BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0165.p (237 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774073.1| two component response regulator protein [He... 469 e-130 ref|YP_004754468.1| response regulators consisting of a CheY-lik... 422 e-116 ref|YP_001100873.1| OmpR family response regulator [Herminiimona... 419 e-115 ref|ZP_08273335.1| Response regulators consisting of a CheY-like... 416 e-114 ref|YP_001354553.1| two-components system response regulator [Ja... 415 e-114 ref|ZP_02480406.1| DNA-binding response regulator [Burkholderia ... 395 e-108 ref|YP_001057860.1| DNA-binding response regulator [Burkholderia... 394 e-108 ref|ZP_02504825.1| DNA-binding response regulator [Burkholderia ... 394 e-108 ref|ZP_02469986.1| two component transcriptional regulator, wing... 394 e-108 ref|ZP_02488673.1| DNA-binding response regulator [Burkholderia ... 393 e-107 >ref|YP_003774073.1| two component response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62165.1| two component response regulator protein [Herbaspirillum seropedicae SmR1] Length = 237 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 237/237 (100%), Positives = 237/237 (100%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAALAASNNAA 237 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAALAASNNAA Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAALAASNNAA 237 >ref|YP_004754468.1| response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein [Collimonas fungivorans Ter331] gb|AEK63645.1| Response regulators consisting of a CheY-like receiver domain protein and a winged-helix DNA-binding domain protein [Collimonas fungivorans Ter331] Length = 247 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 210/223 (94%), Positives = 217/223 (97%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGYA DCV NG+EADSALSTQDFDLLILDLGLPKM+GL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYATDCVMNGMEADSALSTQDFDLLILDLGLPKMTGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNSRLPVLILTAADS+EQRV+GLDLGADDYMAKPF LSELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSRLPVLILTAADSLEQRVKGLDLGADDYMAKPFELSELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVI+HGPLSYDQVGRIAYI EQML+LSARELGLLEVLLQRTGRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIKHGPLSYDQVGRIAYINEQMLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPE 223 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEK+ E Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKISE 223 >ref|YP_001100873.1| OmpR family response regulator [Herminiimonas arsenicoxydans] emb|CAL62752.1| Transcriptional regulatory protein TctD [Herminiimonas arsenicoxydans] Length = 233 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 207/224 (92%), Positives = 216/224 (96%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGY DCVKNGVEADSALSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYVTDCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRALTRRGA Sbjct: 61 EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVI+HGPLSYDQVGRIAYI +QMLELSARELGLLEVLLQR+GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIKHGPLSYDQVGRIAYINDQMLELSARELGLLEVLLQRSGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEA 224 W EEVSNNAIEVYVHRLRKKIE+GG+RIATVRGLGYCLEK EA Sbjct: 181 WSEEVSNNAIEVYVHRLRKKIEIGGLRIATVRGLGYCLEKFAEA 224 >ref|ZP_08273335.1| Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Oxalobacteraceae bacterium IMCC9480] gb|EGF33207.1| Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Oxalobacteraceae bacterium IMCC9480] Length = 228 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/228 (91%), Positives = 216/228 (94%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGYA DCV NGVEAD ALSTQDFDLLILDLGLP+MSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYATDCVHNGVEADLALSTQDFDLLILDLGLPRMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLR+LRARNS LPVLILTAADS+EQRV+GLDLGADDYMAKPFALSELEARVRALTRRG Sbjct: 61 EVLRKLRARNSHLPVLILTAADSIEQRVKGLDLGADDYMAKPFALSELEARVRALTRRGV 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHGPLSYDQVGRIAYI EQML+LSARELGLLEVLLQRTGRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGPLSYDQVGRIAYINEQMLDLSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAA 228 WGEEVSNNAIEVYVHRLRKKIE+GGVRIATVRGLGYCLEK +A A Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIELGGVRIATVRGLGYCLEKYIDAPAAT 228 >ref|YP_001354553.1| two-components system response regulator [Janthinobacterium sp. Marseille] gb|ABR89837.1| two-components system response regulator [Janthinobacterium