BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0009.p (477 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06688291.1| conserved hypothetical protein [Achromobacter... 529 e-148 emb|CAQ18489.1| putative dna helicase related protein (partial s... 526 e-147 ref|YP_868895.1| DNA helicase related protein [Shewanella sp. AN... 517 e-144 ref|YP_365127.1| putative ATP-or GTP-binding protein [Xanthomona... 505 e-141 ref|YP_237052.1| DNA helicase related protein [Pseudomonas syrin... 503 e-140 ref|NP_638480.1| DNA helicase related protein [Xanthomonas campe... 501 e-139 gb|ADP96964.1| conserved hypothetical protein [Marinobacter adha... 498 e-139 ref|YP_004474243.1| DNA helicase related protein [Pseudomonas fu... 471 e-131 ref|ZP_06498775.1| DNA helicase related protein [Pseudomonas syr... 442 e-122 ref|ZP_08019642.1| DNA helicase protein [Lautropia mirabilis ATC... 362 1e-97 >ref|ZP_06688291.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gb|EFF74819.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 1081 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 254/441 (57%), Positives = 322/441 (73%), Gaps = 1/441 (0%) Query: 2 NRENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPRL 61 ++E+ VRYWHAVELLQPQ+APKLE R L+ PF +D V PW ADS + +Q +P Sbjct: 11 SQESTVRYWHAVELLQPQAAPKLEKRDSLYLPFLYDTKVGAPVPPWSADSGLAQQLIPPR 70 Query: 62 CVWSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSR-QSGLFSLKFTHDGLAVVDSLVL 120 VWSHTLYAHLYDS+ V +TLK FG DQGY E P R +S LF++KFT DGL V DSLVL Sbjct: 71 RVWSHTLYAHLYDSQSVADTLKQLFGADQGYKEEPKRRESALFAMKFTADGLMVQDSLVL 130 Query: 121 ASEAWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEF 180 +SEAWF+GR L+GQDWT+ F+ Q +R++I+ ++GG I + ++T+++R+ LG+++F Sbjct: 131 SSEAWFLGRALAGQDWTWGFEQDQNALREQIKPLMGGQIGPDVLRELTQIVRRFLGLDDF 190 Query: 181 FGDIDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHD 240 FGD+D+ LRFR PV A+K EQEDDPLNS L DL +VA + +G S+ L QYL RHD Sbjct: 191 FGDLDAMLLRFRCAPVRADKAEQEDDPLNSFFLSDLADVADSLRQGVTSDALHQYLSRHD 250 Query: 241 ESKRLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIV 300 RL LD A P+I +L+PD + GCWP++ H+GLVHSQQ+AVNTIL L DSAG++ Sbjct: 251 PGSRLPLDDDAASLPIIERLVPDHHASGCWPADKHLGLVHSQQLAVNTILHTLADSAGLL 310 Query: 301 GVNGPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLK 360 GVNGPPGTGKTTLLRDLIAAV+ RRADA+A R S F +N +E +D K SC L Sbjct: 311 GVNGPPGTGKTTLLRDLIAAVVTRRADALAELPRASDAFLKNGRESASDGAKQQSCHALS 370 Query: 361 PQLFGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKPAWGLISG 420 LFGFEIVIA SNNGAVENV+LELPQRDK+DE WL + D+F +LG +++ KPAWGL+S Sbjct: 371 SALFGFEIVIAPSNNGAVENVTLELPQRDKIDESWLPDADYFGELGALVSGKPAWGLVSA 430 Query: 421 ALGRKDLRKAFVDGIRYSXSP 441 ALG K RK FVD + +P Sbjct: 431 ALGSKTRRKTFVDRYFHGTAP 