BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0059.p (581 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773967.1| anion ABC transporter permease [Herbaspirill... 1166 0.0 ref|ZP_02930062.1| NitT/TauT family ABC transporter, permease pr... 761 0.0 ref|ZP_01667139.1| binding-protein-dependent transport systems i... 550 e-154 ref|YP_001416175.1| binding-protein-dependent transport systems ... 512 e-143 ref|YP_474523.1| taurine ABC transporter permease protein [Synec... 508 e-141 gb|AEF26584.1| ABC transporter, permease protein [Bifidobacteriu... 505 e-141 ref|ZP_07029111.1| binding-protein-dependent transport systems i... 504 e-140 gb|ABE95107.1| Permease protein of ABC transporter system [Bifid... 504 e-140 ref|ZP_06595487.1| ABC transporter, permease protein, NitT/TauT ... 504 e-140 ref|YP_297234.1| binding-protein dependent transport system inne... 502 e-140 >ref|YP_003773967.1| anion ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ62059.1| ABC-type anion transport system, duplicated permease component protein [Herbaspirillum seropedicae SmR1] Length = 581 Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/581 (100%), Positives = 581/581 (100%) Query: 1 MKTTSPQLTAYEEVKPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPA 60 MKTTSPQLTAYEEVKPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPA Sbjct: 1 MKTTSPQLTAYEEVKPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPA 60 Query: 61 MIPYYAGRTLLRMWIAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSAT 120 MIPYYAGRTLLRMWIAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSAT Sbjct: 61 MIPYYAGRTLLRMWIAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSAT 120 Query: 121 VAGFMALFPGSLMGVECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQR 180 VAGFMALFPGSLMGVECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQR Sbjct: 121 VAGFMALFPGSLMGVECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQR 180 Query: 181 FRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHT 240 FRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHT Sbjct: 181 FRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHT 240 Query: 241 AALWAVIAMLALILVSDQLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLD 300 AALWAVIAMLALILVSDQLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLD Sbjct: 241 AALWAVIAMLALILVSDQLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLD 300 Query: 301 EKCWQPLGDWLARHRPGTSAAPTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDAL 360 EKCWQPLGDWLARHRPGTSAAPTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDAL Sbjct: 301 EKCWQPLGDWLARHRPGTSAAPTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDAL 360 Query: 361 HGAMSWSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGAS 420 HGAMSWSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGAS Sbjct: 361 HGAMSWSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGAS 420 Query: 421 FPVNMTFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYG 480 FPVNMTFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYG Sbjct: 421 FPVNMTFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYG 480 Query: 481 LSRWNLWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVT 540 LSRWNLWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVT Sbjct: 481 LSRWNLWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVT 540 Query: 541 KSGDTPLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD 581 KSGDTPLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD Sbjct: 541 KSGDTPLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD 581 >ref|ZP_02930062.1| NitT/TauT family ABC transporter, permease protein [Verrucomicrobium spinosum DSM 4136] Length = 582 Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/573 (67%), Positives = 454/573 (79%), Gaps = 10/573 (1%) Query: 15 KPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMW 74 + GFGW+D +V+ L GLLWS LHFG+GM VHFD + +D+S IPYYAGRTLLRMW Sbjct: 14 RQGFGWVDLVVMLALLGLLWSVLHFGRGMWVHFDEAKAPPLDTSVWNIPYYAGRTLLRMW 73 Query: 75 IAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMG 134 +AFA SL F GY AAK+R ARA+ILPALD+LQSVPVLGFLSATV GFMALFPGSL G Sbjct: 74 MAFACSLVFTFVVGYAAAKNRVARAVILPALDVLQSVPVLGFLSATVTGFMALFPGSLFG 133 Query: 135 VECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLI 194 VECA IFAIFTGQVWNM FGFY+S+VTIP DM+EAA+TY L WQRF TV+LPAS HSLI Sbjct: 134 VECACIFAIFTGQVWNMTFGFYNSLVTIPADMEEAASTYGLNRWQRFTTVQLPASMHSLI 193 Query: 195 WNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALIL 254 +NSMMSFGGGWFFVAQSEAISVMNK++KLPGLGSYMA A++ GD+ AALWAV AML +IL Sbjct: 194 FNSMMSFGGGWFFVAQSEAISVMNKNIKLPGLGSYMASAVETGDNRAALWAVAAMLLIIL 253 Query: 255 VSDQLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQPLGDWLARH 314 SDQLVWRPLLAWADK+++ELTES SPP SW+YDLLR +YVF W + + +PL DW+ RH Sbjct: 254 ASDQLVWRPLLAWADKYRMELTESGSPPRSWLYDLLRRAYVFEWFNHRL-EPLCDWI-RH 311 Query: 315 RPGTSAAPTPAR-ITRERWTKRVLTGLICGLLIF-----EALRGLVAAIDALHGAMSWSL 368 P+R +R V+ GL GL++ + GLVAA+ + +S + Sbjct: 312 LTFRLTTVEPSRPQSRVPMGSLVVRGL--GLVVLAWVGSKCATGLVAAVVNVRDHVSPAQ 369 Query: 369 FGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFP 428 G+I G T+LRVL MT +ATLIW PVGVWIG +P +ARFAQPLAQ+ ASFPVNMTFP Sbjct: 370 MGNIAMAGLFTLLRVLVMTTLATLIWVPVGVWIGLRPGVARFAQPLAQMAASFPVNMTFP 429 Query: 429 LVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWK 488 VVG++VA ++ M WGSI L+AMGTQWYILFNV+AGAMAIPNDLKEAAR YGL WNLW+ Sbjct: 430 FVVGFYVAWHIPMGWGSIFLMAMGTQWYILFNVVAGAMAIPNDLKEAARTYGLRGWNLWR 489 Query: 489 TLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLI 548 TLILPAIFP+WVTGACTAAGGAWNASIVAELA+WG LKA+GLGA ++ T GD P+I Sbjct: 490 TLILPAIFPYWVTGACTAAGGAWNASIVAELATWGPTQLKANGLGATLAEATHQGDKPVI 549 Query: 549 IASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD 581 I SI +MS+FVVLMN+ +WRRLY AERRFRLD Sbjct: 550 ICSIAMMSLFVVLMNRVLWRRLYRLAERRFRLD 582 >ref|ZP_01667139.