BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0038.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777315.1| cytochrome b561 protein [Herbaspirillum sero... 396 e-108 ref|YP_004232714.1| putative cytochrome b561 [Acidovorax avenae ... 229 2e-58 ref|YP_001239852.1| putative cytochrome b561 [Bradyrhizobium sp.... 220 1e-55 ref|YP_004234205.1| cytochrome b/b6 domain-containing protein [A... 220 1e-55 gb|EGH77696.1| putative cytochrome b561 [Pseudomonas syringae pv... 208 4e-52 ref|ZP_06497915.1| putative cytochrome b561 [Pseudomonas syringa... 207 6e-52 ref|YP_001278982.1| cytochrome B561 [Psychrobacter sp. PRwf-1] >... 165 4e-39 gb|EGM18998.1| hypothetical protein PA13_13672 [Pseudomonas aeru... 161 6e-38 ref|YP_790237.1| hypothetical protein PA14_26070 [Pseudomonas ae... 160 8e-38 ref|ZP_07794253.1| putative cytochrome b561 [Pseudomonas aerugin... 160 1e-37 >ref|YP_003777315.1| cytochrome b561 protein [Herbaspirillum seropedicae SmR1] gb|ADJ65407.1| cytochrome b561 protein [Herbaspirillum seropedicae SmR1] Length = 214 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/214 (97%), Positives = 212/214 (99%) Query: 1 MLKNTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIP 60 MLKNT ERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIP Sbjct: 1 MLKNTAERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIP 60 Query: 61 LLNIHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTG 120 LLNIHWVLGVSIGVLVVPRLVWRL+NVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTG Sbjct: 61 LLNIHWVLGVSIGVLVVPRLVWRLINVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTG 120 Query: 121 YLNTYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVAL 180 YLNTYDPTNFGLF+IPAFRETALFAWIA+TWQLTAEQVETPIFAVHKFLGDWVVWVVVAL Sbjct: 121 YLNTYDPTNFGLFIIPAFRETALFAWIANTWQLTAEQVETPIFAVHKFLGDWVVWVVVAL 180 Query: 181 HVAAAIFHHRVRKDATLTRMLPAAWGGQAGQKRD 214 HVAAA FHHRVRKDATLTRMLPAAWGGQAGQKRD Sbjct: 181 HVAAATFHHRVRKDATLTRMLPAAWGGQAGQKRD 214 >ref|YP_004232714.1| putative cytochrome b561 [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44147.1| putative cytochrome b561 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 193 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 113/201 (56%), Positives = 141/201 (70%), Gaps = 13/201 (6%) Query: 3 KNTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLL 62 NT RFG++AK FHW+ A AFI AY+VVYYVIWF+D + +P+L Sbjct: 4 TNTATRFGALAKFFHWTSAAAFIGAYVVVYYVIWFMDDTSDAS-------------LPVL 50 Query: 63 NIHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYL 122 NIHWVLG+ +G LV+PRL+WRL++V+P PG+ LEH LA AHW LY ++ MPLTGY+ Sbjct: 51 NIHWVLGLIVGFLVLPRLLWRLLDVQPEDPPGAPLEHALAHAAHWGLYGLLVAMPLTGYI 110 Query: 123 NTYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHV 182 T PT+FGLF + F ETALFAWI+ T+Q+ E E P+ AVH FLG +V WVVV LHV Sbjct: 111 GTGAPTDFGLFTVTGFNETALFAWISRTFQVGWEAFEAPVDAVHHFLGQFVAWVVVLLHV 170 Query: 183 AAAIFHHRVRKDATLTRMLPA 203 AA+FHHRVR+D LTRMLP Sbjct: 171 GAALFHHRVRRDDVLTRMLPG 191 >ref|YP_001239852.1| putative cytochrome b561 [Bradyrhizobium sp. BTAi1] gb|ABQ35946.1| putative cytochrome b561 [Bradyrhizobium sp. BTAi1] Length = 195 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 110/200 (55%), Positives = 140/200 (70%), Gaps = 13/200 (6%) Query: 4 NTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLLN 63 NT FG++AK FHWS A AFI+AY VVYYVIWF+D + P +P+LN Sbjct: 5 NTKREFGALAKFFHWSSAAAFIVAYAVVYYVIWFMD----------DMAPEA---LPVLN 51 Query: 64 IHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYLN 123 IHWVLG+ +G LV+PRL+WR NV+P P GS +EH+LA +AH LY +IVMPLTGY+ Sbjct: 52 IHWVLGIIVGFLVLPRLLWRFANVQPDPPHGSRVEHVLAHVAHGGLYALLIVMPLTGYIG 