BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0100.p (241 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774009.1| short chain dehydrogenase/reductase family p... 474 e-132 ref|YP_550150.1| short-chain dehydrogenase/reductase SDR [Polaro... 350 1e-94 ref|YP_004118460.1| short-chain dehydrogenase/reductase SDR [Pan... 333 1e-89 ref|YP_003607396.1| short-chain dehydrogenase/reductase SDR [Bur... 323 1e-86 ref|ZP_03269581.1| short-chain dehydrogenase/reductase SDR [Burk... 321 7e-86 ref|YP_002497976.1| short-chain dehydrogenase/reductase SDR [Met... 300 1e-79 ref|YP_001328115.1| short-chain dehydrogenase/reductase SDR [Sin... 273 1e-71 ref|YP_675690.1| short-chain dehydrogenase/reductase SDR [Mesorh... 269 3e-70 ref|YP_004618230.1| dehydrogenase-like protein [Ramlibacter tata... 256 2e-66 ref|ZP_01894275.1| short-chain dehydrogenase/reductase SDR [Mari... 254 8e-66 >ref|YP_003774009.1| short chain dehydrogenase/reductase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62101.1| short chain dehydrogenase/reductase family protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust. Identities = 239/241 (99%), Positives = 239/241 (99%) Query: 1 MSFIPDLLKGKTALVTGGTQGIGAAVARQLAALGARVIAAGLPPFAHEEFAGSAVTLVEM 60 MSFIPDLLKGKTALVTGGTQGIGAAVARQL ALGARVIAAGLPPFAHEEFAGS VTLVEM Sbjct: 1 MSFIPDLLKGKTALVTGGTQGIGAAVARQLVALGARVIAAGLPPFAHEEFAGSEVTLVEM 60 Query: 61 NVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAAREL 120 NVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAAREL Sbjct: 61 NVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAAREL 120 Query: 121 LRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 180 LRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA Sbjct: 121 LRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 180 Query: 181 TPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYLV 240 TPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYLV Sbjct: 181 TPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYLV 240 Query: 241 A 241 A Sbjct: 241 A 241 >ref|YP_550150.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] gb|ABE45252.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] Length = 239 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 177/241 (73%), Positives = 199/241 (82%), Gaps = 2/241 (0%) Query: 1 MSFIPDLLKGKTALVTGGTQGIGAAVARQLAALGARVIAAGLPPFAHEEFAGSAVTLVEM 60 M++ +L KGK ALV G TQGIGA +A LAALGA V A GL P + +AV + + Sbjct: 1 MTYQAELFKGKRALVAGATQGIGAVIANHLAALGAEVTALGLGP--GDGTLDAAVAVRQA 58 Query: 61 NVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAAREL 120 +V S +S+ AALAG+ QLDIV NCAGIIKRGAE + +VFEQV+AVNLTGTMRVC A RE Sbjct: 59 DVTSAQSLDAALAGMDQLDIVFNCAGIIKRGAEHDLDVFEQVLAVNLTGTMRVCTATRER 118 Query: 121 LRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 180 L+ SRGCIVNTASMLSFFGGGLVPGY+ASKGGVAQLTKSLAIAYAADGIRVNA+APGWIA Sbjct: 119 LKASRGCIVNTASMLSFFGGGLVPGYAASKGGVAQLTKSLAIAYAADGIRVNAIAPGWIA 178 Query: 181 TPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYLV 240 TPLTQALQDDP RAGPILARTPLGRWG P DV Q