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] gb|EAX47041.1| binding-protein-dependent transport systems inner membrane component [Thermosinus carboxydivorans Nor1] Length = 580 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 277/576 (48%), Positives = 385/576 (66%), Gaps = 20/576 (3%) Query: 18 FGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAF 77 FG ID LV+A +F LL+S L+ G GM++ F P +Q+E+ + PA +PYYAGR+LLRM+IA+ Sbjct: 13 FGLIDILVIAFVFALLFSVLYLGAGMVIPFSPENQIEISTDPADLPYYAGRSLLRMFIAY 72 Query: 78 AFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVEC 137 SL F G +AAKSR A +++P LDILQSVPVLGFLS T+ F+ LFP SL+GVE Sbjct: 73 GASLLFTFIYGSIAAKSRTAEKVLVPLLDILQSVPVLGFLSVTITMFIGLFPNSLLGVEL 132 Query: 138 AAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNS 197 A+IFAIFTGQ WNM F FYHS+ T+P D++EAA RL WQRF +E+P + SL+WNS Sbjct: 133 ASIFAIFTGQCWNMTFSFYHSLTTLPQDLKEAAAVLRLNWWQRFIKLEVPFAMISLVWNS 192 Query: 198 MMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSD 257 MMSFGG WFF+A SEAI+V+N+D++LPG+GS+MA A+++G+ +A +A++ M+ +I++ D Sbjct: 193 MMSFGGAWFFLAASEAITVLNQDIRLPGVGSFMAAAVEKGNMSAVGYAILTMIIMIMLVD 252 Query: 258 QLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQPLGDWL--ARHR 315 QL WRP++ W+ KFK+E TE+ TS VYD+L+ + W + + P+ + A +R Sbjct: 253 QLFWRPIVVWSQKFKMERTEAIEVSTSLVYDILKRAVFVAWAQKYFFGPITQLIDSAFNR 312 Query: 316 PGTSAAPTPARITR----------ERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMS 365 + A+I +W + T G ++ + L +M Sbjct: 313 CARVSGKVAAQIEHLTPLSYLTVAMKWALLLATIYYVGQQTYQGI--------LLIASMG 364 Query: 366 WSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNM 425 + I+ LGF T+ RV A ++I L PVGVWIG+ P +++F QP+ Q+ ASFP NM Sbjct: 365 FDKLVKIITLGFYTLGRVTAASLIGVLWTVPVGVWIGTNPRLSKFFQPIVQVTASFPANM 424 Query: 426 TFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWN 485 +P VV ++ ++ GSILL+ +GTQWYILFNVIAGAMAIP DLKEA+ ++ LS W Sbjct: 425 IYPFVVVLYLNYGINFELGSILLMMLGTQWYILFNVIAGAMAIPTDLKEASTVFKLSGWQ 484 Query: 486 LWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDT 545 W+ LILPAIFP +TG TA+GGAWNASIV+EL +W D L A GLG +I VT++GD Sbjct: 485 KWRKLILPAIFPHLITGCITASGGAWNASIVSELVTWKDQQLNATGLGNFIGQVTEAGDW 544 Query: 546 PLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD 581 I+ I VM FV+++N+ WRRLY AE ++ L+ Sbjct: 545 SGILGGIIVMCAFVIIINRLFWRRLYHLAETKYHLN 580 >ref|YP_001416175.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gb|ABS66518.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 582 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 280/566 (49%), Positives = 368/566 (65%), Gaps = 11/566 (1%) Query: 22 DALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAFAFSL 81 DAL +LFG L +H GK L D V PAM+P YA RT +RM A SL Sbjct: 22 DALAFGLLFGGLILMVHGGKETLAPLAALDLAPVSLDPAMLPEYALRTTMRMLAAIVASL 81 Query: 82 FFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVECAAIF 141 F G LAAKSRRA +++P LDILQSVPVLGFLS TV GFM+LFPG ++GVE AAIF Sbjct: 82 VFTFAYGALAAKSRRAEMVLVPMLDILQSVPVLGFLSFTVVGFMSLFPGRVLGVELAAIF 141 Query: 142 AIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNSMMSF 201 AIFT Q WNM F FY S+ T+P D+ EA ++RL+ WQRF +E+P S L+WN+MMS Sbjct: 142 AIFTSQAWNMTFSFYQSLKTVPRDLDEATRSFRLSGWQRFWRLEVPFSMPGLVWNTMMSM 