BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0046.p (103 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777307.1| hypothetical protein Hsero_3927 [Herbaspiril... 138 3e-31 ref|YP_001229679.1| hypothetical protein Gura_0900 [Geobacter ur... 112 2e-23 ref|YP_314955.1| hypothetical protein Tbd_1197 [Thiobacillus den... 108 3e-22 ref|YP_003146015.1| hypothetical protein Kkor_0827 [Kangiella ko... 108 4e-22 ref|YP_892438.1| hypothetical protein CFF8240_1283 [Campylobacte... 107 6e-22 ref|YP_002538294.1| hypothetical protein Geob_2848 [Geobacter sp... 105 2e-21 ref|YP_587436.1| hypothetical protein Rmet_5308 [Cupriavidus met... 103 7e-21 ref|NP_952619.1| hypothetical protein GSU1568 [Geobacter sulfurr... 103 1e-20 ref|YP_004213366.1| hypothetical protein Rahaq_2632 [Rahnella sp... 102 2e-20 ref|YP_001951056.1| hypothetical protein Glov_0810 [Geobacter lo... 102 2e-20 >ref|YP_003777307.1| hypothetical protein Hsero_3927 [Herbaspirillum seropedicae SmR1] gb|ADJ65399.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 105 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 93/105 (88%), Positives = 95/105 (90%), Gaps = 2/105 (1%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERSATATAAPAQRPAAPAQ 60 MKCPVCTSQHLLISERQG+EIDYCPQCRGVWLDRGELDKLIERSATATAAPA A Sbjct: 1 MKCPVCTSQHLLISERQGIEIDYCPQCRGVWLDRGELDKLIERSATATAAPAPAQRPAAP 60 Query: 61 --DLRFGHGGYERGEHHGQRHHRGGYGYDAKRKKKGFLGEIFDFD 103 +LRFGHGGYERGEHHGQRHH GGYGYDAKRKKKGFLGEIFDFD Sbjct: 61 AQELRFGHGGYERGEHHGQRHHHGGYGYDAKRKKKGFLGEIFDFD 105 >ref|YP_001229679.1| hypothetical protein Gura_0900 [Geobacter uraniireducens Rf4] gb|ABQ25106.1| Uncharacterized protein-like protein [Geobacter uraniireducens Rf4] Length = 104 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 73/107 (68%), Gaps = 7/107 (6%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERSATATAAPAQRP----A 56 MKCPVCT+ LLI+ERQGVEIDYCPQCRGVWLDRGELDK+IERS + AP Q P A Sbjct: 1 MKCPVCTNVDLLIAERQGVEIDYCPQCRGVWLDRGELDKVIERS---SVAPIQHPLAGMA 57 Query: 57 APAQDLRFGHGGYERGEHHGQRHHRGGYGYDAKRKKKGFLGEIFDFD 103 + + ++ + G H + GYGY ++KKK FL E+FDFD Sbjct: 58 SQHSEPQYPSSQVKHGHDDHHGHKQHGYGYGHQKKKKSFLAEMFDFD 104 >ref|YP_314955.1| hypothetical protein Tbd_1197 [Thiobacillus denitrificans ATCC 25259] gb|AAZ97150.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 92 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/105 (55%), Positives = 74/105 (70%), Gaps = 15/105 (14%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERSATATAAPAQRPAAPAQ 60 M CPVC + L++SERQG+EIDYCPQCRGVWLDRGELDK+I+RS A+AAP+ R AAPA Sbjct: 1 MHCPVCKTVDLVMSERQGIEIDYCPQCRGVWLDRGELDKIIDRS--ASAAPSPREAAPAP 58 Query: 61 DLRFGHGGYERGEHHGQRHHRGG--YGYDAKRKKKGFLGEIFDFD 103 H G H R + G YG+ K++++GFL ++FDFD Sbjct: 59 -----HPG------HAPRPYEGDPRYGHHRKKRREGFLSDLFDFD 92 >ref|YP_003146015.1| hypothetical protein Kkor_0827 [Kangiella koreensis DSM 16069] gb|ACV26247.1| conserved hypothetical protein [Kangiella koreensis DSM 16069] Length = 105 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 3/105 (2%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERSATATAAPAQRPAAPAQ 60 M+CPVC L+++ R+G+EIDYCP+CRGVWLDRGELDK+IERSA A A A P AQ Sbjct: 1 MQCPVCDGADLVMTSREGIEIDYCPKCRGVWLDRGELDKIIERSAPAAAPQATNPQPHAQ 60 Query: 61 DLRFGHGGYERGEHHGQRHHRGGYGYD---AKRKKKGFLGEIFDF 102 + R+ Y+ ++ Q GY + ++KKK LGE+FDF Sbjct: 61 EPRYRDDHYKESKYREQSRAHHGYSDNDHYKRKKKKSLLGELFDF 105 >ref|YP_892438.1| hypothetical protein CFF8240_1283 [Campylobacter fetus subsp. fetus 82-40] ref|ZP_06008937.1| hypothetical protein CfetvA_06651 [Campylobacter fetus subsp. venerealis str. Azul-94] gb|ABK82181.1| hypothetical protein CFF8240_1283 [Campylobacter fetus