BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0028.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773939.1| TRAP-type C4-dicarboxylate transport system ... 707 0.0 ref|YP_003774533.1| TRAP-type C4-dicarboxylate transport system ... 634 e-180 ref|NP_768810.1| ABC transporter substrate-binding protein [Brad... 480 e-133 ref|YP_001889841.1| TRAP dicarboxylate transporter DctP subunit ... 471 e-130 ref|YP_001239281.1| putative TRAP-type C4-dicarboxylate transpor... 460 e-127 ref|YP_001206706.1| putative TRAP-type C4-dicarboxylate transpor... 457 e-127 ref|YP_003450538.1| TRAP dicarboxylate transporter [Azospirillum... 452 e-125 ref|YP_001416442.1| TRAP dicarboxylate transporter subunit DctP ... 448 e-124 ref|YP_002499559.1| TRAP dicarboxylate transporter subunit DctP ... 446 e-123 ref|YP_001769614.1| TRAP dicarboxylate transporter subunit DctP ... 442 e-122 >ref|YP_003773939.1| TRAP-type C4-dicarboxylate transport system periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62031.1| TRAP-type C4-dicarboxylate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 345 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/345 (99%), Positives = 345/345 (100%) Query: 1 MNDERAKKQVTRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQE 60 MNDERAKKQVTRRN+LKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQE Sbjct: 1 MNDERAKKQVTRRNMLKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQE 60 Query: 61 AIDRIRNATNGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNT 120 AIDRIRNATNGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNT Sbjct: 61 AIDRIRNATNGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNT 120 Query: 121 GFAFHDYGAVWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKG 180 GFAFHDYGAVWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKG Sbjct: 121 GFAFHDYGAVWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKG 180 Query: 181 LKLRVPAAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKF 240 LKLRVPAAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKF Sbjct: 181 LKLRVPAAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKF 240 Query: 241 CTISNHVWDAYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASK 300 CTISNHVWDAYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASK Sbjct: 241 CTISNHVWDAYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASK 300 Query: 301 GLQIVEADKDSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 GLQIVEADKDSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG Sbjct: 301 GLQIVEADKDSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 >ref|YP_003774533.1| TRAP-type C4-dicarboxylate transport system periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62625.1| TRAP-type C4-dicarboxylate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 