYAYYSPESLVIKRNGWLEQEFAADHTQ 90 Query: 66 VKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTALAVGKE 125 VKWVLS GSNRALEYLNS ++D GSTAGLAA+L +ANGNP++AVYI+SRPEWTAL V K Sbjct: 91 VKWVLSLGSNRALEYLNSGAIDIGSTAGLAAVLGKANGNPIRAVYIFSRPEWTALVVRKN 150 Query: 126 SPVKSISELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALEQGRVA 185 SP+K++++LKGKKIAATKGTDP+LF LRALH GL + DVEIV+LQH DGR AL G+V Sbjct: 151 SPIKTLADLKGKKIAATKGTDPFLFTLRALHTAGLSRDDVEIVNLQHPDGRTALANGQVD 210 Query: 186 AWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYERARSW 245 AWAGLDPH+AA++++ G+RL+YRNV+FNT+GFLN + F HPD + RV+ YE+AR W Sbjct: 211 AWAGLDPHMAAAQIDDGARLLYRNVDFNTWGFLNAREDFIREHPDALARVLKVYEKARVW 270 Query: 246 IIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAAPILLEEDLVKS 305 I AHPD+T +++EESK++ PVA+LQL RNDFSQPQ G I AL+AAAPIL++E LVKS Sbjct: 271 IAAHPDDTAQIVAEESKVTVPVAKLQLSRNDFSQPQPGARQIAALKAAAPILVDEQLVKS 330 Query: 306 GTDLPRTINALIDPSYAQGVV 326 GTDL I+AL+D + AQ V+ Sbjct: 331 GTDLSAIIDALVDSNVAQPVI 351 >ref|ZP_08405107.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Hylemonella gracilis ATCC 19624] gb|EGI77728.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Hylemonella gracilis ATCC 19624] Length = 336 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 205/329 (62%), Positives = 254/329 (77%), Gaps = 6/329 (1%) Query: 1 MHRRDFLRLAPAALGVTALGGIPLLSSAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLK 60 M RR L A AA VT +P + AA P K +RLDYA YSP SLVLR+FGWLE+D K Sbjct: 12 MKRRTLLS-AGAAAAVT----VPFFARAADPLKELRLDYATYSPSSLVLRRFGWLEDDFK 66 Query: 61 AQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL 120 G VKWV S GSNRALEYLNS+SVD GS+AGLAA+L++ANGNP++ YI+SRPEWTAL Sbjct: 67 KDGVGVKWVFSAGSNRALEYLNSNSVDIGSSAGLAAVLSKANGNPIRTPYIFSRPEWTAL 126 Query: 121 AVGKESPVKSISELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE 180 V K+SP+KS+++LKGKK+AATKGTDP+LFLLRAL GLK+ D+EIV LQHADGRAALE Sbjct: 127 VVRKDSPIKSVADLKGKKVAATKGTDPFLFLLRALPLFGLKRGDIEIVALQHADGRAALE 186 Query: 181 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYE 240 QGRV AWAGLDP +AASEL+AGSRLIYRNV FNTYGFLNV F P V+RVIA YE Sbjct: 187 QGRVDAWAGLDPLMAASELDAGSRLIYRNVGFNTYGFLNVRQDFLQDQPAAVRRVIAGYE 246 Query: 241 RARSWIIAHPDETVALLSEESKLSAPVARLQL-KRNDFSQPQIGREHIEALRAAAPILLE 299 RAR WI+A+P+E +L++E+K+ VA++QL +R D S P +EH++AL+AAAP+LL Sbjct: 247 RARKWILANPEEAAKILADEAKIKIEVAKVQLSQRTDLSNPLPSKEHVDALQAAAPVLLA 306 Query: 300 EDLVKSGTDLPRTINALIDPSYAQGVVRA 328 E+LV+ TD+ + + L+D +A+ VV A Sbjct: 307 EELVRPNTDVAKVVLDLVDTQFARSVVNA 335 >ref|YP_001347062.1| hypothetical protein PSPA7_1678 [Pseudomonas aeruginosa PA7] gb|ABR84179.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 334 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/310 (63%), Positives = 246/310 (79%), Gaps = 2/310 (0%) Query: 19 LGGIPLLSSA--AQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLKAQGTEVKWVLSQGSNR 76 L +PL ++A A P IRLDYAYY+P SL LRKFGWLE+ L GT V+WV SQGSNR Sbjct: 15 LAVLPLFATAEAADVPAEIRLDYAYYAPTSLALRKFGWLEKSLDGSGTRVRWVFSQGSNR 74 Query: 77 ALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTALAVGKESPVKSISELKG 136 +LEYLN+ SVDF STAGLAA+LARANG+PV+ VY+ SRPEWTAL V K+SP++S++ELKG Sbjct: 75 SLEYLNAGSVDFASTAGLAAVLARANGSPVRTVYVASRPEWTALLVRKDSPIRSLAELKG 134 Query: 137 KKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALEQGRVAAWAGLDPHLAA 196 +K+AATKGTDPYLFLLR+LH GL K+D+ +VHLQH DGR ALE+G+V AWAGLDPH+AA Sbjct: 135 RKVAATKGTDPYLFLLRSLHSVGLDKNDLRVVHLQHPDGRVALEKGQVDAWAGLDPHMAA 194 Query: 197 SELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYERARSWIIAHPDETVAL 256 SEL+AGSRL+YRN+ FN+YG LNV + FA RHP +++V+AAYE+AR W+I HPDE L Sbjct: 195 SELQAGSRLLYRNLGFNSYGVLNVREDFAERHPQLIRQVLAAYEQARHWLIGHPDEAAQL 254 Query: 257 LSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAAPILLEEDLVKSGTDLPRTINAL 316 L+EE+ L VARLQL R DFSQP G E + AL+AAAPIL +E LV+ G D+ + ++ L Sbjct: 255 LAEEAGLPLEVARLQLSRTDFSQPLPGAEQVAALKAAAPILADERLVRPGVDVQKVVDEL 314 Query: 317 IDPSYAQGVV 326 I P +A V+ Sbjct: 315 IAPQWAAEVI 324