451 >emb|CAQ18489.1| putative dna helicase related protein (partial sequence n terminus) [Ralstonia solanacearum MolK2] Length = 640 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 248/438 (56%), Positives = 321/438 (73%) Query: 4 ENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPRLCV 63 E++VRYWHA ELLQPQ+APKL+ R + FFHDVT +LV PW ADS V KQ+LP+ V Sbjct: 5 EDIVRYWHAAELLQPQAAPKLQKRDNDYASFFHDVTVGQLVTPWSADSLVAKQRLPKKRV 64 Query: 64 WSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQSGLFSLKFTHDGLAVVDSLVLASE 123 WSHTL+AHLYDSR V + LK +G DQGY E SR+S LF++KFT DGL V DSLVL+SE Sbjct: 65 WSHTLFAHLYDSRVVADKLKDLYGADQGYKEPQSRESALFAVKFTADGLMVDDSLVLSSE 124 Query: 124 AWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEFFGD 183 AWF+GR L+G+DWT F++ QM +R++I+ ++GG ++AA + +T IR+ LGVE FFG+ Sbjct: 125 AWFLGRALAGKDWTRGFEADQMGLREQIKSLMGGKVSAAVLRGLTEYIRRFLGVEGFFGE 184 Query: 184 IDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHDESK 243 +D +LRFRS P+ ++ ++EDDPLNS +L DL +VA + RG S PL YL +HD Sbjct: 185 MDERRLRFRSTPIQPDRRDKEDDPLNSFLLSDLADVADGLRRGVTSAPLDLYLRKHDPES 244 Query: 244 RLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIVGVN 303 RL LD A PLI QL+P +Y CWP+E H+GLVHSQQ+AVNTI L G++GVN Sbjct: 245 RLHLDDDWASLPLIEQLMPSQYASSCWPAERHLGLVHSQQLAVNTIRTTLAKGEGLLGVN 304 Query: 304 GPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLKPQL 363 GPPGTGKTTLLRDLIA+++ RAD +A R S F N +E+ D + +CF+L P L Sbjct: 305 GPPGTGKTTLLRDLIASIVTDRADVLAGLPRASDAFVANGRENANDGGNSQTCFQLNPAL 364 Query: 364 FGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKPAWGLISGALG 423 FGFEIV+ASSNNGAVENV+LELPQ+DK+DE WL + ++F++ GE+++ KPAW LISGALG Sbjct: 365 FGFEIVVASSNNGAVENVTLELPQKDKIDESWLPDAEYFSEQGELVSGKPAWALISGALG 424 Query: 424 RKDLRKAFVDGIRYSXSP 441 K R+AFVD + P Sbjct: 425 SKSRRQAFVDRYFFGEKP 442 >ref|YP_868895.1| DNA helicase related protein [Shewanella sp. ANA-3] gb|ABK47489.1| DNA helicase related protein [Shewanella sp. ANA-3] Length = 1094 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 248/439 (56%), Positives = 310/439 (70%) Query: 4 ENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPRLCV 63 E++VRYWHAVELLQPQSAPKL+ RS + F H+ + PW S V KQKLP+ V Sbjct: 5 ESIVRYWHAVELLQPQSAPKLKKRSSSYGAFIHNTPIGNPIPPWSTASIVAKQKLPKRRV 64 Query: 64 WSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQSGLFSLKFTHDGLAVVDSLVLASE 123 WSHTL+AH+YDSR++ E LK +G DQGY E R+S LF+ KFT G V DS VL+SE Sbjct: 65 WSHTLFAHIYDSRRITEHLKEVYGADQGYREPQYRESALFAAKFTMTGQFVDDSFVLSSE 124 Query: 124 AWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEFFGD 183 AWF+GRVL+G+DWT F+ Q + D ++ + G +++ + ++T I + +GV FFGD Sbjct: 125 AWFLGRVLTGKDWTRGFEEDQTAIGDHVKVLFEGQVSSGALRELTHWILQYIGVAGFFGD 184 Query: 184 IDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHDESK 243 +D RFRS+PVN NK E EDDPLNS +L DL NVA I +G S PL QYL+RHD Sbjct: 185 MDGHVFRFRSQPVNPNKPESEDDPLNSFLLDDLANVADSIIKGGKSNPLDQYLYRHDARL 244 Query: 244 RLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIVGVN 303 RL +D PLI++L+PD YP CWPSE H+GLVHSQQ+AVNTIL LG+ G++G+N Sbjct: 245 RLQIDNDRESLPLIDRLMPDAYPTSCWPSEQHLGLVHSQQLAVNTILATLGNGQGLLGIN 304 Query: 304 GPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLKPQL 363 GPPGTGKTTLLRDLIA ++ RAD +A+ R S F N +E D K SCFKL P L Sbjct: 305 GPPGTGKTTLLRDLIATIVTSRADVLAKLPRASDGFVRNGREAANDGGKEQSCFKLDPAL 364 Query: 364 FGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKPAWGLISGALG 423 +GFEIV+ASSNNGAVENV+LELPQRDK+DE WL E ++FA+LGE+++ KPAWGLISGALG Sbjct: 365 YGFEIVVASSNNGAVENVTLELPQRDKIDESWLPEAEYFAELGELVSGKPAWGLISGALG 424 Query: 424 RKDLRKAFVDGIRYSXSPF 442 K R FV+ Y PF Sbjct: 425 SKTRRTKFVERYFYGQRPF 443 >ref|YP_365127.1| putative ATP-or GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] emb|CAJ25127.1| putative ATP-or GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 554 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 244/442 (55%), Positives = 310/442 (70%) Query: 1 MNRENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPR 60 M++E++VRYWHAVELLQPQSAPKL+ RS + F H+ ++ +LPW +S + KQ+LP+ Sbjct: 1 MDQESIVRYWHAVELLQPQSAPKLKKRSNPYEAFIHNTPIQRPLLPWTPESIIGKQELPK 60 Query: 61 LCVWSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQSGLFSLKFTHDGLAVVDSLVL 120 +WSHTLYAHLYDSR V E L +G DQGY E R+S +F+ KFT G V DS VL Sbjct: 61 KRIWSHTLYAHLYDSRLVAEKLDAMYGADQGYQEPKFRESAVFAAKFTAGGRLVDDSFVL 120 Query: 121 ASEAWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEF 180 +SEAWF+GRVL+G+DWT F++ Q +R+R G +++ + ++T + LG+ +F Sbjct: 121 SSEAWFLGRVLTGKDWTRGFETDQKTLRERANSQFEGEVSSEGLRELTHWTLQFLGLGDF 180 Query: 181 FGDIDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHD 240 FG++D RFRS+P+ +K E EDDPLNS +L DL +VA I RG SEPL QYL HD Sbjct: 181 FGEMDHHLFRFRSQPIKPDKPESEDDPLNSFLLDDLADVADAISRGVKSEPLDQYLRHHD 240 Query: 241 ESKRLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIV 300 RL +D + A PL+ +L+PD Y CWP+E H+GLVHSQQ+AVNTI L D G++ Sbjct: 241 PKPRLHMDDQRASLPLMGRLMPDAYASSCWPTEHHLGLVHSQQLAVNTIQSTLADGQGLL 300 Query: 301 GVNGPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLK 360 GVNGPPGTGKTTLLRDLIAA+I RADA+A R S F N +E D K FKL Sbjct: 301 GVNGPPGTGKTTLLRDLIAAIITSRADALANLRRASDAFASNGRESANDGGKQQHSFKLN 360 Query: 361 PQLFGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKPAWGLISG 420 P L+GFEIV+ASSNNGAVENV+LELPQRDK+DE WL E ++FA+LGE+++ KPAWGLISG Sbjct: 361 PALYGFEIVVASSNNGAVENVTLELPQRDKIDESWLPEAEYFAELGELVSGKPAWGLISG 420 Query: 421 ALGRKDLRKAFVDGIRYSXSPF 442 ALG K R FVD Y PF Sbjct: 421 ALGSKSRRNNFVDRYFYGQLPF 442 >ref|YP_237052.1| DNA helicase related protein [Pseudomonas syringae pv. syringae B728a] gb|AAY39014.1| DNA helicase related protein [Pseudomonas syringae pv. syringae B728a] Length = 1087 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 244/442 (55%), Positives = 312/442 (70%) Query: 1 MNRENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPR 60 M++E++VRYWHAVELLQPQSAPKL+ R+ + F HD ++ +LPW +S V +Q LP+ Sbjct: 1 MDQESIVRYWHAVELLQPQSAPKLKKRANRYEAFIHDTLIQRPLLPWTPESIVSQQALPK 60 Query: 61 LCVWSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQSGLFSLKFTHDGLAVVDSLVL 120 +WSHTLYAHLYDSR V E L +G DQGY E R+S +F+ KFT G V DSLVL Sbjct: 61 KRIWSHTLYAHLYDSRLVAEKLDAMYGADQGYQEPRFRESAVFAAKFTMAGRLVDDSLVL 120 Query: 121 ASEAWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEF 180 +SEAWF+GRVL+G+DWT F++ Q +R+R + G +++A + ++T + LG+ +F Sbjct: 121 SSEAWFLGRVLTGKDWTRGFETDQKTVRERANTLFEGEVSSADLRELTHWTLQFLGLGDF 180 Query: 181 FGDIDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHD 240 FG++D RFRS+PV +K E EDDPLNS +L DL +VA I RG SEPL QYL HD Sbjct: 181 FGEMDHHYFRFRSQPVKPDKPESEDDPLNSFLLDDLADVADAISRGVKSEPLDQYLRYHD 240 Query: 241 ESKRLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIV 300 RL +D K A PL+ +L+PD Y CWP+E H+GLVHSQQ+AVNTI L D G++ Sbjct: 241 PELRLHMDDKRASLPLMGRLMPDAYASSCWPTEHHLGLVHSQQLAVNTIQSTLADGQGLL 300 Query: 301 GVNGPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLK 360 GVNGPPGTGKTTLLRDLIAA+I RADA A+ R S F + +E D + F+L Sbjct: 301 GVNGPPGTGKTTLLRDLIAAIITSRADAFAKLRRASDAFASDGREAANDGGRQQYSFRLN 360 Query: 361 PQLFGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKPAWGLISG 420 P L+GFEIV+ASSNNGAVENV+LELPQRDK+D+ WL E ++FA+LGE+++ KPAWGLISG Sbjct: 361 PALYGFEIVVASSNNGAVENVTLELPQRDKIDDSWLPEAEYFAELGELVSDKPAWGLISG 420 Query: 421 ALGRKDLRKAFVDGIRYSXSPF 442 ALG K R FVD Y PF Sbjct: 421 ALGSKARRNKFVDRYFYGQRPF 442 >ref|NP_638480.1| DNA helicase related protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAM42404.1| DNA helicase related protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 1087 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 241/442 (54%), Positives = 309/442 (69%) Query: 1 MNRENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPR 60 M++E+++RYWHAVELLQPQSAPKL+ RS + F HD ++ +LPW +S V KQKLP+ Sbjct: 1 MDQESIIRYWHAVELLQPQSAPKLKKRSNRYEAFIHDTPIQRPLLPWTPESIVSKQKLPK 60 Query: 61 LCVWSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQSGLFSLKFTHDGLAVVDSLVL 120 +WSHTLYAHLYDSR V E L +G DQGY E R+S +F+ KFT G V DS VL Sbjct: 61 KRIWSHTLYAHLYDSRLVAEKLDAMYGADQGYQEPKFRESAVFAAKFTAGGRLVDDSFVL 120 Query: 121 ASEAWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEF 180 +SEAWF+GRVL+G+DWT F++ Q +R+R G +++ + ++T + LG+ +F Sbjct: 121 