BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0029.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773940.1| transmembrane protein [Herbaspirillum serope... 408 e-112 ref|YP_004751152.1| hypothetical protein CFU_0492 [Collimonas fu... 285 3e-75 ref|YP_004715026.1| hypothetical protein PSTAB_2656 [Pseudomonas... 270 1e-70 ref|YP_001173165.1| hypothetical protein PST_2673 [Pseudomonas s... 240 1e-61 ref|YP_001583309.1| hypothetical protein Bmul_3333 [Burkholderia... 239 3e-61 ref|ZP_03573846.1| inner membrane protein YicG [Burkholderia mul... 238 3e-61 ref|ZP_03583257.1| inner membrane protein YicG [Burkholderia mul... 238 3e-61 ref|ZP_05133358.1| bicyclomycin/multidrug efflux system [Stenotr... 234 6e-60 gb|EGD03578.1| hypothetical protein B1M_15775 [Burkholderia sp. ... 234 8e-60 ref|YP_002235232.1| hypothetical protein BCAM2631 [Burkholderia ... 233 1e-59 >ref|YP_003773940.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62032.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 208 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 207/208 (99%), Positives = 208/208 (100%) Query: 1 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGT+RDILIGHYPLGWVA Sbjct: 1 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTMRDILIGHYPLGWVA 60 Query: 61 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV 120 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV Sbjct: 61 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV 120 Query: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL Sbjct: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 Query: 181 LGFAVRLLAIRFHWELPRMDKDRVRGFD 208 LGFAVRLLAIRFHWELPRMDKDRVRGFD Sbjct: 181 LGFAVRLLAIRFHWELPRMDKDRVRGFD 208 >ref|YP_004751152.1| hypothetical protein CFU_0492 [Collimonas fungivorans Ter331] gb|AEK60329.1| hypothetical protein CFU_0492 [Collimonas fungivorans Ter331] Length = 207 Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 138/208 (66%), Positives = 173/208 (83%), Gaps = 1/208 (0%) Query: 1 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLLHTIYLIAI AEA+SGA+MG+R+DMD+FG+C++GT+ ALGGG++RDIL+G+YPLGW+A Sbjct: 1 MLLHTIYLIAIVAEAMSGAIMGMRRDMDLFGICVVGTITALGGGSMRDILLGNYPLGWIA 60 Query: 61 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV 120 HPEYL FTI AAVV A+ AR LHH +S FLVVD LGLVAF+VIGCD+AR A P IV+ Sbjct: 61 HPEYLLFTIGAAVVTALVARFLHHLRSVFLVVDGLGLVAFSVIGCDVARA-AGMAPGIVI 119 Query: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 + GM+TGVFGGLLRDVLCNEIPLVL+RE+YA+++L TGA YVG+L VD A + ++ Sbjct: 120 LAGMITGVFGGLLRDVLCNEIPLVLQRELYATIALFTGALYVGLLWWDVDSSAAPLIAIG 179 Query: 181 LGFAVRLLAIRFHWELPRMDKDRVRGFD 208 GF VRLLA+RFHW+LP + +RGF+ Sbjct: 180 AGFLVRLLALRFHWKLPSFNGSGIRGFE 207 >ref|YP_004715026.1| hypothetical protein PSTAB_2656 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] gb|AEA84674.