201 Query: 202 GGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSDQLVW 261 GGWFFV SEAISV + + LPG+GSY+A AI + + A WAV+AMLA+IL+ DQL++ Sbjct: 202 SGGWFFVVASEAISVGDTTITLPGVGSYVALAIKEQNLAAVGWAVLAMLAVILLYDQLLF 261 Query: 262 RPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQPLGDWLA---RHRPGT 318 RPL+AWADKF++E + S + P SW+ R +Y+F ++ QPLG LA R R Sbjct: 262 RPLVAWADKFRVETSASGAAPRSWLLSAARRTYLF----QRVLQPLGAMLAAVPRQRLAF 317 Query: 319 SA--APTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMSWSLFGHIVWLG 376 SA + R+ W G+ L+ A L + + ++ + LG Sbjct: 318 SAPVSQDTRRVVESAWASPWAEGIWLALVFAVAGYALYVIVAFVGTELTLPEVTQVFGLG 377 Query: 377 FLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLVVGWFVA 436 LTM+RV+ + +ATLIW P+GVWIG +P A+ QPLAQ A+FP N+ FP V V Sbjct: 378 VLTMIRVIVLIALATLIWVPIGVWIGLRPRWAQRVQPLAQFLAAFPANIIFPFAVVAIVR 437 Query: 437 ANVSMN-WGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILPAI 495 + + W S L++ +GTQWYILFNV+AGA A PNDLKEAA + + WN W+ ++LP I Sbjct: 438 LGLDPDIWLSPLMV-LGTQWYILFNVVAGASAFPNDLKEAASTFRIRGWNWWRKVMLPGI 496 Query: 496 FPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIGVM 555 FP++VTGA TA+GG+WNASIVAE+ASWGD +L+A G+GAYI+ T +GD P I+ + VM Sbjct: 497 FPYYVTGAITASGGSWNASIVAEVASWGDTTLRAHGVGAYIADATAAGDYPRIVLGVAVM 556 Query: 556 SMFVVLMNKFVWRRLYAFAERRFRLD 581 S+FV+ N+ +WR ++ FA RR RLD Sbjct: 557 SIFVIFFNRLLWRPMFTFAGRRLRLD 582 >ref|YP_474523.1| taurine ABC transporter permease protein [Synechococcus sp. JA-3-3Ab] gb|ABC99260.1| NitT/TauT family ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 575 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 276/562 (49%), Positives = 362/562 (64%), Gaps = 40/562 (7%) Query: 38 HFGKGMLVHFDPSDQL-EVDSSPAMIPYYAGRTLLRMWIAFAFSLFFAIGTGYLAAKSRR 96 G G F P + +D P +PYYA R+ LRM+IA AFS F + GY+AAKSR Sbjct: 35 QVGAGTFERFQPPAVVPHIDLDPRNLPYYAARSTLRMFIALAFSTLFTLIYGYIAAKSRW 94 Query: 97 ARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVECAAIFAIFTGQVWNMAFGFY 156 A +++P LDILQSVPVLGFLS TV GF+ALFPGSL+G+E A+IFAIFT QVWNM F FY Sbjct: 95 AERILIPLLDILQSVPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFY 154 Query: 157 HSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISV 216 S+ T+P ++ EA T YRL+ WQRF +E+PA+ LIWN+MMSFGGGWFFVA SEAISV Sbjct: 155 QSLRTLPQELVEAVTLYRLSGWQRFVQLEVPAAMVGLIWNAMMSFGGGWFFVAASEAISV 214 Query: 217 MNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSDQLVWRPLLAWADKFKIELT 276 +N++ LPGLGSY+ A+ D WA++ M +IL+ DQL WRPL+AW+DKF++E + Sbjct: 215 LNQEYTLPGLGSYVEAAVQAEDLPKLGWALLTMAVVILLVDQLFWRPLVAWSDKFRLEQS 274 Query: 277 ESSSPPTSWVYDLLRGSYVFTWLDEKCWQPLGDWLARHRPGTSAAPTPARITRERW---- 332 ++ P SW+YDLL + + + +G+WLA R A + +TR RW Sbjct: 275 AGAAAPESWLYDLLTTA--------RIPRLIGNWLAPSR--ELADRLLSHLTRLRWGDPP 324 Query: 333 -------TKRVLTGL----ICGLLIFEALRGLVAAIDALHGAMSWSLFGHIVW---LGFL 378 +R+LT L I G+ I+ +V + G FG ++ LG L Sbjct: 325 NPEAERRRERLLTQLSWAAIAGIGIW-----IVYFVTTTVG------FGEVLLTFGLGIL 373 Query: 379 TMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLVVGWFVAAN 438 T+LRV + V AT+IWTP+GV IG P +A+ QP+ Q A+FP N FP +F+ Sbjct: 374 TLLRVSVLLVFATVIWTPIGVAIGFNPGLAKLLQPVVQFLAAFPANFLFPFATLFFIRTQ 433 Query: 439 VSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILPAIFPF 498 +S+ WGSILL+++G QWYILFN IAGA +IP DL+E A GL W W+ LI+P IF Sbjct: 434 ISIEWGSILLMSLGAQWYILFNSIAGAQSIPTDLREMAVDVGLRGWQRWQKLIIPGIFSA 493 Query: 499 WVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIGVMSMF 558 WVTG TA+GGAWNASIV+E+ +WG +LKA GLG YI+ T GD P I IG+MS+F Sbjct: 494 WVTGGITASGGAWNASIVSEIVAWGSTTLKATGLGTYIAEATAVGDWPRITLGIGMMSLF 553 Query: 559 VVLMNKFVWRRLYAFAERRFRL 580 VV +N+ WRRLY AE ++ L Sbjct: 554 VVGINRLFWRRLYQLAEEKYHL 575 >gb|AEF26584.1| ABC transporter, permease protein [Bifidobacterium breve ACS-071-V-Sch8b] Length = 596 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/568 (48%), Positives = 373/568 (65%), Gaps = 16/568 (2%) Query: 22 DALVLA---VLFGLL-WSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAF 77 DALV+A LFGL+ W G+ + PS V ++ A +PYYA R++ RM++A Sbjct: 37 DALVIAGILALFGLIAWILPAIGEPIGPKGVPSS---VSTNLADLPYYALRSVFRMFVAL 93 Query: 78 AFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVEC 137 FSL F G AA+ RR +++P LDILQSVP+LGFLSAT+ +M LFPGS++GVE Sbjct: 94 FFSLVFTFVYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLGVEA 153 Query: 138 AAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNS 197 A+IFAIFT Q WNMAF F S+ + P ++ EAA + RLT WQRF T+++P + L+WN Sbjct: 154 ASIFAIFTSQAWNMAFSFTRSLTSEPRELDEAARSLRLTRWQRFWTLDVPNAMIPLLWNC 213 Query: 198 MMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSD 257 MMS GGGWFF+ SE ISV N LPG+GS++AQA + + A WA++ M+A++L+ D Sbjct: 214 MMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAEENLAAICWAIVTMVAVVLLID 273 Query: 258 QLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQPLG---DWLARH 314 L+W+PL AWA+KF+I +ES+ TS V ++R S++ LD + +QP+G D L R Sbjct: 274 VLLWKPLTAWAEKFRITQSESAVRKTSAVLTIIRQSHIDEMLD-RLFQPVGELFDTLTRP 332 Query: 315 RPGTSAA-PTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMSWSLFGHIV 373 T P + TR RVL L +++ + G++ + +H + GH + Sbjct: 333 LGRTGGRWPVETKSTR----SRVLDVLFMVVVVTASAFGVIELMLVIHRDAGFDELGHAL 388 Query: 374 WLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLVVGW 433 LG LT LRV +T++ ++IW PVG IG P ++RF QP+ Q+ ASFP N TFP V W Sbjct: 389 ALGMLTFLRVALLTIVCSVIWVPVGALIGMNPRVSRFMQPIVQVLASFPSNFTFPFVTLW 448 Query: 434 FVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILP 493 FVA +V++NWGSILL+A+GTQWYILFNVIAGA IP+DL+E R + L RW W+ LILP Sbjct: 449 FVACSVNINWGSILLMALGTQWYILFNVIAGASQIPDDLREMTRSFQLGRWQRWRELILP 508 Query: 494 AIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIG 553 A+F WVTG TAAGGAWNASIV+E+ S+G +L A GLGAYI+ T++GDT I + Sbjct: 509 AVFGSWVTGGITAAGGAWNASIVSEIVSYGQHTLTASGLGAYIAEATENGDTVRTIIGVA 568 Query: 554 VMSMFVVLMNKFVWRRLYAFAERRFRLD 581 VMS+FVV +N+ W L AERRF L+ Sbjct: 569 VMSVFVVAVNRLFWNPLQRLAERRFALN 596 >ref|ZP_07029111.