SSEAWFLGRVLTGKDWTRGFETDQKTLRERANSQFEGEVSSEGLRELTHWTLQFLGLGDF 180 Query: 181 FGDIDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHD 240 FG++D RFRS+P+ +K E EDDPLNS +L DL +V I RG SEPL QYL HD Sbjct: 181 FGEMDHHLFRFRSQPIKPDKPESEDDPLNSFLLDDLADVVDAISRGVKSEPLDQYLRHHD 240 Query: 241 ESKRLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIV 300 RL +D + A PL+ +L+PD Y CWP+E H+GLVHSQQ+AVNTI L D G++ Sbjct: 241 PKPRLHMDDQRASLPLMGRLMPDAYASSCWPTEHHLGLVHSQQLAVNTIQSTLADGHGLL 300 Query: 301 GVNGPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLK 360 GVNGPPGTGKTTLLRDLIAA+I RAD +A+ R S F + +E D K +KL Sbjct: 301 GVNGPPGTGKTTLLRDLIAAIITSRADTLAKLCRASDAFASDGREAANDGGKQQYSYKLN 360 Query: 361 PQLFGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKPAWGLISG 420 P L+GFEIV+ASSNNGAVENV+LELPQRD++DE WL E ++FA+LGE+++ KPAWGLISG Sbjct: 361 PALYGFEIVVASSNNGAVENVTLELPQRDRIDESWLPEAEYFAELGELVSGKPAWGLISG 420 Query: 421 ALGRKDLRKAFVDGIRYSXSPF 442 ALG K R FVD Y PF Sbjct: 421 ALGSKARRNKFVDRYFYGQLPF 442 >gb|ADP96964.1| conserved hypothetical protein [Marinobacter adhaerens HP15] Length = 1091 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 236/442 (53%), Positives = 310/442 (70%) Query: 1 MNRENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPR 60 M +EN+VRYWHAVELLQPQSAPK+E R+ + F H+ ++ PW +S KQ+LP+ Sbjct: 1 MGQENIVRYWHAVELLQPQSAPKVEKRTNSYGAFIHNTPIADVIPPWSEESIAAKQELPK 60 Query: 61 LCVWSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQSGLFSLKFTHDGLAVVDSLVL 120 VWSHTL+AH+YDSR V E L+ FG DQGY E R+S LF+ KF G V DS VL Sbjct: 61 QRVWSHTLFAHVYDSRLVAEQLEKVFGADQGYKEPQHRESALFAAKFNMAGHLVEDSFVL 120 Query: 121 ASEAWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEF 180 +SEAWF+GRVL G+DW+ F+ Q + D+ + +LGG +T + + ++T I +G+ F Sbjct: 121 SSEAWFLGRVLKGKDWSTGFEDDQRAVGDQAKALLGGEVTGSALRELTIWILDYIGISNF 180 Query: 181 FGDIDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHD 240 FGDID RFRS+P+ K E+EDDPLNS +L DL+N+A I +GE S PL +YL +++ Sbjct: 181 FGDIDKKVFRFRSRPIKPQKPEREDDPLNSFMLEDLSNIADSISKGEKSRPLEEYLCQYN 240 Query: 241 ESKRLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIV 300 E RL +D K + LI L+PD YP CWPSE H GLVHSQQ+AVNT L +L G++ Sbjct: 241 ERLRLHVDDKHSSLQLIKSLMPDSYPLSCWPSEQHRGLVHSQQLAVNTTLAKLNSDDGLL 300 Query: 301 GVNGPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLK 360 G+NGPPGTGKTTLLRDLIA+++ RAD +AR R S F + +E+ D K +CFKL Sbjct: 301 GINGPPGTGKTTLLRDLIASIVTSRADVLARLGRASDGFVRDGREEANDGGKKQACFKLD 360 Query: 361 PQLFGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKPAWGLISG 420 +L+GFEIV+ASSNNGAVEN++LELPQRDK+DE WL E ++F++LGE+++ +PAWGLISG Sbjct: 361 SKLYGFEIVVASSNNGAVENITLELPQRDKIDESWLPEAEYFSELGELVSGQPAWGLISG 420 Query: 421 ALGRKDLRKAFVDGIRYSXSPF 442 ALG K R FV+ Y PF Sbjct: 421 ALGSKSRRTKFVERYFYGQRPF 