BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0107.p         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774016.1| N6-adenine-specific DNA methylase [Herbaspir...   863   0.0  
ref|YP_004754511.1| methyltransferase [Collimonas fungivorans Te...   666   0.0  
ref|YP_001100911.1| hypothetical protein HEAR2668 [Herminiimonas...   644   0.0  
ref|YP_001354592.1| N6-adenine-specific DNA methylase [Janthinob...   636   e-180
ref|ZP_08276495.1| Methyltransferase [Oxalobacteraceae bacterium...   622   e-176
ref|ZP_04577819.1| N6-adenine-specific DNA methylase [Oxalobacte...   567   e-159
ref|ZP_04579968.1| N6-adenine-specific DNA methylase [Oxalobacte...   541   e-152
ref|YP_001807336.1| putative RNA methylase [Burkholderia ambifar...   437   e-120
ref|ZP_02911533.1| putative RNA methylase [Burkholderia ambifari...   437   e-120
ref|ZP_02890660.1| putative RNA methylase [Burkholderia ambifari...   436   e-120

>ref|YP_003774016.1| N6-adenine-specific DNA methylase [Herbaspirillum seropedicae SmR1]
 gb|ADJ62108.1| N6-adenine-specific DNA methylase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 418

 Score =  863 bits (2230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/418 (99%), Positives = 418/418 (100%)

Query: 1   MQSPDTNYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQ 60
           MQSPDTNYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQ
Sbjct: 1   MQSPDTNYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQ 60

Query: 61  MNLHSRIASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLE 120
           MNLHSRIASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLE
Sbjct: 61  MNLHSRIASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLE 120

Query: 121 FTTLKIKDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWRE 180
           FTTLKIKDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWRE
Sbjct: 121 FTTLKIKDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWRE 180

Query: 181 ETGDAPLRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEK 240
           ETGDAPLRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEK
Sbjct: 181 ETGDAPLRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEK 240

Query: 241 FSNFDADAWFAIKGDFKPNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEA 300
           FSNFDADAWFAIKGDFKPNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEA
Sbjct: 241 FSNFDADAWFAIKGDFKPNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEA 300

Query: 301 QEIKPPVDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFSGW 360
           QEIKPPVDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRF+GW
Sbjct: 301 QEIKPPVDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFAGW 360

Query: 361 SVFLFSADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRREEAKPVSRDSED 418
           SVFLFSADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRREEAKPVSRDSED
Sbjct: 361 SVFLFSADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRREEAKPVSRDSED 418


>ref|YP_004754511.1| methyltransferase [Collimonas fungivorans Ter331]
 gb|AEK63688.1| Methyltransferase [Collimonas fungivorans Ter331]
          Length = 411

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/405 (77%), Positives = 353/405 (87%), Gaps = 4/405 (0%)

Query: 7   NYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQMNLHSR 66
           ++SYFCPCPRGLEAALAEELNEIAQ + PA  LKVH QVPGGVHCSG L  A+++NLHSR
Sbjct: 8   SHSYFCPCPRGLEAALAEELNEIAQFSAPAVTLKVHTQVPGGVHCSGLLSDAWRINLHSR 67

Query: 67  IASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLEFTTLKI 126
           IASRVLLR+ HG+YKNENDIYD+TL Q WE WF VSHTIRVD+TAVKSPLRSL+FTTLKI
Sbjct: 68  IASRVLLRLTHGAYKNENDIYDMTLEQEWESWFPVSHTIRVDVTAVKSPLRSLQFTTLKI 127

Query: 127 KDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWREETGDAP 186
           KD ICDRF D    RPSV+T TPDMRI GF+DAHNFT+YLDTSGEALFKRGWR ETGDAP
Sbjct: 128 KDGICDRFRDLCNERPSVDTGTPDMRIVGFLDAHNFTLYLDTSGEALFKRGWRAETGDAP 187

Query: 187 LRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEKFSNFDA 246
           LRENLAAGLLRT+GWKPG  LFDPMCGSGTIL EAAQI+AG+P GARR FAFEKF++F++
Sbjct: 188 LRENLAAGLLRTSGWKPGTVLFDPMCGSGTILVEAAQILAGIPAGARRHFAFEKFNDFES 247

Query: 247 DAWFAIKGDFKPNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEAQEIKPP 306
             W AIKG FKPNP+P TPT+FGSDISGDMV++   NL  AG+ FEVP+KQIEAQE+KPP
Sbjct: 248 AKWLAIKGSFKPNPLPATPTIFGSDISGDMVQIAANNLRNAGILFEVPVKQIEAQEVKPP 307

Query: 307 VDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFSGWSVFLFS 366
            DAE     GI+L+NPPYGERIGVRGD  L +++L   FFSAF +TLKQRF+GWS+FLFS
Sbjct: 308 ADAEH----GIMLTNPPYGERIGVRGDSTLSSDDLLTAFFSAFGTTLKQRFAGWSIFLFS 363

Query: 367 ADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRREEAKP 411
           ADLGLPKL+RLKE+RKTPFFNGALECRLFRFDMVAG+NRRE AKP
Sbjct: 364 ADLGLPKLLRLKEARKTPFFNGALECRLFRFDMVAGFNRREAAKP 408


>ref|YP_001100911.1| hypothetical protein HEAR2668 [Herminiimonas arsenicoxydans]
 emb|CAL62790.1| Putative RNA methylase [Herminiimonas arsenicoxydans]
          Length = 409

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/412 (73%), Positives = 347/412 (84%), Gaps = 5/412 (1%)

Query: 6   TNYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQMNLHS 65
           +++SYFCPCPRGLE ALAEELNEIA   G    LKVH QVPGGVHCSGTL  AY++NLHS
Sbjct: 3   SSHSYFCPCPRGLEIALAEELNEIAAAPGSGNTLKVHTQVPGGVHCSGTLQDAYRINLHS 62

Query: 66  RIASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLEFTTLK 125
           RIASRVL+RM H SY  ENDIYDLTLAQ WEDWF V HTIR+D+TA+KSPLRSLEFTTLK
Sbjct: 63  RIASRVLMRMAHASYTTENDIYDLTLAQPWEDWFAVHHTIRIDVTAIKSPLRSLEFTTLK 122

Query: 126 IKDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWREETGDA 185
           IKDAICDRF D +  RPSV+T+ PDMRI GF+DA  FT+YLDTSGEALFKRGWR +TGDA
Sbjct: 123 IKDAICDRFRDIYNERPSVDTKMPDMRIVGFLDARTFTLYLDTSGEALFKRGWRLDTGDA 182

Query: 186 PLRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEKFSNFD 245
           PLRENLAAGLLRTAGWKPG+ LFDPMCGSGTILAEAAQ++AG+PPG RR FAFEKF+ F 
Sbjct: 183 PLRENLAAGLLRTAGWKPGMTLFDPMCGSGTILAEAAQMLAGIPPGLRRNFAFEKFAGFS 242

Query: 246 ADAWFAIKGDFKPNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEAQEIKP 305
            + W AIK   K NPIP  PT+FGSDISGDMV +TR NL +AG+ F+VPLKQIEAQE+K 
Sbjct: 243 KEEWAAIKNSVKANPIPAEPTIFGSDISGDMVAMTRSNLNKAGITFDVPLKQIEAQEVKA 302

Query: 306 PVDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFSGWSVFLF 365
           P +       GI+L+NPPYGERIGVRGD  +  +++  +FFSAF +TLKQRF+GW VFLF
Sbjct: 303 PSETP-----GILLTNPPYGERIGVRGDSTIDDDDMAKEFFSAFGTTLKQRFAGWKVFLF 357

Query: 366 SADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRREEAKPVSRDSE 417
           +ADLGLPKL+RLKE+RKTPFFNGALECRLFRFDMVAG+NRRE+AKP +  +E
Sbjct: 358 TADLGLPKLLRLKEARKTPFFNGALECRLFRFDMVAGFNRREQAKPKTDAAE 409


>ref|YP_001354592.1| N6-adenine-specific DNA methylase [Janthinobacterium sp. Marseille]
 gb|ABR89664.1| N6-adenine-specific DNA methylase [Janthinobacterium sp. Marseille]
          Length = 406