348 Score = 634 bits (1634), Expect = e-180, Method: Compositional matrix adjust. Identities = 301/344 (87%), Positives = 326/344 (94%) Query: 2 NDERAKKQVTRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEA 61 N + K V+RR +LKAGAVGAALPLFSI+SRPA+AAEF+YKFATGQDPSHPVNKRAQ+A Sbjct: 5 NSKPGKTSVSRRQLLKAGAVGAALPLFSIMSRPANAAEFNYKFATGQDPSHPVNKRAQQA 64 Query: 62 IDRIRNATNGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTG 121 IDRIR AT GRL+IKLFPANQLGSDTDLMSQ+RNGGVEFFNQA+ VLSTLVPAAGIVNTG Sbjct: 65 IDRIREATGGRLDIKLFPANQLGSDTDLMSQIRNGGVEFFNQASVVLSTLVPAAGIVNTG 124 Query: 122 FAFHDYGAVWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGL 181 FAFHDY VW+AMDGPLGA+VRAQIEKVGLLTMSKPWDNGFRQITTSTKP++ A D+KGL Sbjct: 125 FAFHDYKEVWQAMDGPLGAYVRAQIEKVGLLTMSKPWDNGFRQITTSTKPIKTAADLKGL 184 Query: 182 KLRVPAAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFC 241 KLRVPAAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFC Sbjct: 185 KLRVPAAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFC 244 Query: 242 TISNHVWDAYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKG 301 TISNHVWDAYWILGNRRAFEKLPKDIQEIVRRELDKAA+DERADIA+ SGFARNDL KG Sbjct: 245 TISNHVWDAYWILGNRRAFEKLPKDIQEIVRRELDKAATDERADIASLSGFARNDLQGKG 304 Query: 302 LQIVEADKDSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 +QI+EADK+SFKEALAR +FYKD+RAKFG+DAWKLL+ SVG+LG Sbjct: 305 VQIIEADKNSFKEALARGSFYKDLRAKFGDDAWKLLQNSVGSLG 348 >ref|NP_768810.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47435.1| blr2170 [Bradyrhizobium japonicum USDA 110] Length = 355 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 219/335 (65%), Positives = 279/335 (83%), Gaps = 3/335 (0%) Query: 10 VTRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEAIDRIRNAT 69 ++RR++L A +PL IL+RPASAAEF YKFATGQDP+HPVN RAQEAIDRIR AT Sbjct: 23 ISRRSLLMAATT---VPLCGILTRPASAAEFVYKFATGQDPTHPVNIRAQEAIDRIREAT 79 Query: 70 NGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTGFAFHDYGA 129 +GRLEI+LFPANQLGSDT+L++QVR+GGVEFFNQ++++L+TLVP+AGIVNTGFAF DY + Sbjct: 80 SGRLEIRLFPANQLGSDTELLTQVRSGGVEFFNQSSSILATLVPSAGIVNTGFAFADYDS 139 Query: 130 VWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGLKLRVPAAP 189 VWKAMDG LG ++RAQI K ++ +SK WDNGFRQ+T+S + VR D+K ++RVP AP Sbjct: 140 VWKAMDGDLGTYIRAQIAKTPIMAVSKAWDNGFRQVTSSGREVRTPDDLKNFQIRVPPAP 199 Query: 190 MLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTISNHVWD 249 +LTSLF ALGA PTPINFNEVYS+LQTK+V+GQENPL II+TARLYEVQ C+++ HVWD Sbjct: 200 LLTSLFKALGAGPTPINFNEVYSALQTKVVDGQENPLPIIATARLYEVQSTCSLTGHVWD 259 Query: 250 AYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKGLQIVEADK 309 YWILGN+RAFE+LPKD+QEIV RELD++A D+RADIA S R DL++KGL+ ++ D+ Sbjct: 260 GYWILGNKRAFERLPKDVQEIVTRELDRSAVDQRADIAKLSQSLRADLSTKGLKFIDVDR 319 Query: 