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] gb|EFI58205.1| binding-protein-dependent transport systems inner membrane component [Acidobacterium sp. MP5ACTX8] Length = 590 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 278/576 (48%), Positives = 362/576 (62%), Gaps = 8/576 (1%) Query: 8 LTAYEEVKPGFGWIDALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDS-SPAMIPYYA 66 L E +P F D V LL+ A G LV F P D + S P +P YA Sbjct: 21 LRTESESQPSFAAADIAVGLGTLVLLYVAARVGAESLVKFSPPDVIPTISLDPRNLPNYA 80 Query: 67 GRTLLRMWIAFAFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMA 126 R+ LRM+IA FS F GY AA+SRRA +++P LDILQSVPVLGFLS TV F+A Sbjct: 81 ARSTLRMFIALGFSTLFTFVYGYAAARSRRAEKVLIPLLDILQSVPVLGFLSVTVTLFIA 140 Query: 127 LFPGSLMGVECAAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVEL 186 +F GSL+G+E A+IFAIFTGQ WNMAF FY S+ T+P +M E T Y L+ W+RF +EL Sbjct: 141 MFRGSLLGLEAASIFAIFTGQAWNMAFSFYQSLRTVPAEMDEMVTLYGLSKWERFTRLEL 200 Query: 187 PASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAV 246 P+S L+WN MMSFGGGWFF+A SE+ISV+N+ LPGLGSY+A AI D A WAV Sbjct: 201 PSSVIGLVWNGMMSFGGGWFFLAASESISVLNRQYTLPGLGSYVASAIAARDLHAVAWAV 260 Query: 247 IAMLALILVSDQLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQP 306 + M+ L+L+ DQ W+PL+ AD++K+EL+ + WV DL R + + L E P Sbjct: 261 VTMIILVLLIDQFFWKPLVTIADRYKLELS-AGEERRFWVVDLWRAASL-PALFECILGP 318 Query: 307 LGDWLARHRPG-TSAAPTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMS 365 L R T P P + + RV ++ L AL +VAA+ + ++ Sbjct: 319 SLIRLDRLFSNLTRVKPHPGHTSPSKTADRVFNVVVSLL----ALGMIVAAVRFILSSVG 374 Query: 366 WSLFGHIVWLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNM 425 + GH LG T RVLA+ V++TLIWTP+GV IG P +AR +QPL QI ASFP N Sbjct: 375 MAEVGHAALLGLATGARVLALLVLSTLIWTPIGVAIGFNPRLARLSQPLVQICASFPANF 434 Query: 426 TFPLVVGWFVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWN 485 FP F+ + +NWGS+LL+A+G QWY+LFNVI GA ++PNDL+E A GL + Sbjct: 435 LFPFATLIFIRLGIHLNWGSMLLMALGAQWYLLFNVIGGAQSVPNDLREMATSIGLRGFR 494 Query: 486 LWKTLILPAIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDT 545 WK LI P+IF WVTGA TA+GGAWNASIVAE+ SWG +L+A GLGAYI+ T GD Sbjct: 495 KWKFLIGPSIFGSWVTGAITASGGAWNASIVAEIVSWGHTTLRAAGLGAYIADATSVGDW 554 Query: 546 PLIIASIGVMSMFVVLMNKFVWRRLYAFAERRFRLD 581 P I+ + +MS+FVV +N+ +W+ LY A+ RF+L Sbjct: 555 PRIVLGVSLMSVFVVTLNRILWKPLYRLAQTRFQLS 590 >gb|ABE95107.1| Permease protein of ABC transporter system [Bifidobacterium breve UCC2003] Length = 596 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 275/568 (48%), Positives = 373/568 (65%), Gaps = 16/568 (2%) Query: 22 DALVLA---VLFGLL-WSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAF 77 DALV+A LFGL+ W G+ + PS V ++ A +PYYA R++ RM++A Sbjct: 37 DALVIAGILALFGLIAWILPAIGEPIGPKGVPSS---VSTNLADLPYYALRSVFRMFVAL 93 Query: 78 AFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVEC 137 FSL F G AA+ RR +++P LDILQSVP+LGFLSAT+ +M LFPGS++GVE Sbjct: 94 FFSLVFTFVYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLGVEA 153 Query: 138 AAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNS 197 A+IFAIFT Q WNMAF F S+ + P ++ EAA + RLT WQRF T+++P + L+WN