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] gb|AEJ05937.1| hypothetical protein PSTAB_2656 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] Length = 208 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 126/207 (60%), Positives = 168/207 (81%), Gaps = 1/207 (0%) Query: 2 LLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAH 61 LLHTIYLIAI AEA+SGA+MG+R+ MD+FG+CL+GTV ALGGGT RD+L+GHYP+GW+AH Sbjct: 3 LLHTIYLIAITAEAMSGAIMGMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAH 62 Query: 62 PEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVM 121 PEYL FTI AA+V AR LHH + FL+VD LGLVAFTVIGCD+A G HP+IVV+ Sbjct: 63 PEYLTFTIGAAIVTGFIARHLHHLRMVFLLVDGLGLVAFTVIGCDVAMGMGA-HPSIVVL 121 Query: 122 LGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLL 181 G++TG+FGGL+RDVLCN++P+VL+RE+YA+V+L TG YVG+L L+++ +AT+++L Sbjct: 122 AGVITGIFGGLMRDVLCNQVPMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGS 181 Query: 182 GFAVRLLAIRFHWELPRMDKDRVRGFD 208 GF R+LA+ F W+LP + +RG + Sbjct: 182 GFLFRVLAMTFSWKLPDFNGKDIRGLE 208 >ref|YP_001173165.1| hypothetical protein PST_2673 [Pseudomonas stutzeri A1501] gb|ABP80323.1| membrane protein, putative [Pseudomonas stutzeri A1501] Length = 187 Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 110/188 (58%), Positives = 150/188 (79%), Gaps = 1/188 (0%) Query: 21 MGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHPEYLAFTICAAVVAAVAAR 80 MG+R+ MD+FG+CL+GTV ALGGGT RD+L+GHYP+GW+AHPEYL FTI AA+V AR Sbjct: 1 MGMRRGMDLFGICLLGTVTALGGGTARDVLLGHYPVGWIAHPEYLTFTIGAAIVTGFIAR 60 Query: 81 ALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVMLGMVTGVFGGLLRDVLCNE 140 LHH + FL+VD LGLVAFTVIGCD+A G HP+IVV+ G++TG+FGGL+RDVLCN+ Sbjct: 61 HLHHLRMVFLLVDGLGLVAFTVIGCDVAMGMGA-HPSIVVLAGVITGIFGGLMRDVLCNQ 119 Query: 141 IPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLGFAVRLLAIRFHWELPRMD 200 +P+VL+RE+YA+V+L TG YVG+L L+++ +AT+++L GF R+LA+ F W+LP + Sbjct: 120 VPMVLQRELYATVALFTGVFYVGMLWLEINTTLATLAALGSGFLFRVLAMTFSWKLPDFN 179 Query: 201 KDRVRGFD 208 +RG + Sbjct: 180 GKDIRGLE 187 >ref|YP_001583309.1| hypothetical protein Bmul_3333 [Burkholderia multivorans ATCC 17616] ref|YP_001949567.1| hypothetical protein BMULJ_05193 [Burkholderia multivorans ATCC 17616] gb|ABX17017.1| protein of unknown function UPF0126 [Burkholderia multivorans ATCC 17616] dbj|BAG47031.1| putative membrane protein [Burkholderia multivorans ATCC 17616] Length = 203 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 +YL T+ AA VA+ AR + K+ F+ VDALGL AFT+IGCD+ P IVV+ Sbjct: 61 QYLVITLVAATVASRIARHVARMKTLFVTVDALGLAAFTIIGCDVGAS-TGAAPIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LRRE+YASV+ TGA YV + H+ +D R+AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILRRELYASVAFFTGALYVALQHVGIDARVATVVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 FA+R+LA+RF WE+ Sbjct: 180 FAMRMLAVRFGWEM 193 >ref|ZP_03573846.1| inner membrane protein YicG [Burkholderia multivorans CGD2M] ref|ZP_03580012.1| inner membrane protein YicG [Burkholderia multivorans CGD2] gb|EEE05511.1| inner membrane protein YicG [Burkholderia multivorans CGD2] gb|EEE11783.1| inner membrane protein YicG [Burkholderia multivorans CGD2M] Length = 203 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 +YL T+ AA VA+ AR + K+ F+ VDALGL AFT+IGCD+ P IVV+ Sbjct: 61 QYLVITLVAATVASRLARHVARMKTLFVAVDALGLAAFTIIGCDVGAS-TGAAPIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LRRE+YASV+ TGA YV + H+ +D R+AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILRRELYASVAFFTGALYVALQHVGIDARVATIVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 FA+R+LA+RF WE+ Sbjct: 180 FAMRMLAVRFGWEM 193 >ref|ZP_03583257.1| inner membrane protein