FLC+PAA+FMTG I+PVDGGYLV Sbjct: 179 TPLTQALQDDPARAGPILARTPLGRWGTPADVAQAAMFLCTPAAAFMTGVILPVDGGYLV 238 Query: 241 A 241 + Sbjct: 239 S 239 >ref|YP_004118460.1| short-chain dehydrogenase/reductase SDR [Pantoea sp. At-9b] gb|ADU71904.1| short-chain dehydrogenase/reductase SDR [Pantoea sp. At-9b] Length = 242 Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 165/241 (68%), Positives = 193/241 (80%) Query: 1 MSFIPDLLKGKTALVTGGTQGIGAAVARQLAALGARVIAAGLPPFAHEEFAGSAVTLVEM 60 M+F P L GKTALVTGGT GIGA + QLA LGA+VIAAG+ H+ + + + E+ Sbjct: 2 MTFHPALFAGKTALVTGGTSGIGAGIVNQLARLGAQVIAAGVGSDPHQFPVNTRIRVQEL 61 Query: 61 NVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAAREL 120 +V +++ A + L QLD++VNCAGII RGAE + +VFE+V+ +NLTGTMR C AARE Sbjct: 62 DVQDNQAIMALINTLPQLDLLVNCAGIISRGAEHDVDVFEKVLDINLTGTMRCCRAAREK 121 Query: 121 LRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 180 L QS+GCIVNTASMLSFFGGGLVPGYSASKGG+ QLTKSLAIA+A GIRVNAVAPGWIA Sbjct: 122 LAQSKGCIVNTASMLSFFGGGLVPGYSASKGGIMQLTKSLAIAWAEQGIRVNAVAPGWIA 181 Query: 181 TPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYLV 240 T LTQALQDDP RA PIL+RTPL RWGQP+DV Q V FLCSPAASF+TG I+PVDGGYL Sbjct: 182 TALTQALQDDPQRAQPILSRTPLKRWGQPDDVAQAVTFLCSPAASFITGIILPVDGGYLT 241 Query: 241 A 241 A Sbjct: 242 A 242 >ref|YP_003607396.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002] gb|ADG17885.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002] Length = 242 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 168/242 (69%), Positives = 190/242 (78%), Gaps = 1/242 (0%) Query: 1 MSFIPDLLKGKTALVTGGTQGIGAAVARQLAALGARVIAAGLP-PFAHEEFAGSAVTLVE 59 M+F LL+GKTALVTGG GIGAA+A LA LGA +AAGLP P E + V Sbjct: 1 MTFQNQLLEGKTALVTGGLSGIGAAIANALAQLGAHTVAAGLPLPEGAPETLDREIPRVA 60 Query: 60 MNVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAARE 119 ++V S ++V AA+ +LDIVVNCAG+I R E +VFE+V+ +NL GTMRVCAAAR+ Sbjct: 61 LDVRSGDAVSAAVNAFERLDIVVNCAGVISRVEEHRLDVFERVMDINLNGTMRVCAAARD 120 Query: 120 LLRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWI 179 LL+ S GCIVNTASMLSFFGGGLVP YSASKG VAQLTKSLAIAYAADGIRVNAVAPGWI Sbjct: 121 LLKASAGCIVNTASMLSFFGGGLVPAYSASKGAVAQLTKSLAIAYAADGIRVNAVAPGWI 180 Query: 180 ATPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYL 239 ATPLTQALQDD R+ IL RTPL RWG P++V QV FLC+PAASFMTGAIVPVDGGYL Sbjct: 181 ATPLTQALQDDDRRSQAILERTPLRRWGTPQEVAQVAVFLCTPAASFMTGAIVPVDGGYL 240 Query: 240 VA 241 VA Sbjct: 241 VA 242 >ref|ZP_03269581.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] gb|EDZ98834.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] Length = 242 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 164/242 (67%), Positives = 189/242 (78%), Gaps = 1/242 (0%) Query: 1 MSFIPDLLKGKTALVTGGTQGIGAAVARQLAALGARVIAAGLP-PFAHEEFAGSAVTLVE 59 M+F LL+GKTALVTGG GIGAA+A LA LGA +AAGLP P + + Sbjct: 1 MTFQNQLLEGKTALVTGGMSGIGAAIANALAQLGAHTVAAGLPLPEGAPDTLNREIARTA 60 Query: 60 MNVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAARE 119 ++V S ++V AA++ +LDIVVNCAG+I R E +VFE+V+ +NL GTMRVCAAAR Sbjct: 61 LDVRSGDAVTAAVSAFERLDIVVNCAGVISRVEEHRLDVFERVMDINLNGTMRVCAAARP 