Sbjct: 154 ASIFAIFTSQAWNMAFSFTRSLTSEPRELDEAARSLRLTRWQRFWTLDVPNAMIPLLWNC 213 Query: 198 MMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSD 257 MMS GGGWFF+ SE ISV N LPG+GS++AQA + + A WA++ M+A++L+ D Sbjct: 214 MMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAEENLAAICWAIVTMVAVVLLID 273 Query: 258 QLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQPLG---DWLARH 314 L+W+PL AWA+KF+I +ES+ TS V ++R S++ LD + +QP+G D L R Sbjct: 274 VLLWKPLTAWAEKFRITQSESAVRKTSAVLTIIRQSHIDEMLD-RLFQPVGELFDTLTRP 332 Query: 315 RPGTSAA-PTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMSWSLFGHIV 373 T P + TR RVL L +++ + G++ + +H + GH + Sbjct: 333 LGRTGGRWPVETKSTR----SRVLDVLFMVVVVTASAFGVIELMLVIHRDAGFDELGHAL 388 Query: 374 WLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLVVGW 433 LG LT LRV +T++ ++IW PVG IG P ++RF QP+ Q+ ASFP N TFP V W Sbjct: 389 ALGMLTFLRVALLTIVCSVIWVPVGALIGMNPRVSRFMQPIVQVLASFPSNFTFPFVTLW 448 Query: 434 FVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILP 493 FVA +V++NWGSILL+A+GTQWYILFNVIAGA IP+DL+E A + L RW W+ LILP Sbjct: 449 FVACSVNINWGSILLMALGTQWYILFNVIAGASQIPDDLREMAHSFQLGRWQRWRELILP 508 Query: 494 AIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIG 553 A+F WVTG TAAGGAWNASIV+E+ S+G +L A GLGAYI+ T++GDT I + Sbjct: 509 AVFGSWVTGGITAAGGAWNASIVSEIVSYGQHTLTASGLGAYIAEATENGDTVRTIIGVA 568 Query: 554 VMSMFVVLMNKFVWRRLYAFAERRFRLD 581 VMS+FVV +N+ W L AERRF L+ Sbjct: 569 VMSVFVVAVNRLFWNPLQRLAERRFALN 596 >ref|ZP_06595487.1| ABC transporter, permease protein, NitT/TauT family [Bifidobacterium breve DSM 20213] gb|EFE90024.1| ABC transporter, permease protein, NitT/TauT family [Bifidobacterium breve DSM 20213] Length = 596 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 275/568 (48%), Positives = 373/568 (65%), Gaps = 16/568 (2%) Query: 22 DALVLA---VLFGLL-WSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAF 77 DALV+A LFGL+ W G+ + PS V ++ A +PYYA R++ RM++A Sbjct: 37 DALVIAGILALFGLIAWILPAIGEPIGPKGVPSS---VSTNLADLPYYALRSVFRMFVAL 93 Query: 78 AFSLFFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVEC 137 FSL F G AA+ RR +++P LDILQSVP+LGFLSAT+ +M LFPGS++GVE Sbjct: 94 FFSLVFTFVYGTAAARCRRLSRVLIPLLDILQSVPILGFLSATITIWMVLFPGSMLGVEA 153 Query: 138 AAIFAIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNS 197 A+IFAIFT Q WNMAF F S+ + P ++ EAA + RLT WQRF T+++P + L+WN Sbjct: 154 ASIFAIFTSQAWNMAFSFTRSLTSEPRELDEAARSLRLTRWQRFWTLDVPNAMIPLLWNC 213 Query: 198 MMSFGGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSD 257 MMS GGGWFF+ SE ISV N LPG+GS++AQA + + A WA++ M+A++L+ D Sbjct: 214 MMSVGGGWFFLTASEMISVNNHTYALPGIGSFVAQAAAEENLAAICWAIVTMVAVVLLID 273 Query: 258 QLVWRPLLAWADKFKIELTESSSPPTSWVYDLLRGSYVFTWLDEKCWQPLG---DWLARH 314 L+W+PL AWA+KF+I +ES+ TS V ++R S++ LD + +QP+G D L R Sbjct: 274 VLLWKPLTAWAEKFRITQSESAVRKTSAVLTIIRQSHIDEMLD-RLFQPVGELFDTLTRP 332 Query: 315 RPGTSAA-PTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMSWSLFGHIV 373 T P + TR RVL L +++ + G++ + +H + GH + Sbjct: 333 