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 300/406 (73%), Positives = 343/406 (84%), Gaps = 8/406 (1%)

Query: 6   TNYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQMNLHS 65
           +++SYFCPCPRGLE ALAEELNEIA        LKVH QVPGGVHCSGTL  AY++NLHS
Sbjct: 3   SSHSYFCPCPRGLEIALAEELNEIALLD---KTLKVHTQVPGGVHCSGTLQDAYRINLHS 59

Query: 66  RIASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLEFTTLK 125
           RIASRVL+RM H SY  ENDIYDLTLAQAWEDWF+V HTIR+D+TA+KSPLRSLEFTTLK
Sbjct: 60  RIASRVLMRMAHASYTTENDIYDLTLAQAWEDWFEVDHTIRIDVTAIKSPLRSLEFTTLK 119

Query: 126 IKDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWREETGDA 185
           IKDAICDRF D +  RPSV+T+ PDMRI GF+DA  FT+YLDTSGEALFKRGWR ETGDA
Sbjct: 120 IKDAICDRFRDIYNRRPSVDTKMPDMRIVGFLDARTFTLYLDTSGEALFKRGWRMETGDA 179

Query: 186 PLRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEKFSNFD 245
           PLRENLAAGLLRT+GWKPG+ LFDPMCGSGTILAEAAQ++AG+PPG  R FAFEKF+ F 
Sbjct: 180 PLRENLAAGLLRTSGWKPGMTLFDPMCGSGTILAEAAQMLAGIPPGLHRDFAFEKFAGFS 239

Query: 246 ADAWFAIKGDFKPNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEAQEIKP 305
              W AIK   KPNP+P  PT+FGSDISGDMV +TR NL +AG+ FEVPLKQIEAQE+K 
Sbjct: 240 KAEWAAIKASVKPNPLPAEPTIFGSDISGDMVAMTRNNLNKAGIRFEVPLKQIEAQEVKA 299

Query: 306 PVDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFSGWSVFLF 365
           P +       G++L+NPPYGERIGVRGD  +  +++  +FFSAF +TLKQRF+GW VFLF
Sbjct: 300 PSETP-----GVLLTNPPYGERIGVRGDSTVEADDMAKEFFSAFGTTLKQRFAGWKVFLF 354

Query: 366 SADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRREEAKP 411
           +ADLGLPKL+RLKE+RKTPFFNGALECRLFRFDMVAG+NRRE+A P
Sbjct: 355 TADLGLPKLLRLKEARKTPFFNGALECRLFRFDMVAGFNRREQAIP 400


>ref|ZP_08276495.1| Methyltransferase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30033.1| Methyltransferase [Oxalobacteraceae bacterium IMCC9480]
          Length = 406

 Score =  622 bits (1603), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 295/405 (72%), Positives = 338/405 (83%), Gaps = 8/405 (1%)

Query: 7   NYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQMNLHSR 66
           ++SYFCPCPRG+EAALAEEL EI+  +     LKVHNQVPGGVHCSG L+ AYQ+NLHSR
Sbjct: 5   SHSYFCPCPRGMEAALAEELGEISLRS---PTLKVHNQVPGGVHCSGELIDAYQVNLHSR 61

Query: 67  IASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLEFTTLKI 126
           IASRVL+RM H SY NEND+YDL LAQ WEDWF V  TIR+D+TA+KSPLRSLEFTTLKI
Sbjct: 62  IASRVLMRMAHASYLNENDVYDLALAQPWEDWFSVHRTIRIDITAIKSPLRSLEFTTLKI 121

Query: 127 KDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWREETGDAP 186
           KDAICDRF +QF  RPSV+T+ PDMRI GF+DA N T+YLDTSGEALFKRGWR +TGDAP
Sbjct: 122 KDAICDRFREQFNERPSVDTKEPDMRIVGFLDARNVTIYLDTSGEALFKRGWRLDTGDAP 181

Query: 187 LRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEKFSNFDA 246
           LRENLAAGLLR AGWKPG+ LFDPMCGSGTILAEAAQ++ G+P GARR FAFEKF  F +
Sbjct: 182 LRENLAAGLLRVAGWKPGMVLFDPMCGSGTILAEAAQMLTGIPSGARRNFAFEKFHGFLS 241

Query: 247 DAWFAIKGDFKPNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEAQEIKPP 306
           + W AIK   K NP+P  PT+FGSDISGD + +TR NL +AG+ FE+PLKQIEAQEIKPP
Sbjct: 242 EEWKAIKAAIKANPLPAEPTIFGSDISGDAIAMTRANLHQAGIPFEIPLKQIEAQEIKPP 301

Query: 307 VDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFSGWSVFLFS 366
            D     + GI+L+NPPYGERI +RGD A+P +E    FF AF +TLKQRF GW VFLF+
Sbjct: 302 SD-----VPGILLTNPPYGERIELRGDAAIPEDETARTFFDAFGTTLKQRFPGWKVFLFT 356

Query: 367 ADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRREEAKP 411
           ADL +P+L+RLKE+RKTPFFNGALECRLFRFDMV GYNRREEAKP
Sbjct: 357 ADLKVPRLLRLKEARKTPFFNGALECRLFRFDMVQGYNRREEAKP 401


>ref|ZP_04577819.1| N6-adenine-specific DNA methylase [Oxalobacter formigenes HOxBLS]
 gb|EEO28781.1| N6-adenine-specific DNA methylase [Oxalobacter formigenes HOxBLS]
          Length = 406

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 267/404 (66%), Positives = 321/404 (79%), Gaps = 8/404 (1%)

Query: 7   NYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQMNLHSR 66
           N+SYFCPCPRG+E  LA+EL EIA+++     LKVH  VPGGVHCSG L   + +NLHSR
Sbjct: 4   NHSYFCPCPRGMETVLADELREIAENS---QTLKVHQSVPGGVHCSGKLQDGWLLNLHSR 60

Query: 67  IASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLEFTTLKI 126
           IASRVLLR+   SY++E DIY L + QAWE WF V +T+R+DLT +KSPL+SL FTTL+I
Sbjct: 61  IASRVLLRIAQSSYRHEEDIYRLAVKQAWEKWFGVENTLRIDLTTIKSPLKSLNFTTLRI 120

Query: 127 KDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWREETGDAP 186
           KD + DRF  +   RPS+NT  PD+RIAGF+DAHN T+YLDTSGEALFKRGWR ETGDAP
Sbjct: 121 KDGVVDRFRSETGSRPSINTHAPDIRIAGFLDAHNVTLYLDTSGEALFKRGWRHETGDAP 180

Query: 187 LRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEKFSNFDA 246
           LRENLAAGLLRT+GWKPG+PL DPMCGSGTIL EAAQ++ G+PPG +R F+FEKF +FD 
Sbjct: 181 LRENLAAGLLRTSGWKPGMPLLDPMCGSGTILIEAAQMVQGIPPGFKRTFSFEKFRHFDQ 240

Query: 247 DAWFAIKGDFKPNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEAQEIKPP 306
             W A+K      P P  P +FGSDISGDM+ +TR NL +AGV F +PL QIEAQEIKPP
Sbjct: 241 AEWQALKDAVHITPPPAEPLIFGSDISGDMLNMTRHNLEKAGVTFSIPLHQIEAQEIKPP 300

Query: 307 VDAEGKPLVGIILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFSGWSVFLFS 366
           VD   +P  GIIL+NPPYGERIGVRG+R L T+EL +QF+ A  +TLK+RF  WSVF+F+
Sbjct: 301 VD---RP--GIILTNPPYGERIGVRGNRHLQTDELASQFYQALGATLKRRFPEWSVFVFT 355

Query: 367 ADLGLPKLMRLKESRKTPFFNGALECRLFRFDMVAGYNRREEAK 410
           ADL +PKL+RLKESRKTPF+NG +ECRLFRFDMVAG NR  + +
Sbjct: 356 ADLAVPKLLRLKESRKTPFYNGPIECRLFRFDMVAGSNRTRQPR 399


>ref|ZP_04579968.1| N6-adenine-specific DNA methylase [Oxalobacter formigenes OXCC13]
 gb|EEO30941.1| N6-adenine-specific DNA methylase [Oxalobacter formigenes OXCC13]
          Length = 393