310 DSFKEALARANFYKDMRAKFGEDAWKLLEGSVGAL 344 +F++AL++ +FY D + KFGE+AW LE + G L Sbjct: 320 AAFRQALSKTSFYADWKGKFGEEAWSHLEKAAGQL 354 >ref|YP_001889841.1| TRAP dicarboxylate transporter DctP subunit [Burkholderia phytofirmans PsJN] gb|ACD20470.1| TRAP dicarboxylate transporter, DctP subunit [Burkholderia phytofirmans PsJN] Length = 347 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 221/341 (64%), Positives = 281/341 (82%), Gaps = 1/341 (0%) Query: 6 AKKQVTRRNILKAGA-VGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEAIDR 64 A + ++RR+ LKAGA + AA+PL+S+ R +A EFSYK ATGQDP+HPVN RAQEAI+ Sbjct: 7 APQGISRRSFLKAGATLSAAVPLWSVSRRAMAAPEFSYKLATGQDPTHPVNIRAQEAINH 66 Query: 65 IRNATNGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTGFAF 124 IR ATNGRL+IKLFP NQLGSDTDL+SQVRNGGVEFFNQA+++L+TL PAAGIVNTGFAF Sbjct: 67 IREATNGRLDIKLFPQNQLGSDTDLLSQVRNGGVEFFNQASSILATLTPAAGIVNTGFAF 126 Query: 125 HDYGAVWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGLKLR 184 DY AVWKAMDG LG ++R QI K GL+++SK WDNGFRQI++ST+ +R D+KG K+R Sbjct: 127 KDYDAVWKAMDGDLGNYIRGQIGKSGLVSVSKVWDNGFRQISSSTRALRAPADLKGFKIR 186 Query: 185 VPAAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTIS 244 VP APMLTSLF AL A P PINFNE+YS+LQT +VEGQENPL II+TA+LYEVQK+ +++ Sbjct: 187 VPQAPMLTSLFKALDAGPAPINFNELYSALQTGVVEGQENPLPIIATAKLYEVQKYISLT 246 Query: 245 NHVWDAYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKGLQI 304 +HVWD YWILGNR A+E+LP +++ IV RE +KAA +RADIA SG R+DL +KG+ Sbjct: 247 SHVWDGYWILGNRAAWERLPAEMRTIVTREFEKAAMLQRADIAKLSGSLRDDLKAKGITF 306 Query: 305 VEADKDSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 ++ D++SF+ ALA+ +FY D ++K+G++AW LLE SVG LG Sbjct: 307 IDVDRESFRAALAKTSFYHDWKSKYGDEAWGLLEKSVGKLG 347 >ref|YP_001239281.1| putative TRAP-type C4-dicarboxylate transport system periplasmic protein [Bradyrhizobium sp. BTAi1] gb|ABQ35375.1| putative TRAP-type C4-dicarboxylate transport system, periplasmic component [Bradyrhizobium sp. BTAi1] Length = 337 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 218/339 (64%), Positives = 267/339 (78%), Gaps = 3/339 (0%) Query: 7 KKQVTRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEAIDRIR 66 +K TRR ++ A A ALP +SR A AAEF+ K ATGQDPSHPVNKRA+EA DRI+ Sbjct: 2 RKGTTRRQLITAAA---ALPFTFAISRYAKAAEFTMKLATGQDPSHPVNKRAREAADRIK 58 Query: 67 NATNGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTGFAFHD 126 +A+ GRLEI L+PANQLGSDTDL+SQVR G V+ N A++VL+T VP AGIVNTGFAF Sbjct: 59 DASGGRLEINLYPANQLGSDTDLISQVRVGAVDAINIASSVLATRVPLAGIVNTGFAFSS 118 Query: 127 YGAVWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGLKLRVP 186 Y VWKAMDG LG H+R IEK G + +SKPWDNGFRQ+T+ST+ +R D+K K+RVP Sbjct: 119 YDQVWKAMDGSLGDHIRKDIEKTGAIALSKPWDNGFRQVTSSTREIRTPDDLKSFKIRVP 178 Query: 187 AAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTISNH 246 AAP+LTSLF ALGA PTPINFNEVY+SLQTK+VEGQENPL II+TA+LYEVQK+C++++H Sbjct: 179 AAPILTSLFQALGAGPTPINFNEVYTSLQTKVVEGQENPLPIIATAKLYEVQKYCSLTSH 238 Query: 247 VWDAYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKGLQIVE 306 VWDAYWIL NR AF +LP D+Q IV RE + +A DERADIAA S R DLA+KG V+ Sbjct: 239 VWDAYWILCNRAAFTRLPADLQAIVTREFNASADDERADIAALSQSLRADLAAKGFTFVD 298 Query: 307 ADKDSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 DK +F+ AL +++FYKD R KFGE+AW +L+ +VG LG Sbjct: 299 VDKTAFRAALGKSSFYKDWRGKFGEEAWTILQSNVGELG 337 >ref|YP_001206706.1| putative TRAP-type C4-dicarboxylate transport system binding periplasmic protein DctP [Bradyrhizobium sp. ORS 278] emb|CAL78489.1| putative TRAP-type C4-dicarboxylate transport system, periplasmic component (dctP-like) [Bradyrhizobium sp. ORS 278] Length = 340 Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust. Identities = 217/339 (64%), Positives = 267/339 (78%), Gaps = 2/339 (0%) Query: 7 KKQVTRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEAIDRIR 66 +K TRR + VGAA+ F+ SR A AAEF+ K ATGQDPSHPVNKRA+EA DRI+ Sbjct: 4 RKGTTRRRFMAGAMVGAAVLPFT--SRFAKAAEFTMKLATGQDPSHPVNKRAREAADRIK 61 Query: 67 NATNGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTGFAFHD 126 A+ GRLEI ++PANQLGSDTDL+SQVR G V+ N +++VL+T VP AGIVNTGFAF Sbjct: 62 EASGGRLEINIYPANQLGSDTDLISQVRVGAVDAINISSSVLATRVPLAGIVNTGFAFTS 121 Query: 127 YGAVWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGLKLRVP 186 Y VWKAMDG LG H+R IEK G + +SKPWDNGFRQ+T+ST+ ++ D+K K+RVP Sbjct: 122 YDQVWKAMDGSLGDHIRKDIEKTGAIALSKPWDNGFRQVTSSTREIKTPDDLKSFKIRVP 181 Query: 187 AAPMLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTISNH 246 AAP+LTSLF ALGA PTPINFNEVY+SLQTK+VEGQENPL II+TA+LYEVQK+C++++H Sbjct: 182 AAPILTSLFQALGAGPTPINFNEVYTSLQTKVVEGQENPLPIIATAKLYEVQKYCSLTSH 241 Query: 247 VWDAYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKGLQIVE 306 VWDAYWILGNR A KLP D+Q +V +E K+A DERADIAA S R DLA+KG V+ Sbjct: 242 VWDAYWILGNRAALGKLPSDLQVLVTQEFGKSADDERADIAALSQSLRADLAAKGFTFVD 301 Query: 307 ADKDSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 DK++F+ AL + +FYKD R KFGEDAWK+L+ +VG LG Sbjct: 302 VDKEAFRTALGKTSFYKDWRGKFGEDAWKILQSNVGELG 340 >ref|YP_003450538.1| TRAP dicarboxylate transporter [Azospirillum sp. B510] dbj|BAI73994.1| TRAP dicarboxylate transporter [Azospirillum sp. B510] Length = 346 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 209/335 (62%), Positives = 263/335 (78%), Gaps = 3/335 (0%) Query: 11 TRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEAIDRIRNATN 70 +RR +L A AA+PL +IL PA AAEF +K+ATGQDP+HPVN RAQEAI+RIR AT+ Sbjct: 15 SRRTVL---AAAAAMPLVTILKHPADAAEFQFKYATGQDPTHPVNIRAQEAINRIREATS 71 Query: 71 GRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTGFAFHDYGAV 130 GRL+IKLFPANQLGSDTDL+ QVRNGGVE FN ++ +L+T VP +GI + GFAF DYGAV Sbjct: 72 GRLDIKLFPANQLGSDTDLLGQVRNGGVEIFNLSSLILATFVPLSGITSMGFAFKDYGAV 131 Query: 131 WKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGLKLRVPAAPM 190 W+AMDG LG HVR +I K + T+SK WDNGFR +T+ST+ +R D+KG K+RVP AP Sbjct: 132 WQAMDGALGKHVRDEIAKTPIFTLSKIWDNGFRHVTSSTRVIRTPEDIKGFKMRVPPAPA 191 Query: 191 LTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTISNHVWDA 250 LTSLF A+GA+P PINFNE+YS+LQT +VEGQENPLAII+T RLYEVQK C+++ HVWD Sbjct: 192 LTSLFKAIGAAPAPINFNELYSALQTTVVEGQENPLAIIATTRLYEVQKSCSLTAHVWDG 251 Query: 251 YWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKGLQIVEADKD 310 YW+LGN+RAF +LP DIQ IV RELD++A D+RADIAA + + DLA+KGL D++ Sbjct: 252 YWVLGNKRAFARLPADIQGIVSRELDRSADDQRADIAALAESLKTDLAAKGLSFHGVDRE 311 Query: 311 SFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 F++AL+ NFY + + K+G AW+LLE G LG Sbjct: 312 PFRQALSTTNFYAEWKGKYGTVAWELLETVTGKLG 346 >ref|YP_001416442.1| TRAP dicarboxylate transporter subunit DctP [Xanthobacter autotrophicus Py2] gb|ABS66785.1| TRAP dicarboxylate transporter, DctP subunit [Xanthobacter autotrophicus Py2] Length = 345 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 212/336 (63%), Positives = 266/336 (79%), Gaps = 4/336 (1%) Query: 10 VTRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEAIDRIRNAT 69 +TRR +L A A A+PL I++R A AAEF+YK ATGQDP+HPVNKRAQEA RI AT Sbjct: 14 LTRRTLLTAAA---AIPLAGIITR-ARAAEFTYKLATGQDPTHPVNKRAQEAAQRILEAT 69 Query: 70 NGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTGFAFHDYGA 129 +GRLEIK+FPANQLGSDTDL++QVR+GGVE FN + ++L+TLVP GIVNTGFAF DY Sbjct: 70 SGRLEIKVFPANQLGSDTDLLTQVRSGGVELFNLSASILATLVPVTGIVNTGFAFPDYDT 129 Query: 130 VWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGLKLRVPAAP 189 VWK++DG LG ++R QI K GL+ K WDNGFRQ+T+ST+ +R D+KG K+RVP AP Sbjct: 130 VWKSVDGGLGTYIREQIAKAGLVAPIKFWDNGFRQVTSSTREIRTPEDMKGFKIRVPPAP 189 Query: 190 MLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTISNHVWD 249 MLTS+F +LGA TPINFNE+YS+LQTK+VEGQENPLAIIS+ARLYEVQK C+++ HVWD Sbjct: 190 MLTSVFKSLGAGATPINFNELYSALQTKVVEGQENPLAIISSARLYEVQKSCSMTGHVWD 249 Query: 250 AYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKGLQIVEADK 309 Y ILGNRRAF LP+D++ I+ RE D++ +DERADIAA S R DL +KG+ ++ D+ Sbjct: 250 GYLILGNRRAFAALPEDLRTILVREFDRSGADERADIAALSQSLRADLTAKGITFIDVDR 309 Query: 310 DSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 + F++ LA +FY D RAK+G +AW LLE SVG LG Sbjct: 310 EPFRKTLAETSFYADWRAKYGNEAWSLLEASVGKLG 345 >ref|YP_002499559.1| TRAP dicarboxylate transporter subunit DctP [Methylobacterium nodulans ORS 2060] gb|ACL59256.1| TRAP dicarboxylate transporter, DctP subunit [Methylobacterium nodulans ORS 2060] Length = 338 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 209/335 (62%), Positives = 263/335 (78%), Gaps = 3/335 (0%) Query: 10 VTRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEAIDRIRNAT 69 ++RR +L AGA A+LPL +IL RPA+AAEF YK ATGQDP+HPVN RAQEA++RIR A+ Sbjct: 6 LSRRTLL-AGA--ASLPLVTILRRPANAAEFEYKLATGQDPTHPVNLRAQEALNRIREAS 62 Query: 70 NGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTGFAFHDYGA 129 GRL+IKLFPANQLGSDTDL+SQVRNG VEFFN + ++L+T +PAA + NTGFAF DY A Sbjct: 63 GGRLDIKLFPANQLGSDTDLLSQVRNGSVEFFNLSTSILATFIPAASLPNTGFAFKDYDA 122 Query: 130 VWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGLKLRVPAAP 189 VW AMDG LG ++R QI K + T+SK WDNGFR IT+ST+ +R D+KG K+RVP AP Sbjct: 123 VWAAMDGGLGNYIREQIAKTPIQTVSKAWDNGFRHITSSTREIRTPEDLKGFKIRVPPAP 182 Query: 190 MLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTISNHVWD 249 MLTSLF AL A P+NFNE+YS+LQTK+ EGQENPLAI +T RLYEVQK C+++ HVWD Sbjct: 183 MLTSLFKALEAGAAPLNFNELYSALQTKIFEGQENPLAITATTRLYEVQKSCSLTGHVWD 242 Query: 250 AYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKGLQIVEADK 309 YWILGN+RAF++LP+D++ +V RELD++A D+RADI S R +L +KG+ +E ++ Sbjct: 243 GYWILGNKRAFQRLPEDLRALVTRELDRSADDQRADIVRLSASLRQELTAKGITFIEVNR 302 Query: 310 DSFKEALARANFYKDMRAKFGEDAWKLLEGSVGAL 344 D F++AL R FYKD RAKFG+ AW LE G L Sbjct: 303 DPFRDALGRTTFYKDWRAKFGDAAWGHLEAVSGKL 337 >ref|YP_001769614.1| TRAP dicarboxylate transporter subunit DctP [Methylobacterium sp. 4-46] gb|ACA17180.1| TRAP dicarboxylate transporter, DctP subunit [Methylobacterium sp. 4-46] Length = 337 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 208/336 (61%), Positives = 262/336 (77%), Gaps = 3/336 (0%) Query: 10 VTRRNILKAGAVGAALPLFSILSRPASAAEFSYKFATGQDPSHPVNKRAQEAIDRIRNAT 69 ++RR +L AGA A++PL ++L RPA+AAEF YK ATGQDP+HPVN RAQEA++RIR A+ Sbjct: 5 LSRRTLL-AGA--ASIPLVTVLRRPANAAEFEYKLATGQDPTHPVNIRAQEALNRIREAS 61 Query: 70 NGRLEIKLFPANQLGSDTDLMSQVRNGGVEFFNQANTVLSTLVPAAGIVNTGFAFHDYGA 129 NGRL+IKLFPANQLGSDTDL+SQVRNG VEFFN + ++L+T V AA + NTGFAF DY A Sbjct: 62 NGRLDIKLFPANQLGSDTDLLSQVRNGSVEFFNLSTSILATFVAAASLPNTGFAFKDYTA 121 Query: 130 VWKAMDGPLGAHVRAQIEKVGLLTMSKPWDNGFRQITTSTKPVRNAGDVKGLKLRVPAAP 189 VW AMDG LGA++R QI K + +SK WDNGFR IT+ST+ +R D+KG K+RVP AP Sbjct: 122 VWAAMDGGLGAYIRDQIAKTPIQAVSKVWDNGFRHITSSTREIRTPEDLKGFKIRVPPAP 181 Query: 190 MLTSLFSALGASPTPINFNEVYSSLQTKLVEGQENPLAIISTARLYEVQKFCTISNHVWD 249 MLTSLF AL A P+NFNE+YS+LQTK+ EGQENPLAI +T RLYEVQK C+++ HVWD Sbjct: 182 MLTSLFKALDAGAAPLNFNELYSALQTKIFEGQENPLAITATTRLYEVQKSCSLTGHVWD 241 Query: 250 AYWILGNRRAFEKLPKDIQEIVRRELDKAASDERADIAAFSGFARNDLASKGLQIVEADK 309 YWILGN+RA ++LP+D++ +V RELDK+A D+RADI + R DL +KG+ +E D+ Sbjct: 242 GYWILGNKRAVQRLPEDLRALVTRELDKSADDQRADILRLNTTLRQDLTAKGITFIEVDR 301 Query: 310 DSFKEALARANFYKDMRAKFGEDAWKLLEGSVGALG 345 + F++AL R FYKD RAKFG+ AW LE G L Sbjct: 302 EPFRDALGRTTFYKDWRAKFGDAAWGHLEAVSGKLA 337