LGRTGGRWPVETKSTR----SRVLDVLFMVVVVTASAFGVIELMLVIHRDAGFDELGHAL 388 Query: 374 WLGFLTMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLVVGW 433 LG LT LRV +T++ ++IW PVG IG P ++RF QP+ Q+ ASFP N TFP V W Sbjct: 389 ALGMLTFLRVALLTIVCSVIWVPVGALIGMNPRVSRFMQPIVQVLASFPSNFTFPFVTLW 448 Query: 434 FVAANVSMNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILP 493 FVA +V++NWGSILL+A+GTQWYILFNVIAGA IP+DL+E A + L RW W+ LILP Sbjct: 449 FVACSVNINWGSILLMALGTQWYILFNVIAGASQIPDDLREMAHSFQLGRWQRWRELILP 508 Query: 494 AIFPFWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIG 553 A+F WVTG TAAGGAWNASIV+E+ S+G +L A GLGAYI+ T++GDT I + Sbjct: 509 AVFGSWVTGGITAAGGAWNASIVSEIVSYGQHTLTASGLGAYIAEATENGDTVRTIIGVA 568 Query: 554 VMSMFVVLMNKFVWRRLYAFAERRFRLD 581 VMS+FVV +N+ W L AERRF L+ Sbjct: 569 VMSVFVVAVNRLFWNPLQRLAERRFALN 596 >ref|YP_297234.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gb|AAZ62390.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 584 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 274/563 (48%), Positives = 360/563 (63%), Gaps = 12/563 (2%) Query: 22 DALVLAVLFGLLWSALHFGKGMLVHFDPSDQLEVDSSPAMIPYYAGRTLLRMWIAFAFSL 81 D +L ++ ++ + M V F P + + V A +PYY RT +RM A A SL Sbjct: 30 DFALLPIILAIIVMVAFAAQQMNVPFVPGEPMTVHLDIAYLPYYLMRTSIRMLAALAASL 89 Query: 82 FFAIGTGYLAAKSRRARALILPALDILQSVPVLGFLSATVAGFMALFPGSLMGVECAAIF 141 F++ LA+K+R A +++PALDILQS+PVLGFLS TV GF+ALFPG+L+GVECAAIF Sbjct: 90 VFSLAFAALASKNRTAEKVLVPALDILQSIPVLGFLSITVTGFIALFPGNLIGVECAAIF 149 Query: 142 AIFTGQVWNMAFGFYHSMVTIPTDMQEAATTYRLTAWQRFRTVELPASAHSLIWNSMMSF 201 AIFT Q WNMAF Y S TIP D+ EAA +RL+ WQRF +E+P + L+WN MMS Sbjct: 150 AIFTSQAWNMAFSLYQSFRTIPGDLIEAAAMFRLSPWQRFWRLEVPFAMPGLLWNMMMSM 209 Query: 202 GGGWFFVAQSEAISVMNKDLKLPGLGSYMAQAIDQGDHTAALWAVIAMLALILVSDQLVW 261 GGWFFV SEAISV +D++LPG+GSY+A AI Q + A WA++AML ILV DQL++ Sbjct: 210 SGGWFFVVASEAISVSGQDIRLPGIGSYIALAIQQQNLAAIGWAILAMLVGILVYDQLLF 269 Query: 262 RPLLAWADKFKIELTESSSPPTSWVYDLLRGS---YVFTWLDEKCWQPLGDWLARHRPGT 318 RPL+AWAD+F+ E + P SW+ DLLR S + W AR + Sbjct: 270 RPLVAWADRFRFETLSQDNEPESWLLDLLRRSEWVRALLARTAALAERTLAWGARRQAPA 329 Query: 319 SAAPTPARITRERWTKRVLTGLICGLLIFEALRGLVAAIDALHGAMSWSLFGHIVWLGFL 378 +A P P R+ +W +R +I + AL L + +H + W GH++WLG L Sbjct: 330 TAEPDPRRV---QWRERAGNAVI----LLVALAALSRVMYFVHSEVGWLEVGHVLWLGTL 382 Query: 379 TMLRVLAMTVIATLIWTPVGVWIGSKPHIARFAQPLAQIGASFPVNMTFPLVVGWFVAAN 438 TM+RV+ + +A +IW P+G+ IG P +AR AQP+AQ A+FP N+ FPLVV V Sbjct: 383 TMVRVIVLIALAAVIWVPIGIRIGLNPSVARIAQPVAQFLAAFPANLMFPLVVMLIVRFG 442 Query: 439 VSMN-WGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARMYGLSRWNLWKTLILPAIFP 497 ++ W S LLI GTQWYILFNV+AGA IP +LK AAR +GL W LWK ++PA+FP Sbjct: 443 LNPEIWLSPLLI-FGTQWYILFNVVAGASGIPTELKLAARNFGLRGWLLWKRFLIPAVFP 501 Query: 498 FWVTGACTAAGGAWNASIVAELASWGDVSLKADGLGAYISAVTKSGDTPLIIASIGVMSM 557 +TG TAAGG+WNASIVAE +WGD +L A GLG+YI+ T GD P I IGVM++ Sbjct: 502 SLLTGLVTAAGGSWNASIVAEYVTWGDRTLVATGLGSYIAETTARGDFPRIALGIGVMAL 561 Query: 558 FVVLMNKFVWRRLYAFAERRFRL 580 FVV N+ +W RLY A+ R RL Sbjct: 562 FVVGFNRLLWNRLYQLAQERTRL 584