120 Query: 120 LLRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWI 179 LL+ S GCIVNTASMLSFFGGGLVP YSASKG VAQLTKSLA+AYAADG+RVNA+APGWI Sbjct: 121 LLKASAGCIVNTASMLSFFGGGLVPAYSASKGAVAQLTKSLALAYAADGVRVNAIAPGWI 180 Query: 180 ATPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYL 239 ATPLTQALQDD R+ IL RTPL RWG PE+V QV FLC+PAASFMTGAIVPVDGGYL Sbjct: 181 ATPLTQALQDDDARSQAILERTPLRRWGTPEEVAQVAVFLCTPAASFMTGAIVPVDGGYL 240 Query: 240 VA 241 VA Sbjct: 241 VA 242 >ref|YP_002497976.1| short-chain dehydrogenase/reductase SDR [Methylobacterium nodulans ORS 2060] gb|ACL57673.1| short-chain dehydrogenase/reductase SDR [Methylobacterium nodulans ORS 2060] Length = 241 Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 165/241 (68%), Positives = 192/241 (79%) Query: 1 MSFIPDLLKGKTALVTGGTQGIGAAVARQLAALGARVIAAGLPPFAHEEFAGSAVTLVEM 60 M+F P+LL+GKTA+VTGGT GIGA + L+ LGARV+A G+ A+ AG+ V E+ Sbjct: 1 MTFEPNLLRGKTAIVTGGTTGIGAGIVEALSGLGARVVAVGIGAAAYRAPAGADVVAREL 60 Query: 61 NVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAAREL 120 +V + V A + ++DIVVNCAGII+R E + +VFE+V+AVNLTGTMRVC AAR Sbjct: 61 DVTDDAGVAALVDSCERIDIVVNCAGIIRRVEEHQLDVFERVLAVNLTGTMRVCTAARSK 120 Query: 121 LRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIA 180 L S GCIVNTASMLSFFGG LVP YSASKGGVAQLTKSLA+AYA DGIRVNAVAPGWIA Sbjct: 121 LAASSGCIVNTASMLSFFGGSLVPAYSASKGGVAQLTKSLALAYAPDGIRVNAVAPGWIA 180 Query: 181 TPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYLV 240 TPLTQALQDDP R+ PIL+RTPLGRWG P DV Q V+FL SPAASFMTG I+PVDGGYL+ Sbjct: 181 TPLTQALQDDPARSQPILSRTPLGRWGTPHDVAQAVSFLVSPAASFMTGVILPVDGGYLI 240 Query: 241 A 241 A Sbjct: 241 A 241 >ref|YP_001328115.1| short-chain dehydrogenase/reductase SDR [Sinorhizobium medicae WSM419] gb|ABR61280.1| short-chain dehydrogenase/reductase SDR [Sinorhizobium medicae WSM419] Length = 263 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 144/241 (59%), Positives = 177/241 (73%), Gaps = 6/241 (2%) Query: 5 PDLLKGKTALVTGGTQGIGAAVARQLAALGARVIAAGLPPFAHEEFAGS-----AVTLVE 59 P L +G+ LV+GGT GIGAA+ AALGA V+A G+ A AGS V Sbjct: 23 PGLFEGRQVLVSGGTSGIGAAICEAFAALGADVLATGITE-AEIAAAGSRPGLQDVQFAT 81 Query: 60 MNVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAARE 119 ++V +V A +AGL +LD VVNCAG+I+R ELE +VF V+ +NL G+MRVCAAAR Sbjct: 82 LDVRDRSAVDALVAGLPRLDHVVNCAGVIRRNDELEPDVFADVVDINLNGSMRVCAAARP 141 Query: 120 LLRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWI 179 L ++ G IVNTASMLSFFGGGLVPGYSASKGG+AQLTKSLAIAYAAD IRVNA+APGWI Sbjct: 142 RLAETGGTIVNTASMLSFFGGGLVPGYSASKGGIAQLTKSLAIAYAADAIRVNAIAPGWI 201 Query: 180 ATPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYL 239 ATPLT+AL++ P R IL RTPL RWG+P +V V +L SP ASF+TG+++ +DGGYL Sbjct: 202 ATPLTKALRESPERNAAILGRTPLNRWGEPAEVAGGVLYLSSPLASFVTGSVLVIDGGYL 261 Query: 240 V 240 + Sbjct: 262 I 262 >ref|YP_675690.1| short-chain dehydrogenase/reductase SDR [Mesorhizobium sp. BNC1] gb|ABG64525.1| short-chain dehydrogenase/reductase SDR [Chelativorans sp. BNC1] Length = 259 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 