sp. Marseille] Length = 233 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 204/224 (91%), Positives = 214/224 (95%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRILLAEDDSVLADGLTRSLR SGYA DCVKNG EADS LSTQDFDLLILDLGLPKMSGL Sbjct: 1 MRILLAEDDSVLADGLTRSLRQSGYATDCVKNGAEADSVLSTQDFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRALTRRGA Sbjct: 61 EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTVI+HGPLSYDQVGRIAYI +QML+LSARELGLLEVLLQR+GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVIKHGPLSYDQVGRIAYINDQMLDLSARELGLLEVLLQRSGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEA 224 W EEVSNNAIEVYVHRLRKKIE+GG+RIATVRGLGYCLEK E Sbjct: 181 WSEEVSNNAIEVYVHRLRKKIEIGGLRIATVRGLGYCLEKFTET 224 >ref|ZP_02480406.1| DNA-binding response regulator [Burkholderia pseudomallei 7894] Length = 237 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 200/237 (84%), Positives = 215/237 (90%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLP+MSGL Sbjct: 1 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPRMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E+MLELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGSLSFDQVGRIAYANERMLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAALAASNNAA 237 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG + A A+ + A Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAGASDAPNAAASPA 237 >ref|YP_001057860.1| DNA-binding response regulator [Burkholderia pseudomallei 668] gb|ABN82550.1| DNA-binding response regulator [Burkholderia pseudomallei 668] Length = 247 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 198/225 (88%), Positives = 209/225 (92%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLPKMSGL Sbjct: 1 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPKMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E+MLELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGSLSFDQVGRIAYANERMLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAG 225 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAG 225 >ref|ZP_02504825.1| DNA-binding response regulator [Burkholderia pseudomallei BCC215] Length = 239 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 197/225 (87%), Positives = 209/225 (92%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLP+MSGL Sbjct: 1 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPRMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E+MLELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGSLSFDQVGRIAYANERMLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAG 225 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAG 225 >ref|ZP_02469986.1| two component transcriptional regulator, winged helix family protein [Burkholderia pseudomallei B7210] Length = 240 Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust. Identities = 199/237 (83%), Positives = 215/237 (90%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLP+MSGL Sbjct: 4 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPRMSGL 63 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 64 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 123 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E++LELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 124 GGGPTVVRHGSLSFDQVGRIAYANERVLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 183 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAGNAAALAASNNAA 237 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG + A A+ + A Sbjct: 184 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAGASDAPNAAASPA 240 >ref|ZP_02488673.1| DNA-binding response regulator [Burkholderia pseudomallei NCTC 13177] Length = 247 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 197/225 (87%), Positives = 209/225 (92%) Query: 1 MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60 MRIL+AEDDS+LADGLTRSLR SGYA D V+NGVEAD+ALS Q FDLLILDLGLP+MSGL Sbjct: 1 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFDLLILDLGLPRMSGL 60 Query: 61 EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTRRGA 120 EVLRRLRARNS LPVLILTAADSV++RV+GLDLGADDYMAKPFAL+ELEARVRALTRRGA Sbjct: 61 EVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 120 Query: 121 GGGPTVIRHGPLSYDQVGRIAYIGEQMLELSARELGLLEVLLQRTGRLVSKEQLVDHLCE 180 GGGPTV+RHG LS+DQVGRIAY E+MLELSARELGLLEVLLQR GRLVSKEQLVDHLCE Sbjct: 121 GGGPTVVRHGSLSFDQVGRIAYANERMLELSARELGLLEVLLQRIGRLVSKEQLVDHLCE 180 Query: 181 WGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKLPEAG 225 WGEEVSNNAIEVYVHRLRKKIE GVRI TVRGLGYCLEK AG Sbjct: 181 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAG 225