BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0007.p (65 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777336.1| multidrug efflux system transmembrane protei... 126 1e-27 gb|EGS58887.1| RND transporter, hydrophobe/amphiphile efflux-1 f... 99 2e-19 gb|EGW61626.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1... 99 3e-19 ref|ZP_08534664.1| cation/multidrug efflux pump [Methylophaga am... 96 2e-18 ref|ZP_03825927.1| multidrug efflux system transmembrane protein... 94 7e-18 ref|YP_532596.1| hydrophobe/amphiphile efflux-1 HAE1 [Rhodopseud... 91 5e-17 ref|YP_004280571.1| hydrophobe/amphiphile efflux-1 HAE1 [Agrobac... 90 1e-16 ref|YP_628375.1| HAE1 family efflux transporter [Myxococcus xant... 87 8e-16 ref|YP_003005079.1| transporter, hydrophobe/amphiphile efflux-1 ... 80 1e-13 ref|YP_004235159.1| hydrophobe/amphiphile efflux-1 (HAE1) family... 77 1e-12 >ref|YP_003777336.1| multidrug efflux system transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65428.1| multidrug efflux system transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 1033 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/65 (100%), Positives = 65/65 (100%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL 60 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL Sbjct: 969 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL 1028 Query: 61 ARKGR 65 ARKGR Sbjct: 1029 ARKGR 1033 >gb|EGS58887.1| RND transporter, hydrophobe/amphiphile efflux-1 family protein [Vibrio cholerae HE-09] Length = 969 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/60 (81%), Positives = 53/60 (88%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL 60 MTSLAF LGVVPLMLASGASAETQRAIGTGVFGGMVSAT+LA+ FVP FFV V+ +RL Sbjct: 894 MTSLAFGLGVVPLMLASGASAETQRAIGTGVFGGMVSATLLAIYFVPAFFVFVMSIQERL 953 >gb|EGW61626.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Dechlorosoma suillum PS] Length = 1046 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/61 (81%), Positives = 55/61 (90%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL 60 MTSLAFALGVVPLMLASGASAETQ AIGTGVFGGM++ATVLAV VPV+FV VL ++RL Sbjct: 971 MTSLAFALGVVPLMLASGASAETQHAIGTGVFGGMITATVLAVFLVPVYFVFVLSLSERL 1030 Query: 61 A 61 A Sbjct: 1031 A 1031 >ref|ZP_08534664.1| cation/multidrug efflux pump [Methylophaga aminisulfidivorans MP] gb|EGL54133.1| cation/multidrug efflux pump [Methylophaga aminisulfidivorans MP] Length = 1039 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/65 (73%), Positives = 54/65 (83%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL 60 MTSLAF LGVVPLMLASGASAETQ AIGTGVFGGM+S T+LAV FVP F+V V+G +RL Sbjct: 969 MTSLAFTLGVVPLMLASGASAETQHAIGTGVFGGMLSGTILAVFFVPAFYVFVIGLQERL 1028 Query: 61 ARKGR 65 + R Sbjct: 1029 SAWRR 1033 >ref|ZP_03825927.1| multidrug efflux system transmembrane protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 1032 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 45/63 (71%), Positives = 52/63 (82%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL 60 MTSLAF LGVVPLM+ASGASAETQ AIGTGVFGGMVS T+LA+ FVPVF+ V+ ++ Sbjct: 969 MTSLAFTLGVVPLMIASGASAETQHAIGTGVFGGMVSGTILAIFFVPVFYFSVMKVVEKF 1028 Query: 61 ARK 63 RK Sbjct: 1029 TRK 1031 >ref|YP_532596.1| hydrophobe/amphiphile efflux-1 HAE1 [Rhodopseudomonas palustris BisB18] gb|ABD88277.1| Hydrophobe/amphiphile efflux-1 HAE1 [Rhodopseudomonas palustris BisB18] Length = 1036 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 46/54 (85%), Positives = 51/54 (94%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVL 54 MTS AFALGVVPLM+A GASAETQ AIGTGVFGGM+SATVLAVLFVPVF+V+V+ Sbjct: 968 MTSFAFALGVVPLMVARGASAETQHAIGTGVFGGMLSATVLAVLFVPVFYVVVM 1021 >ref|YP_004280571.1| hydrophobe/amphiphile efflux-1 HAE1 [Agrobacterium sp. H13-3] gb|ADY68193.1| hydrophobe/amphiphile efflux-1 HAE1 [Agrobacterium sp. H13-3] Length = 1026 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 43/59 (72%), Positives = 52/59 (88%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQR 59 MTSLAF LG+VPL++A GAS+ETQ AIGTG+FGGM+SATVLAV+FVPVF+VLV +R Sbjct: 968 MTSLAFTLGIVPLVIAKGASSETQNAIGTGLFGGMISATVLAVMFVPVFYVLVASLKRR 1026 >ref|YP_628375.1| HAE1 family efflux transporter [Myxococcus xanthus DK 1622] gb|ABF91617.1| efflux transporter, HAE1 family, inner membrane component [Myxococcus xanthus DK 1622] Length = 1046 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 45/59 (76%), Positives = 50/59 (84%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQR 59 MTSLAFALGVVPL++ASGASAETQRAIGTGVFGGMVS TVLA+ VP F+V V +R Sbjct: 970 MTSLAFALGVVPLVVASGASAETQRAIGTGVFGGMVSGTVLAIFLVPAFYVAVRSLLKR 1028 >ref|YP_003005079.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Dickeya zeae Ech1591] gb|ACT07600.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Dickeya zeae Ech1591] Length = 1044 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/62 (85%), Positives = 55/62 (88%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL 60 MTSLAFALGVVPLMLASGASAETQ AIGTGVFGGMVSATVLAV FVPVFFV+V+ QR Sbjct: 969 MTSLAFALGVVPLMLASGASAETQHAIGTGVFGGMVSATVLAVFFVPVFFVVVMEVQQRY 1028 Query: 61 AR 62 R Sbjct: 1029 DR 1030 >ref|YP_004235159.1| hydrophobe/amphiphile efflux-1 (HAE1) family transporter [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46592.1| transporter, hydrophobe/amphiphile efflux-1 (HAE1) family [Acidovorax avenae subsp. avenae ATCC 19860] Length = 1056 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/61 (83%), Positives = 55/61 (90%) Query: 1 MTSLAFALGVVPLMLASGASAETQRAIGTGVFGGMVSATVLAVLFVPVFFVLVLGCAQRL 60 MTSLAFALGVVPLMLASGASAETQ AIGTGVFGGMVS T+LAV FVPVFFV V+G +R+ Sbjct: 969 MTSLAFALGVVPLMLASGASAETQHAIGTGVFGGMVSGTLLAVFFVPVFFVFVMGLQERV 1028 Query: 61 A 61 A Sbjct: 1029 A 1029