111 Query: 124 TYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHVA 183 T T+FGLF +P+FRETA+F WI S + ++ E P+ A+H F+G W+ W VVALHVA Sbjct: 112 TDAATDFGLFKVPSFRETAVFGWIESGLGIDWDRFEPPVDAIHHFVGKWIAWTVVALHVA 171 Query: 184 AAIFHHRVRKDATLTRMLPA 203 AA+FHH VR+D LTRMLP Sbjct: 172 AALFHHLVRRDNVLTRMLPG 191 >ref|YP_004234205.1| cytochrome b/b6 domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX45638.1| Cytochrome b/b6 domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 223 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 110/192 (57%), Positives = 142/192 (73%) Query: 3 KNTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLL 62 +NT + +GS++ LFHW+MA AFI AY V YYVIW +DPETS++P LFG P+ V+P+L Sbjct: 4 RNTLDAYGSVSMLFHWAMAAAFIAAYGVAYYVIWVVDPETSVRPPLFGWAPDAQRVVPIL 63 Query: 63 NIHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYL 122 NIHWVLG++IG LV+PRL+WR+ P P S LE L A AHWALY +I+MP++GY+ Sbjct: 64 NIHWVLGMTIGFLVLPRLLWRIFGTTPRHAPASRLEVLAADAAHWALYALLILMPVSGYM 123 Query: 123 NTYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHV 182 TYDPTNFGLFVIPA R+TA WI S + LT Q+E ++ VH FLG V WV+VALH+ Sbjct: 124 TTYDPTNFGLFVIPACRDTAFAEWIRSLFGLTTLQLEDAMWTVHSFLGKRVAWVLVALHI 183 Query: 183 AAAIFHHRVRKD 194 AA+ HH +R+D Sbjct: 184 GAALMHHFIRRD 195 >gb|EGH77696.1| putative cytochrome b561 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 198 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 113/200 (56%), Positives = 142/200 (71%), Gaps = 13/200 (6%) Query: 3 KNTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLL 62 +N+ FG +AK FHW+ A +FI AYIVVYYVIWF+D +TS + +P+L Sbjct: 4 RNSATCFGGLAKFFHWTSAASFIAAYIVVYYVIWFMD-DTSPES------------LPVL 50 Query: 63 NIHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYL 122 NIHWVLG+ +G LV+PRL+WRL++++P PGSALEH+LA +AH LY MI MPLTGYL Sbjct: 51 NIHWVLGLLVGFLVLPRLLWRLLDMQPDNPPGSALEHILAHVAHGGLYGLMIAMPLTGYL 110 Query: 123 NTYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHV 182 T PT+FGLF + F ET LFAW + T+ L+ E E PI VH FLG WV WVVV+LHV Sbjct: 111 GTGAPTDFGLFSVTGFNETKLFAWFSVTFSLSYEAFEAPIDTVHHFLGKWVAWVVVSLHV 170 Query: 183 AAAIFHHRVRKDATLTRMLP 202 AA+FHH VR+D+ L RMLP Sbjct: 171 LAALFHHLVRRDSVLRRMLP 190 >ref|ZP_06497915.1| putative cytochrome b561 [Pseudomonas syringae pv. syringae FF5] Length = 198 Score = 207 bits (528), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 112/200 (56%), Positives = 142/200 (71%), Gaps = 13/200 (6%) Query: 3 KNTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLL 62 +N+ FG +AK FHW+ A +FI AYIVVYYVIWF+D +TS + +P+L Sbjct: 4 RNSATCFGGLAKFFHWTSAASFIAAYIVVYYVIWFMD-DTSPES------------LPVL 50 Query: 63 NIHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYL 122 NIHWVLG+ +G LV+PRL+WRL++++P PGSALEH+LA ++H LY MI MPLTGYL Sbjct: 51 NIHWVLGLLVGFLVLPRLLWRLLDMQPDNPPGSALEHILAHVSHGGLYGLMIAMPLTGYL 110 Query: 123 NTYDPTNFGLFVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHV 182 T PT+FGLF + F ET LFAW + T+ L+ E E PI VH FLG WV WVVV+LHV Sbjct: 111 GTGAPTDFGLFSVTGFNETKLFAWFSVTFSLSYEAFEAPIDTVHHFLGKWVAWVVVSLHV 170 Query: 183 AAAIFHHRVRKDATLTRMLP 202 AA+FHH VR+D+ L RMLP Sbjct: 171 LAALFHHLVRRDSVLRRMLP 190 >ref|YP_001278982.1| cytochrome B561 [Psychrobacter sp. PRwf-1] gb|ABQ93032.1| cytochrome B561 [Psychrobacter sp. PRwf-1] Length = 196 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 121/202 (59%), Gaps = 16/202 (7%) Query: 2 LKNTTERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPL 61 L+NT +GSIAK HW MA AFI AY+ VY+ WF ET I Sbjct: 3 LRNTRNNYGSIAKWMHWIMAFAFIGAYVAVYFRHWFTVDETPINWTA------------- 49 Query: 62 LNIHWVLGVSIGVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGY 121 L +H GV +G L++ R++WRL N++P PGS L HL A L H+ LY MI+MPLTGY Sbjct: 50 LQLHLSFGVVVGTLIIFRILWRLNNIQPDEEPGSKLAHLSAHLGHFGLYAVMIIMPLTGY 109 Query: 122 LNTY-DPTNFGLFVIPAFRETALFA-WIASTWQLTAEQVETPIFAVHK-FLGDWVVWVVV 178 L D FGLFVIP F T++F +IA TW LT E+ E P +HK +G W+ W++V Sbjct: 110 LGAKVDTEFFGLFVIPRFESTSMFQDFIAPTWNLTYEEFEVPFDFLHKEIVGKWLGWMLV 169 Query: 179 ALHVAAAIFHHRVRKDATLTRM 200 H+ AA++HH V+KD T+ +M Sbjct: 170 VGHILAALYHHYVKKDRTIIKM 191 >gb|EGM18998.1| hypothetical protein PA13_13672 [Pseudomonas aeruginosa 138244] Length = 193 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 91/189 (48%), Positives = 123/189 (65%), Gaps = 13/189 (6%) Query: 13 AKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLLNIHWVLGVSI 72 +L HWSMA FI A ++ Y+VIW + + + +P+LN+HWVLG+ + Sbjct: 12 TRLLHWSMAFCFIGAIVLAYFVIWVLGHDHPQR-------------LPVLNLHWVLGLLV 58 Query: 73 GVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYLNTYDPTNFGL 132 G+L++PR+V RL VPG+ LEH LA AH +LY M+VMPLTGY+ T PT+FGL Sbjct: 59 GLLLIPRIVSRLRGPRLPAVPGTPLEHRLAHYAHLSLYALMLVMPLTGYVGTRLPTDFGL 118 Query: 133 FVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHVAAAIFHHRVR 192 FV+P+F++TALFAWI+ TW L+ E E P AVH+ +G W+ VV LH AA +H VR Sbjct: 119 FVVPSFKDTALFAWISQTWNLSWEAFEKPFDAVHRMVGLWLSTSVVLLHALAAGYHQWVR 178 Query: 193 KDATLTRML 201 +D TL RML Sbjct: 179 RDGTLERML 187 >ref|YP_790237.1| hypothetical protein PA14_26070 [Pseudomonas aeruginosa UCBPP-PA14] ref|ZP_04934922.1| hypothetical protein PA2G_02302 [Pseudomonas aeruginosa 2192] gb|ABJ12174.1| putative cytochrome b561 [Pseudomonas aeruginosa UCBPP-PA14] gb|EAZ59041.1| hypothetical protein PA2G_02302 [Pseudomonas aeruginosa 2192] gb|EGM18732.1| hypothetical protein PA15_15806 [Pseudomonas aeruginosa 152504] Length = 193 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 91/189 (48%), Positives = 123/189 (65%), Gaps = 13/189 (6%) Query: 13 AKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLLNIHWVLGVSI 72 +L HWSMA FI A ++ Y+VIW + + + +P+LN+HWVLG+ + Sbjct: 12 TRLLHWSMAFCFIGAIVLAYFVIWVLGHDHPQR-------------LPVLNLHWVLGLLV 58 Query: 73 GVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYLNTYDPTNFGL 132 G+L++PR+V RL VPG+ LEH LA AH +LY M+VMPLTGY+ T PT+FGL Sbjct: 59 GLLLIPRIVSRLRGPRLPAVPGTPLEHRLAHYAHLSLYALMLVMPLTGYVGTRLPTDFGL 118 Query: 133 FVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHVAAAIFHHRVR 192 FV+P+F++TALFAWI+ TW L+ E E P AVH+ +G W+ VV LH AA +H VR Sbjct: 119 FVVPSFKDTALFAWISQTWNLSWEAFEKPFDAVHRVVGLWLSTSVVLLHALAAGYHQWVR 178 Query: 193 KDATLTRML 201 +D TL RML Sbjct: 179 RDGTLERML 187 >ref|ZP_07794253.1| putative cytochrome b561 [Pseudomonas aeruginosa 39016] gb|EFQ39349.1| putative cytochrome b561 [Pseudomonas aeruginosa 39016] dbj|BAK90883.1| hypothetical protein NCGM2_4047 [Pseudomonas aeruginosa NCGM2.S1] Length = 193 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 91/189 (48%), Positives = 122/189 (64%), Gaps = 13/189 (6%) Query: 13 AKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIPLLNIHWVLGVSI 72 +L HWSMA FI A ++ Y+VIW + + + +P+LN+HWVLG+ + Sbjct: 12 TRLLHWSMAFCFIGAIVLAYFVIWVLGHDHPQR-------------LPVLNLHWVLGLLV 58 Query: 73 GVLVVPRLVWRLVNVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTGYLNTYDPTNFGL 132 G+L++PR+V RL VPG+ LEH LA AH +LY M+VMPLTGY+ T PT+FGL Sbjct: 59 GLLLIPRIVSRLREPRLPAVPGTPLEHRLAHYAHLSLYALMLVMPLTGYVGTRLPTDFGL 118 Query: 133 FVIPAFRETALFAWIASTWQLTAEQVETPIFAVHKFLGDWVVWVVVALHVAAAIFHHRVR 192 FV+P+F++TALFAWI+ TW L E E P AVH+ +G W+ VV LH AA +H VR Sbjct: 119 FVVPSFKDTALFAWISQTWNLNWEAFEKPFDAVHRVVGLWLSTSVVLLHALAAGYHQWVR 178 Query: 193 KDATLTRML 201 +D TL RML Sbjct: 179 RDGTLERML 187