145/244 (59%), Positives = 180/244 (73%), Gaps = 12/244 (4%) Query: 5 PDLLKGKTALVTGGTQGIGAAVARQLAALGARVIAAGLPPFAHEEFAGSAVTLVE----- 59 P L +G+ LV+GGT GIGAA+A AALGA V+A G A E G+A +V+ Sbjct: 19 PGLFEGRQVLVSGGTSGIGAAIAEAFAALGADVLATG----ATEAEVGAAENMVKCEGVR 74 Query: 60 ---MNVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAA 116 ++V +V A +AGL +LD VVNCAG+I+R EL+ +VF + +NL G+MR+CAA Sbjct: 75 FARLDVRDRAAVDALVAGLPRLDHVVNCAGVIRRNDELDPDVFADTVDINLNGSMRICAA 134 Query: 117 ARELLRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAP 176 AR L ++RG IVNTASMLSFFG G+ PGYS+SKGGVAQLTKSLAIAYAAD IRVNA+AP Sbjct: 135 ARPRLAETRGTIVNTASMLSFFGSGISPGYSSSKGGVAQLTKSLAIAYAADNIRVNAIAP 194 Query: 177 GWIATPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDG 236 GWIATPLT+AL+ DP R ILARTPLGRWG+P D+ V FL SP ASF+TGA++ +DG Sbjct: 195 GWIATPLTRALRQDPARETAILARTPLGRWGEPSDLAGGVLFLSSPLASFVTGAVLVIDG 254 Query: 237 GYLV 240 GYL+ Sbjct: 255 GYLI 258 >ref|YP_004618230.1| dehydrogenase-like protein [Ramlibacter tataouinensis TTB310] gb|AEG92211.1| dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein [Ramlibacter tataouinensis TTB310] Length = 250 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 124/183 (67%), Positives = 150/183 (81%) Query: 59 EMNVASEESVRAALAGLTQLDIVVNCAGIIKRGAELETEVFEQVIAVNLTGTMRVCAAAR 118 +++V E +V+A + L +LD++VNCAGII+RGAEL+ VF +V+ +NL GTMR CAAAR Sbjct: 68 QLDVRDEAAVKACVGALARLDVLVNCAGIIRRGAELDPAVFAEVLDINLNGTMRACAAAR 127 Query: 119 ELLRQSRGCIVNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGW 178 E L GCIVNTASMLSFFGG LVPGY+ASKGGVAQLTKSLAIAYAA+GIRVNAVAPGW Sbjct: 128 EKLAVDGGCIVNTASMLSFFGGALVPGYAASKGGVAQLTKSLAIAYAAEGIRVNAVAPGW 187 Query: 179 IATPLTQALQDDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGY 238 IAT LT ALQ+D R+ IL+RTPL RWG+PEDV FL SPAA+F+TG ++PVDGGY Sbjct: 188 IATRLTGALQEDAARSQAILSRTPLARWGRPEDVAGAALFLASPAAAFVTGVVLPVDGGY 247 Query: 239 LVA 241 L++ Sbjct: 248 LIS 250 >ref|ZP_01894275.1| short-chain dehydrogenase/reductase SDR [Marinobacter algicola DG893] gb|EDM47644.1| short-chain dehydrogenase/reductase SDR [Marinobacter algicola DG893] Length = 234 Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 132/232 (56%), Positives = 166/232 (71%), Gaps = 2/232 (0%) Query: 11 KTALVTGGTQGIGAAVARQLAALGARVIAAGLPPFAHEEFAG-SAVTLVEMNVASEESVR 69 K ALVTGGT+GIG+ V+R LA G RV+A G+ +F V +++V S+E V Sbjct: 2 KYALVTGGTRGIGSGVSRSLARAGYRVVATGVSDQEVNDFESLEGVVARKLDVTSQEQVD 61 Query: 70 AALAGLTQLDIVVNCAGIIKR-GAELETEVFEQVIAVNLTGTMRVCAAARELLRQSRGCI 128 A +A QLD +VNCAGII+R G E E + F Q + VNLTGT+R C A R L +S G I Sbjct: 62 AIIASFEQLDAIVNCAGIIQRDGREFEPDYFAQTLEVNLTGTLRTCHAGRAKLIESGGSI 121 Query: 129 VNTASMLSFFGGGLVPGYSASKGGVAQLTKSLAIAYAADGIRVNAVAPGWIATPLTQALQ 188 VNTASMLSFFG PGY+ASKGGVAQLTKSLA A+A +G+RVNAVAPGW+AT LT+ L Sbjct: 122 VNTASMLSFFGSASAPGYAASKGGVAQLTKSLAAAWAMEGVRVNAVAPGWVATELTRPLM 181 Query: 189 DDPVRAGPILARTPLGRWGQPEDVGQVVAFLCSPAASFMTGAIVPVDGGYLV 240 + R+ IL+RTP+GRWG+P+++G VV FL S A F+TGAI+PVDGGY + Sbjct: 182 ESDERSVAILSRTPMGRWGEPDEIGDVVLFLLSNQARFVTGAILPVDGGYSI 233