442 >ref|YP_004474243.1| DNA helicase related protein [Pseudomonas fulva 12-X] gb|AEF22149.1| DNA helicase related protein [Pseudomonas fulva 12-X] Length = 1088 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 230/456 (50%), Positives = 306/456 (67%), Gaps = 5/456 (1%) Query: 1 MNRENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPR 60 M + ++VRYWHAVELLQPQ+AP ++ R + F+HD++ + PW A+S V +Q + + Sbjct: 1 MTQASIVRYWHAVELLQPQAAPAIKKRDNNYEAFYHDISAATPITPWAANSAVARQAIRK 60 Query: 61 LCVWSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQSGLFSLKFTHDGLAVVDSLVL 120 VWSHTL+ HLYDSR V L+ +G D+GY E R S LFS+KF G + DSLVL Sbjct: 61 DRVWSHTLFGHLYDSRDVARKLEELYGADEGYKEPQKRDSALFSIKFDASGHMIDDSLVL 120 Query: 121 ASEAWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEF 180 +SEAWF+G+ +S +DWT FD Q +R + + LGG + + ++ +T IRK LG+E+F Sbjct: 121 SSEAWFLGKAMSDKDWTRGFDDDQDTVRAKAKENLGGEVLDSGLIRLTNFIRKFLGLEDF 180 Query: 181 FGDIDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHD 240 FG + R RS P+N + EQEDDPLNS I+ DL +V ++ +G S PL YL HD Sbjct: 181 FGPLSERSHRVRSMPINPRRPEQEDDPLNSFIMNDLADVGDRLAKGITSAPLDGYLSAHD 240 Query: 241 ESKRLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIV 300 SKRL + + LI +L P Y GCWP+EG++GLVHSQQ+AVNTIL +L DS G++ Sbjct: 241 LSKRLHISEDQNSESLIERLSPAHYSKGCWPAEGNLGLVHSQQLAVNTILTQLADSEGLL 300 Query: 301 GVNGPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLK 360 GVNGPPGTGKTTLLRDLIAA++ +RAD +A F RPS F + E + K +KL Sbjct: 301 GVNGPPGTGKTTLLRDLIAAIVTQRADVLATFKRPSEAFLTDGLERANNGGKEQRSYKLN 360 Query: 361 PQLFGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKPAWGLISG 420 P+L+G+EIV+ASSNNGAVENV+LELPQRDK+D+ WL++ D+F++LGE++ KPAWGLIS Sbjct: 361 PKLYGYEIVVASSNNGAVENVTLELPQRDKIDKNWLDDADYFSELGELVTGKPAWGLISS 420 Query: 421 ALGRKDLRKAFVDGIRYSXSPFYLLYGQGGTKFLPA 456 ALG K R FV Y P G G + PA Sbjct: 421 ALGSKAKRSQFVGRFFYGNRP-----GAGTEEAEPA 451 >ref|ZP_06498775.1| DNA helicase related protein [Pseudomonas syringae pv. syringae FF5] Length = 389 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 214/389 (55%), Positives = 275/389 (70%) Query: 1 MNRENVVRYWHAVELLQPQSAPKLEPRSKLHFPFFHDVTYRKLVLPWMADSRVRKQKLPR 60 M++E++VRYWHAVELLQPQSAPKL+ R+ + F HD + ++ +LPW +S V Q+LP+ Sbjct: 1 MDQESIVRYWHAVELLQPQSAPKLKKRANRYEAFIHDTSIQRPLLPWTPESSVSAQELPK 60 Query: 61 LCVWSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQSGLFSLKFTHDGLAVVDSLVL 120 +WSHTLYAHLYDSR V E L +G DQGY E R+S +F+ KFT G V DSLVL Sbjct: 61 KRIWSHTLYAHLYDSRLVAEKLDAMYGADQGYQEPGFRESAVFAAKFTMAGRLVDDSLVL 120 Query: 121 ASEAWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITAATIVDVTRMIRKELGVEEF 180 +SEAWF+GRVL+G+DWT F++ Q +R+R + G +++A + ++T + LG+ +F Sbjct: 121 SSEAWFLGRVLTGKDWTRGFETDQKTVRERANTLFEGEVSSADLRELTHWTLQFLGLGDF 