subsp. fetus 82-40] gb|EGU24365.1| Hypothetical protein CFV354_1387 [Campylobacter fetus subsp. venerealis NCTC 10354] Length = 99 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 5/103 (4%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERS-ATATAAPAQRPAAPA 59 MKCPVC Q+L++SERQGVEIDYCP CRGVWLDRGELDK+IERS A +QR Sbjct: 1 MKCPVCADQNLMMSERQGVEIDYCPSCRGVWLDRGELDKIIERSGAVEPKQNSQREYFDK 60 Query: 60 QDLRFGHGGYERGEHHGQRHHRGGYGYDAKRKKKGFLGEIFDF 102 Q+ + + + R + ++++ GY K+KK+ FL E+FDF Sbjct: 61 QNHKDEYNSH-RDSRYSDKYYQDGY---RKKKKESFLSELFDF 99 >ref|YP_002538294.1| hypothetical protein Geob_2848 [Geobacter sp. FRC-32] gb|ACM21193.1| conserved hypothetical protein [Geobacter sp. FRC-32] Length = 100 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 65/109 (59%), Gaps = 15/109 (13%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERSATATAAPA------QR 54 MKCPVCT+ +LL++ERQGVEIDYCP CRGVWLDRGELDK+++R Q Sbjct: 1 MKCPVCTNVNLLLAERQGVEIDYCPTCRGVWLDRGELDKILDRVGQVPMEQPVPESYRQP 60 Query: 55 PAAPAQDLRFGHGGYERGEHHGQRHHRGGYGYDAKRKKKGFLGEIFDFD 103 P P + GH + GEH GYG+ KKK L EIFDFD Sbjct: 61 PPQPVHHMNHGHNYH--GEH-------KGYGHSRPHKKKSLLSEIFDFD 100 >ref|YP_587436.1| hypothetical protein Rmet_5308 [Cupriavidus metallidurans CH34] gb|ABF12167.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 99 Score = 103 bits (258), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 26/113 (23%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERSATAT-----AAPAQRP 55 MKCP C L++++RQGVEIDYCP+CRGVWLDRGELDK++ERSA AT +AP +RP Sbjct: 1 MKCPTCPDSVLIMADRQGVEIDYCPRCRGVWLDRGELDKILERSAMATPVSQASAPRERP 60 Query: 56 AAPAQDLRFGHGGYERGEHHGQRHHRGGY-------GYDAKRKKKGFLGEIFD 101 A+PA +HG H RGG+ G+ +++K +L E+FD Sbjct: 61 ASPA--------------YHGDDHGRGGHDGYGSRNGHHGNKRRKSWLNELFD 99 >ref|NP_952619.1| hypothetical protein GSU1568 [Geobacter sulfurreducens PCA] gb|AAR34942.1| conserved hypothetical protein [Geobacter sulfurreducens PCA] gb|ADI84403.1| conserved hypothetical protein [Geobacter sulfurreducens KN400] Length = 97 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 16/107 (14%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERS------ATATAAPAQR 54 MKCPVCT+ +L++SERQG+EIDYCP+CRGVWLDRGELDK+IER+ AT + PA + Sbjct: 1 MKCPVCTTVNLVMSERQGIEIDYCPECRGVWLDRGELDKIIERTQTKETAATHSPQPAAQ 60 Query: 55 PAAPAQDLRFGHGGYERGEHHGQRHHRGGYGYDAKRKKKGFLGEIFD 101 PA Q GY HG + +R KK FL E+FD Sbjct: 61 PAYAPQQTGHAPAGYGYSHGHGHKPYR----------KKSFLEELFD 97 >ref|YP_004213366.1| hypothetical protein Rahaq_2632 [Rahnella sp. Y9602] gb|ADW74239.1| hypothetical protein Rahaq_2632 [Rahnella sp. Y9602] Length = 96 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/104 (52%), Positives = 67/104 (64%), Gaps = 11/104 (10%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERSATATAAPAQRPAAPAQ 60 M+CPVC L++SERQG+EIDYCP CRGVWLDRGELDK+IE+SAT A A+RPA Sbjct: 1 MQCPVCKESQLVMSERQGIEIDYCPDCRGVWLDRGELDKIIEKSATLQA--AERPATARY 58 Query: 61 DLRFGHGGYERGEHH---GQRHHRGGYGYDAKRKKKGFLGEIFD 101 + R +R + H G +RG Y KKK FL E+FD Sbjct: 59 EER------DRRDDHRPQGNYDNRGHYPSQKPYKKKSFLSELFD 96 >ref|YP_001951056.1| hypothetical protein Glov_0810 [Geobacter lovleyi SZ] gb|ACD94536.1| conserved hypothetical protein [Geobacter lovleyi SZ] Length = 96 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/103 (56%), Positives = 70/103 (67%), Gaps = 9/103 (8%) Query: 1 MKCPVCTSQHLLISERQGVEIDYCPQCRGVWLDRGELDKLIERSAT--ATAAPAQRPAAP 58 M CPVC +L++S+RQGVEIDYCP+CRGVWLDRGELDK+IERSA A+A P + AA Sbjct: 1 MHCPVCPETNLVMSDRQGVEIDYCPKCRGVWLDRGELDKIIERSAAQEASAQPVYQQAAQ 60 Query: 59 AQDLRFGHGGYERGEHHGQRHHRGGYGYDAKRKKKGFLGEIFD 101 Q HG H+ +HH G+GY K KKK FL E+FD Sbjct: 61 YQQPPQQHG------HYSDKHHGHGHGYRYK-KKKSFLEELFD 96