 Score =  541 bits (1395), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 255/393 (64%), Positives = 312/393 (79%), Gaps = 8/393 (2%)

Query: 18  LEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQMNLHSRIASRVLLRMGH 77
           +E ALAEEL EIA+ +     L +H  +PGGVHCSG +   + +NL+SRIASRVLLR+  
Sbjct: 1   MEDALAEELKEIAEKS---KTLAIHQTIPGGVHCSGMIEDCWLINLYSRIASRVLLRIAQ 57

Query: 78  GSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLEFTTLKIKDAICDRFLDQ 137
            SYK+E DIY L + Q WE WF V +T+R+D+TA+KSPL+SL FTTL+IKD + DRF  Q
Sbjct: 58  SSYKSEEDIYRLAVKQPWESWFDVQNTLRIDITAIKSPLKSLNFTTLRIKDGVIDRFRSQ 117

Query: 138 FKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWREETGDAPLRENLAAGLLR 197
             +RPS+NT  PD+RIAGF+DAHN T+YLDTSGEALFKRGWR ETGDAPLRENLAAGLLR
Sbjct: 118 NGIRPSINTHAPDIRIAGFLDAHNVTLYLDTSGEALFKRGWRLETGDAPLRENLAAGLLR 177

Query: 198 TAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEKFSNFDADAWFAIKGDFK 257
            +GWKPG+PL DPMCGSGTIL EAA+++ G+PPG +R F+FEK SNFDA  W A+K   K
Sbjct: 178 ISGWKPGIPLLDPMCGSGTILIEAARMMMGIPPGYKRSFSFEKLSNFDAAKWKALKDAVK 237

Query: 258 PNPIPTTPTLFGSDISGDMVELTRKNLVRAGVHFEVPLKQIEAQEIKPPVDAEGKPLVGI 317
            NP+P  P ++GSDISGDM+ +TR NL  AGV F++PL QIEAQEIK PVD   KP  GI
Sbjct: 238 VNPVPDNPMIYGSDISGDMLTMTRHNLQEAGVPFDIPLHQIEAQEIKMPVD---KP--GI 292

Query: 318 ILSNPPYGERIGVRGDRALPTEELFAQFFSAFSSTLKQRFSGWSVFLFSADLGLPKLMRL 377
           IL+NPPYGERIGVRG+R L  +EL +QF+ A  +TLKQRF  WSVFLF+ADL +PK++RL
Sbjct: 293 ILTNPPYGERIGVRGNRNLEADELASQFYQALGTTLKQRFPNWSVFLFTADLSVPKMLRL 352

Query: 378 KESRKTPFFNGALECRLFRFDMVAGYNRREEAK 410
           KE+RKTPF+NG +ECRLFRFDMVAG NR  +++
Sbjct: 353 KEARKTPFYNGPIECRLFRFDMVAGSNRPRQSR 385


>ref|YP_001807336.1| putative RNA methylase [Burkholderia ambifaria MC40-6]
 gb|ACB63120.1| putative RNA methylase [Burkholderia ambifaria MC40-6]
          Length = 432

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/435 (53%), Positives = 278/435 (63%), Gaps = 31/435 (7%)

Query: 1   MQSPDTNYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQ 60
           M SP T Y +F PCPRGLEA LA EL EIA      A      QVPGGVH  G   A   
Sbjct: 1   MSSP-TLYEFFAPCPRGLEAVLAAELAEIAGRHLDGAPFTAGAQVPGGVHFRGGWAAGMA 59

Query: 61  MNLHSRIASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLE 120
            NLHSRIASR+LL++ H  Y+ E D+Y L L Q WE WF  + T+RVD+TA+KSPL+SLE
Sbjct: 60  ANLHSRIASRILLKIAHRPYRTEQDVYALALEQPWERWFASTQTLRVDITAIKSPLKSLE 119

Query: 121 FTTLKIKDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWRE 180
           F TL++KDAICDR  ++   RPS++T  PD+R+  F+ A   T+YLDTSGE LFKRGWR 
Sbjct: 120 FATLRVKDAICDRMREKTGSRPSIDTGAPDVRVFAFLTATECTLYLDTSGEPLFKRGWRL 179