YicG [Burkholderia multivorans CGD1] gb|EEE01700.1| inner membrane protein YicG [Burkholderia multivorans CGD1] Length = 203 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 +YL T+ AA VA+ AR + K+ F+ VDALGL AFT+IGCD+ P IVV+ Sbjct: 61 QYLVITLVAATVASRIARHVARMKTLFVTVDALGLAAFTIIGCDVGAS-TGAAPIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LRRE+YASV+ TGA YV + H+ +D R+AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILRRELYASVAFFTGALYVALQHVGIDARVATVVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 FA+R+LA+RF WE+ Sbjct: 180 FAMRMLAVRFGWEM 193 >ref|ZP_05133358.1| bicyclomycin/multidrug efflux system [Stenotrophomonas sp. SKA14] gb|EED37419.1| bicyclomycin/multidrug efflux system [Stenotrophomonas sp. SKA14] Length = 205 Score = 234 bits (597), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 117/198 (59%), Positives = 151/198 (76%), Gaps = 1/198 (0%) Query: 1 MLLHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVA 60 MLL IYLIAI AEA++GAL R+ MD+FGV +I V ALGGG++RDIL+GHYPLGWV Sbjct: 1 MLLSIIYLIAISAEAMTGALSAGRRRMDLFGVVMIACVTALGGGSLRDILLGHYPLGWVK 60 Query: 61 HPEYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVV 120 HPEYL FT+CAA++A AR +HHF+ FLV+D LGL+AFT+IGC IAR P IV+ Sbjct: 61 HPEYLGFTVCAALIATWVARWMHHFRRTFLVLDGLGLIAFTLIGCSIAREAGHATP-IVL 119 Query: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 + GM+TG FGG+LRD+LCNE+PL+ ++E+YA +SLLTGA Y+ +LH V A + L Sbjct: 120 IAGMLTGAFGGVLRDILCNEVPLIFQKELYAIISLLTGAVYLLLLHWGVADATAILCCLG 179 Query: 181 LGFAVRLLAIRFHWELPR 198 GFA+RLLAI + WE+P+ Sbjct: 180 GGFALRLLAIHYRWEMPK 197 >gb|EGD03578.1| hypothetical protein B1M_15775 [Burkholderia sp. TJI49] Length = 203 Score = 234 bits (596), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 118/196 (60%), Positives = 153/196 (78%), Gaps = 5/196 (2%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDI--ARGFADFHPAIVV 120 EYL T+ AA VA+ AAR + K+ F+ VDA+GL AFT+IGCDI + G A IVV Sbjct: 61 EYLVITLVAATVASWAARHVARMKTLFVTVDAIGLAAFTIIGCDIGASTGAASI---IVV 117 Query: 121 MLGMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLL 180 + G +TGV GG+LRD+LCNE+PL+LR E+YASV+ +TGA YVG+ L VD AT+ +L Sbjct: 118 LAGAITGVCGGMLRDLLCNEMPLILREELYASVAFVTGALYVGMQQLGVDAGFATVCALA 177 Query: 181 LGFAVRLLAIRFHWEL 196 GFA+R+LA+RF W++ Sbjct: 178 AGFAMRMLAVRFGWKM 193 >ref|YP_002235232.1| hypothetical protein BCAM2631 [Burkholderia cenocepacia J2315] emb|CAR56495.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 203 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 113/194 (58%), Positives = 151/194 (77%), Gaps = 1/194 (0%) Query: 3 LHTIYLIAICAEAISGALMGIRKDMDIFGVCLIGTVAALGGGTVRDILIGHYPLGWVAHP 62 +HT+YLIAI AEA+SGALMG+R+ MD FG+ L+G V ALGGGTVRD+L+GHYPLGW+AHP Sbjct: 1 MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHP 60 Query: 63 EYLAFTICAAVVAAVAARALHHFKSAFLVVDALGLVAFTVIGCDIARGFADFHPAIVVML 122 EYL T+ AA VA+ AAR + K+ F+ VDA+GL AFT+IGCD+ P IVV+ Sbjct: 61 EYLVITLVAATVASWAARHVARMKTLFVTVDAIGLAAFTIIGCDVGASTGT-APIIVVLA 119 Query: 123 GMVTGVFGGLLRDVLCNEIPLVLRREIYASVSLLTGATYVGVLHLQVDPRIATMSSLLLG 182 G +TGV GG+LRD+LCNE+PL+LR E+YASV+ +TG+ YVG+ HL +D AT+ +L G Sbjct: 120 GAITGVCGGMLRDLLCNEMPLILREELYASVAFVTGSLYVGMQHLGIDTGFATLVALAAG 179 Query: 183 FAVRLLAIRFHWEL 196 F++R+LA+R W++ Sbjct: 180 FSMRMLAVRLGWKM 193