180 Query: 181 FGDIDSFKLRFRSKPVNANKIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLSQYLFRHD 240 FG++D RFRS+PV +K E EDDPLNS +L DL +VA I RG SEPL QYL HD Sbjct: 181 FGEMDHHHFRFRSQPVKPDKPESEDDPLNSFLLDDLADVADAISRGVKSEPLDQYLRYHD 240 Query: 241 ESKRLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKELGDSAGIV 300 RL +D K A PL+ +L+PD Y CWP+E H+GLVHSQQ+AVNTI L D G++ Sbjct: 241 PELRLHVDDKRASLPLMGRLMPDAYASSCWPTEHHLGLVHSQQLAVNTIQSTLADGQGLL 300 Query: 301 GVNGPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKTISCFKLK 360 GVNGPPGTGKTTLLRDLIAA+I RADA A+ R S F + +E D + F+L Sbjct: 301 GVNGPPGTGKTTLLRDLIAAIITSRADAFAKLRRASDAFLSDGREAANDGGRQQYSFRLN 360 Query: 361 PQLFGFEIVIASSNNGAVENVSLELPQRD 389 P L+GFEIV+ASSNNGAVENV+LELPQRD Sbjct: 361 PALYGFEIVVASSNNGAVENVTLELPQRD 389 >ref|ZP_08019642.1| DNA helicase protein [Lautropia mirabilis ATCC 51599] gb|EFV93800.1| DNA helicase protein [Lautropia mirabilis ATCC 51599] Length = 1143 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 193/500 (38%), Positives = 273/500 (54%), Gaps = 71/500 (14%) Query: 1 MN-RENVVRYWHAVELLQPQSAPKLE------PRSKLHFPFFHDVTYRKLVLPWMADSRV 53 MN +E ++RYWHAVELLQP K E P+ + F HD+ PW S Sbjct: 1 MNAQERIIRYWHAVELLQPSQLKKPEDSAGRSPKDE----FVHDIQSSNEPFPWEPGSEA 56 Query: 54 RKQKLP-----------RLCVWSHTLYAHLYDSRKVVETLKTYFGEDQGYNETPSRQ-SG 101 +Q LP ++ W HTLY ++ ++ + + L FG DQGY + R+ S Sbjct: 57 SRQPLPLDEIDKRTGKPKVYTWFHTLYVQIFPTKTITDALDRAFGADQGYRDPAEREYSA 116 Query: 102 LFSLKFTHDGLAVVDSLVLASEAWFIGRVLSGQDWTYDFDSAQMDMRDRIRGMLGGVITA 161 L++ +FTHDG V S L+SEAWF+GR+ SG DW+ DF+ Q +R + L G + Sbjct: 117 LYAAEFTHDGQLVPGSFTLSSEAWFLGRLTSGSDWSKDFNQDQTSIRQQAEARLTGSVNR 176 Query: 162 ATIVDVTRMIRKELGVEEFFGDIDSFKLRFRSKPVNAN---------------------- 199 + ++T + ++ G++ + + LR S+PV Sbjct: 177 QALDELTTFVIQQCGLQTVLSNPEKAVLRSCSRPVEVKGQQHDTISDTAVGVIPAKAAPT 236 Query: 200 --------------------------KIEQEDDPLNSMILRDLTNVASQIHRGEVSEPLS 233 + Q D PLNS +L DL VA + G S+ LS Sbjct: 237 SRPSAHVVADTSKGGGTATGESITRPQPRQSDLPLNSFLLDDLIQVAEAVATGNTSKALS 296 Query: 234 QYLFRHDESKRLDLDGKEAVWPLINQLLPDRYPPGCWPSEGHIGLVHSQQVAVNTILKEL 293 QYL + R + E +++ LLP ++P GCWP+E H GLVH+QQ+A+N IL++L Sbjct: 297 QYLDPNASITRHTIGSAELESAIVDHLLPHKHPTGCWPAEEHRGLVHAQQLAINFILEQL 356 Query: 294 GDSAGIVGVNGPPGTGKTTLLRDLIAAVIVRRADAMARFDRPSHMFQENAKEDVTDEDKT 353 G+ AGI+G+NGPPGTGKTTLLRDL+AA++ +RADA+A+ R S FQ+NAKE K Sbjct: 357 GEGAGILGINGPPGTGKTTLLRDLVAAIVTQRADALAQLPRASDAFQKNAKETGNASGKK 416 Query: 354 ISCFKLKPQLFGFEIVIASSNNGAVENVSLELPQRDKVDELWLEELDHFADLGEILASKP 413 + L+P LFG+EI++ASSNNGAVEN++ ELPQR K+D WL E D+F +LG + + P Sbjct: 417 QNAHPLQPDLFGYEIIVASSNNGAVENITRELPQRSKIDGSWLPEADYFGELGTLTSGAP 476 Query: 414 AWGLISGALGRKDLRKAFVD 433 +W LIS ALG K R F+D Sbjct: 477 SWALISAALGSKSRRSKFID 496