Query: 181 ETGDAPLRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEK 240
           + G APLRENLAAG+LR  GW PG PL+DPMCGSGT LAEAAQI  GV PG  RRF FEK
Sbjct: 180 DKGAAPLRENLAAGILRLTGWTPGTPLYDPMCGSGTFLAEAAQIALGVAPGVERRFGFEK 239

Query: 241 FSNFDADAWFAIKG---DFKPNPIPTTPTL--FGSDISGDMVELTRKNLVRAGVHFEVPL 295
              +D  AW  +K    D K         L  +GSDISGDM+E  R NL RAGV   V L
Sbjct: 240 LKQYDITAWQGLKVPALDAKRAARGKREALGVYGSDISGDMLEKARANLERAGVP-SVWL 298

Query: 296 KQIEAQEIKPPVDAEGKPLVGIILSNPPYGERIGVRGD-------------------RAL 336
           KQ++A+ + PP D       GIIL+NPPYGERI VRG                    R  
Sbjct: 299 KQVDARGMTPPCDGP-----GIILANPPYGERIEVRGRSARGEVRETGRNRDNDDAFRRT 353

Query: 337 PTEELFAQFFSAFSSTLKQRFSGWSVFLFSADLGLPKLMRLKESRKTPFFNGALECRLFR 396
            T+   ++FF+A    LKQRF+GW  FL ++D  LP L+RL+ES KTP FNGALECRLFR
Sbjct: 354 HTDAPDSEFFNALGDALKQRFTGWQAFLLTSDRSLPGLLRLRESAKTPLFNGALECRLFR 413

Query: 397 FDMVAGYNRREEAKP 411
           FD++AG  +   A P
Sbjct: 414 FDLIAGSVKARPAAP 428


>ref|ZP_02911533.1| putative RNA methylase [Burkholderia ambifaria MEX-5]
 gb|EDT37337.1| putative RNA methylase [Burkholderia ambifaria MEX-5]
          Length = 432

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/435 (53%), Positives = 278/435 (63%), Gaps = 31/435 (7%)

Query: 1   MQSPDTNYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQ 60
           M SP T Y +F PCPRGLEA LA EL EIA      A      QVPGGVH  G   A   
Sbjct: 1   MSSP-TLYEFFAPCPRGLEAVLAAELAEIAGRHLDGAPFTAGAQVPGGVHFRGGWAAGMA 59

Query: 61  MNLHSRIASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLE 120
            NLHSRIASR+LL++ H  Y+NE D+Y L L Q WE WF  + T+RVD+TA+KSPL+SLE
Sbjct: 60  ANLHSRIASRILLKIAHRPYRNEQDVYALALEQPWERWFASTQTLRVDITAIKSPLKSLE 119

Query: 121 FTTLKIKDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWRE 180
           F TL++KDAICDR  ++   RPS++T  PD+R+  F+ A   T+YLDTSGE LFKRGWR 
Sbjct: 120 FATLRVKDAICDRMREKTGARPSIDTGAPDVRVFAFLTATECTLYLDTSGEPLFKRGWRL 179

Query: 181 ETGDAPLRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEK 240
           + G APLRENLAAG+LR  GW PG  L+DPMCGSGT LAEAAQI  GV PG  RRF FEK
Sbjct: 180 DKGAAPLRENLAAGILRLTGWTPGTALYDPMCGSGTFLAEAAQIALGVAPGVERRFGFEK 239

Query: 241 FSNFDADAWFAIKG---DFKPNPIPTTPTL--FGSDISGDMVELTRKNLVRAGVHFEVPL 295
              +D  AW  +K    D K         L  +GSDISGDM+E  R NL RAGV   V L
Sbjct: 240 LKQYDITAWQGLKVPALDAKRAARGKREALGVYGSDISGDMLEKARANLERAGVP-SVWL 298

Query: 296 KQIEAQEIKPPVDAEGKPLVGIILSNPPYGERIGVRGD-------------------RAL 336
           KQ++A+ + PP D       GIIL+NPPYGERI VRG                    R  
Sbjct: 299 KQVDARGMTPPCDGP-----GIILANPPYGERIEVRGRSARGEVRETGRNRDNDDAFRRT 353

Query: 337 PTEELFAQFFSAFSSTLKQRFSGWSVFLFSADLGLPKLMRLKESRKTPFFNGALECRLFR 396
            T+   ++FF+A    LKQRF+GW  FL ++D  LP L+RL+ES KTP FNGALECRLFR
Sbjct: 354 HTDAPDSEFFNALGDALKQRFTGWQAFLLTSDRSLPGLLRLRESAKTPLFNGALECRLFR 413

Query: 397 FDMVAGYNRREEAKP 411
           FD++AG  +   A P
Sbjct: 414 FDLIAGSVKARPAAP 428


>ref|ZP_02890660.1| putative RNA methylase [Burkholderia ambifaria IOP40-10]
 gb|EDT03792.1| putative RNA methylase [Burkholderia ambifaria IOP40-10]
          Length = 432

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/435 (53%), Positives = 278/435 (63%), Gaps = 31/435 (7%)

Query: 1   MQSPDTNYSYFCPCPRGLEAALAEELNEIAQHAGPAANLKVHNQVPGGVHCSGTLLAAYQ 60
           M SP T Y +F PCPRGLEA LA EL EIA      A      QVPGGVH  G   A   
Sbjct: 1   MSSP-TLYEFFAPCPRGLEAVLAAELAEIAGRHLDGAPFTAGAQVPGGVHFRGGWAAGMA 59

Query: 61  MNLHSRIASRVLLRMGHGSYKNENDIYDLTLAQAWEDWFKVSHTIRVDLTAVKSPLRSLE 120
            NLHSRIASR+LL++ H  Y+NE D+Y L L Q WE WF  + T+RVD+TA+KSPL+SLE
Sbjct: 60  ANLHSRIASRILLKIAHRPYRNEQDVYALALEQPWERWFASTQTLRVDITAIKSPLKSLE 119

Query: 121 FTTLKIKDAICDRFLDQFKLRPSVNTRTPDMRIAGFVDAHNFTVYLDTSGEALFKRGWRE 180
           F TL++KDAICDR  ++   RPS++T  PD+R+  F+ A   T+YLDTSGE LFKRGWR 
Sbjct: 120 FATLRVKDAICDRMREKTGARPSIDTGAPDVRVFAFLTATECTLYLDTSGEPLFKRGWRL 179

Query: 181 ETGDAPLRENLAAGLLRTAGWKPGVPLFDPMCGSGTILAEAAQIIAGVPPGARRRFAFEK 240
           + G APLRENLAAG+LR  GW PG  L+DPMCGSGT LAEAAQI  GV PG  RRF FEK
Sbjct: 180 DKGAAPLRENLAAGILRLTGWTPGTALYDPMCGSGTFLAEAAQIALGVAPGVERRFGFEK 239

Query: 241 FSNFDADAWFAIKG---DFKPNPIPTTPTL--FGSDISGDMVELTRKNLVRAGVHFEVPL 295
              +D  AW  +K    D K         L  +GSDISGDM+E  R NL RAGV   V L
Sbjct: 240 LKQYDITAWQGLKVPALDAKRAARGKRDALGVYGSDISGDMLEKARANLERAGVP-SVWL 298

Query: 296 KQIEAQEIKPPVDAEGKPLVGIILSNPPYGERIGVRGD-------------------RAL 336
           KQ++A+ + PP D       GIIL+NPPYGERI VRG                    R  
Sbjct: 299 KQVDARGMTPPCDGP-----GIILANPPYGERIEVRGRSARGEVRETGRNRDNDDAFRRT 353

Query: 337 PTEELFAQFFSAFSSTLKQRFSGWSVFLFSADLGLPKLMRLKESRKTPFFNGALECRLFR 396
            T+   ++FF+A    LKQRF+GW  FL ++D  LP ++RL+ES KTP FNGALECRLFR
Sbjct: 354 HTDAPDSEFFNALGDALKQRFTGWQAFLLTSDRSLPGMLRLRESAKTPLFNGALECRLFR 413

Query: 397 FDMVAGYNRREEAKP 411
           FD++AG  +   A P
Sbjct: 414 FDLIAGSVKARPAAP 428